View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9557_low_75 (Length: 322)
Name: NF9557_low_75
Description: NF9557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9557_low_75 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 20 - 255
Target Start/End: Complemental strand, 14208793 - 14208558
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14208793 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14208694 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14208693 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14208594 |
T |
|
| Q |
220 |
ctcaatcctaaaaacttcttcagctggcagaaggaa |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
14208593 |
ctcaatcctaaaaacttcttcagctggcagaaggaa |
14208558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14212615 - 14212407
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212615 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14212516 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212515 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14212416 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14212415 |
ctcaatcct |
14212407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14214552 - 14214344
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214552 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14214453 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214452 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14214353 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14214352 |
ctcaatcct |
14214344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14215521 - 14215313
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215521 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14215422 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215421 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14215322 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14215321 |
ctcaatcct |
14215313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14216490 - 14216282
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216490 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14216391 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216390 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14216291 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14216290 |
ctcaatcct |
14216282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14217441 - 14217233
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217441 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14217342 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217341 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14217242 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14217241 |
ctcaatcct |
14217233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14219362 - 14219154
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219362 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14219263 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219262 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14219163 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14219162 |
ctcaatcct |
14219154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14210695 - 14210487
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210695 |
gataagtatctcattgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14210596 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210595 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14210496 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14210495 |
ctcaatcct |
14210487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14211664 - 14211456
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211664 |
gataagtatctcattgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14211565 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211564 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14211465 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14211464 |
ctcaatcct |
14211456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14213584 - 14213376
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14213584 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgcgtttaagggatggtagtgaggc |
14213485 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14213484 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14213385 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14213384 |
ctcaatcct |
14213376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14220331 - 14220123
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220331 |
gataagtatctcattgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14220232 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220231 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14220132 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14220131 |
ctcaatcct |
14220123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14221282 - 14221074
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14221282 |
gataagtatctcatcgaggcttggtgcgtaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14221183 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14221182 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14221083 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14221082 |
ctcaatcct |
14221074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14209744 - 14209536
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209744 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14209645 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209644 |
ttttgtatgcttgggcatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14209545 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14209544 |
ctcaatcct |
14209536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14222251 - 14222043
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222251 |
gataagtatctcatcgaggcttggtgcgtaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
14222152 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222151 |
ttttgtatgcttggcaatgttaggtggttagtttatgacagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
14222052 |
T |
|
| Q |
220 |
ctcaatcct |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
14222051 |
ctcaatcct |
14222043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 14218393 - 14218184
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaa-gacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgagg |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218393 |
gataagtatctcatcgaggcttggtgcggaaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgagg |
14218294 |
T |
|
| Q |
119 |
cttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgta |
218 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218293 |
cttttgtatgcttggcaatgttaggtggttagtttatgatagatagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgta |
14218194 |
T |
|
| Q |
219 |
tctcaatcct |
228 |
Q |
| |
|
|||||||||| |
|
|
| T |
14218193 |
tctcaatcct |
14218184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 38 - 228
Target Start/End: Complemental strand, 14223202 - 14223012
Alignment:
| Q |
38 |
gcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggcttttgtatgcttggcagt |
137 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
14223202 |
gcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggcttttgtatgcttggcaat |
14223103 |
T |
|
| Q |
138 |
gttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtatctcaatcct |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14223102 |
gttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtatctcaatcct |
14223012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 20 - 255
Target Start/End: Complemental strand, 31409011 - 31408776
Alignment:
| Q |
20 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31409011 |
gataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggc |
31408912 |
T |
|
| Q |
120 |
ttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31408911 |
ttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtat |
31408812 |
T |
|
| Q |
220 |
ctcaatcctaaaaacttcttcagctggcagaaggaa |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
31408811 |
ctcaatcctaaaaacttcttcagctggcagaaggaa |
31408776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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