View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9564_low_21 (Length: 313)

Name: NF9564_low_21
Description: NF9564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9564_low_21
NF9564_low_21
[»] chr6 (64 HSPs)
chr6 (144-307)||(24729142-24729306)
chr6 (145-307)||(23006624-23006786)
chr6 (145-307)||(23781580-23781742)
chr6 (144-307)||(18172845-18173008)
chr6 (144-307)||(18226793-18226956)
chr6 (144-307)||(17876803-17876966)
chr6 (144-307)||(24719357-24719520)
chr6 (151-307)||(17867027-17867183)
chr6 (144-307)||(32335204-32335367)
chr6 (191-307)||(16463273-16463389)
chr6 (193-307)||(17446273-17446387)
chr6 (189-307)||(19875246-19875364)
chr6 (145-295)||(15395258-15395408)
chr6 (145-307)||(17927155-17927320)
chr6 (152-307)||(23230594-23230749)
chr6 (144-265)||(26185147-26185268)
chr6 (148-307)||(14923800-14923958)
chr6 (151-307)||(25591991-25592150)
chr6 (149-307)||(12347459-12347620)
chr6 (1-100)||(15395480-15395579)
chr6 (144-307)||(25929840-25930006)
chr6 (191-285)||(21034440-21034534)
chr6 (144-307)||(19470029-19470196)
chr6 (144-304)||(24398210-24398367)
chr6 (162-307)||(15551406-15551550)
chr6 (166-307)||(18027307-18027447)
chr6 (144-295)||(20113269-20113424)
chr6 (144-307)||(14883571-14883734)
chr6 (189-307)||(17303893-17304014)
chr6 (151-307)||(14101058-14101218)
chr6 (144-307)||(19623341-19623508)
chr6 (144-303)||(16528672-16528836)
chr6 (144-224)||(19625172-19625252)
chr6 (144-295)||(23296148-23296302)
chr6 (1-103)||(14883759-14883860)
chr6 (144-307)||(15986715-15986883)
chr6 (144-225)||(15301577-15301658)
chr6 (144-224)||(3680475-3680555)
chr6 (187-263)||(31127904-31127980)
chr6 (1-100)||(18173042-18173141)
chr6 (1-100)||(18226660-18226759)
chr6 (257-307)||(16914904-16914954)
chr6 (144-248)||(21624453-21624556)
chr6 (144-307)||(19085520-19085687)
chr6 (144-225)||(24116189-24116270)
chr6 (144-221)||(29917389-29917466)
chr6 (144-224)||(18434900-18434980)
chr6 (30-101)||(25945476-25945547)
chr6 (257-307)||(7763133-7763183)
chr6 (237-307)||(14757836-14757904)
chr6 (243-295)||(17446225-17446276)
chr6 (48-100)||(23006833-23006885)
chr6 (48-100)||(23781479-23781531)
chr6 (144-225)||(13601528-13601610)
chr6 (1-95)||(19875101-19875194)
chr6 (257-307)||(26941916-26941966)
chr6 (144-221)||(13435247-13435324)
chr6 (144-307)||(15478370-15478532)
chr6 (11-100)||(18027499-18027587)
chr6 (240-305)||(24481031-24481095)
chr6 (197-233)||(7811424-7811460)
chr6 (154-221)||(12422636-12422704)
chr6 (189-225)||(12716128-12716164)
chr6 (240-272)||(24471018-24471050)
[»] chr8 (37 HSPs)
chr8 (144-308)||(24679024-24679184)
chr8 (144-307)||(25850622-25850785)
chr8 (144-307)||(17928443-17928605)
chr8 (189-304)||(1210345-1210459)
chr8 (239-305)||(18557486-18557552)
chr8 (1-103)||(25850810-25850911)
chr8 (144-307)||(20256141-20256309)
chr8 (144-307)||(26832430-26832597)
chr8 (144-307)||(15934290-15934458)
chr8 (144-304)||(25163425-25163589)
chr8 (162-307)||(12541054-12541197)
chr8 (145-305)||(43644252-43644416)
chr8 (1-103)||(23192628-23192729)
chr8 (144-225)||(12758452-12758533)
chr8 (237-306)||(17687467-17687535)
chr8 (144-307)||(19956966-19957134)
chr8 (151-307)||(23192411-23192560)
chr8 (144-225)||(16681968-16682050)
chr8 (145-307)||(18772047-18772214)
chr8 (144-225)||(19153388-19153468)
chr8 (144-225)||(19942590-19942671)
chr8 (149-248)||(16376027-16376126)
chr8 (257-307)||(22707802-22707852)
chr8 (1-100)||(1210535-1210627)
chr8 (250-307)||(33052374-33052430)
chr8 (237-295)||(10649927-10649985)
chr8 (151-269)||(19506012-19506130)
chr8 (144-218)||(20383060-20383134)
chr8 (237-294)||(17879149-17879205)
chr8 (246-295)||(18557554-18557602)
chr8 (145-225)||(29692667-29692748)
chr8 (148-217)||(40002584-40002653)
chr8 (189-225)||(17526451-17526487)
chr8 (144-224)||(18679168-18679248)
chr8 (144-224)||(18718357-18718437)
chr8 (189-221)||(21932283-21932315)
chr8 (237-285)||(24498726-24498773)
[»] chr4 (57 HSPs)
chr4 (146-307)||(16325087-16325247)
chr4 (152-307)||(19889571-19889726)
chr4 (144-307)||(13890191-13890354)
chr4 (144-307)||(20571586-20571749)
chr4 (191-307)||(17057700-17057816)
chr4 (152-307)||(13027150-13027305)
chr4 (151-307)||(18473430-18473585)
chr4 (144-307)||(14903004-14903167)
chr4 (144-307)||(2651205-2651368)
chr4 (146-264)||(18773453-18773569)
chr4 (152-307)||(11900555-11900714)
chr4 (166-307)||(7221924-7222064)
chr4 (1-100)||(13890064-13890163)
chr4 (144-307)||(8686029-8686198)
chr4 (151-295)||(13693210-13693352)
chr4 (1-100)||(16325277-16325376)
chr4 (1-92)||(19889770-19889861)
chr4 (144-307)||(10249290-10249456)
chr4 (151-307)||(11915064-11915225)
chr4 (144-307)||(55379666-55379834)
chr4 (144-225)||(37986285-37986367)
chr4 (144-225)||(12600116-12600197)
chr4 (144-307)||(23749880-23750047)
chr4 (144-307)||(41115344-41115512)
chr4 (144-307)||(6641041-6641206)
chr4 (151-300)||(10661760-10661914)
chr4 (151-300)||(10875905-10876059)
chr4 (151-307)||(15014973-15015134)
chr4 (144-225)||(14605578-14605660)
chr4 (237-307)||(32491381-32491450)
chr4 (144-225)||(29681190-29681271)
chr4 (3-67)||(18773318-18773382)
chr4 (25-100)||(13027039-13027114)
chr4 (145-301)||(17788633-17788794)
chr4 (242-305)||(21350790-21350853)
chr4 (237-295)||(24619169-24619226)
chr4 (144-225)||(36470325-36470407)
chr4 (144-248)||(3395006-3395111)
chr4 (144-248)||(19912529-19912634)
chr4 (144-225)||(22089642-22089723)
chr4 (191-307)||(18393983-18394097)
chr4 (189-248)||(16847950-16848009)
chr4 (189-248)||(16852906-16852965)
chr4 (257-307)||(15135203-15135253)
chr4 (257-307)||(16475966-16476015)
chr4 (144-221)||(22676199-22676277)
chr4 (144-224)||(16476053-16476133)
chr4 (151-225)||(16631803-16631878)
chr4 (57-100)||(20571817-20571860)
chr4 (245-295)||(9266801-9266850)
chr4 (192-285)||(17526959-17527051)
chr4 (257-307)||(17539873-17539923)
chr4 (240-286)||(23087197-23087242)
chr4 (235-268)||(12606137-12606170)
chr4 (144-225)||(24628573-24628654)
chr4 (154-221)||(6516854-6516922)
chr4 (154-221)||(55731214-55731282)
[»] chr1 (50 HSPs)
chr1 (147-307)||(18130533-18130696)
chr1 (144-307)||(16233680-16233842)
chr1 (144-307)||(9346139-9346302)
chr1 (191-304)||(23053783-23053896)
chr1 (1-103)||(16233867-16233969)
chr1 (195-307)||(20110499-20110611)
chr1 (144-307)||(26280602-26280763)
chr1 (1-103)||(9346008-9346110)
chr1 (1-100)||(27858015-27858114)
chr1 (151-307)||(26702981-26703136)
chr1 (187-307)||(17017995-17018118)
chr1 (150-307)||(27858144-27858299)
chr1 (145-265)||(21684555-21684675)
chr1 (144-307)||(10756785-10756953)
chr1 (1-103)||(22601326-22601427)
chr1 (151-303)||(12625109-12625265)
chr1 (144-231)||(22601215-22601301)
chr1 (1-99)||(31358567-31358664)
chr1 (144-269)||(18517658-18517781)
chr1 (144-224)||(12283783-12283863)
chr1 (151-307)||(20908779-20908939)
chr1 (230-307)||(8698341-8698417)
chr1 (187-307)||(21192416-21192540)
chr1 (144-224)||(22427977-22428057)
chr1 (257-307)||(17025514-17025564)
chr1 (144-248)||(22202348-22202453)
chr1 (151-224)||(22465449-22465522)
chr1 (162-225)||(14293261-14293325)
chr1 (154-249)||(19214983-19215079)
chr1 (154-221)||(46088360-46088428)
chr1 (191-307)||(18614325-18614446)
chr1 (240-295)||(22639774-22639828)
chr1 (145-286)||(26702702-26702848)
chr1 (237-307)||(31358819-31358888)
chr1 (144-221)||(32786579-32786657)
chr1 (144-225)||(48703624-48703705)
chr1 (189-225)||(7309224-7309260)
chr1 (1-84)||(23549557-23549638)
chr1 (243-295)||(26280554-26280605)
chr1 (1-100)||(2820021-2820119)
chr1 (154-224)||(7745688-7745759)
chr1 (144-174)||(2834018-2834048)
chr1 (257-307)||(12283901-12283951)
chr1 (1-59)||(18517850-18517907)
chr1 (144-225)||(28492920-28493000)
chr1 (144-248)||(30892455-30892559)
chr1 (145-221)||(36133566-36133643)
chr1 (241-269)||(14263931-14263959)
chr1 (237-269)||(23917349-23917381)
chr1 (154-221)||(48570869-48570937)
[»] scaffold0311 (1 HSPs)
scaffold0311 (144-307)||(19440-19603)
[»] chr3 (66 HSPs)
chr3 (144-307)||(16881654-16881817)
chr3 (149-307)||(4243750-4243908)
chr3 (191-307)||(19198508-19198624)
chr3 (146-307)||(22770490-22770652)
chr3 (144-307)||(13410677-13410835)
chr3 (152-307)||(15961260-15961414)
chr3 (162-307)||(14077949-14078094)
chr3 (189-307)||(8729617-8729735)
chr3 (189-307)||(9081504-9081622)
chr3 (144-307)||(21316915-21317078)
chr3 (1-100)||(4243939-4244038)
chr3 (144-307)||(13698766-13698928)
chr3 (1-103)||(13410886-13410988)
chr3 (213-305)||(50721543-50721635)
chr3 (213-305)||(50791214-50791306)
chr3 (190-307)||(27849632-27849747)
chr3 (207-307)||(10851239-10851339)
chr3 (145-307)||(14063619-14063786)
chr3 (144-307)||(17239554-17239720)
chr3 (152-263)||(11078125-11078236)
chr3 (144-307)||(13931357-13931519)
chr3 (144-308)||(20724449-20724618)
chr3 (144-300)||(29952074-29952234)
chr3 (144-300)||(30001228-30001388)
chr3 (144-307)||(23538793-23538961)
chr3 (144-248)||(3238053-3238158)
chr3 (144-248)||(13939257-13939362)
chr3 (255-304)||(16879493-16879542)
chr3 (144-307)||(6252782-6252949)
chr3 (151-307)||(16031964-16032124)
chr3 (144-307)||(12967669-12967837)
chr3 (1-103)||(13698589-13698690)
chr3 (237-307)||(17769588-17769657)
chr3 (237-307)||(19070889-19070958)
chr3 (144-307)||(26418306-26418474)
chr3 (144-307)||(12963716-12963883)
chr3 (152-269)||(16305721-16305838)
chr3 (144-304)||(19249985-19250149)
chr3 (144-224)||(2560547-2560627)
chr3 (242-306)||(14006999-14007063)
chr3 (191-306)||(7833228-7833341)
chr3 (1-100)||(27849460-27849558)
chr3 (194-307)||(12396480-12396596)
chr3 (144-307)||(20645515-20645681)
chr3 (144-231)||(6174697-6174784)
chr3 (1-100)||(8693117-8693214)
chr3 (1-100)||(9044986-9045083)
chr3 (257-307)||(8874750-8874800)
chr3 (144-225)||(12726951-12727033)
chr3 (2-100)||(13931230-13931327)
chr3 (257-307)||(14393635-14393685)
chr3 (144-221)||(25398974-25399052)
chr3 (144-224)||(6090088-6090168)
chr3 (207-307)||(8693570-8693668)
chr3 (207-307)||(9045457-9045555)
chr3 (32-100)||(16305875-16305943)
chr3 (154-221)||(46797115-46797183)
chr3 (189-225)||(49643478-49643514)
chr3 (4-45)||(16879367-16879408)
chr3 (151-224)||(52919833-52919906)
chr3 (243-307)||(932343-932406)
chr3 (237-269)||(1463841-1463873)
chr3 (243-307)||(15848700-15848763)
chr3 (57-101)||(16879403-16879447)
chr3 (1-101)||(16881477-16881577)
chr3 (195-267)||(17697063-17697135)
[»] chr7 (61 HSPs)
chr7 (152-307)||(16308346-16308501)
chr7 (191-307)||(13172985-13173101)
chr7 (152-283)||(16411374-16411505)
chr7 (191-307)||(25687472-25687589)
chr7 (144-299)||(5034652-5034806)
chr7 (146-307)||(19237668-19237833)
chr7 (151-307)||(16105567-16105722)
chr7 (144-307)||(11792267-11792434)
chr7 (245-307)||(5034849-5034911)
chr7 (151-307)||(13261248-13261408)
chr7 (144-224)||(21211264-21211344)
chr7 (144-307)||(41843057-41843224)
chr7 (1-103)||(5034527-5034629)
chr7 (190-307)||(11572797-11572913)
chr7 (189-294)||(18362181-18362285)
chr7 (162-307)||(25806805-25806950)
chr7 (152-307)||(13034470-13034630)
chr7 (190-307)||(7488537-7488657)
chr7 (230-300)||(23125426-23125495)
chr7 (144-307)||(16310540-16310707)
chr7 (144-307)||(16317188-16317354)
chr7 (237-307)||(1878858-1878927)
chr7 (144-222)||(4820844-4820922)
chr7 (144-225)||(44466451-44466533)
chr7 (144-225)||(5001545-5001626)
chr7 (144-225)||(10883890-10883971)
chr7 (151-286)||(13259056-13259195)
chr7 (151-286)||(13266396-13266535)
chr7 (144-225)||(13302218-13302299)
chr7 (1-93)||(23125190-23125280)
chr7 (144-248)||(29936039-29936145)
chr7 (144-224)||(4493932-4494012)
chr7 (237-305)||(12223035-12223102)
chr7 (145-225)||(12367456-12367536)
chr7 (152-224)||(14187054-14187126)
chr7 (144-224)||(33604264-33604344)
chr7 (144-248)||(2914305-2914411)
chr7 (257-307)||(13027534-13027584)
chr7 (144-225)||(13731393-13731475)
chr7 (144-221)||(13879527-13879605)
chr7 (257-307)||(21691835-21691885)
chr7 (144-225)||(13645808-13645889)
chr7 (237-294)||(15304129-15304185)
chr7 (144-225)||(30025292-30025373)
chr7 (144-225)||(39285222-39285303)
chr7 (154-221)||(2266235-2266303)
chr7 (237-295)||(9802665-9802722)
chr7 (237-307)||(11015451-11015519)
chr7 (189-223)||(13027619-13027653)
chr7 (257-307)||(13473130-13473180)
chr7 (57-103)||(16308537-16308583)
chr7 (144-225)||(21284092-21284174)
chr7 (144-225)||(24787718-24787800)
chr7 (237-294)||(10257713-10257769)
chr7 (190-265)||(2501624-2501699)
chr7 (154-221)||(8182327-8182395)
chr7 (1-84)||(9761919-9761999)
chr7 (243-295)||(13172937-13172988)
chr7 (154-221)||(14424884-14424952)
chr7 (189-221)||(15574301-15574333)
chr7 (7-51)||(16308572-16308616)
[»] chr2 (45 HSPs)
chr2 (144-307)||(22382842-22383005)
chr2 (145-307)||(21845520-21845682)
chr2 (144-307)||(22797784-22797947)
chr2 (144-307)||(21911409-21911572)
chr2 (151-307)||(20567527-20567683)
chr2 (195-305)||(10899093-10899203)
chr2 (1-100)||(22797638-22797737)
chr2 (151-295)||(15671165-15671310)
chr2 (144-307)||(23184878-23185045)
chr2 (144-307)||(23596141-23596308)
chr2 (151-265)||(25918144-25918258)
chr2 (144-300)||(18702097-18702258)
chr2 (1-103)||(21845395-21845498)
chr2 (144-307)||(24376463-24376631)
chr2 (145-307)||(26366984-26367150)
chr2 (144-307)||(19539773-19539940)
chr2 (145-307)||(39038217-39038384)
chr2 (189-307)||(41122262-41122384)
chr2 (144-307)||(18431514-18431681)
chr2 (144-225)||(21537848-21537929)
chr2 (195-307)||(24843613-24843728)
chr2 (144-303)||(24838462-24838624)
chr2 (189-307)||(24851239-24851361)
chr2 (146-307)||(22271489-22271656)
chr2 (167-225)||(24778752-24778810)
chr2 (193-294)||(14794386-14794485)
chr2 (144-307)||(25188755-25188923)
chr2 (144-224)||(10010415-10010495)
chr2 (145-225)||(17963929-17964008)
chr2 (144-248)||(22257558-22257663)
chr2 (189-295)||(27296842-27296953)
chr2 (144-225)||(40781833-40781914)
chr2 (152-224)||(28141265-28141337)
chr2 (190-293)||(19320956-19321057)
chr2 (1-100)||(25917943-25918041)
chr2 (144-225)||(20569412-20569494)
chr2 (163-307)||(22682807-22682950)
chr2 (145-225)||(25037923-25038004)
chr2 (144-225)||(25828519-25828599)
chr2 (151-224)||(26623117-26623190)
chr2 (144-221)||(22188768-22188846)
chr2 (144-174)||(38631110-38631140)
chr2 (189-221)||(14580968-14581000)
chr2 (4-100)||(15671360-15671455)
chr2 (189-221)||(28701877-28701909)
[»] scaffold0772 (1 HSPs)
scaffold0772 (162-307)||(1458-1603)
[»] chr5 (45 HSPs)
chr5 (146-307)||(26120437-26120598)
chr5 (144-307)||(20968606-20968768)
chr5 (189-307)||(20567215-20567333)
chr5 (189-307)||(23589123-23589241)
chr5 (144-307)||(39799456-39799619)
chr5 (195-307)||(2156885-2156997)
chr5 (151-307)||(31589557-31589713)
chr5 (144-277)||(26251308-26251441)
chr5 (1-100)||(26120628-26120727)
chr5 (144-307)||(9399227-9399395)
chr5 (187-300)||(17263222-17263334)
chr5 (207-303)||(34637879-34637976)
chr5 (144-307)||(21199612-21199779)
chr5 (144-307)||(25097438-25097605)
chr5 (144-307)||(25155408-25155575)
chr5 (144-307)||(12353406-12353574)
chr5 (144-225)||(643398-643479)
chr5 (144-307)||(7746306-7746473)
chr5 (158-283)||(24019029-24019153)
chr5 (1-103)||(25770442-25770548)
chr5 (144-306)||(13546138-13546300)
chr5 (144-307)||(23880424-23880591)
chr5 (1-103)||(15439528-15439629)
chr5 (144-307)||(21100314-21100482)
chr5 (192-307)||(22586563-22586669)
chr5 (187-307)||(16606917-16607038)
chr5 (144-295)||(22000651-22000806)
chr5 (1-67)||(39799655-39799720)
chr5 (144-221)||(21659571-21659648)
chr5 (144-307)||(23413586-23413753)
chr5 (144-224)||(90122-90202)
chr5 (189-248)||(11993294-11993353)
chr5 (4-55)||(20967250-20967300)
chr5 (1-92)||(31589812-31589902)
chr5 (237-307)||(12078351-12078420)
chr5 (144-222)||(26766536-26766614)
chr5 (144-225)||(26783712-26783793)
chr5 (259-307)||(6498745-6498793)
chr5 (257-309)||(21072846-21072898)
chr5 (154-221)||(33932637-33932705)
chr5 (154-225)||(31117247-31117318)
chr5 (1-100)||(23588948-23589051)
chr5 (237-307)||(34637062-34637131)
chr5 (242-295)||(20567329-20567381)
chr5 (47-100)||(34636906-34636959)
[»] scaffold0273 (1 HSPs)
scaffold0273 (191-307)||(22427-22543)
[»] scaffold0011 (1 HSPs)
scaffold0011 (144-307)||(58927-59090)
[»] scaffold0003 (1 HSPs)
scaffold0003 (152-283)||(86-217)
[»] scaffold0004 (4 HSPs)
scaffold0004 (191-307)||(87819-87935)
scaffold0004 (144-307)||(219602-219769)
scaffold0004 (144-307)||(244861-245029)
scaffold0004 (155-225)||(378214-378284)
[»] scaffold0622 (2 HSPs)
scaffold0622 (144-307)||(3947-4110)
scaffold0622 (144-307)||(2023-2189)
[»] scaffold0758 (2 HSPs)
scaffold0758 (151-307)||(3678-3833)
scaffold0758 (1-103)||(3545-3646)
[»] scaffold0035 (2 HSPs)
scaffold0035 (144-307)||(29158-29324)
scaffold0035 (145-303)||(20054-20217)
[»] scaffold0351 (1 HSPs)
scaffold0351 (151-307)||(9573-9728)
[»] scaffold0201 (1 HSPs)
scaffold0201 (195-307)||(18614-18726)
[»] scaffold0037 (2 HSPs)
scaffold0037 (151-307)||(76615-76774)
scaffold0037 (1-100)||(87126-87225)
[»] scaffold0002 (1 HSPs)
scaffold0002 (151-307)||(111776-111931)
[»] scaffold0020 (1 HSPs)
scaffold0020 (162-307)||(144286-144436)
[»] scaffold0074 (1 HSPs)
scaffold0074 (144-250)||(31134-31240)
[»] scaffold0040 (4 HSPs)
scaffold0040 (213-307)||(4561-4655)
scaffold0040 (144-307)||(2641-2808)
scaffold0040 (1-92)||(6911-7005)
scaffold0040 (151-216)||(6812-6877)
[»] scaffold1281 (1 HSPs)
scaffold1281 (144-307)||(1966-2133)
[»] scaffold0146 (1 HSPs)
scaffold0146 (144-307)||(14480-14646)
[»] scaffold0009 (1 HSPs)
scaffold0009 (144-307)||(268145-268311)
[»] scaffold0078 (1 HSPs)
scaffold0078 (144-304)||(32370-32534)
[»] scaffold0113 (1 HSPs)
scaffold0113 (144-307)||(2593-2761)
[»] scaffold0193 (1 HSPs)
scaffold0193 (148-307)||(16710-16873)
[»] scaffold0025 (1 HSPs)
scaffold0025 (144-307)||(73944-74112)
[»] scaffold0567 (1 HSPs)
scaffold0567 (144-225)||(9268-9349)
[»] scaffold0171 (1 HSPs)
scaffold0171 (144-248)||(28070-28176)
[»] scaffold0047 (1 HSPs)
scaffold0047 (257-307)||(8114-8164)
[»] scaffold0005 (1 HSPs)
scaffold0005 (144-225)||(211718-211800)
[»] scaffold1657 (1 HSPs)
scaffold1657 (144-307)||(1205-1371)
[»] scaffold1747 (1 HSPs)
scaffold1747 (259-307)||(801-849)
[»] scaffold1745 (1 HSPs)
scaffold1745 (259-307)||(562-610)
[»] scaffold0498 (3 HSPs)
scaffold0498 (1-100)||(4034-4132)
scaffold0498 (237-291)||(3862-3915)
scaffold0498 (261-307)||(854-900)
[»] scaffold0324 (1 HSPs)
scaffold0324 (193-307)||(9369-9487)
[»] scaffold0315 (1 HSPs)
scaffold0315 (189-303)||(8067-8185)
[»] scaffold0120 (1 HSPs)
scaffold0120 (144-246)||(37391-37494)
[»] scaffold0064 (1 HSPs)
scaffold0064 (260-307)||(44442-44489)
[»] scaffold0028 (1 HSPs)
scaffold0028 (144-307)||(80758-80926)
[»] scaffold0598 (2 HSPs)
scaffold0598 (257-307)||(2374-2424)
scaffold0598 (151-225)||(2448-2522)
[»] scaffold0084 (2 HSPs)
scaffold0084 (144-225)||(31948-32030)
scaffold0084 (145-225)||(48695-48776)
[»] scaffold0026 (1 HSPs)
scaffold0026 (151-225)||(59449-59523)
[»] scaffold0023 (1 HSPs)
scaffold0023 (144-224)||(102932-103013)
[»] scaffold0022 (1 HSPs)
scaffold0022 (207-307)||(158536-158640)
[»] scaffold0439 (1 HSPs)
scaffold0439 (154-248)||(7384-7480)
[»] scaffold0007 (1 HSPs)
scaffold0007 (189-248)||(63747-63807)
[»] scaffold0479 (1 HSPs)
scaffold0479 (144-225)||(9326-9408)
[»] scaffold0334 (1 HSPs)
scaffold0334 (261-307)||(7308-7354)
[»] scaffold0210 (1 HSPs)
scaffold0210 (144-225)||(1021-1103)
[»] scaffold0081 (1 HSPs)
scaffold0081 (257-307)||(13523-13573)
[»] scaffold0043 (1 HSPs)
scaffold0043 (152-283)||(2370-2502)
[»] scaffold0018 (1 HSPs)
scaffold0018 (242-307)||(7003-7067)
[»] scaffold0092 (1 HSPs)
scaffold0092 (243-307)||(7591-7654)


Alignment Details
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 24729306 - 24729142
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcactttt-aaggagagttcactaaaatcaatatctaactacaat 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||    
T  24729306 cacaaaacaattatacaagttccttccacaatccggaagtagtcttgtcccccttgcactttccaaggagagttcactaaaatcaatatcttattacaat 24729207  T
Q  243 tgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24729206 tgctcaagcacaaaagcaaaagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 24729142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 23006786 - 23006624
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattg 244  Q
    ||||| ||||||||||||||||||||| |||| |||| ||  | |||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||    
T  23006786 acaaagcaattatacaagttccttccataatccggaagtagtcatgtcccccttccactttcaaggagagttcactaaaatcaatatctgattacaattg 23006687  T
Q  245 ctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23006686 ctcaagcaccaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 23006624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 23781580 - 23781742
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattg 244  Q
    ||||| ||||||||||||||||||||| |||| |||| ||  | |||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||    
T  23781580 acaaagcaattatacaagttccttccataatccggaagtagtcatgtcccccttccactttcaaggagagttcactaaaatcaatatctgattacaattg 23781679  T
Q  245 ctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23781680 ctcaagcaccaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 23781742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 18173008 - 18172845
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||||||||||||||||||| |||| ||  | |||||| |||||||||  ||||||||||||||||||||||||||| | |||||||    
T  18173008 cacaaaacaattatacaagttccttccacaatccggaagtagtcatgtcccgcttgcacttccaaggagagttcactaaaatcaatatctgattacaatt 18172909  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  18172908 gctcaagcaccaaagcaagagacttcaaactactcaaacacaaaggcaagaggtttgctatgct 18172845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 18226793 - 18226956
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||||||||||||||||||| |||| ||  | |||||| |||||||||  ||||||||||||||||||||||||||| | |||||||    
T  18226793 cacaaaacaattatacaagttccttccacaatccggaagtagtcatgtcccgcttgcacttccaaggagagttcactaaaatcaatatctgattacaatt 18226892  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  18226893 gctcaagcaccaaagcaagagacttcaaactactcaaacacaaaggcaagaggtttgctatgct 18226956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 17876803 - 17876966
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| ||||||||||||||||||||||||||  ||| ||  |||||| ||||||| |||  |||||| |||||||||||||||||||| | |||||||    
T  17876803 cacaaagcaattatacaagttccttccacaatccagaagtattcttgtcacccttgcccttccaaggagcgttcactaaaatcaatatctgattacaatt 17876902  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17876903 gctcatgcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcatatgct 17876966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 24719520 - 24719357
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| |||||||||||||||  ||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||  | |||||      
T  24719520 cacaaagcaattatacaggttccttccacaatccagaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatcaatatcagattacaaaa 24719421  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24719420 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 24719357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 17867027 - 17867183
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    ||||||||||||||||||||||||||  ||| ||  |||||| ||||||| |||  |||||| |||||||||||||||||||| | |||||||||||| |    
T  17867027 caattatacaagttccttccacaatccagaagtattcttgtcacccttgcccttccaaggagcgttcactaaaatcaatatctgattacaattgctcatg 17867126  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17867127 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcatatgct 17867183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 32335204 - 32335367
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||| |||||||  | ||||||| ||||| ||  ||||||||||||||||||||||||||| | |||||||    
T  32335204 cacaaagcaattatacaggttccttccacaatccggaaatagtcatgtcccctttgcatttccaaggagagttcactaaaatcaatatctgattacaatt 32335303  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  32335304 gctcgagcataaaagcaagagacttcaaactactcaagcacaaaagcaagaggtctcatatgct 32335367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 16463389 - 16463273
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    ||||||||||||||| ||| |||||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  16463389 tcccccttgcactttcaagaagagttcattaaaatcaatatctgattacaatttctcaagcacaaaagcaagagacttcaaactactcaagcacaaacgc 16463290  T
Q  291 aagaggtttcctatgct 307  Q
    |||||||||||||||||    
T  16463289 aagaggtttcctatgct 16463273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 17446387 - 17446273
Alignment:
Q  193 ccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaa 292  Q
    ||||||||||||  ||||||||||||||||||||||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  17446387 ccccttgcacttccaaggagagttcactaaaatcaatatttgattacaatttctcaagcacaaaagcaagagacttcaaactactcaagcacaacagcaa 17446288  T
Q  293 gaggtttcctatgct 307  Q
    |||||||||||||||    
T  17446287 gaggtttcctatgct 17446273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 19875246 - 19875364
