View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9563_low_19 (Length: 344)
Name: NF9563_low_19
Description: NF9563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9563_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 38097625 - 38097697
Alignment:
| Q |
228 |
aaaaagagaaatgcactcacattatcctcnnnnnnnatgatggcaaagccaaaaatgatccaaggatttgatg |
300 |
Q |
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| T |
38097625 |
aaaaagagaaatgcactcacattatcctctttttttatgatggcaaaaccaaaaatgatccaaggatttgatg |
38097697 |
T |
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