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaa 288  Q
    |||||||||| |||||  ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19875246 tgtccccctttcacttccaaggagagttcactaaaatcaatatctgattacaattgctcaagcaccaaagcaagagacttcaaactactcaagcacaaaa 19875345  T
Q  289 gcaagaggtttcctatgct 307  Q
    | |||||| || |||||||    
T  19875346 gaaagagggtttctatgct 19875364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 15395408 - 15395258
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattg 244  Q
    |||||| ||||||||||||||||||||||||| |||| ||  | |||||| |||||||||  |||||||||||||| |||||||||| | | ||||||||    
T  15395408 acaaaaaaattatacaagttccttccacaatccggaagtagtcctgtccctcttgcacttccaaggagagttcacttaaatcaatatatgattacaattg 15395309  T
Q  245 ctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||||| |||||||||||||||||| || |||||||||| | |||||||||    
T  15395308 ctcaagtacaaaagcaagagacttccaaatactcaagcagacaagcaagag 15395258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 17927155 - 17927320
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattg 244  Q
    ||||| |||||||||| ||||||||||||| |||||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||| | ||||| ||    
T  17927155 acaaatcaattatacaggttccttccacaaactggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaactg 17927254  T
Q  245 ctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| ||  |||  |||||||||||||||||||||||| |||||  ||||||| |||||||||||    
T  17927255 ctcaatgctaaaattagcaagagacttcaaactactcaaacacaattgcaagagatttcctatgct 17927320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 152 - 307
Target Start/End: Original strand, 23230594 - 23230749
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    ||||||| | ||||||||||||||| | || ||  ||||||||| ||||||||| || ||||||| |||||||||||||||| | ||||| |||||||||    
T  23230594 aattataaaggttccttccacaatccgaaagtagtcttgtcccctttgcactttcaatgagagtttactaaaatcaatatctgattacaactgctcaagc 23230693  T
Q  252 acaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||| || ||||||| || ||||||||||||||| || ||| |||||||||||    
T  23230694 acaaaagaaaaagacttccaaatactcaagcacaaaaacatgagatttcctatgct 23230749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 26185147 - 26185268
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||| ||| ||||||||||| |||  ||  ||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| |    
T  26185147 cacaaaacaattatacaggttacttccacaatccggatgtagtcttgtcccccttgcactttcaaggagagttcactaaaatcaatatctcattacaaat 26185246  T
Q  244 gctcaagcacaaaagcaagaga 265  Q
    ||||| ||||| ||||||||||    
T  26185247 gctcacgcacacaagcaagaga 26185268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 307
Target Start/End: Complemental strand, 14923958 - 14923800
Alignment:
Q  148 aaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctc 247  Q
    ||||||||||||| ||||||||||||||| |||| ||  | |  | |||||||||||  ||||||||||||||||||||||||||| | ||||| |||||    
T  14923958 aaacaattatacatgttccttccacaatccggaagtagtcattcctcccttgcacttccaaggagagttcactaaaatcaatatctgattacaaatgctc 14923859  T
Q  248 aagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    || |||| ||| ||||||||||||| || ||||||||| |||||| || |||||||||||    
T  14923858 aatcacacaagaaagagacttcaaa-tattcaagcacacaagcaatagatttcctatgct 14923800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 25591991 - 25592150
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca-a 249  Q
    |||||||||| ||||||||||||||| | || ||  ||||||||||||||||||  ||||||||||||||||||| |||  || | ||||||||||||      
T  25591991 caattatacaggttccttccacaatccgaaagtagtcttgtcccccttgcacttccaaggagagttcactaaaataaatcactgattacaattgctcatt 25592090  T
Q  250 gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  25592091 gctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 25592150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 12347459 - 12347620
Alignment:
Q  149 aacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca 248  Q
    |||||||||||| ||||||||||||| | |||| ||  | ||||||| ||||||||  ||||| ||||||||||||||||||||| | |||||||| |||    
T  12347459 aacaattatacaggttccttccacaaaccggaagtagtcctgtccccattgcacttccaaggaaagttcactaaaatcaatatctgattacaattgttca 12347558  T
Q  249 -agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
      || ||||  ||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  12347559 ctgctcaaaatagcaagagacttcaaactactcaagcacaactacaagagatttcctatgct 12347620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15395579 - 15395480
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||||||| |||||| |||||| || || || || |||||||| ||| || |||||||||||||||||||||||||||||    
T  15395579 ttgtgttagctttttcttctttttaaaactaagtctaatgttgagagtttggtagagttcagaatctagaacagagttcagagtcttatgcagcggataa 15395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 25929840 - 25930006
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| |||||||| |||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||| |  |||| |    
T  25929840 cacaaagcaattatacaggttccttcaacaaaccggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatcaatatctgatcacaaat 25929939  T
Q  244 gctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||  || ||||  |||||||||||||||||||| |||| ||||  ||||||| |||||||||||    
T  25929940 gctcactgctcaaaatagcaagagacttcaaactacgcaagtacaactgcaagagatttcctatgct 25930006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 285
Target Start/End: Original strand, 21034440 - 21034534
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcaca 285  Q
    ||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||| ||||||| | |||| ||||||||||||||| ||||    
T  21034440 tcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaattgctcaaacacaaaaccgagaggcttcaaactactcaaacaca 21034534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 19470029 - 19470196
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    ||||||| ||||||||||||||||||||||| | |||| ||  | ||||||||| |||||| |||||||||||||||| |||   |||||| | ||||||    
T  19470029 cacaaaaaaattatacaagttccttccacaaaccggaagtagtcatgtccccctagcacttctaaggagagttcactataatgtgatatctgattacaat 19470128  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  ||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  19470129 tgctcactgctaaaactagcaagagacttcaaactactcaagcacaactacaagagatttcctatgct 19470196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 24398210 - 24398367
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| |||||||||| ||||||||| ||  |||||||||||| |||||| ||| |||| |||||||||||||||| | | ||||| |    
T  24398210 cacaaagcaattatacaggttccttccataatctggaagtagtcttgtccccctttcactttcaagtagag-tcactaaaatcaatatatgattacaaat 24398308  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctat 304  Q
    |||||||||| | ||||||||| ||| || ||||||||||||   ||||||| ||||||||    
T  24398309 gctcaagcac-acagcaagagagttcgaa-tactcaagcacacttgcaagagatttcctat 24398367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 15551406 - 15551550
Alignment:
Q  162 gttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaa 261  Q
    ||||||||||||||| |||| ||  |  |||||||||||||||| ||||||| |||||||||||||   ||| | ||||| |||||||||||| ||||||    
T  15551406 gttccttccacaatccggaagtagtccagtcccccttgcactttcaaggagatttcactaaaatcatgttctgattacaaatgctcaagcacacaagcaa 15551505  T
Q  262 gagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    || |||||||| |||||||||| | || |||||  |||||||||||    
T  15551506 gatacttcaaa-tactcaagcatagaaacaagaaatttcctatgct 15551550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 166 - 307
Target Start/End: Complemental strand, 18027447 - 18027307
Alignment:
Q  166 cttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagaga 265  Q
    |||||||||||||||| ||  |  ||| ||||||||||| |||||||| ||||||| |||| |  ||| | ||||| |||||||||||| ||||||| ||    
T  18027447 cttccacaatctggaagtagtccagtctcccttgcacttctaaggagatttcactataatctaattctgattacaaatgctcaagcacacaagcaaggga 18027348  T
Q  266 cttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||| |||||||||||| ||||||||| |||| ||||||    
T  18027347 cttcaaa-tactcaagcacacaagcaagagatttcatatgct 18027307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 295
Target Start/End: Complemental strand, 20113424 - 20113269
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||| ||||||||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||||| |||||     
T  20113424 cacaaagcaattatacaggttacttccacaaaccggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatgtaatatctaattacaac 20113325  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    ||||||  ||  |||  ||||||||||||||||||||||||||||||  |||||||    
T  20113324 tgctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagag 20113269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 14883734 - 14883571
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||||||||||||||  || ||| || ||||  ||| ||  || |||||||||||||||  ||||||||||||||||||||||||||| | ||||| |    
T  14883734 cacaaaacaattatacatatttctttcaaaatccagaagtagtctggtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaaat 14883635  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | | | ||||| |||||||||||||| ||  ||||||   || ||||||||| |||||||||||    
T  14883634 gtttacgcacacaagcaagagacttccaaaaactcaaatgcacaagcaagagatttcctatgct 14883571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 307
Target Start/End: Complemental strand, 17304014 - 17303893
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca-agcacaaa--agcaagagacttcaaactactcaagcaca 285  Q
    |||| |||||||||||  ||||||||||||||| ||||||||||| | ||||||||||||  || ||||  ||||||||||||||||||||| |||||||    
T  17304014 tgtctcccttgcacttccaaggagagttcactacaatcaatatctgattacaattgctcactgctcaaaatagcaagagacttcaaactactaaagcaca 17303915  T
Q  286 aaagcaagaggtttcctatgct 307  Q
    |  ||||||| |||| ||||||    
T  17303914 actgcaagagatttcatatgct 17303893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 14101218 - 14101058
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattgctc-a 248  Q
    |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||| |||||      
T  14101218 caattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaactgctctc 14101119  T
Q  249 agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||  |||  ||||||||||||||||||||||||||||||  |||||||  ||||||||||    
T  14101118 tgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagacttcctatgct 14101058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 19623341 - 19623508
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  ||||||||||||||||||  |||||| ||| ||||||||  ||||||| | |||||     
T  19623341 cacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcacttccaaggagtgtttactaaaatgtaatatctgattacaac 19623440  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   |||||||||||||||| || ||||||||||  |||||||||||||||||||    
T  19623441 tgctcactgctaaacttagcaagagacttcaaattattcaagcacaactgcaagaggtttcctatgct 19623508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 303
Target Start/End: Original strand, 16528672 - 16528836
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaa 241  Q
    ||||||||||||||||| ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||  ||||||| | |||||    
T  16528672 cacaaaacaattatacaggttccttccacaaaccggaagtcagtcctgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaa 16528771  T
Q  242 ttgctcaagcacaaaa---gcaagagacttcaaactactcaagcacaaaagcaagaggtttccta 303  Q
     ||||||     ||||   ||||||||||||||||||||||||||| |  ||||||| |||||||    
T  16528772 ctgctcactactaaaactagcaagagacttcaaactactcaagcacgactgcaagagatttccta 16528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 19625172 - 19625252
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||||||||||| ||||| |||||| ||  | ||||||||||||||||  ||||||||||||||||||    
T  19625172 cacaaatcaattatacaagttcctttcacaaactggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaa 19625252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 295
Target Start/End: Original strand, 23296148 - 23296302
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  ||||| ||| | ||||||  |||||||||||| |||||||||||||| | || || |    
T  23296148 cacaaagcaattatacaggttccttccacaaaccggaagtattcttgttcccttagcacttccaaggagagttcaataaaatcaatatctgattataaat 23296247  T
Q  244 gctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    | |||  || ||||  | ||||||||||||||||||||||||||||  |||||||    
T  23296248 gttcactgctcaaaataccaagagacttcaaactactcaagcacaactgcaagag 23296302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14883860 - 14883759
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||| | |||||||||||||||||  |||||  ||||||||| ||||||||||||||||| ||  || || |||||||||||| ||||| |||||||    
T  14883860 ttgtgtttgttttttcttctttttaaac-taagtataatgttcagagtctgataaagttcagattcaagaacaaagttcagagtctaatgcaacggataa 14883762  T
Q  101 tgt 103  Q
    |||    
T  14883761 tgt 14883759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 15986715 - 15986883
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaa 241  Q
    |||||| ||||||||||  |||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||  ||||||| | |||||    
T  15986715 cacaaagcaattatacagtttccttccacaaaccggaagtcagtcatgtcccccttgcacttcaaaggagagttcactaaaatgtaatatctgattacaa 15986814  T
Q  242 ttgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  15986815 ctgctcactgctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 15986883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 15301577 - 15301658
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||||| ||||||||||||| |  ||| ||  | ||||||||||||||||  |||||||||||||||||||    
T  15301577 cacaaaacaattatacaggttccttccacaaaccagaagtagacctgtcccccttgcacttccaaggagagttcactaaaat 15301658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 3680475 - 3680555
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||    
T  3680475 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaa 3680555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 31127980 - 31127904
Alignment:
Q  187 cttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaaga 263  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||| | | ||||| |||||||||||| ||| ||||    
T  31127980 cttgtcccccttgaacttccaaggagagttcactaaaatcaatatttgattacaaatgctcaagcacacaagtaaga 31127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18173141 - 18173042
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||  ||||||||| |||| |||| ||||||||  ||| ||  ||||||| |||||||||||| || || |||| |||||||||||||||||||||    
T  18173141 ttgtgttgactttttctttttttaaaaactaagtccagagtttagattctgatagagttcagagtcttgaacaaagtttagagtcttatgcagcggataa 18173042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 18226660 - 18226759
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||  ||||||||| |||| |||| ||||||||  ||| ||  ||||||| |||||||||||| || || |||| |||||||||||||||||||||    
T  18226660 ttgtgttgactttttctttttttaaaaactaagtccagagtttagattctgatagagttcagagtcttgaacaaagtttagagtcttatgcagcggataa 18226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 16914904 - 16914954
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  16914904 agcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 16914954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 21624453 - 21624556
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaat 242  Q
    |||||| |||||||||||||||||||||||| | |||| | |  | ||||||||||||||||  ||||||||||||||  ||  ||||||||| ||||||    
T  21624453 cacaaagcaattatacaagttccttccacaaaccggaagtcagtcctgtcccccttgcacttccaaggagagttcact--aagtaatatctaattacaat 21624550  T
Q  243 tgctca 248  Q
    ||||||    
T  21624551 tgctca 21624556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 19085520 - 19085687
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    |||||| ||||||||||  |||||||||||| | |||| ||   ||||| ||||| |||||  ||||||||||||| |||||  ||||||| | |||||     
T  19085520 cacaaagcaattatacacattccttccacaaaccggaagtagtattgtcgcccttacacttccaaggagagttcaccaaaatgtaatatctgattacaac 19085619  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  19085620 tgctcactgctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 19085687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 24116189 - 24116270
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||| |||||| ||||||||||||| |  ||| ||  | ||||||||||||||||  |||||||||||||||||||    
T  24116189 cacaaaacaagtatacaggttccttccacaaaccagaagtagtcctgtcccccttgcacttccaaggagagttcactaaaat 24116270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 29917389 - 29917466
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||| |||||||||||||||||||||||| | |||| ||  || |||||| ||||||||  |||||||||||||||    
T  29917389 cacaaagcaattatacaagttccttccacaaaccggaagtagtctagtccccgttgcacttccaaggagagttcacta 29917466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 18434900 - 18434980
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| ||||||||||| ||||||||||||   |||| ||  | ||||||||||||||||  ||||||||||||||||||    
T  18434900 cacaaagcaattatacaacttccttccacaaatcggaagtactcctgtcccccttgcacttccaaggagagttcactaaaa 18434980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 25945476 - 25945547
Alignment:
Q  30 taagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataat 101  Q
    |||||||| ||||||| |||||||| |||||||| ||  || || |||||||||||| ||||||||||||||    
T  25945476 taagtccagtgttcagagtctgatagagttcagattcaagaacaaagttcagagtctaatgcagcggataat 25945547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 7763133 - 7763183
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| ||||||    
T  7763133 agcaagagacttcaaactactcaagcacaactgcaagagatttcatatgct 7763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 14757836 - 14757904
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| ||||||||| || ||||||||||||||||| |||||||||||| ||||||||| ||| |||||||    
T  14757836 tacaaatgctcaagc-cacaagcaagagacttcaaa-tactcaagcacacaagcaagagattttctatgct 14757904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 17446276 - 17446225
Alignment:
Q  243 tgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||||||||||||| ||||||||||||| | | ||||||||||||||||||||    
T  17446276 tgctcaagcacaaatgcaagagacttcata-tgctcaagcacaaaagcaagag 17446225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 23006885 - 23006833
Alignment:
Q  48 tctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||| |||||||||||| || || |||| |||||||||||||||||||||    
T  23006885 tctgatagagttcagagtcttgaacaaagtttagagtcttatgcagcggataa 23006833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 23781479 - 23781531
Alignment:
Q  48 tctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||| |||||||||||| || || |||| |||||||||||||||||||||    
T  23781479 tctgatagagttcagagtcttgaacaaagtttagagtcttatgcagcggataa 23781531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 13601528 - 13601610
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| |    | ||||||||||||||||  |||||||||||||||||||    
T  13601528 cacaaagcaattatacaggttccttccacaaaccggaagtcggtcatgtcccccttgcacttccaaggagagttcactaaaat 13601610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19875101 - 19875194
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcg 95  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||| ||  ||||||| | |||| | ||| || || ||||||||||||| |||||||    
T  19875101 ttgtgttagatttttct-ctttttaaaactaattccaatgtttagattctgatataattcaaattcttgaacaaagttcagagtcttgtgcagcg 19875194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 26941916 - 26941966
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||||||||| |||||  ||||||| || ||||||||    
T  26941916 agcaagagacttcaaactactcaatcacaactgcaagagattacctatgct 26941966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 13435247 - 13435324
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||| ||||||| || ||||||||||||| | |||| ||  | | ||||||||||||||  |||||||||||||||    
T  13435247 cacaaagcaattatgcaggttccttccacaaaccggaagtagtcctttcccccttgcacttccaaggagagttcacta 13435324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 15478532 - 15478370
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagtt-cactaaaatcaatatctaactacaat 242  Q
    ||||||||||||||    ||||||||||||||| |||| ||  |  |||||| ||||||||  ||||||| || ||||| |||| | |||| | |||||     
T  15478532 cacaaaacaattatcttggttccttccacaatccggaagtagtccagtcccc-ttgcacttccaaggagattttcactataatcca-atctgattacaaa 15478435  T
Q  243 tgctcaagcaca-aaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||| || |||||||||||||||||| |||||||||| | || | |||| |||||||||||    
T  15478434 tgctcaagcccacaaagcaagagacttcaaa-tactcaagcatacaatctagagatttcctatgct 15478370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 18027587 - 18027499
Alignment:
Q  11 tttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||| ||| ||||| ||| |||||| |||||||| |||||||| | |||| ||  ||||| ||||| ||||| |||||||    
T  18027587 tttttcttcttttt-aaactaagttcaaagttcagagtctgatagagttcagattttggaacaatgttcatagtctaatgcaacggataa 18027499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 24481095 - 24481031
Alignment:
Q  240 aattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatg 305  Q
    ||||||||||||||| ||||||||||||||||| |||||| | | | ||||||||  |||||||||    
T  24481095 aattgctcaagcacacaagcaagagacttcaaa-tactcatggaaacaagcaagatatttcctatg 24481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 7811424 - 7811460
Alignment:
Q  197 ttgcacttttaaggagagttcactaaaatcaatatct 233  Q
    |||||||| |||||||| |||||||||||||||||||    
T  7811424 ttgcacttataaggagatttcactaaaatcaatatct 7811460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 12422636 - 12422704
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| | |||| | || | ||||||||||||||||  |||||||||||||||    
T  12422636 ttatacaggttccttccacaaaccggaagtcactcctgtcccccttgcacttccaaggagagttcacta 12422704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 12716164 - 12716128
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||||  |||||||||||||||||||    
T  12716164 tgtcccccttgcacttccaaggagagttcactaaaat 12716128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 24471050 - 24471018
Alignment:
Q  240 aattgctcaagcacaaaagcaagagacttcaaa 272  Q
    ||||||||||||||| |||||||||||||||||    
T  24471050 aattgctcaagcacacaagcaagagacttcaaa 24471018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 308
Target Start/End: Complemental strand, 24679184 - 24679024
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| |||||||||||||||||||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||| | |||||||    
T  24679184 cacaaagcaattatacaggttccttccacaatctggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaatt 24679085  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgcta 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  24679084 gctcaagcacaaaagcaagagacttcaaactactcaagcacaa----aagaggtttcctatgcta 24679024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 25850785 - 25850622
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||| |||| |   | ||||||||||||||||  || |||||||||||||||| ||||||  | |||||||    
T  25850785 cacaaagcaattatacatgttccttccacaatccggaagttgtcatgtcccccttgcacttccaaagagagttcactaaaattaatatccgattacaatt 25850686  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25850685 actcaagtacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 25850622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 17928443 - 17928605
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| |||||||| |||||| |||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||| | ||||| |    
T  17928443 cacaaagcaattatacatgttccttc-acaatccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaaat 17928541  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||| ||||||||  ||||| || ||||||||||||||| |||||| |||||||||||    
T  17928542 gctcaagcactaaagcaagtcacttccaaatactcaagcacaaaaacaagagatttcctatgct 17928605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 1210459 - 1210345
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaa 288  Q
    |||||| |||||||||  |||||||||||||||||||||  |||| | ||||| |||||||||||| ||||||||||||||||| |||||||||||| ||    
T  1210459 tgtccctcttgcacttccaaggagagttcactaaaatcagaatctgattacaaatgctcaagcacacaagcaagagacttcaaa-tactcaagcacacaa 1210361  T
Q  289 gcaagaggtttcctat 304  Q
    ||||||| ||||||||    
T  1210360 gcaagagatttcctat 1210345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 18557486 - 18557552
Alignment:
Q  239 caattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatg 305  Q
    |||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18557486 caattgcttaagaacaaaagcaagacacttcaaactactcaagcacaaaagcaagaggtttcctatg 18557552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 25850911 - 25850810
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||||||| |||| | | ||| ||| |||||||| |||| ||||||| || ||||||||||||||||||||| |||||||    
T  25850911 ttgtgttagctttttcttctttttaaaactaagac-agtgtccagagtctgatagagtttagagtcttgaacagagttcagagtcttatgcaacggataa 25850813  T
Q  101 tgt 103  Q
    |||    
T  25850812 tgt 25850810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 20256309 - 20256141
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||||||||||||||||| | |||||||  | |||| |||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  20256309 cacaaagcaattatacaagttccttccacaaaccggaaatagtcatgtctcccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 20256210  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaa-aagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  |||||||||||||||||||| |||||||||   ||||||| |||||||||||    
T  20256209 tgctcactgctaaaactagcaagagacttcaaactacccaagcacaacttgcaagagatttcctatgct 20256141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 26832430 - 26832597
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaa-tatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  || |||||||||||||||  || ||||| | |||||     
T  26832430 cacaaagcaattatacaggttccttccacaaacaggaagtagtcctgtcccccttgcacttccaaagagagttcactaaaagaaaatatctgattacaac 26832529  T
Q  243 tgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  26832530 tgctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 26832597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 15934458 - 15934290
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||    ||||||| | |||||    
T  15934458 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaaatgtaatatctgattacaa 15934359  T
Q  242 ttgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||  |||||||||||    
T  15934358 ctgctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagatatttcctatgct 15934290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 25163425 - 25163589
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| |||||||||| || | |||| ||  ||||||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  25163425 cacaaagcaattatacaggttccttccataaaccggaagtagacttgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 25163524  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctat 304  Q
    ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| ||||||||    
T  25163525 tgctcactactaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctat 25163589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 12541054 - 12541197
Alignment:
Q  162 gttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaa 261  Q
    ||||||||||||||| |||| ||  |   ||||||||||||||  ||||||| ||||||| |||| | |||| | ||||| ||||||||||||||||| |    
T  12541054 gttccttccacaatccggaagtagtccaatcccccttgcacttccaaggagatttcactataatcca-atctgattacaaatgctcaagcacaaaagcta 12541152  T
Q  262 gagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||| ||||||||||||| || ||||  |||||||||||    
T  12541153 gagacttcaaa-tactcaagcacaatagaaagatatttcctatgct 12541197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 305
Target Start/End: Original strand, 43644252 - 43644416
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaatt 243  Q
    |||||||||||||||| ||||||||||||||| |||| ||  | || |||||||||| ||  |||||||||||||||||||  ||||||| | ||||| |    
T  43644252 acaaaacaattatacatgttccttccacaatccggaagtagtcctgccccccttgcaattccaaggagagttcactaaaatataatatctgattacaact 43644351  T
Q  244 gctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatg 305  Q
    |||||  ||  |||  | ||||||||||||||||||||||||||||  ||||||| ||| |||||    
T  43644352 gctcactgctaaaaccaacaagagacttcaaactactcaagcacaactgcaagagattttctatg 43644416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23192729 - 23192628
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||| |||||||||||||||||  ||||||||||||| || |||||||| |||||||| ||  || || |||||||||||| |||||| ||||||    
T  23192729 ttgtgttagttttttcttctttttaaac-taagtccaatgtttagagtctgatagagttcagattcaagaacaaagttcagagtctaatgcagtggataa 23192631  T
Q  101 tgt 103  Q
    |||    
T  23192630 tgt 23192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 12758533 - 12758452
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||| |||||||||||||||||||||    
T  12758533 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcactgttaaggagagttcactaaaat 12758452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 17687467 - 17687535
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgc 306  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||| ||||||||||    
T  17687467 tacaattgctcaagcacacaagcaagagacttcaaa-tactcaagcatacaagcaagagatttcctatgc 17687535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 19957134 - 19956966
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| || || | ||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  19957134 cacaaagcaattatacaggttccttccacaaaccggaagtagccctatcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 19957035  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaac-tactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  |||||||||||| |||| ||||||| |||||  ||||||| |||||||||||    
T  19957034 tgctcactgctaaaactagcaagagacttaaaacttactcaatcacaactgcaagagatttcctatgct 19956966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 23192560 - 23192411
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||||||| ||||||||||  |||| ||  | ||||||||||||  ||  ||||||| ||||||||||||||||||| | |||||      | |    
T  23192560 caattatacaagtttcttccacaattcggaagtagtcctgtcccccttgcctttccaaggagaattcactaaaatcaatatctgattacaa------atg 23192467  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| |||||||||||||| || |||||||| ||| ||||||||| |||| ||||||    
T  23192466 cacacaagcaagagacttctaa-tactcaagaacacaagcaagagatttcatatgct 23192411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 16682050 - 16681968
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||||||||||||||| |||||||| |  ||| | || | ||||| |||||||||| ||||||||||||||||||||    
T  16682050 cacaaaacaattatacaagttctttccacaaaccagaagtcactcctgtccaccttgcacttctaaggagagttcactaaaat 16681968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 18772047 - 18772214
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc--aatatctaactacaat 242  Q
    ||||| |||||||||| ||||||| ||||| |  ||| ||  | ||||||||| ||||||  ||||||||||||||||||    ||||||| | |||||     
T  18772047 acaaagcaattatacaggttcctttcacaaaccagaagtagtcctgtccccctcgcacttccaaggagagttcactaaaaaagtaatatctgattacaac 18772146  T
Q  243 tgctcaa-gc--acaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  18772147 tgctcactgctaacactagcaagagacttcaaactactcaagtacaactgcaagagatttcctatgct 18772214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 19153388 - 19153468
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| ||||||||||| |||||||||||| ||| || ||  | ||||||||||||||||  |||||||||||||||||||    
T  19153388 cacaaagcaattatacaacttccttccacaaactg-aagtagtcctgtcccccttgcacttccaaggagagttcactaaaat 19153468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 19942590 - 19942671
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | | || ||  | ||||||||||||||||  |||||||||||||||||||    
T  19942590 cacaaagcaattatacaggttccttccacaaaccgaaagtagtcctgtcccccttgcacttccaaggagagttcactaaaat 19942671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 16376126 - 16376027
Alignment:
Q  149 aacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca 248  Q
    |||||||||| | ||| ||||||||| | |||| ||  | || |||||||||||||  ||||||| ||||||||||||||||||| | ||||| ||||||    
T  16376126 aacaattatataggtttcttccacaaaccggaagtagtcatgacccccttgcacttccaaggagatttcactaaaatcaatatctgattacaactgctca 16376027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 22707802 - 22707852
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||  ||||||| || ||||||||    
T  22707802 agcaagagacttcaaactactcaagcacaactgcaagagattccctatgct 22707852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1210627 - 1210535
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||| ||| ||||||       ||| |||||||| |||||||| ||| || ||  ||||||||||| |||||||||||||    
T  1210627 ttgtgttagctttttcttcttttttaaactaagtc-------cagagtctgatagagttcagattcttgaacaatgttcagagtctaatgcagcggataa 1210535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 33052374 - 33052430
Alignment:
Q  250 gcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||||| |||| ||||||    
T  33052374 gcacacaagcaagagacttcaaa-tactcaagcacacaagcaagagatttcatatgct 33052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 10649985 - 10649927
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||||||||| || ||||||||||||||| ||| || | || |||||||||||||||||    
T  10649985 tacaattgcttaaacacaaaagcaagagatttccaaatgcttaagcacaaaagcaagag 10649927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 19506130 - 19506012
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| ||| |||| |||||| |||| ||  | ||| || |||||||||  |||||||||||| ||| ||||  |||| | ||||| |||||||     
T  19506130 caattatacaggttacttcgacaatccggaagtagtcatgttccacttgcacttccaaggagagttcattaagatcagaatctgattacaaatgctcaaa 19506031  T
Q  251 cacaaaagcaagagacttc 269  Q
    |||| ||| ||||||||||    
T  19506030 cacacaagtaagagacttc 19506012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 20383134 - 20383060
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttca 218  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||| ||||    
T  20383134 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagacttca 20383060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 17879149 - 17879205
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaaga 294  Q
    |||||||||||||||||| |||||||||||||  || | |||||||||| ||||||||    
T  17879149 tacaattgctcaagcacacaagcaagagactttcaa-tgctcaagcacataagcaaga 17879205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 18557554 - 18557602
Alignment:
Q  246 tcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||||||||    
T  18557554 tcaagcacaaacgcaagagacttcata-tgctcaagcacaaaagcaagag 18557602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 29692667 - 29692748
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||| |||||||| | ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||    
T  29692667 acaaagcaattatataggttccttccacaaaccggaagtcagtcatgtcccccttgcacttccaaggagagttcactaaaat 29692748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 40002584 - 40002653
Alignment:
Q  148 aaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttc 217  Q
    ||||||||||||  ||||||||||||| | |||| ||  |  ||||||||||||||| ||||||||||||    
T  40002584 aaacaattatactggttccttccacaaaccggaagtagtccagtcccccttgcacttctaaggagagttc 40002653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 17526487 - 17526451
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||||  |||||||||||||||||||    
T  17526487 tgtcccccttgcacttccaaggagagttcactaaaat 17526451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 18679168 - 18679248
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| |||||||||| || | |||| ||  | |||||||||||||| |  ||||| ||||||||||||    
T  18679168 cacaaagcaattatacaggttccttccataaaccggaagtagtcatgtcccccttgcacatccaaggacagttcactaaaa 18679248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 18718357 - 18718437
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| |||||||||| || | |||| ||  | |||||||||||||| |  ||||| ||||||||||||    
T  18718357 cacaaagcaattatacaggttccttccataaaccggaagtagtcatgtcccccttgcacatccaaggacagttcactaaaa 18718437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 21932283 - 21932315
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||||||||||||| |||||||||||||||    
T  21932283 tgtcccccttgcactttcaaggagagttcacta 21932315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 24498773 - 24498726
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcaca 285  Q
    |||||||||||||||||| |||||||| |||||||| | ||||||||||    
T  24498773 tacaattgctcaagcacacaagcaagatacttcaaa-tgctcaagcaca 24498726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 5e-53; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 16325247 - 16325087
Alignment:
Q  146 caaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgc 245  Q
    |||| |||||||||| || ||||||| |||| |||| ||  ||||||||||||||||||  ||||||||||||||||||||||||| | | |||||||||    
T  16325247 caaagcaattatacaggt-ccttccataatccggaagtagtcttgtcccccttgcacttccaaggagagttcactaaaatcaatatttgattacaattgc 16325149  T
Q  246 tcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16325148 tcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 16325087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 152 - 307
Target Start/End: Complemental strand, 19889726 - 19889571
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    ||||||| | ||||||||||||||| |||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||| | |||||||| ||||||    
T  19889726 aattatataggttccttccacaatccggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaattgatcaagc 19889627  T
Q  252 acaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19889626 acaaaagcaagagacttcaaactactcaagcacaaaatcaagaggtttcctatgct 19889571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 13890191 - 13890354
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||  | || ||   |||||||||||| ||||  ||||||||||||||||||||||||||| | ||| |||    
T  13890191 cacaaagcaattatacatgttccttccacaattcgaaagtagttttgtcccccttgtacttccaaggagagttcactaaaatcaatatctgattaccatt 13890290  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13890291 gctcaaacacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 13890354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 20571749 - 20571586
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||| |||| ||  | |||||| |||||||||  ||||| ||||||||||||||||||| | | ||||| |    
T  20571749 cacaaagcaattatacaggttccttccacaatccggaagtagtcctgtccctcttgcacttccaaggatagttcactaaaatcaatatatgattacaaat 20571650  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20571649 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcatatgct 20571586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 17057816 - 17057700
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    |||||||| |||||| ||| ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17057816 tccccctttcactttcaagcagagttcgctaaaatcaatatctgattacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 17057717  T
Q  291 aagaggtttcctatgct 307  Q
    |||||||||||||||||    
T  17057716 aagaggtttcctatgct 17057700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 152 - 307
Target Start/End: Original strand, 13027150 - 13027305
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    |||||| || |||||||||||||||| ||| ||  ||||||||| ||| ||||  ||||||||||||||||||||||||||| | ||||||||||||| |    
T  13027150 aattatgcaggttccttccacaatctagaagtagtcttgtcccctttgtacttccaaggagagttcactaaaatcaatatctgattacaattgctcaaac 13027249  T
Q  252 acaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  13027250 acaaaagcaagagacttcaaactactcaagtacaaaaataagaggtttcctatgct 13027305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 18473430 - 18473585
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| ||||||||||||||| |||| ||  | ||||||||||||||||  || |||||||||||||||||||||||| | ||||| ||||||||    
T  18473430 caattatacaggttccttccacaatccggaagtagtcatgtcccccttgcacttccaatgagagttcactaaaatcaatatctgattacaaatgctcaag 18473529  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    || | ||||||||||||||||| ||||||| |||| ||||||||| |||||||||||    
T  18473530 catacaagcaagagacttcaaa-tactcaaccacacaagcaagagatttcctatgct 18473585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 14903167 - 14903004
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||| | || ||  | |||| |||||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  14903167 cacaaagcaattatacaggttccttccacaatccgaaagtagtcctgtctcccttgcacttccaaggagagttcactaaaatcaatatctaattacaaat 14903068  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||| || | | |||||||||||| || |||| ||||||||||||||||| |||| ||||||    
T  14903067 gctcaatcatacatgcaagagacttccaaatactgaagcacaaaagcaagagatttcttatgct 14903004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 2651205 - 2651368
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||| |||||| |||| |||| ||  | ||||||||||||||||| | | ||||||||||||||||||||| | | ||||| |    
T  2651205 cacaaatcaattatacaggtttcttccataatccggaagtagtcctgtcccccttgcactttcaggtagagttcactaaaatcaatatttgattacaaat 2651304  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||| |||||||||||||| || || ||||||||| ||||||||| ||| |||||||    
T  2651305 gctcaagcacacaagcaagagacttctaaataatcaagcacacaagcaagagattttctatgct 2651368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 18773453 - 18773569
Alignment:
Q  146 caaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgc 245  Q
    |||| |||||||||| ||||||||||||||| |||| ||  | |||||||||||| |||| ||||||||||||||  ||||||||||| | |||||||||    
T  18773453 caaagcaattatacaggttccttccacaatccggaagtagtcatgtcccccttgccctttcaaggagagttcact--aatcaatatctgattacaattgc 18773550  T
Q  246 tcaagcacaaaagcaagag 264  Q
    |||||||||||||||||||    
T  18773551 tcaagcacaaaagcaagag 18773569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 307
Target Start/End: Original strand, 11900555 - 11900714
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattgctca-a 249  Q
    ||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||| ||||      
T  11900555 aattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctaattacaattactcact 11900654  T
Q  250 gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  11900655 gctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 11900714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 307
Target Start/End: Original strand, 7221924 - 7222064
Alignment:
Q  166 cttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagaga 265  Q
    |||||||||||||||| ||  |  |||| ||||||||||| || |||| ||||||| |||| | || | | ||||| |||||||||||| ||||||||||    
T  7221924 cttccacaatctggaagtagtccagtccgccttgcactttcaatgagatttcactataatccaaatttgattacaaatgctcaagcacataagcaagaga 7222023  T
Q  266 cttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||| ||||||||||| ||||||||| |||||||||||    
T  7222024 cttcaaac-actcaagcacacaagcaagagatttcctatgct 7222064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13890064 - 13890163
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||  || || |||||||||||||||| || ||||||    
T  13890064 ttgtgttagatttttcttctttttaaaactaagtccagtgttcagagtctgatagagttcagagtcatgaacaaagttcagagtcttatgtagtggataa 13890163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 8686198 - 8686029
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa---tcaatatctaactaca 240  Q
    ||||||||||||||||||||||||||||||| | |||| ||  | || |||||||||||||| ||||||||||||||||||     ||||||| | ||||    
T  8686198 cacaaaacaattatacaagttccttccacaaaccggaagtagtcctgccccccttgcactttcaaggagagttcactaaaaaatgtaatatctgattaca 8686099  T
Q  241 attgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||  ||  |||  |||||||||||| |||||||||||||||||   |||||| ||||| |||||    
T  8686098 attgctcactgctaaaactagcaagagacttaaaactactcaagcacaactacaagagatttcccatgct 8686029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 13693210 - 13693352
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| |||||||||| |||| |||| ||  | ||||||||||||||||  ||||||||||||||||||| |  |||| | | ||| |||||||     
T  13693210 caattatacaggttccttccataatccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaataagaatctgattgcaaatgctcaaa 13693309  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||| ||||||||||||||||| ||||||| |||| |||||||||    
T  13693310 cacacaagcaagagacttcaaa-tactcaa-cacataagcaagag 13693352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16325376 - 16325277
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||| |||||||||||||||||| |||||||| |||| || |||||||| | || ||||||| || || ||||||||||| ||||||||||||||    
T  16325376 ttgtgttagttttttcttctttttaaaactaagtccagtgttgagagtctgatagaatttagagtctagaacaaagttcagagtcatatgcagcggataa 16325277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19889861 - 19889770
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgca 92  Q
    |||||||||  ||||||||||||||||| |||||||| |||| || |||||||| |||||||||||| || || ||||||||||||||||||    
T  19889861 ttgtgttagtcttttcttctttttaaaactaagtccagtgtttagagtctgatagagttcagagtctagaacaaagttcagagtcttatgca 19889770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 10249290 - 10249456
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| ||| ||||||  |||||||||||| | |||| ||  | |||||||||||||| |  ||| |||||||||||||||||||||   | |||||||    
T  10249290 cacaaagcaactatacagattccttccacaaaccggaactagtcatgtcccccttgcacctccaagaagagttcactaaaatcaatattcgattacaatt 10249389  T
Q  244 gctcaag---cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| |   || || ||||||||||||||||||||||||| ||||   |||||| |||||||||||    
T  10249390 gctcagggctcaaaatagcaagagacttcaaactactcaagaacaactacaagagatttcctatgct 10249456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 11915064 - 11915225
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc--aatatctaactacaattgctca 248  Q
    |||||||||| ||||||||||||| |  ||| ||  ||||||||||||||||||  ||||| ||||||||||||    ||||||| | ||||||||||||    
T  11915064 caattatacaggttccttccacaaaccagaagtagtcttgtcccccttgcacttccaaggatagttcactaaaaatgtaatatcttattacaattgctca 11915163  T
Q  249 a-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
      ||  |||  |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  11915164 ttgctaaaactagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 11915225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 55379666 - 55379834
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    ||||||||||||||||| |||||||||||||   |||| ||  | ||||||||||||||||  ||||||||||||||||||    ||||||| | |||||    
T  55379666 cacaaaacaattatacaggttccttccacaaaacggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaaatgtaatatctgattacaa 55379765  T
Q  242 ttgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  55379766 ctgctcactgctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 55379834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 37986367 - 37986285
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttt-taaggagagttcactaaaat 225  Q
    ||||||||||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||| ||||||||||||||||||||    
T  37986367 cacaaaacaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgcactttataaggagagttcactaaaat 37986285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 12600116 - 12600197
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||||||||||||||||||| | |||| ||  | ||||||||||| ||||  |||||||||||||||||||    
T  12600116 cacaaaacaattatacaagttccttccacaaaccggaagtagtcctgtcccccttgaacttccaaggagagttcactaaaat 12600197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 23749880 - 23750047
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| ||||||||||  |||||||||||| | |||| ||  ||||||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  23749880 cacaaagcaattatacagattccttccacaaaccggaagtagtcttgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 23749979  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    || |||     |||   ||||||||||||||||||||||||||||||  ||| ||  |||||||||||    
T  23749980 tgttcactgttaaaactagcaagagacttcaaactactcaagcacaactgcaggatatttcctatgct 23750047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 41115512 - 41115344
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcact-aaaat-caatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||| ||| | |||| || || ||||||||||||||||  |||||||||||||| |||||  ||||| | | |||||    
T  41115512 cacaaagcaattatacaggttccttcctcaaaccggaagtagccctgtcccccttgcacttccaaggagagttcactgaaaatgtaatatttgattacaa 41115413  T
Q  242 ttgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||  ||  |||  |||||||||||| |||||||||||||||||  ||||||| |||||||||||    
T  41115412 ctgctcactgctaaaactagcaagagactttaaactactcaagcacaactgcaagagatttcctatgct 41115344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 6641041 - 6641206
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    ||||||||||||||||||||||||||||||| |  ||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  6641041 cacaaaacaattatacaagttccttccacaaac-cgaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 6641139  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  |||||||||||||||| | |||||||||||  |||||||  ||||||||||    
T  6641140 tgctcactgctaaaactagcaagagacttcaaa-tgctcaagcacaactgcaagagacttcctatgct 6641206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 300
Target Start/End: Complemental strand, 10661914 - 10661760
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaattgctca- 248  Q
    |||||||||| ||||||||||||| | |||| ||  |||||||| ||||||| |   ||||||||||||||||||| ||||||| | ||||||||||||     
T  10661914 caattatacaggttccttccacaaaccggaagtagtcttgtcccacttgcacctcccaggagagttcactaaaatcaaatatctgattacaattgctcac 10661815  T
Q  249 agcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttc 300  Q
     || ||||   ||||||||||||||| |||||||| |||||  ||||||| ||||    
T  10661814 tgctcaaaactagcaagagacttcaagctactcaaccacaagtgcaagagatttc 10661760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 300
Target Start/End: Complemental strand, 10876059 - 10875905
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaattgctca- 248  Q
    |||||||||| ||||||||||||| | |||| ||  |||||||| ||||||| |   ||||||||||||||||||| ||||||| | ||||||||||||     
T  10876059 caattatacaggttccttccacaaaccggaagtagtcttgtcccacttgcacctcccaggagagttcactaaaatcaaatatctgattacaattgctcac 10875960  T
Q  249 agcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttc 300  Q
     || ||||   ||||||||||||||| |||||||| |||||  ||||||| ||||    
T  10875959 tgctcaaaactagcaagagacttcaagctactcaaccacaagtgcaagagatttc 10875905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 15015134 - 15014973
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc--aatatctaactacaattgctca 248  Q
    ||||| |||| |||||||||||||   |||| ||  | ||||||| ||||||||  ||||||||||||||||||    ||||||||| ||||| ||||||    
T  15015134 caattttacaggttccttccacaaatcggaagtagtcctgtcccctttgcacttccaaggagagttcactaaaaatgtaatatctaattacaactgctca 15015035  T
Q  249 a-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
      ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  15015034 ctgctaaaactagcaagagacttcaaactactcaagcacaattgcaagagatttcctatgct 15014973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 14605660 - 14605578
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaat-aaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||||||||||||||||| | |||| | || | ||||||||||||||||  |||||||||||||||||||    
T  14605660 cacaaagcaattatacaagttccttccacaaaccggaagtcaatcctgtcccccttgcacttccaaggagagttcactaaaat 14605578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 32491450 - 32491381
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||| || ||||||||| |||||||||||    
T  32491450 tacaaatgctcaagcacacaagcaagagacttcaaa-tactcaagctcataagcaagagatttcctatgct 32491381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 29681271 - 29681190
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||||| ||||||||||||| |  ||| ||  | ||||||||||||||||  |||||||||||||||||||    
T  29681271 cacaaaacaattatacaggttccttccacaaaccagaagtagtcatgtcccccttgcacttccaaggagagttcactaaaat 29681190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 18773318 - 18773382
Alignment:
Q  3 gtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtct 67  Q
    ||||||| |||||||||||||||||| |||||  ||||||||| |||||||| ||||||||||||    
T  18773318 gtgttagttttttcttctttttaaaactaagtataatgttcagagtctgatagagttcagagtct 18773382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 13027039 - 13027114
Alignment:
Q  25 aaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||| |||||||||||||| | |||||||| ||||| |||||| || || |||||||||||| |||||||||||||    
T  13027039 aaaactaagtccaatgttctgagtctgatagagttcggagtcttgaacaaagttcagagtctgatgcagcggataa 13027114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 301
Target Start/End: Complemental strand, 17788794 - 17788633
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaat 242  Q
    ||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||| ||  ||||||||||||||||||    ||||| | | |||||     
T  17788794 acaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcatttccaaggagagttcactaaaaatgtaatatttgattacaac 17788695  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcc 301  Q
    ||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||    
T  17788694 tgctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcc 17788633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 21350853 - 21350790
Alignment:
Q  242 ttgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatg 305  Q
    |||||||||||||||| ||||||| |||||  |||||||||||||||||||||| |||| ||||    
T  21350853 ttgctcaagcacaaaaacaagagatttcaatatactcaagcacaaaagcaagagatttcttatg 21350790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 24619169 - 24619226
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||    
T  24619169 tacaattgctcaagcacacaagcaagagactttaaa-tgctcaagcacaaaagcaagag 24619226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 36470325 - 36470407
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| | |  ||||||||||||||||||  |||||||||||||||||||    
T  36470325 cacaaagcaattatacaggttccttccacaaaccggaagtcagtcttgtcccccttgcacttccaaggagagttcactaaaat 36470407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 3395006 - 3395111
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    ||||||||||||||||| ||||||||||||| | | || ||  | |||||| |||||||||  |||||||||| ||||||||  ||||||| | ||||||    
T  3395006 cacaaaacaattatacaggttccttccacaaaccgaaagtagtcatgtccctcttgcacttccaaggagagtttactaaaatgtaatatctgattacaat 3395105  T
Q  243 tgctca 248  Q
    ||||||    
T  3395106 tgctca 3395111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 19912634 - 19912529
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| |||||||| |||| | |||| ||  | ||||||||||||| ||| |||||||||||| ||||||  ||||||||| |||||     
T  19912634 cacaaagcaattatacaggttccttctacaaaccggaagtagtcatgtcccccttgcattttcaaggagagttcagtaaaatgtaatatctaattacaac 19912535  T
Q  243 tgctca 248  Q
    ||||||    
T  19912534 tgctca 19912529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 22089642 - 22089723
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||| |||||    
T  22089642 cacaaagcaattatacaggttccttccacaaaccggaattagtcatgtcccccttgcacttccaaggagagttcaccaaaat 22089723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 307
Target Start/End: Original strand, 18393983 - 18394097
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    ||||||||||||||  || || | || |||||||||||  ||| | |||||| ||||||| ||| ||||||||||||||||| |||||||||||| ||||    
T  18393983 tcccccttgcacttccaaagaaattttactaaaatcaagttctgattacaat-gctcaagaacacaagcaagagacttcaaa-tactcaagcacacaagc 18394080  T
Q  291 aagaggtttcctatgct 307  Q
    || || |||| ||||||    
T  18394081 aacagatttcttatgct 18394097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 16847950 - 16848009
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca 248  Q
    ||||||||||||||||  ||||||||||||||||||  ||||||| | ||||||||||||    
T  16847950 tgtcccccttgcacttccaaggagagttcactaaaagtaatatctgattacaattgctca 16848009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 16852906 - 16852965
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca 248  Q
    ||||||||||||||||  ||||||||||||||||||  ||||||| | ||||||||||||    
T  16852906 tgtcccccttgcacttccaaggagagttcactaaaagtaatatctgattacaattgctca 16852965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 15135203 - 15135253
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||| |||||||||||| | |||||| |||||||||||    
T  15135203 agcaagagacttcaaacaactcaagcacaacaacaagagatttcctatgct 15135253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 16476015 - 16475966
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||||||    
T  16476015 agcaagagacttcaaactactcaagcacacaa-caagagatttcctatgct 16475966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 22676277 - 22676199
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaat-aaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||| |||||||||| ||||||||||||| | |||| | || | ||||||||||||||||  |||||||||||||||    
T  22676277 cacaaagcaattatacaggttccttccacaaaccggaagtcaatcctgtcccccttgcacttccaaggagagttcacta 22676199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 16476133 - 16476053
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| || ||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  || |||||||||||||||    
T  16476133 cacaaagcagttatacatgttccttccacaaaccggaagtagtcatgtcccccttgcacttccaatgagagttcactaaaa 16476053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 16631803 - 16631878
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||| ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||    
T  16631803 caattatacaggttccttccacaaaccggaagtcagtcatgtcccccttgcacttccaaggagagttcactaaaat 16631878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 20571860 - 20571817
Alignment:
Q  57 gttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||| || ||||||||||||||||||| ||||||    
T  20571860 gttcagagtctggaacaaagttcagagtcttatgcagtggataa 20571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 9266801 - 9266850
Alignment:
Q  245 ctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||||||||| ||||||||||||||| | | ||||||||||||||||||||    
T  9266801 ctcaagcacacaagcaagagacttcata-tgctcaagcacaaaagcaagag 9266850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 17527051 - 17526959
Alignment:
Q  192 cccccttgcacttttaaggagagtt-cactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcaca 285  Q
    |||||||||||||  ||||||| || ||||| |||| || ||| | ||||| |||||||||| | ||||||||||||||||| ||||||||||||    
T  17527051 cccccttgcacttccaaggagattttcactataatccat-tctgattacaaatgctcaagcatacaagcaagagacttcaaa-tactcaagcaca 17526959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 17539873 - 17539923
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||||||||||| |||   |||||| |||||||||||    
T  17539873 agcaagagacttcaaactactcaagcgcaactacaagagatttcctatgct 17539923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 23087197 - 23087242
Alignment:
Q  240 aattgctcaagcacaaaagcaagagacttcaaactactcaagcacaa 286  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||    
T  23087197 aattgctcaagcacacaaacaagagacttcaaa-tactcaagcacaa 23087242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Original strand, 12606137 - 12606170
Alignment:
Q  235 actacaattgctcaagcacaaaagcaagagactt 268  Q
    |||||||||||||||||||| |||||||||||||    
T  12606137 actacaattgctcaagcacataagcaagagactt 12606170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 24628654 - 24628573
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||||||||||  || ||||||||| |  ||| ||  | |||||||||| |||||| || ||||||||||||||||    
T  24628654 cacaaaacaattatacagatttcttccacaaaccagaagtagtcctgtcccccttacactttcaaagagagttcactaaaat 24628573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 6516854 - 6516922
Alignment:
Q  154 ttatacaagttccttccacaatctggaaat-aaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| | |||| | || | ||||||||||||||||  |||||||||||||||    
T  6516854 ttatacaggttccttccacaaaccggaagtcaatcctgtcccccttgcacttccaaggagagttcacta 6516922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 55731214 - 55731282
Alignment:
Q  154 ttatacaagttccttccacaatctggaaat-aaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| | |||| | || | ||||||||||||||||  |||||||||||||||    
T  55731214 ttatacaggttccttccacaaaccggaagtcaatcctgtcccccttgcacttccaaggagagttcacta 55731282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 5e-53; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 18130696 - 18130533
Alignment:
Q  147 aaaacaattatacaagttccttccacaatctggaaataac---cttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||  ||||||||||||||||||  ||     ||||||||||||||||||  ||||||||||||||||||||||||||| | |||||||    
T  18130696 aaaacaattatacagattccttccacaatctggatgtacatgtcttgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaatt 18130597  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18130596 gctcaagcacaaaagcaagaaacttcaaactactcaagcacaaaagcaagaggtttcctatgct 18130533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 16233842 - 16233680
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||| ||||||||||| ||||||||||||||| |||| ||  |||||||||||||| |||  ||||||||||||||||||||||||||| | |||| ||    
T  16233842 cacaagacaattatacatgttccttccacaatccggaagtagtcttgtcccccttgcgcttccaaggagagttcactaaaatcaatatctgattacagtt 16233743  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||    
T  16233742 gctcaaccacaaaa-caagagacttcaaactactaaatcacaaaagcaagaggtttcctatgct 16233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 9346139 - 9346302
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||| | || ||  | ||||||| ||||||||  |||||||||||||| |||||||||| | | |||||||    
T  9346139 cacaaagcaattatacatgttccttccacaatccgtaagtagtcatgtcccctttgcacttccaaggagagttcactgaaatcaatatatgattacaatt 9346238  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||| | ||| ||||||    
T  9346239 gctcaagcacaaaagaaagagactttaaactactcaagcacaaaagcaagaagcttcatatgct 9346302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 23053783 - 23053896
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||||| |||||||    
T  23053783 tcccccttgcattttcaaggagagttcactaaaatcaatatctgattacaattgttcaagcacaaaaacaagagacttcaaactactcaagcgcaaaagc 23053882  T
Q  291 aagaggtttcctat 304  Q
    ||||||||| ||||    
T  23053883 aagaggttttctat 23053896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16233969 - 16233867
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  16233969 ttgtgttagctttttcttctttttaaaactaagtccagtgttcagagtctgatagagttcagagtcttgaacagagttcagagtcttatgcagcggataa 16233870  T
Q  101 tgt 103  Q
    |||    
T  16233869 tgt 16233867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 20110611 - 20110499
Alignment:
Q  195 ccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaaga 294  Q
    ||||||||||| ||||||||||||||||||| ||||||| | |||||||| |||||||||| |||||||||||||||||||||||||||| |  ||||||    
T  20110611 ccttgcactttcaaggagagttcactaaaattaatatctgattacaattgatcaagcacaatagcaagagacttcaaactactcaagcactactgcaaga 20110512  T
Q  295 ggtttcctatgct 307  Q
    |||||||||||||    
T  20110511 ggtttcctatgct 20110499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 26280763 - 26280602
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||| ||||||| ||||||||||||||| |||| ||  | |  |||||||||||||  ||||||||||||||||| ||||||||| | ||||| |    
T  26280763 cacaaaacacttatacaggttccttccacaatcaggaagtagtccta-cccccttgcacttccaaggagagttcactaaa-tcaatatctgattacaaat 26280666  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | |||||||||||||||||||||||| || |||||||||||||||||||||| |||| ||||||    
T  26280665 gttcaagcacaaaagcaagagacttccaaatactcaagcacaaaagcaagagatttcttatgct 26280602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9346008 - 9346110
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||| || ||||||||||||||||||| |||||||||    
T  9346008 ttgtgttagttttttcttctttttaaaagtaagtccaatgttcagagtttgatagagttcggagtctagaacagagttcagagtcttatgaagcggataa 9346107  T
Q  101 tgt 103  Q
    |||    
T  9346108 tgt 9346110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27858015 - 27858114
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||   |||| ||||||||||||||||| |||||||||||    
T  27858015 ttgtgttagctttttcttctttttaaaactaagtccaatgttcagagtctgatagagttcagaaattggatcagagttcagagtcttaagcagcggataa 27858114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 26702981 - 26703136
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    ||||||||||||||||||||||||||||||| ||    |||||| |||||||||  || |||||||||| ||||||||||| | | ||||| |||||||     
T  26702981 caattatacaagttccttccacaatctggaagtagttctgtccctcttgcacttccaaagagagttcacgaaaatcaatatttgattacaaatgctcaaa 26703080  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| ||||||||||||||||| ||||||||| || | ||||||| ||| |||||||    
T  26703081 cacacaagcaagagacttcaaa-tactcaagcgcacatgcaagagattttctatgct 26703136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 187 - 307
Target Start/End: Original strand, 17017995 - 17018118
Alignment:
Q  187 cttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaa-gcacaaa--agcaagagacttcaaactactcaagca 283  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||| | | ||||||||||||| || ||||  ||||||||| ||||||| |||||||||    
T  17017995 cttgtcccccttgcacttccaaggagagttcgctaaaatcaatatttgattacaattgctcaacgctcaaaatagcaagagatttcaaacaactcaagca 17018094  T
Q  284 caaaagcaagaggtttcctatgct 307  Q
    |||  ||||||| |||||||||||    
T  17018095 caactgcaagagatttcctatgct 17018118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 27858144 - 27858299
Alignment:
Q  150 acaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaa 249  Q
    ||||||||||| ||||||||||||||  |||| ||  ||||  |||||| |||||  |||||||||||||||||||||| || | | ||||| |||||||    
T  27858144 acaattatacaggttccttccacaattcggaagtagtcttg--ccccttacacttccaaggagagttcactaaaatcaaaatttgattacaaatgctcaa 27858241  T
Q  250 gcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||| | |||||||||||||  || |||||||||||| || |||||| ||| |||||||    
T  27858242 gcatacaagcaagagactttcaaatactcaagcacacaaacaagagattttctatgct 27858299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 21684675 - 21684555
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattg 244  Q
    ||||| |||||||| | ||||||||||||||  |||| || || ||||||||||||| ||  ||| ||| ||||||||||||||||||| | ||||| ||    
T  21684675 acaaagcaattatataggttccttccacaattcggaagtagccatgtcccccttgcaattccaagtagaattcactaaaatcaatatctgattacaaatg 21684576  T
Q  245 ctcaagcacaaaagcaagaga 265  Q
    |||||||||||||| ||||||    
T  21684575 ctcaagcacaaaagaaagaga 21684555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 10756785 - 10756953
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||| ||||||||||||||||||    ||||||| | |||||    
T  10756785 cacaaatcaattatacatgttccttccacaaaccggaagtagtcatgtcccccttgcactttcaaggagagttcactaaaaatgtaatatctgattacaa 10756884  T
Q  242 ttgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  10756885 ctgctcactgctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 10756953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22601427 - 22601326
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||| |||||||| ||||||||  || || || |||||||| |||||| ||||||||||    
T  22601427 ttgtgttagctttttcttctttt-aaaattaagtccagtgttcagagtctgatagagttcagacccttgaacaaagttcagaatcttattcagcggataa 22601329  T
Q  101 tgt 103  Q
    |||    
T  22601328 tgt 22601326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 303
Target Start/End: Complemental strand, 12625265 - 12625109
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattgctca- 248  Q
    |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||| ||||||     
T  12625265 caattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaactgctcac 12625166  T
Q  249 agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttccta 303  Q
     ||  |||  ||||||||||||||||||||||||||| ||  ||||||| |||||||    
T  12625165 tgctaaaactagcaagagacttcaaactactcaagcataactgcaagagatttccta 12625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 22601301 - 22601215
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatat 231  Q
    |||||| |||||||||| ||||||||||||||| |||| ||  | ||||||||||||||||  |||||||||||||||||||||||||    
T  22601301 cacaaagcaattatacaggttccttccacaatc-ggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatcaatat 22601215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31358567 - 31358664
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggata 99  Q
    |||||||| ||||||||||||||||||  ||||| ||  || ||| |||||||| ||||||||||||||||||  ||||||||||| ||||||||||||    
T  31358567 ttgtgttaactttttcttctttttaaac-taagttcagagtccagagtctgatagagttcagagtctggagcaatgttcagagtctaatgcagcggata 31358664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 269
Target Start/End: Complemental strand, 18517781 - 18517658
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| |||||| || ||||| |||| ||  | || ||||| |||||||  ||||||||||||||||| ||||||||| | ||||| |    
T  18517781 cacaaatcaattatacaggttcct-cctcaatccggaagtattcatgccccccatgcacttccaaggagagttcactaaa-tcaatatctgattacaaat 18517684  T
Q  244 gctcaagcacaaaagcaagagacttc 269  Q
     |||||||||||||||||||||||||    
T  18517683 tctcaagcacaaaagcaagagacttc 18517658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 12283783 - 12283863
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    ||||||||||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||    
T  12283783 cacaaaacaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaa 12283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 20908779 - 20908939
Alignment:
Q  151 caattatacaagttccttccacaa-tctggaaataaccttgtccccctt-gcacttttaaggagagttcactaaaatcaatatctaactacaattgctca 248  Q
    |||||||||| ||||||||||||| |||| || ||  |||||||||||| ||||||  ||||||||||| ||||||||||||||| | ||||| ||||||    
T  20908779 caattatacaggttccttccacaaatctg-aagtagtcttgtccccctttgcacttccaaggagagttccctaaaatcaatatctgattacaaatgctca 20908877  T
Q  249 ---agcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
         || || |||| ||||||| ||||||||||| |||||  ||||||| |||||||||||    
T  20908878 cttctcaaaatagcacgagacttgaaactactcaaacacaaccgcaagagatttcctatgct 20908939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 8698341 - 8698417
Alignment:
Q  230 atctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| ||||||| || ||||||||| ||| || |||||||||| |||||||||||||||||||||| |||||||||||    
T  8698341 atctgactacaaatgttcaagcacacaagaaaaagacttcaaa-tactcaagcacaaaagcaagagatttcctatgct 8698417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 307
Target Start/End: Complemental strand, 21192540 - 21192416
Alignment:
Q  187 cttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaattgctcaa-gcacaaa--agcaagagacttcaaactactcaagc 282  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||| | | ||| ||||||  ||  |||  |||||||||| |||||||||||||||    
T  21192540 cttgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattgcaactgctcactgctaaaactagcaagagacatcaaactactcaagc 21192441  T
Q  283 acaaaagcaagaggtttcctatgct 307  Q
    ||||  ||||||| |||||||||||    
T  21192440 acaactgcaagagatttcctatgct 21192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 22428057 - 22427977
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||    
T  22428057 cacaaatcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaa 22427977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 17025564 - 17025514
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  17025564 agcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 17025514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 22202453 - 22202348
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| ||||||||||  |||||||||||| | |||| ||  | ||||||||||||||||  ||||||| |||||||||||  ||||||| | ||||||    
T  22202453 cacaaagcaattatacagcttccttccacaaaccggaagtagtcctgtcccccttgcacttccaaggagatttcactaaaatgtaatatctgattacaat 22202354  T
Q  243 tgctca 248  Q
    ||||||    
T  22202353 tgctca 22202348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 22465522 - 22465449
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||||||| ||| ||||||||| | |||| ||  ||||||||||||||||||  ||||||||||||||||||    
T  22465522 caattatacatgtttcttccacaaaccggaagtagtcttgtcccccttgcacttccaaggagagttcactaaaa 22465449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 14293325 - 14293261
Alignment:
Q  162 gttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||| | ||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  14293325 gttccttccacaaaccggaaataagtcttgtcccccttgcacttccaaggagagttcactaaaat 14293261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 249
Target Start/End: Original strand, 19214983 - 19215079
Alignment:
Q  154 ttatacaagttccttccacaatctggaaat-aaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaa 249  Q
    ||||||| ||||||||||||| | |||||| || | ||||||| ||| ||||  ||||||||||||||||||  ||||||| | |||||||||||||    
T  19214983 ttatacaggttccttccacaaaccggaaatcaatcctgtcccctttgtacttccaaggagagttcactaaaagtaatatctgattacaattgctcaa 19215079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 46088360 - 46088428
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||||||||||||||||| | |||| | |  ||||||||||||||||||| |||||||||||||||    
T  46088360 ttatacaagttccttccacaaaccggaagtcagtcttgtcccccttgcactttcaaggagagttcacta 46088428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 307
Target Start/End: Original strand, 18614325 - 18614446
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatat--ctaactacaattgctcaa-gcacaaaa--gcaagagacttcaaactactcaagcaca 285  Q
    ||||||||| ||||  ||||||| |||||||||||||||||  || | ||||| ||||||  || |||||  |||||||||||||||||||||||| | |    
T  18614325 tcccccttgaacttccaaggagaattcactaaaatcaatatatctgattacaactgctcactgctcaaaatagcaagagacttcaaactactcaagtata 18614424  T
Q  286 aaagcaagaggtttcctatgct 307  Q
    |  ||||||| |||||||||||    
T  18614425 actgcaagagatttcctatgct 18614446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 22639774 - 22639828
Alignment:
Q  240 aattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||| |||||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  22639774 aattactcaagcacacaagcaagagacttcaaa-tgctcaagcacaaaagcaagag 22639828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 286
Target Start/End: Complemental strand, 26702848 - 26702702
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    ||||| |||||||||| ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||  ||||||| |  ||||     
T  26702848 acaaagcaattatacaggttccttccacaaaccggaagtcagtcctgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgatcacaac 26702749  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaa 286  Q
    ||||||  ||  |||  ||||||||||||||||||||| ||||||||    
T  26702748 tgctcactgctaaaactagcaagagacttcaaactacttaagcacaa 26702702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 31358819 - 31358888
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| |||||||||||| |||||| | |||||||| | |||||||||| ||||||||| |||||||||||    
T  31358819 tacaaatgctcaagcacacaagcaaaaaacttcaaatt-ctcaagcacacaagcaagagatttcctatgct 31358888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 32786657 - 32786579
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaat-aaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||| |||||||||| ||||||||||||| |||||| | || | |||| |||||||||||  |||||||||||||||    
T  32786657 cacaaagcaattatacaggttccttccacaaactggaagtcaatcctgtctcccttgcacttccaaggagagttcacta 32786579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 48703624 - 48703705
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||| ||||||||||||||| | |||| ||  | || |||| ||||||||  |||||||||||||||||||    
T  48703624 cacaaagcaattatataagttccttccacaaaccggaagtagtcatgcccccattgcacttccaaggagagttcactaaaat 48703705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 7309224 - 7309260
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||||||||| ||||||||||||||||||||    
T  7309224 tgtcccccttgcacttctaaggagagttcactaaaat 7309260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23549557 - 23549638
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagt 84  Q
    ||||||||| ||||||||||||||  || ||||||||| ||||||  ||||||| ||||||||  ||||||||  |||||||||    
T  23549557 ttgtgttagttttttcttcttttt--aactaagtccaaagttcagcttctgatagagttcagaacctggagcaatgttcagagt 23549638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 26280605 - 26280554
Alignment:
Q  243 tgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||||||||||||| ||||||||||||| | | ||||||||||||||||||||    
T  26280605 tgctcaagcacaaacgcaagagacttcata-tgctcaagcacaaaagcaagag 26280554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2820119 - 2820021
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||| |||||||||||||| ||| ||||| ||  |||||  |||||||| ||| |||||| |||| ||   |||||||||| |||||||||||||    
T  2820119 ttgtgttagttttttcttcttttt-aaactaagttcagagttcaaagtctgatagagtgcagagtatggatcaatattcagagtctaatgcagcggataa 2820021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 7745759 - 7745688
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagag-ttcactaaaa 224  Q
    ||||||| ||||||||||||| | |||| || || ||||||||||||||||  |||||||| ||||||||||    
T  7745759 ttatacaggttccttccacaaaccggaagtagccatgtcccccttgcacttccaaggagagtttcactaaaa 7745688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 174
Target Start/End: Original strand, 2834018 - 2834048
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaa 174  Q
    |||||||||||||||||||||||||||||||    
T  2834018 cacaaaacaattatacaagttccttccacaa 2834048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 12283901 - 12283951
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||| ||| |||||||||  ||||||| |||||||||||    
T  12283901 agcaagagacttcaaattacacaagcacaactgcaagagatttcctatgct 12283951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18517907 - 18517850
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagtt 59  Q
    ||||||||| |||| ||||||||||||  |||||||||||||||| |||||||| ||||    
T  18517907 ttgtgttagtttttgcttctttttaaac-taagtccaatgttcagagtctgatagagtt 18517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 28493000 - 28492920
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | | | ||||||||||||  |||||||||||||||||||    
T  28493000 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctat-ccccttgcacttccaaggagagttcactaaaat 28492920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 30892455 - 30892559
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| ||||||||||  |||||||||||| |  ||| ||  | ||| ||||||||||||  |||||||||||||||||||  ||||||||| |||||     
T  30892455 cacaaagcaattatacagattccttccacaaaccagaagtagtcatgt-ccccttgcacttccaaggagagttcactaaaatgtaatatctaattacaac 30892553  T
Q  243 tgctca 248  Q
    ||||||    
T  30892554 tgctca 30892559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 36133566 - 36133643
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaa-ataaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||| |||||||||| ||||||||||||| | ||||  || || || |||||||||||||  |||||||||||||||    
T  36133566 acaaagcaattatacaggttccttccacaaaccggaagttagccctggcccccttgcacttccaaggagagttcacta 36133643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 14263959 - 14263931
Alignment:
Q  241 attgctcaagcacaaaagcaagagacttc 269  Q
    |||||||||||||||||||||||||||||    
T  14263959 attgctcaagcacaaaagcaagagacttc 14263931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 23917349 - 23917381
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttc 269  Q
    |||||||||||||||||| ||||||||||||||    
T  23917349 tacaattgctcaagcacacaagcaagagacttc 23917381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 48570937 - 48570869
Alignment:
Q  154 ttatacaagttccttccacaatctggaaat-aaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| | |||| | || | ||||||||||||||||  |||||||||||||||    
T  48570937 ttatacaggttccttccacaaaccggaagtcaatcatgtcccccttgcacttccaaggagagttcacta 48570869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 19440 - 19603
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||| ||||||||| ||||||| || |||  |||| ||  | || |||||||||||||  ||||||||||||||||||||||||||| | |||||||    
T  19440 cacaaaagaattatacaggttcctttcataattcggaagtagtcctgccccccttgcacttccaaggagagttcactaaaatcaatatctgattacaatt 19539  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19540 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 19603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 7e-52; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 16881654 - 16881817
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||| |||||||||| |||| |||| ||  ||||||||| || ||||| |||||||||||||||||||| ||||||| | |||||||    
T  16881654 cacaaaacaattatacaggttccttccataatccggaagtagtcttgtccccatttcacttctaaggagagttcactaaaataaatatctgattacaatt 16881753  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16881754 gctcaagcaccaaagcaagagacttcaaactactcaagcacaaaagcaataggtctcctatgct 16881817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 4243908 - 4243750
Alignment:
Q  149 aacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca 248  Q
    |||||||||| | ||||||||||||||| |||| |||  |||||||||||||||||  || |||| ||||||||||||||||||||| ||||||||||||    
T  4243908 aacaattatataggttccttccacaatccggaagtaatattgtcccccttgcacttccaaagagacttcactaaaatcaatatctaattacaattgctca 4243809  T
Q  249 agcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4243808 aacacaaaatcaagagacttcaaactactcaagcacaaaatcaagaggtttcctatgct 4243750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 19198624 - 19198508
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    ||||||||| ||||  ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19198624 tcccccttgaacttccaaggagagttcactaaaatcaatatctgattacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 19198525  T
Q  291 aagaggtttcctatgct 307  Q
    |||||||||||||||||    
T  19198524 aagaggtttcctatgct 19198508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 22770652 - 22770490
Alignment:
Q  146 caaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgc 245  Q
    ||||||||||||||| ||||||||||||||  |||| ||  | ||||||||||||||||  ||| ||||||||||||||||||||||| | |||||||||    
T  22770652 caaaacaattatacaggttccttccacaattcggaagtagtcatgtcccccttgcacttccaagaagagttcactaaaatcaatatctgattacaattgc 22770553  T
Q  246 tcaagcacaaaagcaagagacttcaaact-actcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  22770552 tcaaacacaaaagcaagagacttcacactaactcaagcacaaaaggaagaggtttcctatgct 22770490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 13410835 - 13410677
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||  |||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||     ||||||    
T  13410835 cacaaagcaattatacatgttccttccacaattcggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatcaatatc-----acaatt 13410741  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  13410740 ggtcaaacacaaaagcaagagacttcaaactactcaagcaaaaaagcaagatgtttcctatgct 13410677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 152 - 307
Target Start/End: Complemental strand, 15961414 - 15961260
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    |||||||||||||||||||  |||| |||| ||  | ||||||| ||||||||  ||||||||||||||||||||||||||| | |||||||| ||||||    
T  15961414 aattatacaagttccttccttaatccggaagtagtcctgtcccc-ttgcacttccaaggagagttcactaaaatcaatatctgattacaattgttcaagc 15961316  T
Q  252 acaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15961315 tcaatagcaagagacttcaaactactcaagcacaactgcaagaggtttcctatgct 15961260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 14078094 - 14077949
Alignment:
Q  162 gttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaa 261  Q
    |||||||||| ||||||||| ||  |   ||||||||||||||  ||||||||||||||||||||||||| | | ||||||||||||||| |||||||||    
T  14078094 gttccttccataatctggaagtagtccactcccccttgcacttcaaaggagagttcactaaaatcaatatttgattacaattgctcaagctcaaaagcaa 14077995  T
Q  262 gagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    || ||||||||||||||||||||||  |||||||||||||||||||    
T  14077994 gacacttcaaactactcaagcacaactgcaagaggtttcctatgct 14077949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 189 - 307
Target Start/End: Complemental strand, 8729735 - 8729617
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaa 288  Q
    |||||| |||||||||  |||||||||||  |||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  8729735 tgtccctcttgcacttcaaaggagagttctgtaaaattaatatctgattacaattgctcaagcacaaaagcaagagacttcaagctactcaaacacaaaa 8729636  T
Q  289 gcaagaggtttcctatgct 307  Q
    |||||||||||||||||||    
T  8729635 gcaagaggtttcctatgct 8729617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 189 - 307
Target Start/End: Complemental strand, 9081622 - 9081504
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaa 288  Q
    |||||| |||||||||  |||||||||||  |||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  9081622 tgtccctcttgcacttcaaaggagagttctgtaaaattaatatctgattacaattgctcaagcacaaaagcaagagacttcaagctactcaaacacaaaa 9081523  T
Q  289 gcaagaggtttcctatgct 307  Q
    |||||||||||||||||||    
T  9081522 gcaagaggtttcctatgct 9081504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 21316915 - 21317078
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||| |||| ||  |||||| |||||||||||  ||||||||||||||||||||||||||| | || || |    
T  21316915 cacaaatcaattatacaggttccttccacaatccggaagtagtcttgtctcccttgcacttccaaggagagttcactaaaatcaatatctgattaaaaat 21317014  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||| ||| |||||||| ||||| || |||| ||||||| ||||||||  |||||||||||    
T  21317015 gctcaagaacacaagcaagatacttccaaatactgaagcacacaagcaagatatttcctatgct 21317078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4244038 - 4243939
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||  |||||||| |||||||||||| |||||||||||| |||||||||||||||||||    
T  4244038 ttgtgttacctttttcttctttttaaaactaagtccagtgttcaaagtctgatagagttcagagtcttgagcagagttcaaagtcttatgcagcggataa 4243939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 13698766 - 13698928
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||| ||||| ||||||||||||||| || | ||  |||||||| |||||||||  ||||||||||||||||||||||||| | | ||||| |    
T  13698766 cacaaagcaataatacaggttccttccacaatccggtagtagtcttgtccctcttgcacttccaaggagagttcactaaaatcaatatatgattacaaat 13698865  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | ||||||||| ||||| || |||||||| |||||||||||| ||||||||| |||| ||||||    
T  13698866 gttcaagcacacaagcatgaaacttcaaa-tactcaagcacacaagcaagagatttcatatgct 13698928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13410988 - 13410886
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||||||| ||| ||||  |||||| |||||||| |||||||||||| || ||  |||||||||||||||||||||||||    
T  13410988 ttgtgttagctttttcttctttttaaaactaattccagagttcagagtctgatagagttcagagtctagaacaatgttcagagtcttatgcagcggataa 13410889  T
Q  101 tgt 103  Q
    |||    
T  13410888 tgt 13410886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 50721543 - 50721635
Alignment:
Q  213 agttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatg 305  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||  |||||||||||||||||||||| |||| ||||    
T  50721543 agttcactaaaatcaatatctgattacaattgctcaagcacaaaaacaagagatttcaatatactcaagcacaaaagcaagagatttcttatg 50721635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 50791306 - 50791214
Alignment:
Q  213 agttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatg 305  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||  |||||||||||||||||||||| |||| ||||    
T  50791306 agttcactaaaatcaatatctgattacaattgctcaagcacaaaaacaagagatttcaatatactcaagcacaaaagcaagagatttcttatg 50791214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 27849632 - 27849747
Alignment:
Q  190 gtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaag 289  Q
    |||||||||||||||  ||||||| ||||||| |||| | |||| | |||||||| | ||||||||||||||||||||||||| |||||||||||| |||    
T  27849632 gtcccccttgcacttccaaggagatttcactataatcca-atctgattacaattgtttaagcacaaaagcaagagacttcaaa-tactcaagcacacaag 27849729  T
Q  290 caagaggtttcctatgct 307  Q
    |||||| |||||||||||    
T  27849730 caagagatttcctatgct 27849747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 10851239 - 10851339
Alignment:
Q  207 aaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgc 306  Q
    |||||||||| |||||||||||||||| | ||||| ||||||||| ||| || || |||||||||| |||||||||||||  ||||||||||||||||||    
T  10851239 aaggagagtttactaaaatcaatatctgattacaaatgctcaagctcaatagaaatagacttcaaaatactcaagcacaactgcaagaggtttcctatgc 10851338  T
Q  307 t 307  Q
    |    
T  10851339 t 10851339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 14063786 - 14063619
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaat 242  Q
    |||||||||||||| | ||||||||||||| |||||| ||  ||||||||||||||||||  ||||||||||||||||||    ||||||| | |||||     
T  14063786 acaaaacaattataaaggttccttccacaaactggaagtagtcttgtcccccttgcacttccaaggagagttcactaaaaatgtaatatctgattacaac 14063687  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  || |||||||||||||||||||||||||||  ||||||| |||| ||||||    
T  14063686 tgctcactgctaaaactagaaagagacttcaaactactcaagcacaagtgcaagagatttcatatgct 14063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 17239720 - 17239554
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  ||||||||||||||||||  ||||| |||||||||||||  | |||| | ||||| |    
T  17239720 cacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcacttccaaggaaagttcactaaaatgtaaatctgattacaact 17239621  T
Q  244 gctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  17239620 gctcactgctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 17239554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 263
Target Start/End: Original strand, 11078125 - 11078236
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    ||||| ||| ||||||||||||||| |||| ||  | ||||||||||||||||  ||||||||||||||||||||||  ||| | ||||| |||||||||    
T  11078125 aattacacaggttccttccacaatccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatcaagttctgattacaaatgctcaagc 11078224  T
Q  252 acaaaagcaaga 263  Q
    ||| ||||||||    
T  11078225 acacaagcaaga 11078236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 13931357 - 13931519
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||| |||| |  ||||||||||||||| |||| ||  |  |||||| |||||| | |||||||| ||||||| |||| |  ||| | ||||| |    
T  13931357 cacaaaacagttatcctggttccttccacaatccggaagtagtccagtcccctttgcacatctaaggagatttcactataatccaattctgattacaaat 13931456  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||| ||||| | |||||||||    
T  13931457 gctcaagcacacaagcaagagacttcaaa-tactcaagcacacaagaaagagatatcctatgct 13931519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 308
Target Start/End: Original strand, 20724449 - 20724618
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc--aatatctaactacaa 241  Q
    ||||||||||||||| | ||||||||||||| | |||| ||  | ||||||||||||||||  |||||||||| |||||||    ||||||| | |||||    
T  20724449 cacaaaacaattatataggttccttccacaaaccggaagtagtcctgtcccccttgcacttccaaggagagtttactaaaaatgtaatatctgattacaa 20724548  T
Q  242 ttgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgcta 308  Q
     ||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  20724549 ctgctcactgctaaaattagcaagagacttcaaactactcaagcacaattgcaagagatttcctatgcta 20724618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 300
Target Start/End: Complemental strand, 29952234 - 29952074
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||| ||||||||| |||| ||||||||||||||  ||||||| | |||||     
T  29952234 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccctttgcactttcaaggggagttcactaaaatgtaatatctgattacaac 29952135  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttc 300  Q
    ||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| ||||    
T  29952134 tgctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttc 29952074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 300
Target Start/End: Complemental strand, 30001388 - 30001228
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||| ||||||||| |||| ||||||||||||||  ||||||| | |||||     
T  30001388 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccctttgcactttcaaggggagttcactaaaatgtaatatctgattacaac 30001289  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttc 300  Q
    ||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| ||||    
T  30001288 tgctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttc 30001228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 23538961 - 23538793
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||| ||||||||  ||||||||||||||||||    ||||||| | |||||    
T  23538961 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtccccattgcacttccaaggagagttcactaaaaatataatatctgattacaa 23538862  T
Q  242 ttgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||| ||  |||  ||||||| ||||||||||||||||||||||  ||||||| |||| ||||||    
T  23538861 ctgctcaatgctaaaactagcaagaaacttcaaactactcaagcacaactgcaagagatttcttatgct 23538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 3238053 - 3238158
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||||    
T  3238053 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaat 3238152  T
Q  243 tgctca 248  Q
    ||||||    
T  3238153 tgctca 3238158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 13939257 - 13939362
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||||||||||||||||| | |||| |   | ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||||    
T  13939257 cacaaagcaattatacaagttccttccacaaaccggaagttgtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaat 13939356  T
Q  243 tgctca 248  Q
    ||||||    
T  13939357 tgctca 13939362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 16879493 - 16879542
Alignment:
Q  255 aaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctat 304  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16879493 aaagcaagatacttcaaactactcaagcacaaaagcaagaggtttcctat 16879542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 6252782 - 6252949
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataacct-tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||   | ||||||||||||||||  ||||||| ||||||||||||||||| | | |||||     
T  6252782 cacaaatcaattatacaggttccttccacaaaccggaagtagtttctgtcccccttgcacttccaaggagatttcactaaaatcaatatttgattacaac 6252881  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     |||||  ||  |||  |||||||||||| ||||||||||| |||||  ||||||| |||||||||||    
T  6252882 agctcactgctaaaactagcaagagacttgaaactactcaatcacaactgcaagagatttcctatgct 6252949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 16031964 - 16032124
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc--aatatctaactacaattgctca 248  Q
    |||||||||| ||||||||||||| | | || ||  ||||||||| |||||||| |||| ||||||||||||||    ||||||||| ||||| ||||||    
T  16031964 caattatacaggttccttccacaaaccgaaagtagtcttgtcccc-ttgcacttctaagaagagttcactaaaaatgtaatatctaattacaactgctca 16032062  T
Q  249 a-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
      ||  |||  |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  16032063 ctgctaaaactagcaagagacttcaaattactcaagcacaagtgcaagagatttcctatgct 16032124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 12967669 - 12967837
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    |||||| |||||||||||||||||||||||| | | || ||  | ||||||| ||||||||| ||||||||||||||||||    ||||||| | |||||    
T  12967669 cacaaatcaattatacaagttccttccacaacccgaaagtagtcatgtccccattgcactttcaaggagagttcactaaaaatgtaatatctgattacaa 12967768  T
Q  242 ttgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     |  |||  ||  |||  ||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  12967769 ctagtcactgctaaaactagcaagagacttcaaactactcaagcacaactacaagagatttcctatgct 12967837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13698589 - 13698690
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| || ||||| |||||| | ||  || || |||||||||||  ||||| |||||||    
T  13698589 ttgtgttagctttttcttcttttt-aaactaagtccaatgttcagagtttgatagagttcaaattcaagaacaaagttcagagtcgaatgcaacggataa 13698687  T
Q  101 tgt 103  Q
    |||    
T  13698688 tgt 13698690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 17769657 - 17769588
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||| ||||| ||||||||||| ||||| |||||| ||||||||| |||||||||||    
T  17769657 tacaattgctcaagcacacaagcatgagacttcaaa-tactcgagcacacaagcaagagatttcctatgct 17769588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 19070958 - 19070889
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||| ||||| ||||||||||| ||||| |||||| ||||||||| |||||||||||    
T  19070958 tacaattgctcaagcacacaagcatgagacttcaaa-tactcgagcacacaagcaagagatttcctatgct 19070889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 26418474 - 26418306
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc--aatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||| ||||||||||||  ||| ||||||||||||||    ||||||| | |||||    
T  26418474 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtgccccttgcacttccaagtagagttcactaaaaatgtaatatctgattacaa 26418375  T
Q  242 ttgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||  ||  |||  ||||||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  26418374 ctgctcactgctaaaactagcaagagacttcaatctactcaagcacaactgcaagagatttcctatgct 26418306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 12963883 - 12963716
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcact-aaaatcaatatctaactacaat 242  Q
    |||||| |||||||||| |||||||||||||   |||| ||| | |||||||||| |||||  |||||||||||||| ||||  ||||||| | |||||     
T  12963883 cacaaagcaattatacaggttccttccacaaatcggaagtaatcatgtcccccttacacttccaaggagagttcactaaaaagtaatatctgattacaac 12963784  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||  | |||   ||||||||  || ||| |||||||||||||  ||||||| |||||||||||    
T  12963783 tgctcaatgataaacttagcaagagctttgaaattactcaagcacaactgcaagagatttcctatgct 12963716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 269
Target Start/End: Complemental strand, 16305838 - 16305721
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    ||||||||| ||||||||||||||  |||| ||  | ||||||||||||||||  ||| ||||  |||||||| ||  |||| | ||||| |||| ||||    
T  16305838 aattatacaggttccttccacaattcggaagtagacctgtcccccttgcacttccaagaagagaccactaaaaccagaatctgattacaaatgctgaagc 16305739  T
Q  252 acaaaagcaagagacttc 269  Q
    ||||||||||||||||||    
T  16305738 acaaaagcaagagacttc 16305721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 19250149 - 19249985
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    ||||||||||||||||| ||| |||||||||     || ||  | ||||||||||||||||  || || |||||||||||||  ||||||| | ||||||    
T  19250149 cacaaaacaattatacaggtttcttccacaaatcaaaagtagtcctgtcccccttgcacttccaatgaaagttcactaaaatataatatctgattacaat 19250050  T
Q  243 tgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctat 304  Q
    ||||||  ||  |||  |||||||||||||||||||||||||||||| | |||||| ||||||||    
T  19250049 tgctcactgctaaaactagcaagagacttcaaactactcaagcacaacaacaagagatttcctat 19249985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 2560547 - 2560627
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||    
T  2560547 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaa 2560627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 14006999 - 14007063
Alignment:
Q  242 ttgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgc 306  Q
    |||||||||||||| ||||||||| ||||||||||| | ||||||  ||||||||||||||||||    
T  14006999 ttgctcaagcacaatagcaagagatttcaaactactgatgcacaactgcaagaggtttcctatgc 14007063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 7833341 - 7833228
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    ||||| |||||||| |||||||||||||||||||||||||| | | ||||| | ||||||||| | | ||||||||||| || ||||||||||||   ||    
T  7833341 tcccctttgcacttctaaggagagttcactaaaatcaatatatgattacaaattctcaagcac-acatcaagagacttccaa-tactcaagcacacttgc 7833244  T
Q  291 aagaggtttcctatgc 306  Q
    ||||| | ||||||||    
T  7833243 aagagatgtcctatgc 7833228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27849460 - 27849558
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||| ||||||||||||||||||||||  ||| | ||| |||||| |||||||| ||||||||||||||| ||   |||| ||||| |||||||||||||    
T  27849460 ttgtattagctttttcttctttttaaac-taaattcaaagttcagagtctgatagagttcagagtctggaacaatattcacagtctaatgcagcggataa 27849558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 12396480 - 12396596
Alignment:
Q  194 cccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca-agc--acaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    |||||||||||  ||||||||||| ||||||||| ||||| | ||||||||||||  ||  | || |||||||||||||||| |||||||||||||   |    
T  12396480 cccttgcacttccaaggagagttcgctaaaatcactatctgattacaattgctcactgctaaaaatagcaagagacttcaaattactcaagcacaactac 12396579  T
Q  291 aagaggtttcctatgct 307  Q
    ||||| ||| |||||||    
T  12396580 aagagattttctatgct 12396596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 20645515 - 20645681
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa-tcaatatctaactacaat 242  Q
    |||||| |||||||||| ||| ||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||| |||| | ||||||| | |||||     
T  20645515 cacaaagcaattatacatgtttcttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcaccaaaatttaatatctgattacaac 20645614  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  |||||||||||||||| | |||||||||||  |||||||  ||||||||||    
T  20645615 tgctcactgctaaaactagcaagagacttcaaa-tgctcaagcacaactgcaagagacttcctatgct 20645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 6174697 - 6174784
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatat 231  Q
    |||||| |||||||||| ||| |||||| || | |||| ||    ||||||||||||||||  |||||||||||||||||||||||||    
T  6174697 cacaaagcaattatacatgtttcttccataaaccggaagtagttctgtcccccttgcacttccaaggagagttcactaaaatcaatat 6174784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8693117 - 8693214
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||| ||||| |||||||||||  ||||| ||  || ||| ||||||||||||||||| |||||||||  ||||||||||| || ||||||||||    
T  8693117 ttgtgttagtttttt-ttctttttaaac-taagtacagagtccagagtctgataaagttcagattctggagcaatgttcagagtctaattcagcggataa 8693214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9044986 - 9045083
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||| ||||| |||||||||||  ||||| ||  || ||| ||||||||||||||||| |||||||||  ||||||||||| || ||||||||||    
T  9044986 ttgtgttagtttttt-ttctttttaaac-taagtacagagtccagagtctgataaagttcagattctggagcaatgttcagagtctaattcagcggataa 9045083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 8874800 - 8874750
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  8874800 agcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 8874750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 12727033 - 12726951
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||| | |||||||| |||| | |||| | |  | ||||||||||||||||| |||||||||||||||||||    
T  12727033 cacaaaacaattatataggttccttctacaaaccggaagtcagtcctgtcccccttgcactttcaaggagagttcactaaaat 12726951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 13931230 - 13931327
Alignment:
Q  2 tgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||| |||||||||||||| ||| ||||| ||| || ||| |||||||| ||||||||||||   |||  ||||||||||| ||||||| |||||    
T  13931230 tgtgttagatttttcttcttttt-aaactaagttcaaagtccagagtctgatagagttcagagtctaatgcaatgttcagagtctaatgcagcagataa 13931327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 14393685 - 14393635
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  14393685 agcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 14393635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 25399052 - 25398974
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaa-ataaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||||||||||||||| |||||||||||| ||||||  ||  | |||||| |||||||||  |||||||||||||||    
T  25399052 cacaaaacaattatacaaattccttccacaaactggaagttagtcatgtccctcttgcacttccaaggagagttcacta 25398974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 6090088 - 6090168
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| | |||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  |||||||| |||||||||    
T  6090088 cacaaagccattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagctcactaaaa 6090168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 8693570 - 8693668
Alignment:
Q  207 aaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgc 306  Q
    ||||||| ||||||| |||| | |||| | ||||| |||||||||| | ||||||||||||||||| |||||||||||  || |||||| ||| ||||||    
T  8693570 aaggagatttcactataatcca-atctgattacaaatgctcaagcatacaagcaagagacttcaaa-tactcaagcactcaaacaagagattttctatgc 8693667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 9045457 - 9045555
Alignment:
Q  207 aaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgc 306  Q
    ||||||| ||||||| |||| | |||| | ||||| |||||||||| | ||||||||||||||||| |||||||||||  || |||||| ||| ||||||    
T  9045457 aaggagatttcactataatcca-atctgattacaaatgctcaagcatacaagcaagagacttcaaa-tactcaagcactcaaacaagagattttctatgc 9045554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 16305943 - 16305875
Alignment:
Q  32 agtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||| || ||| |||||||| |||||||| |||||| || |||| ||||||| |||||||||||||    
T  16305943 agtccaaagtccagagtctgatagagttcagattctggaacaaagtttagagtctaatgcagcggataa 16305875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 46797183 - 46797115
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| | |||| | |  ||||||||||||||||||| |||||||||||||||    
T  46797183 ttatacaggttccttccacaaaccggaagtcagtcttgtcccccttgcactttcaaggagagttcacta 46797115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 49643514 - 49643478
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||||| |||||||||||||||||||    
T  49643514 tgtcccccttgcactttcaaggagagttcactaaaat 49643478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 16879367 - 16879408
Alignment:
Q  4 tgttagctttttcttctttttaaaagtaagtccaatgttcag 45  Q
    |||||| |||||||||||||||||| |||||||| |||||||    
T  16879367 tgttagttttttcttctttttaaaattaagtccagtgttcag 16879408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 52919833 - 52919906
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||||||| ||| |||||||||   |||| ||  ||||||||||||||||||  ||||||||||| ||||||    
T  52919833 caattatacaggtttcttccacaaatcggaagtagtcttgtcccccttgcacttccaaggagagttcgctaaaa 52919906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 932343 - 932406
Alignment:
Q  243 tgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||| ||| | ||||||||||| ||||||| |||| ||||||||| |||| ||||||    
T  932343 tgctcaagcacacaagtacgagacttcaaa-tactcaatcacacaagcaagagatttcttatgct 932406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 1463841 - 1463873
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttc 269  Q
    |||||||||||||||||| ||||||||||||||    
T  1463841 tacaattgctcaagcacacaagcaagagacttc 1463873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 15848700 - 15848763
Alignment:
Q  243 tgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||| |||||||||||||||  | | ||||||||| ||||||||||  ||||||||||    
T  15848700 tgctcaagcactaaagcaagagacttccta-tgctcaagcactaaagcaagagacttcctatgct 15848763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 16879403 - 16879447
Alignment:
Q  57 gttcagagtctggagcagagttcagagtcttatgcagcggataat 101  Q
    ||||||| ||| || || |||||||||||||||||||||||||||    
T  16879403 gttcagaatcttgaacaaagttcagagtcttatgcagcggataat 16879447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16881477 - 16881577
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||| ||| ||||||||||||| ||||| |||||||| |||| ||  | | | | |||||||| ||| || ||  ||| |||||||||||||||||||||    
T  16881477 ttgttttaactttttcttctttataaaactaagtccagtgtttagaatgtcacagagttcagaatcttgaacaatgtttagagtcttatgcagcggataa 16881576  T
Q  101 t 101  Q
    |    
T  16881577 t 16881577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 17697063 - 17697135
Alignment:
Q  195 ccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagact 267  Q
    ||||||||||  ||||||| || |||||||||||||||| | ||||| |  |||||||| ||||| |||||||    
T  17697063 ccttgcacttccaaggagattttactaaaatcaatatctgattacaactattcaagcactaaagctagagact 17697135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 152 - 307
Target Start/End: Complemental strand, 16308501 - 16308346
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    ||||||||| ||||||||||||||| |||| ||  | ||||||||||||||||  || |||||||||||||||||||||||| | ||||||||||||||     
T  16308501 aattatacaggttccttccacaatccggaagtagtcctgtcccccttgcacttccaaagagagttcactaaaatcaatatctgattacaattgctcaaga 16308402  T
Q  252 acaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16308401 acaaaagcaagagacttcaaactagtcaagcacaaaagcaagaggttttctatgct 16308346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 13173101 - 13172985
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  13173101 tcccccttgcacttccaaggatagttcactaaaatcaatatctgattacaattgctcaagcacaaaaccaagagacttaaaactactcaagcacaaaagc 13173002  T
Q  291 aagaggtttcctatgct 307  Q
    ||||||||||| |||||    
T  13173001 aagaggtttccgatgct 13172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 152 - 283
Target Start/End: Original strand, 16411374 - 16411505
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    ||||||||| ||||||||||||||| |||| ||  | |||||| |||||||||  ||||||||||||||||||||||||||| | |||||||||||||||    
T  16411374 aattatacaggttccttccacaatccggaagtagtcctgtcccacttgcacttccaaggagagttcactaaaatcaatatctgattacaattgctcaagc 16411473  T
Q  252 acaaaagcaagagacttcaaactactcaagca 283  Q
    |||| |||||||||||||||||||||||||||    
T  16411474 acaatagcaagagacttcaaactactcaagca 16411505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 25687589 - 25687472
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaa-gcaagagacttcaaactactcaagcacaaaag 289  Q
    ||||||||||||||  ||||||||||||||||||||||||||  | |||||||| |||||||||||| |||||||||||||||||||||||||||||| |    
T  25687589 tcccccttgcacttcaaaggagagttcactaaaatcaatatcggattacaattggtcaagcacaaaaagcaagagacttcaaactactcaagcacaaatg 25687490  T
Q  290 caagaggtttcctatgct 307  Q
    ||||||||||||||||||    
T  25687489 caagaggtttcctatgct 25687472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 144 - 299
Target Start/End: Original strand, 5034652 - 5034806
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||| ||||||||||||||| |||  ||  | ||||||||||| ||||  ||||||| ||||||||| | ||||| | | ||||| |    
T  5034652 cacaaaacaattatacaggttccttccacaatccggaggtagtcctgtcccccttggacttccaaggagaattcactaaatt-aatatatgattacaaat 5034750  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggttt 299  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  5034751 gctcaagcacaaaagcaagagacatccaaatactcaagcacaaaagcaagaggttt 5034806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 19237833 - 19237668
Alignment:
Q  146 caaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattg 244  Q
    ||||||||||||||| ||||||||||||| | |||| ||  ||||||||||||||||||  || ||||||||||||||||  ||||||| | ||||||||    
T  19237833 caaaacaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcacttccaatgagagttcactaaaatgtaatatctgattacaattg 19237734  T
Q  245 ctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||  ||  |||  ||||| | ||||||||||||||||||||| ||||||||| |||||||||||    
T  19237733 ctcactgctaaaactagcaaaaaacttcaaactactcaagcacacaagcaagagatttcctatgct 19237668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 16105722 - 16105567
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| ||||||||||||||| |||| ||  | || || |||||||||| |||||||||||||||||||||||||||  | ||||| ||||||||    
T  16105722 caattatacaggttccttccacaatccggaagtagtcctgccctccttgcacttctaaggagagttcactaaaatcaatatcagattacaaatgctcaag 16105623  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     |||  || |||| |||||||| |||||||| ||| ||||||||| ||| |||||||    
T  16105622 aacactagaaagatacttcaaa-tactcaagtacacaagcaagagattttctatgct 16105567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 11792267 - 11792434
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    ||||||||||||||||| ||||||||||||| | |||| ||  ||||||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  11792267 cacaaaacaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 11792366  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   |||||||||||||||| |||| ||| ||||| |||||||  ||||||||||    
T  11792367 tgctcattgctaaacttagcaagagacttcaaattacttaagaacaaatgcaagagacttcctatgct 11792434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 5034849 - 5034911
Alignment:
Q  245 ctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5034849 ctcaagcacaaaaacaagagacttccaaatactcaagcacaaaagcaagaggtttcctatgct 5034911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 13261408 - 13261248
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattgctcaa 249  Q
    |||||||||| ||||||||||||| |||||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||| |||| |     
T  13261408 caattatacatgttccttccacaaactggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaactgcttac 13261309  T
Q  250 gcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
        |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  13261308 tgttaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 13261248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 21211344 - 21211264
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||||||||||||||||| | |||| ||  ||||||||||||||||||  ||||||||||||||||||    
T  21211344 cacaaagcaattatacaagttccttccacaaaccggaagtagtcttgtcccccttgcacttgcaaggagagttcactaaaa 21211264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 41843224 - 41843057
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| ||||||||||||||||||||| || | |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  41843224 cacaaagcaattatacaagttccttccataaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 41843125  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  ||||||||| ||||||||||||||||||||  ||||||  |||| ||||||    
T  41843124 tgctcactgctaaaactagcaagagatttcaaactactcaagcacaactgcaagatatttcatatgct 41843057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5034527 - 5034629
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||  |||||||||||||||||| ||||||||||||| || |||||||| |||||||| |||||| || |||| | ||| ||||||||  |||||    
T  5034527 ttgtgttaaatttttcttctttttaaaactaagtccaatgtttagagtctgatagagttcagaatctggaacaaagttaaaagttttatgcagttgataa 5034626  T
Q  101 tgt 103  Q
    |||    
T  5034627 tgt 5034629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 11572913 - 11572797
Alignment:
Q  190 gtcccccttgcacttttaaggagagtt-cactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaa 288  Q
    |||||||||||||||  ||||||| || ||||| |||| | |||| | ||||| |||||||||||| ||||||||||||||||| |||||||||||| ||    
T  11572913 gtcccccttgcacttccaaggagattttcactataatcca-atctgattacaaatgctcaagcacacaagcaagagacttcaaa-tactcaagcacacaa 11572816  T
Q  289 gcaagaggtttcctatgct 307  Q
    ||||||| |||| ||||||    
T  11572815 gcaagagatttcatatgct 11572797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 294
Target Start/End: Complemental strand, 18362285 - 18362181
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaa 288  Q
    |||||||||||| |||  ||||||||||||||||||| ||||||| | ||||| | |||||||||| ||| || |||||| ||| |||||||||||| ||    
T  18362285 tgtcccccttgcccttccaaggagagttcactaaaattaatatctgattacaaattctcaagcacacaagtaaaagactt-aaattactcaagcacacaa 18362187  T
Q  289 gcaaga 294  Q
    ||||||    
T  18362186 gcaaga 18362181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 25806805 - 25806950
Alignment:
Q  162 gttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaa 261  Q
    ||||||||||||||| |||| ||   | ||||| |||||||||  || |||| ||||||| |||| | |||| | ||||| |||||||||||| ||||||    
T  25806805 gttccttccacaatccggaagtagtttagtccctcttgcacttccaacgagatttcactataatcca-atctgattacaaatgctcaagcacacaagcaa 25806903  T
Q  262 gagacttcaa--actactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||  ||| |||||||||| ||||||||| |||||||||||    
T  25806904 gagacttcaaatact-ctcaagcacacaagcaagagatttcctatgct 25806950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 307
Target Start/End: Complemental strand, 13034630 - 13034470
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataa--ccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaattgctca 248  Q
    ||||||||| ||||||||||||| | |||| | |  |||| ||||||||||||||  |||||||||||||||||||  ||||||| | ||||| | ||||    
T  13034630 aattatacaggttccttccacaaaccggaagtcagtcctt-tcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaacttctca 13034532  T
Q  249 a-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
      ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  13034531 ctgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 13034470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 7488657 - 7488537
Alignment:
Q  190 gtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctc---aagcacaaaagcaagagacttcaaactactcaagcacaa 286  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||| ||||| || ||   |  || || ||||| |||||||||| |||||||||||||    
T  7488657 gtcccccttacacttccaaggagagttcactaaaatcaatatctaattacaaatgttcactactcaaaatagcaaaagacttcaaattactcaagcacaa 7488558  T
Q  287 aagcaagaggtttcctatgct 307  Q
       |||||| |||||||||||    
T  7488557 tttcaagagatttcctatgct 7488537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 23125426 - 23125495
Alignment:
Q  230 atctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttc 300  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||    
T  23125426 atctaattacaaatgctcaagcacacaagcaagagacttcaaa-tactcaagcacacaagcaagagatttc 23125495  T

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Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 16310707 - 16310540
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||| ||  | |||||||||||||||||  ||||||| | |||||     
T  16310707 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcaattccatggagagttcactaaaatgtaatatctgattacaac 16310608  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||| ||||||    
T  16310607 tgctcactactaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcttatgct 16310540  T

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Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 16317354 - 16317188
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    |||||| |||| ||||| ||||||||||||| | |||| ||  |  |||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  16317354 cacaaagcaatcatacaggttccttccacaaacaggaagtagtcc-gtcccccttgcacttccaaggagagttcactaaaatttaatatctgattacaac 16317256  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  16317255 tgctcactgctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 16317188  T

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Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 1878927 - 1878858
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||| |||||||||| ||||||||||||| ||| |||| ||||||| ||||||||| |||||||||||    
T  1878927 tacaatttctcaagcacagaagcaagagactt-aaaatactgaagcacacaagcaagagatttcctatgct 1878858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 4820844 - 4820922
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaa 222  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||    
T  4820844 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgcacttccaaggagagttcactaa 4820922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 44466451 - 44466533
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| | |  ||||||||||||||||||  |||||||||||||||||||    
T  44466451 cacaaagcaattatacaggttccttccacaaaccggaagtcagtcttgtcccccttgcacttccaaggagagttcactaaaat 44466533  T

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Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 5001626 - 5001545
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| |||||||||||||   | || ||  ||||||||||||||||||  |||||||||||||||||||    
T  5001626 cacaaagcaattatacaggttccttccacaaatcgaaagtagtcttgtcccccttgcacttccaaggagagttcactaaaat 5001545  T

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Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 10883971 - 10883890
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||| ||||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||    
T  10883971 cacaaagcaattatacaggttcctttcacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaat 10883890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 286
Target Start/End: Complemental strand, 13259195 - 13259056
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattgctcaa 249  Q
    |||||||||| |||||||||||||   |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||| ||||||     
T  13259195 caattatacaggttccttccacaaatcggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaactgctcac 13259096  T
Q  250 gcacaaa---agcaagagacttcaaactactcaagcacaa 286  Q
        |||   |||||||||||||||| |||||||||||||    
T  13259095 tgttaaacttagcaagagacttcaaattactcaagcacaa 13259056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 286
Target Start/End: Complemental strand, 13266535 - 13266396
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattgctcaa 249  Q
    |||||||||| |||||||||||||   |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||| ||||||     
T  13266535 caattatacaggttccttccacaaatcggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaactgctcac 13266436  T
Q  250 gcacaaa---agcaagagacttcaaactactcaagcacaa 286  Q
        |||   |||||||||||||||| |||||||||||||    
T  13266435 tgttaaacttagcaagagacttcaaattactcaagcacaa 13266396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 13302218 - 13302299
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||| |||||||||||||    
T  13302218 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggatagttcactaaaat 13302299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23125190 - 23125280
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcag 93  Q
    |||||||||||||||||||||||  ||| ||||||||| |||||   | ||||||||||||||| ||||||||  ||||| ||||| ||||||    
T  23125190 ttgtgttagctttttcttctttt--aaactaagtccaaagttcatactttgataaagttcagagcctggagcaatgttcaaagtctaatgcag 23125280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 29936145 - 29936039
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa---tcaatatctaactaca 240  Q
    ||||||||||||||||| ||||||||||||| | |||| ||  | ||| ||||||||||||  ||||||||||||||||||     ||||||||| ||||    
T  29936145 cacaaaacaattatacaggttccttccacaaaccggaagtagtcctgt-ccccttgcacttccaaggagagttcactaaaaaatgtaatatctaattaca 29936047  T
Q  241 attgctca 248  Q
    ||||||||    
T  29936046 attgctca 29936039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 4493932 - 4494012
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| ||||||| ||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||    
T  4493932 cacaaagcaattatacaggttcctttcacaaaccggaagtattcctgtcccccttgcacttcaaaggagagttcactaaaa 4494012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 12223102 - 12223035
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatg 305  Q
    ||||||||||||| |||| ||||||||||||| ||| |||||||||||| ||||||||| ||| |||||    
T  12223102 tacaattgctcaaacacacaagcaagagactttaaa-tactcaagcacacaagcaagagattttctatg 12223035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 12367536 - 12367456
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||| |||||||||| ||||||||||||| |||||| ||    ||||||||||||||||  ||||| |||||||||||||    
T  12367536 acaaagcaattatacaggttccttccacaaactggaagtagttatgtcccccttgcacttccaaggaaagttcactaaaat 12367456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 14187054 - 14187126
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    ||||||||| |||||||||||||   |||| ||  ||||||||||||||||||  ||||||||||||||||||    
T  14187054 aattatacaggttccttccacaaatcggaagtagtcttgtcccccttgcacttccaaggagagttcactaaaa 14187126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 33604264 - 33604344
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  |||||||||||| |||||  ||||||||||| ||||||    
T  33604264 cacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttccacttccaaggagagttcgctaaaa 33604344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 2914411 - 2914305
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaa 241  Q
    |||||| |||||||| | ||||||||||||| | |||| | |  | ||||||||||||||||| ||||||||||||||| |||  ||||||| | |||||    
T  2914411 cacaaagcaattatataggttccttccacaaaccggaagtcagtcatgtcccccttgcactttcaaggagagttcactataatgtaatatctgattacaa 2914312  T
Q  242 ttgctca 248  Q
    |||||||    
T  2914311 ttgctca 2914305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 13027584 - 13027534
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  13027584 agcaagagacttcaaactactcaagcacaactacaagagatttcctatgct 13027534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 13731475 - 13731393
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||| ||||||||| |||||| | |  | ||||||||||||||||  |||||||||||||||||||    
T  13731475 cacaaagcaattatacaggtttcttccacaagctggaagtcagtcatgtcccccttgcacttccaaggagagttcactaaaat 13731393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 13879527 - 13879605
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||| |||||||||| ||||||||||||| | |||| | |  | |||||||||||||||| ||||||||||||||||    
T  13879527 cacaaagcaattatacaggttccttccacaaaccggaagtcagtcctgtcccccttgcacttctaaggagagttcacta 13879605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 21691835 - 21691885
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  21691835 agcaagagacttcaaaatactcaagcacaactgcaagagatttcctatgct 21691885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 13645808 - 13645889
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | | || ||  | ||||||||||||||||  ||| |||||||||||||||    
T  13645808 cacaaagcaattatacaggttccttccacaaaccgtaagtagtcctgtcccccttgcacttccaagcagagttcactaaaat 13645889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 15304129 - 15304185
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaaga 294  Q
    |||||||||||||||||| ||||||||||||||| | | |||||||||| ||||||||    
T  15304129 tacaattgctcaagcacacaagcaagagacttcata-tgctcaagcacacaagcaaga 15304185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 30025292 - 30025373
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||||| |||||||| |||| | |||| ||  |||||||||||| |||||  |  ||||||||||||||||    
T  30025292 cacaaaacaattatacatgttccttcaacaaaccggaagtagtcttgtcccccttccacttccagagagagttcactaaaat 30025373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 39285303 - 39285222
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||||||||||||| ||||||||||||| | |||| ||  | |||| ||||| |||||  || ||||||||||||||||    
T  39285303 cacaaaacaattatacaggttccttccacaaaccggaagtagtcctgtctcccttccacttccaaagagagttcactaaaat 39285222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 2266303 - 2266235
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataa-ccttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| | |||| | | |||||||||||||||||||  |||||||||||||||    
T  2266303 ttatacaggttccttccacaaaccggaagtcagccttgtcccccttgcacttccaaggagagttcacta 2266235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 9802665 - 9802722
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||||||||||||||||| ||||||||||||||  | | |||||||||| |||||||||    
T  9802665 tacaattgctcaagcacataagcaagagacttccta-tgctcaagcacacaagcaagag 9802722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 11015451 - 11015519
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| ||||||| |||| | ||||||||||||||| |||||||||||| ||||||||  |||||||||||    
T  11015451 tacaaatgctcaa-cacacaggcaagagacttcaaa-tactcaagcacacaagcaagatatttcctatgct 11015519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 13027653 - 13027619
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaa 223  Q
    ||||||||||||||||| |||||||||||||||||    
T  13027653 tgtcccccttgcactttcaaggagagttcactaaa 13027619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 13473180 - 13473130
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| ||||||||||||||||||||||||  ||||||| ||| |||||||    
T  13473180 agcaaaagacttcaaactactcaagcacaagtgcaagagattttctatgct 13473130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 16308583 - 16308537
Alignment:
Q  57 gttcagagtctggagcagagttcagagtcttatgcagcggataatgt 103  Q
    |||||||||||||| || |||| |||||||||||||| |||||||||    
T  16308583 gttcagagtctggaacaaagtttagagtcttatgcagaggataatgt 16308537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 21284174 - 21284092
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | || | | |  | ||||||||||||||||  |||||||||||||||||||    
T  21284174 cacaaagcaattatacatgttccttccacaaaccgggagtcagtcctgtcccccttgcacttccaaggagagttcactaaaat 21284092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 24787718 - 24787800
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||| |||||||||||| |||||||||||||   |||| | |  | ||||||||||||||||  |||||||||||||||||||    
T  24787718 cacacaacaattatacaggttccttccacaaatcggaagtcagtcctgtcccccttgcacttccaaggagagttcactaaaat 24787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 10257769 - 10257713
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaaga 294  Q
    ||||||| | |||||||| ||||||||||| |||| ||||||||||||| ||||||||    
T  10257769 tacaatttcgcaagcacacaagcaagagacgtcaa-ctactcaagcacacaagcaaga 10257713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 2501699 - 2501624
Alignment:
Q  190 gtcccccttgcacttttaaggagagtt-cactaaaatcaatatctaactacaattgctcaagcacaaaagcaagaga 265  Q
    |||||||||||||||  ||||||| || ||||| |||| | |||| | |||||||||||||||||| ||||||||||    
T  2501699 gtcccccttgcacttccaaggagattttcactataatcca-atcttattacaattgctcaagcacacaagcaagaga 2501624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 8182327 - 8182395
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| | |||| | |  ||||||||||||||||||  |||||||||||||||    
T  8182327 ttatacaggttccttccacaaaccggaagtcagtcttgtcccccttgcacttccaaggagagttcacta 8182395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9761919 - 9761999
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagt 84  Q
    |||||||||||||| |||||||| ||   ||||||||| ||||||  ||||||| |||||| |||||| || ||||||||||||    
T  9761919 ttgtgttagctttt-cttcttttgaac--taagtccaaagttcagattctgatagagttcaaagtctgaagtagagttcagagt 9761999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 13172988 - 13172937
Alignment:
Q  243 tgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||||||||||||  ||||||||||||  | ||||||||||||||||||||||    
T  13172988 tgctcaagcacaactgcaagagacttccta-tactcaagcacaaaagcaagag 13172937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 14424884 - 14424952
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| |||||| | |  ||||||||||||||||||  || ||||||||||||    
T  14424884 ttatacaggttccttccacaaactggaagtcagtcttgtcccccttgcacttccaaagagagttcacta 14424952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 15574333 - 15574301
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||||||||||||| ||||||||||||||||    
T  15574333 tgtcccccttgcacttctaaggagagttcacta 15574301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 16308616 - 16308572
Alignment:
Q  7 tagctttttcttctttttaaaagtaagtccaatgttcagtgtctg 51  Q
    ||||||||||||||||| ||||  ||||||||||||||| |||||    
T  16308616 tagctttttcttcttttcaaaaccaagtccaatgttcagagtctg 16308572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 22382842 - 22383005
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||| ||||||||||||||| |||| ||  | ||||||||| || |||  ||||||||||||||||||||||||||  | |||||||    
T  22382842 cacaaaacaattatacaggttccttccacaatccggaagtagtcctgtccccctggctcttccaaggagagttcactaaaatcaatatcggattacaatt 22382941  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22382942 tctcaagcataaaagcaagagacttcaaactactcaagcacaaaagcaagacgtttcctatgct 22383005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 21845520 - 21845682
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattg 244  Q
    ||||| ||||||||||||||||||||||||||  ||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||| | |||| |||    
T  21845520 acaaagcaattatacaagttccttccacaatcgagaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacagttg 21845619  T
Q  245 ctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||    
T  21845620 ctcaagcacaaaagcaagagactttaaactactcaagcataaaagtaagtggtttcctatgct 21845682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 22797784 - 22797947
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||| |||||||||||||||   || ||  | | ||||||||||||||  ||||||||||| | ||||||||||||| | ||||| |    
T  22797784 cacaaaacaattatacaggttccttccacaatccaaaagtagtcatatcccccttgcacttccaaggagagttcgccaaaatcaatatctgattacaaat 22797883  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  22797884 gctcaagcacaaaaggaagagacttcaaactacttaagcccaaaagcaagaggtttcctatgct 22797947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 21911572 - 21911409
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| |||| |||||||||| |||| ||  | ||||| ||||||||||  |||||||||| |||||||||||||||| | ||||| |    
T  21911572 cacaaatcaattatacatgttcattccacaatccggaagtagtcctgtcctccttgcacttccaaggagagtttactaaaatcaatatctgattacaaat 21911473  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||  ||||||||||||| || |||||||||||| ||||||||| |||||||||||    
T  21911472 gctcaagcacactagcaagagacttccaaatactcaagcacacaagcaagagatttcctatgct 21911409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 20567527 - 20567683
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| ||||||||||| |||||||| ||  | ||| ||||||||||||  ||  ||||||||||||| ||||||||| | ||| ||||||||||    
T  20567527 caattatacaggttccttccacgatctggaagtagtcatgtaccccttgcacttccaaatagagttcactaaagtcaatatctgattaccattgctcaag 20567626  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | ||| |||||||||| |||||||||||||||||||  ||||||| ||||| |||||    
T  20567627 ctcaatagcaagagacatcaaactactcaagcacaactgcaagagatttcccatgct 20567683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 10899203 - 10899093
Alignment:
Q  195 ccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaaga 294  Q
    ||||||||||  |||||||||||||||||||||||| |||| ||||| ||||||| | ||| ||||||||||||||||||||||||||||||  ||||||    
T  10899203 ccttgcacttccaaggagagttcactaaaatcaatacctaattacaaatgctcaaactcaatagcaagagacttcaaactactcaagcacaactgcaaga 10899104  T
Q  295 ggtttcctatg 305  Q
    | |||||||||    
T  10899103 gatttcctatg 10899093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 22797638 - 22797737
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||  |||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||    
T  22797638 ttgtgttagttttttcttctttttaaaactaagtctaatgttcatagtctgatagagttcagagtctggaacagggttcaaagtcttatgcagcggataa 22797737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 15671310 - 15671165
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| |||||||| |||||||  || ||  | ||||||||||||||||  ||||||||||||||||||||||||||| | ||||| ||||||||    
T  15671310 caattatacaggttccttctacaatctaaaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaaatgctcaag 15671211  T
Q  251 cacaaaagc--aagagacttcaaactactcaagcacaaaagcaagag 295  Q
    |||| ||||  || |||||||||| |||| ||||||| |||||||||    
T  15671210 cacacaagcaaaaaagacttcaaa-tacttaagcacacaagcaagag 15671165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 23185045 - 23184878
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    |||||| |||||||| | ||  ||||||||| | |||| ||  | ||||||||||||||||| |||||||||||||||||||  ||||||| | |||||     
T  23185045 cacaaagcaattatataggtctcttccacaaaccggaagtagtcatgtcccccttgcactttcaaggagagttcactaaaatgtaatatctgattacaac 23184946  T
Q  243 tgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  || ||||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  23184945 tgctcactgctcaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 23184878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 23596308 - 23596141
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    |||||| |||||||| | ||  ||||||||| | |||| ||  | ||||||||||||||||| |||||||||||||||||||  ||||||| | |||||     
T  23596308 cacaaagcaattatataggtctcttccacaaaccggaagtagtcatgtcccccttgcactttcaaggagagttcactaaaatgtaatatctgattacaac 23596209  T
Q  243 tgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  || ||||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  23596208 tgctcactgctcaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 23596141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 265
Target Start/End: Original strand, 25918144 - 25918258
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    ||||||||||||||| ||||||||||||||| ||  | || | ||||| |||||  |||||||||||||||||||||  |||||| ||||| ||||||||    
T  25918144 caattatacaagttctttccacaatctggaagtagtcctgcctcccttacacttccaaggagagttcactaaaatcagaatctaattacaaatgctcaag 25918243  T
Q  251 cacaaaagcaagaga 265  Q
    |||| ||||||||||    
T  25918244 cacacaagcaagaga 25918258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 300
Target Start/End: Original strand, 18702097 - 18702258
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    ||||||||||||||||| ||||||||||||| | | || ||  | ||||||||||||||||  ||||||||||||||||||    ||||||| | |||||    
T  18702097 cacaaaacaattatacaggttccttccacaaaccgaaagtagtcatgtcccccttgcacttccaaggagagttcactaaaaatgtaatatctgattacaa 18702196  T
Q  242 ttgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttc 300  Q
    |||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| ||||    
T  18702197 ttgctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttc 18702258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21845395 - 21845498
Alignment:
Q  1 ttgtgttagctttttcttcttttt-aaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggata 99  Q
    |||||||||||||||||| ||||| |||| |||||||| ||||||| || ||||| |||||| ||||| || || |||||||||||||| ||||||||||    
T  21845395 ttgtgttagctttttctttttttttaaaactaagtccagtgttcagagtttgatagagttcatagtcttgaacaaagttcagagtcttacgcagcggata 21845494  T
Q  100 atgt 103  Q
    ||||    
T  21845495 atgt 21845498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 24376463 - 24376631
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | |||||||||||||||| |||||||||||||||||||    ||||||| | |||||    
T  24376463 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttctaaggagagttcactaaaaatgtaatatctgattacaa 24376562  T
Q  242 ttgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  24376563 ctgctcacttctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 24376631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 26367150 - 26366984
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaatt 243  Q
    ||||| ||||||||||||||||||||||||   | || ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||| |    
T  26367150 acaaagcaattatacaagttccttccacaaatcgaaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatcttattacaact 26367051  T
Q  244 gctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | |||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  26367050 gttcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 26366984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 19539773 - 19539940
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||||||  | |||||| |||| ||||  |||||||||||||||||||  ||||||| | |||||     
T  19539773 cacaaagcaattatacaggttccttccacaaaccggaaatagtcctgtcccgcttgaacttccaaggagagttcactaaaatgtaatatctgattacaac 19539872  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  19539873 tgctcactgctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 19539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 39038384 - 39038217
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    ||||| |||||||||| ||||||||||||| | |||| | |  | |||||| |||||||||  |||||||||||||||||||  ||||||| | |||||     
T  39038384 acaaatcaattatacatgttccttccacaaaccggaagtcagtcctgtcccgcttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 39038285  T
Q  243 tgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  39038284 tgctcattgcttaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 39038217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 307
Target Start/End: Complemental strand, 41122384 - 41122262
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattgctcaagcacaaa---agcaagagacttcaaactactcaagcac 284  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||| | ||||||||||||     |||   ||||||||||||||||||||||||||||    
T  41122384 tgtcccccttgcactttcaaggagagttcactaaaatgtaatatctgattacaattgctcactgttaaaactagcaagagacttcaaactactcaagcac 41122285  T
Q  285 aaaagcaagaggtttcctatgct 307  Q
    ||  ||||||  |||||||||||    
T  41122284 aactgcaagatatttcctatgct 41122262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 18431681 - 18431514
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||||||||| |||| ||||||||||||| | |||| ||  ||||||||| ||||||||  || ||||||||||||||||  ||||||| | |||||     
T  18431681 cacaaaacaattgtacaggttccttccacaaaccggaagtagtcttgtccccgttgcacttccaatgagagttcactaaaatgtaatatctgattacaac 18431582  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   ||||||||||||||||||||||||| ||||  ||||||| ||| |||||||    
T  18431581 tgctcactgttaaaactagcaagagacttcaaactactcaagtacaactgcaagagattttctatgct 18431514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 21537929 - 21537848
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  ||||||||||||||||||  |||||||||||||||||||    
T  21537929 cacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcacttccaaggagagttcactaaaat 21537848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 24843613 - 24843728
Alignment:
Q  195 ccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagca 291  Q
    ||||||||||  ||||||||||||||||||||||||| | | ||||| ||||||  || ||||  ||||||||||||||||||| ||||||||||  |||    
T  24843613 ccttgcacttccaaggagagttcactaaaatcaatatttgattacaaatgctcactgctcaaaatagcaagagacttcaaactaatcaagcacaactgca 24843712  T
Q  292 agaggtttcctatgct 307  Q
    |||| |||| ||||||    
T  24843713 agagatttcttatgct 24843728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 303
Target Start/End: Original strand, 24838462 - 24838624
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| |||||||||||||   |||| |     ||||||||||||||||  ||||||||||||||||||||||||||| | |||||      
T  24838462 cacaaatcaattatacatgttccttccacaaatcggaagttgttatgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaaca 24838561  T
Q  244 gctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttccta 303  Q
    | |||  || ||||  || ||||||||||||| |||||||||||||  ||||||| |||||||    
T  24838562 gttcactgctcaaaataggaagagacttcaaaatactcaagcacaactgcaagagatttccta 24838624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 307
Target Start/End: Complemental strand, 24851361 - 24851239
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaattgctcaa-gcacaaa--agcaagagacttcaaactactcaagcac 284  Q
    ||||||||||||||||  |||||||||||||||||||  ||||||| | ||||| ||||||  ||  |||  |||||||||||||||||||||||||||     
T  24851361 tgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaactgctcactgctaaaactagcaagagacttcaaactactcaagcat 24851262  T
Q  285 aaaagcaagaggtttcctatgct 307  Q
    ||  ||||||| |||||||||||    
T  24851261 aactgcaagagatttcctatgct 24851239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 22271489 - 22271656
Alignment:
Q  146 caaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc---aatatctaactacaat 242  Q
    |||| |||||||| | ||||||||||||| | |||| ||  | ||||||||||| ||||  ||||||||||||||||||     ||||||| | |||||     
T  22271489 caaagcaattatataggttccttccacaaaccggaagtagtcctgtcccccttggacttcaaaggagagttcactaaaaagtgtaatatcttattacaac 22271588  T
Q  243 tgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  22271589 tgctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 22271656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 24778752 - 24778810
Alignment:
Q  167 ttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  24778752 ttccacaaactggaaatagtcttgtcccccttgcactttcaaggagagttcactaaaat 24778810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 14794485 - 14794386
Alignment:
Q  193 ccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaa 292  Q
    ||||||||||||  ||||||| ||||||| |||| | |||| | ||||| |||||||||||| ||| ||||||||||||| |||||||||||||||| ||    
T  14794485 ccccttgcacttccaaggagatttcactataatcca-atctgattacaaatgctcaagcacacaagtaagagacttcaaa-tactcaagcacaaaagtaa 14794388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 25188755 - 25188923
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaa 241  Q
    |||||||||| |||||| ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||| ||||||||  ||||||| | |||||    
T  25188755 cacaaaacaagtatacaggttccttccacaaaccggaagtcagtcatgtcccccttgcacttccaaggagagtttactaaaatgtaatatctgattacaa 25188854  T
Q  242 ttgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||  ||  |||  ||||||||||||||||||| ||||||||||  ||||||| ||| |||||||    
T  25188855 ctgctcactgctaaaactagcaagagacttcaaactattcaagcacaactgcaagagattttctatgct 25188923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 10010495 - 10010415
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | |||||||||| |||||| ||||||||||||||||||    
T  10010495 cacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccccttacactttcaaggagagttcactaaaa 10010415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 17964008 - 17963929
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||| |||||||||| |||||||||| || | |||| ||  ||||||||||||||||||||||||| |||||||||||||    
T  17964008 acaaagcaattatacaggttccttccataacc-ggaagtagtcttgtcccccttgcacttttaaggaaagttcactaaaat 17963929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 22257558 - 22257663
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||| | |||||||||||||   |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||||| |||||     
T  22257558 cacaaagcaattatataggttccttccacaaatcggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctaattacaac 22257657  T
Q  243 tgctca 248  Q
    ||||||    
T  22257658 tgctca 22257663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 27296842 - 27296953
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaat--caatatctaactacaattgctcaa-gcacaaa--agcaagagacttcaaactactcaagca 283  Q
    ||||||||||||||||  ||||||||||||||||||   |||||||| | ||||| ||||||  ||  |||  |||||||||||||||||||||||||||    
T  27296842 tgtcccccttgcacttccaaggagagttcactaaaaatgcaatatctcattacaactgctcactgctaaaactagcaagagacttcaaactactcaagca 27296941  T
Q  284 caaaagcaagag 295  Q
    |||  |||||||    
T  27296942 caactgcaagag 27296953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 40781833 - 40781914
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  ||||||||||||||||||  ||  |||||||||||||||    
T  40781833 cacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcacttccaataagagttcactaaaat 40781914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 28141337 - 28141265
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    ||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||    
T  28141337 aattatacatgttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaa 28141265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 19321057 - 19320956
Alignment:
Q  190 gtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaag 289  Q
    |||||||||||||||  ||||||| |||||||||||| |  ||| | ||||| |||||||||||| |||||||| | |||||| |||||||| ||| |||    
T  19321057 gtcccccttgcacttccaaggagatttcactaaaatctagttctgattacaa-tgctcaagcacataagcaagataattcaaa-tactcaagtacacaag 19320960  T
Q  290 caag 293  Q
    ||||    
T  19320959 caag 19320956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25917943 - 25918041
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||| ||| |||||| |  |||||  |||||||||||||||||  ||| ||||  ||||||||||| ||| ||| |||||    
T  25917943 ttgtgttagctttttcttcttttt-aaactaagtctagagttcaaagtctgataaagttcagatcctgaagcaatgttcagagtctaatgtagcagataa 25918041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 20569494 - 20569412
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| | |  ||||||||||| ||||||  |||||||||||||||||||    
T  20569494 cacaaagcaattatacaggttccttccacaaaccggaagtcagtcttgtccccctagcacttccaaggagagttcactaaaat 20569412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 22682807 - 22682950
Alignment:
Q  163 ttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagtt-cactaaaatcaatatctaactacaattgctcaagcacaaaagcaa 261  Q
    |||||||||||||| |||| ||  |  |||||||||||||||  ||||||| || ||||| |||| | || | | || || |||||||||||| |||| |    
T  22682807 ttccttccacaatccggaagtagtccagtcccccttgcacttccaaggagattttcactataatcta-atttgattaaaaatgctcaagcacacaagcta 22682905  T
Q  262 gagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||| ||| |||||||||||| || |||||| |||||||||||    
T  22682906 gagacttaaaa-tactcaagcacacaaccaagagatttcctatgct 22682950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 25038004 - 25037923
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||| |||||||||| ||||||||||||| | |||||| |  | |||| |||||||||||  |||||||||||||||||||    
T  25038004 acaaagcaattatacaggttccttccacaaaccggaaatcagtcatgtcacccttgcacttccaaggagagttcactaaaat 25037923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 25828519 - 25828599
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | || |||||||||||||  |||||||||||||||||||    
T  25828519 cacaaaccaattatacaggttccttccacaaaccggaagtagtcctg-cccccttgcacttccaaggagagttcactaaaat 25828599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 26623190 - 26623117
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||||||| |||| |||||||| |||||| ||  | ||||||||||||||||  |||||||||||| |||||    
T  26623190 caattatacatgttctttccacaaactggaagtagtcatgtcccccttgcacttccaaggagagttcattaaaa 26623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 22188846 - 22188768
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataacctt-gtcccccttgcacttttaaggagagttcacta 221  Q
    |||||| |||||||||| ||| ||||||||| | |||||| |  || |||||||||||||||  |||||||||||||||    
T  22188846 cacaaagcaattatacaggtttcttccacaaaccggaaatcagttttgtcccccttgcacttccaaggagagttcacta 22188768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 174
Target Start/End: Original strand, 38631110 - 38631140
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaa 174  Q
    |||||||||||||||||||||||||||||||    
T  38631110 cacaaaacaattatacaagttccttccacaa 38631140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 14580968 - 14581000
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||||||||||||| ||||||||||||||||    
T  14580968 tgtcccccttgcacttataaggagagttcacta 14581000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 15671455 - 15671360
Alignment:
Q  4 tgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||||||||| |||| |||||  |||||| |  |||||| |||||||||||||||||   |||| ||  ||||||||||| ||| |||||||||    
T  15671455 tgttagctttttcatcttcttaaac-taagtctagagttcagagtctgataaagttcagatcttggaacaatgttcagagtctaatggagcggataa 15671360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 28701909 - 28701877
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||||||||||||| |||||||||||||||    
T  28701909 tgtcccccttgcactttcaaggagagttcacta 28701877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 1603 - 1458
Alignment:
Q  162 gttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaa 261  Q
    |||||||| ||||||||||| ||  |||||| ||| |||||||  ||||||||||||||| ||||||||| | | |||||||||||||||||||||||||    
T  1603 gttccttcaacaatctggaagtagtcttgtcacccatgcacttccaaggagagttcactataatcaatatttgattacaattgctcaagcacaaaagcaa 1504  T
Q  262 gagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  1503 gagacttcaaattactcaagcacaaaagcaagaggtttcctatgct 1458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 26120598 - 26120437
Alignment:
Q  146 caaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgc 245  Q
    |||| |||||||||| ||||||||||||||| |||| ||  | ||||||||||| ||||  |||||||  |||||||||||| ||||| | ||||||||     
T  26120598 caaatcaattatacaggttccttccacaatccggaagtagtcctgtcccccttgtacttccaaggagaagtcactaaaatcattatctgattacaattga 26120499  T
Q  246 tcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26120498 tcaatcacaaaagcaagagacttcaaactactcaagcacaaaagtaagaggtttcctatgct 26120437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 20968606 - 20968768
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||| |||| ||  | ||||| ||||||||||  ||| ||||||||||||| ||||||||| | ||||| |    
T  20968606 cacaaatcaattatacaggttccttccacaatccggaagtagtcatgtcctccttgcacttccaagcagagttcactaaa-tcaatatcttattacaaat 20968704  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||| |||||||||||    
T  20968705 gctcaagcataaaagcaagagacttccaaatactcaagcacaaaagcaagagatttcctatgct 20968768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 20567215 - 20567333
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaa 288  Q
    ||||||||||||||||  ||||| ||||||||||||||||||| | | |||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  20567215 tgtcccccttgcacttccaaggaaagttcactaaaatcaatatttgattacaattgctcaagtacaaatgcaagagacttcaaactactcaagcacaaaa 20567314  T
Q  289 gcaagaggtttcctatgct 307  Q
    |||||||||||||| ||||    
T  20567315 gcaagaggtttcctttgct 20567333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 23589123 - 23589241
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaa 288  Q
    ||||||||||||||||   |||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  23589123 tgtcccccttgcacttccgaggatagttcactaaaatcaatatctgattacaattgctcaagcaccaaagcaagagacttcaaactacttaagcacaaaa 23589222  T
Q  289 gcaagaggtttcctatgct 307  Q
    |||||||||||| ||||||    
T  23589223 gcaagaggtttcatatgct 23589241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 39799619 - 39799456
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||||   ||| || || ||||||||||||||||  ||||||||||||||||||||||||| | | ||||| |    
T  39799619 cacaaagcaattatacatgttccttccacaattcagaagtagccatgtcccccttgcacttccaaggagagttcactaaaatcaatatatgattacaaat 39799520  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | ||||||||| |||||||||||||| || |||||||||||| || |||||| |||||||||||    
T  39799519 gttcaagcacacaagcaagagacttccaaatactcaagcacacaaacaagagatttcctatgct 39799456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 2156997 - 2156885
Alignment:
Q  195 ccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaaga 294  Q
    ||||||||||  ||||||||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||    
T  2156997 ccttgcacttcaaaggagagttcactaaaatcaatatctgattacaattactcaagctcaaaagcaagagacttcaaactactcaagcacaactgcaaga 2156898  T
Q  295 ggtttcctatgct 307  Q
    |||||| ||||||    
T  2156897 ggtttcatatgct 2156885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 31589713 - 31589557
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| |||| |||||||||| |||| ||  | ||||||||||||||||  ||||||||||||||||||||||||||| | ||||| |||| |||    
T  31589713 caattatacaggttcattccacaatccggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatcaatatctgattacaaatgcttaag 31589614  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| |||||||||||||| || ||||| |||||| | |||| ||||||| ||||||    
T  31589613 cacacaagcaagagacttccaaatactccagcacacacgcaaaaggtttcatatgct 31589557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 144 - 277
Target Start/End: Original strand, 26251308 - 26251441
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| ||||||||||  ||||||||| ||||   || ||  | |||||||||  |||||  ||||||||||||||||||||||||||| | |||||||    
T  26251308 cacaaagcaattatacagattccttccaaaatccaaaagtagtcatgtccccctcacacttccaaggagagttcactaaaatcaatatctgattacaatt 26251407  T
Q  244 gctcaagcacaaaagcaagagacttcaaactact 277  Q
    |||||||||| |||||||||||||||||||||||    
T  26251408 gctcaagcaccaaagcaagagacttcaaactact 26251441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26120727 - 26120628
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||||||| ||| ||||| |||||| |||||||| ||||||||||||  | || ||||||||||||||| ||||||||||    
T  26120727 ttgtgttagctttttcttctttttaaaactaactccaacgttcagagtctgatagagttcagagtcttaaacaaagttcagagtcttattcagcggataa 26120628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 9399395 - 9399227
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    ||||||||||||||||||||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||||||    ||||||| | |||||    
T  9399395 cacaaaacaattatacaagttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaaatgtaatatctgattacaa 9399296  T
Q  242 ttgctca-agc-acaa-aagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     | |||| ||| ||||  ||||||||||||||||||||||||||||||  ||| ||| |||||||||||    
T  9399295 ctactcagagctacaactagcaagagacttcaaactactcaagcacaactgcaggagatttcctatgct 9399227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 17263334 - 17263222
Alignment:
Q  187 cttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaa 286  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||||||| | ||||| || |||| |||| ||||||||||||||||| ||||||||||||     
T  17263334 cttgtcccccttgcacttccaagaagagttcactaaaattaatatctgattacaaatgttcaaacacacaagcaagagacttcaaa-tactcaagcacac 17263236  T
Q  287 aagcaagaggtttc 300  Q
    ||||||||| ||||    
T  17263235 aagcaagagatttc 17263222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 303
Target Start/End: Original strand, 34637879 - 34637976
Alignment:
Q  207 aaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaact-actcaagcacaaaagcaagaggtttccta 303  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| ||| |||| ||||||||||||||| ||||||||||||  |||||||||||||||    
T  34637879 aaggagagttcactaaaattaatatctgattacaattgctcaaacactaaagtaagagacttcaaactaactcaagcacaactgcaagaggtttccta 34637976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 21199779 - 21199612
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa-tcaatatctaactacaat 242  Q
    |||||||||| |||||| ||||||||||||| | |||| ||  |||||||||||||||||||  ||||||||||||||||| | ||||||| | || ||     
T  21199779 cacaaaacaaatatacaggttccttccacaaaccggaagtagtcttgtcccccttgcactttcgaggagagttcactaaaatttaatatctgattataac 21199680  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | ||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  21199679 tactcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 21199612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 25097605 - 25097438
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||| ||||||  |||||||||||||||||||  ||||||| | ||||||    
T  25097605 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtccccctagcacttccaaggagagttcactaaaatgtaatatctgattacaat 25097506  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  ||||||||||||||||||||| ||||||||  ||||||| |||||||||||    
T  25097505 tgctcactgctaaaactagcaagagacttcaaactacttaagcacaattgcaagagatttcctatgct 25097438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 25155575 - 25155408
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||| ||||||  |||||||||||||||||||  ||||||| | ||||||    
T  25155575 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtccccctagcacttccaaggagagttcactaaaatgtaatatctgattacaat 25155476  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||  ||  |||  ||||||||||||||||||||| ||||||||  ||||||| |||||||||||    
T  25155475 tgctcactgctaaaactagcaagagacttcaaactacttaagcacaattgcaagagatttcctatgct 25155408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 12353574 - 12353406
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||  ||||||| | |||||    
T  12353574 cacaaagcaattatacatgttccttccacaagccggaagtcagtcatgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaa 12353475  T
Q  242 ttgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||  ||  |||  ||||||||||||||||||||||||||| ||  ||||||| |||||||||||    
T  12353474 atgctcactgctaaaactagcaagagacttcaaactactcaagcataattgcaagagatttcctatgct 12353406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 643479 - 643398
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||||||||||||||||||| |||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||    
T  643479 cacaaaacaattatacaagttccttctacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaat 643398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 7746473 - 7746306
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  ||||||||||||||||||  ||||||||||||||| |||  ||||||| | |||||     
T  7746473 cacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcacttccaaggagagttcactagaatgtaatatctgattacaac 7746374  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   |||||||||||||||| | |||||||||||  |||||||  ||||||||||    
T  7746373 tgctcactgctaaacttagcaagagacttcaaattgctcaagcacaactgcaagagtcttcctatgct 7746306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 283
Target Start/End: Original strand, 24019029 - 24019153
Alignment:
Q  158 acaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaa 257  Q
    |||||||| ||||||| || |||| ||   ||||||||||| |||||  || |||||||||||||||||||||||| | |||||||| ||||||||| ||    
T  24019029 acaagttctttccacattccggaagtagttttgtcccccttacacttccaatgagagttcactaaaatcaatatctgattacaattgttcaagcacacaa 24019128  T
Q  258 gcaagagacttcaaactactcaagca 283  Q
    | || ||| |||||| ||||||||||    
T  24019129 gtaacagatttcaaa-tactcaagca 24019153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 25770548 - 25770442
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaa----gtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcgg 96  Q
    |||||||||||||||||||||||||||| |||    || || |||||||||||||||| || ||||| ||| || || ||||||||||||||| || |||    
T  25770548 ttgtgttagctttttcttctttttaaaactaattaagttcagtgttcagtgtctgatagagctcagattcttgaacaaagttcagagtcttatccaacgg 25770449  T
Q  97 ataatgt 103  Q
    |||||||    
T  25770448 ataatgt 25770442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 306
Target Start/End: Complemental strand, 13546300 - 13546138
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||||||||||||||  ||  ||||||| | ||||||     
T  13546300 cacaaaacaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcact--aagtaatatctgattacaata 13546203  T
Q  244 gctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgc 306  Q
    |||||| ||  |||  |||||||||||||||| | |||||||||||  |||||||  |||||||||    
T  13546202 gctcaatgctaaaactagcaagagacttcaaa-tgctcaagcacaactgcaagagacttcctatgc 13546138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 23880424 - 23880591
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||| ||||| | |||  ||  ||||||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  23880424 cacaaagcaattatacaggttcctttcacaaaccggatgtagtcttgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 23880523  T
Q  243 tgctca-agc-acaa-aagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    | ||||  || ||||  |||||||||||||||| ||||||||| |||  ||||||| |||||||||||    
T  23880524 tactcactgctacaactagcaagagacttcaaattactcaagcccaactgcaagagatttcctatgct 23880591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15439528 - 15439629
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||  ||||||||||||||||||  |||||||||||||||| || |||||||||||| | ||  || || |||||||||||| |||||||| ||||    
T  15439528 ttgtgttttctttttcttctttttaaat-taagtccaatgttcagagtttgataaagttcatattcaagaacaaagttcagagtctaatgcagcgaataa 15439626  T
Q  101 tgt 103  Q
    |||    
T  15439627 tgt 15439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 21100482 - 21100314
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaa---ataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactac 239  Q
    ||||||||||||||||| ||||||||||||| | ||||   || ||  ||||||||||||| ||  || ||||||||||||||||  ||||||| | |||    
T  21100482 cacaaaacaattatacaggttccttccacaaaccggaagtcattac--tgtcccccttgcatttccaatgagagttcactaaaatgtaatatctgattac 21100385  T
Q  240 aattgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||  |||||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  21100384 aacggctcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 21100314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 22586669 - 22586563
Alignment:
Q  192 cccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagca 291  Q
    |||||||| ||||| ||||| ||||||||||||||||||||| | ||||| |||||        ||| ||||||||||||| |||||||||||| |||||    
T  22586669 cccccttgaactttcaaggaaagttcactaaaatcaatatctgattacaaatgctc--------aagtaagagacttcaaa-tactcaagcacacaagca 22586579  T
Q  292 agaggtttcctatgct 307  Q
    |||| |||||||||||    
T  22586578 agagatttcctatgct 22586563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 307
Target Start/End: Original strand, 16606917 - 16607038
Alignment:
Q  187 cttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaa-gcacaaa--agcaagagacttcaaactactcaagca 283  Q
    ||||||||||||||||||  | ||||||  ||||||||||||||||| | || |||| ||||  || ||||  ||||||||||||||||||||| |||||    
T  16606917 cttgtcccccttgcacttccatggagag--cactaaaatcaatatctgattagaattactcactgctcaaactagcaagagacttcaaactactgaagca 16607014  T
Q  284 caaaagcaagaggtttcctatgct 307  Q
     ||| ||||||| |||||||||||    
T  16607015 taaatgcaagagatttcctatgct 16607038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 295
Target Start/End: Complemental strand, 22000806 - 22000651
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||| ||||||||| |  ||| ||  ||||||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  22000806 cacaaagcaattatacaggtttcttccacaaaccagaagtagtcttgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 22000707  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    ||||||     |||   |||||||||||||||| |||||||||||||  |||||||    
T  22000706 tgctcactgctaaacttagcaagagacttcaaattactcaagcacaattgcaagag 22000651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39799720 - 39799655
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtct 67  Q
    ||||||||| |||||||||||||||||  |||||||||| ||||| |||||||| ||||||||||||    
T  39799720 ttgtgttagttttttcttctttttaaac-taagtccaatattcagagtctgatagagttcagagtct 39799655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 21659571 - 21659648
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    |||||| |||||||||  ||||||||||||| | |||| ||  || |||||||||||||||| |||||||||||||||    
T  21659571 cacaaatcaattatactggttccttccacaaaccggaagtagtctagtcccccttgcactttcaaggagagttcacta 21659648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 23413753 - 23413586
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||||| ||||||| ||||| | |||| ||  |||||||||||| |||||  |||||||||||| ||||||  ||||||| | |||||     
T  23413753 cacaaagcaattatacaggttccttacacaaaccggaagtagtcttgtccccctttcacttccaaggagagttcattaaaatgtaatatctgattacaac 23413654  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   ||||||| |||||||| ||||| |||||||  ||||||| |||||||||||    
T  23413653 tgctcactgctaaacttagcaagaaacttcaaattactcgagcacaactgcaagagatttcctatgct 23413586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 90202 - 90122
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  ||| ||||||||||||||    
T  90202 cacaaatcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaagaagagttcactaaaa 90122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 11993294 - 11993353
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca 248  Q
    ||||||||||||||||  ||||||||||||||||||  | ||||||| ||||||||||||    
T  11993294 tgtcccccttgcacttccaaggagagttcactaaaagtattatctaattacaattgctca 11993353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 20967250 - 20967300
Alignment:
Q  4 tgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataa 55  Q
    ||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  20967250 tgttagctttttcttcttttt-aaactaagtccaatgttcagagtctgataa 20967300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31589902 - 31589812
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgca 92  Q
    |||||||||||||||||||||||| ||| | ||| |||||||||| |||||||| |||||||| ||  || ||||| ||||| ||| |||||    
T  31589902 ttgtgttagctttttcttcttttt-aaactgagtacaatgttcagagtctgatagagttcagattcaagaacagagctcagattctaatgca 31589812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 12078351 - 12078420
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||| ||||||||||||||  | | |||||||||| |||||||||  ||||||||||    
T  12078351 tacaattgctcaagcacacaagcaagagacttccta-tgctcaagcacacaagcaagagacttcctatgct 12078420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 26766614 - 26766536
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaa 222  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  ||||||||||||||| ||  ||| ||||||||||||    
T  26766614 cacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcatttccaagaagagttcactaa 26766536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 26783712 - 26783793
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| |||||||| |||| | |||| ||   |||||||||||||||||  || ||||||||||||||||    
T  26783712 cacaaagcaattatacaggttccttcaacaaaccggaagtagtattgtcccccttgcacttccaaagagagttcactaaaat 26783793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 6498745 - 6498793
Alignment:
Q  259 caagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||| |||||||||||||||||| | |||||| |||||||||||    
T  6498745 caagagactccaaactactcaagcacaacaacaagagatttcctatgct 6498793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 21072898 - 21072846
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgctac 309  Q
    |||||||||||||||| |||||||||||||  ||||||  |||||||||||||    
T  21072898 agcaagagacttcaaattactcaagcacaactgcaagatatttcctatgctac 21072846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 33932637 - 33932705
Alignment:
Q  154 ttatacaagttccttccacaatctggaaat-aaccttgtcccccttgcacttttaaggagagttcacta 221  Q
    ||||||| ||||||||||||| | |||| | || ||||||||||||||||||  |||||||||||||||    
T  33932637 ttatacaggttccttccacaaaccggaagtcaatcttgtcccccttgcacttccaaggagagttcacta 33932705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 31117247 - 31117318
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  |||||||||| ||||||||    
T  31117247 ttatacaggttccttccacaaaccggaagtagtcctgtcccccttgcacttccaaggagagtttactaaaat 31117318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23588948 - 23589051
Alignment:
Q  1 ttgtgttagctttttcttctttttaa----aagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcgg 96  Q
    ||||||| |||||||||||||| |||    || |||||||| ||||||| |||||||| |||||||||| | || || | |||||||||| ||| ||| |    
T  23588948 ttgtgttggctttttcttctttataaaactaattaagtccagtgttcagagtctgatagagttcagagttttgaacaaatttcagagtctaatggagcag 23589047  T
Q  97 ataa 100  Q
    ||||    
T  23589048 ataa 23589051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 34637062 - 34637131
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||| |||||||||||| |||||| | |||||||| |||||||||||| || |||||| |||| ||||||    
T  34637062 tacaaatgctcaagcacacaagcaaaaaacttcaaa-tactcaagcacacaaacaagagatttcatatgct 34637131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 20567329 - 20567381
Alignment:
Q  242 ttgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagag 295  Q
    ||||||||||||||| ||||||||||||| | | ||||||||||||| ||||||    
T  20567329 ttgctcaagcacaaacgcaagagacttcata-tgctcaagcacaaaaccaagag 20567381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 34636906 - 34636959
Alignment:
Q  47 gtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||| || |||||||||||||||||   ||||||||||| |||||||||||||    
T  34636906 gtctggtagagttcagagtctggagctatgttcagagtctaatgcagcggataa 34636959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 191 - 307
Target Start/End: Original strand, 22427 - 22543
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    ||||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||||| |||    
T  22427 tcccccttgcactttcaaggagagttcactaaaaccaatatctgattacaattgctcaagcactaacgcaagagacttcaaactactcaagcacaatagc 22526  T
Q  291 aagaggtttcctatgct 307  Q
    |||||||||||||||||    
T  22527 aagaggtttcctatgct 22543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 58927 - 59090
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||| ||||||||||  |||| ||  | |||||| |||||| ||  ||||||||||||||||||||||||| | | |||||||    
T  58927 cacaaatcaattatacaggtttcttccacaattcggaagtagtcatgtccctcttgcatttccaaggagagttcactaaaatcaatatttgattacaatt 59026  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  59027 tctcaagcacaaaagaaaaagacttcaaactagtcaagcacaaaagcaagaggtttcctatgct 59090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 152 - 283
Target Start/End: Original strand, 86 - 217
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagc 251  Q
    ||||||||| ||||||||||||||| |||| ||  | |||||| |||||||||  ||||||||||||||||||||||||||| | |||||||||||||||    
T  86 aattatacaggttccttccacaatccggaagtagtcctgtcccacttgcacttccaaggagagttcactaaaatcaatatctgattacaattgctcaagc 185  T
Q  252 acaaaagcaagagacttcaaactactcaagca 283  Q
    |||| |||||||||||||||||||||||||||    
T  186 acaatagcaagagacttcaaactactcaagca 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 81; Significance: 4e-38; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 191 - 307
Target Start/End: Original strand, 87819 - 87935
Alignment:
Q  191 tcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagc 290  Q
    ||||||||||||||  ||||||||||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||||||||||||||||||  ||    
T  87819 tcccccttgcacttccaaggagagttcactaaaatcaatatatgattacaattgctcaagctcaaaagcaggagacttcaaactactcaagcacaactgc 87918  T
Q  291 aagaggtttcctatgct 307  Q
    |||||||||||||||||    
T  87919 aagaggtttcctatgct 87935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 219602 - 219769
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    |||||| |||||||||| ||| |||||||||   |||| ||  | ||||||||||||||||| |||||||||||||||||||  ||||||| | |||||     
T  219602 cacaaagcaattatacaggtttcttccacaaatcggaagtagtcatgtcccccttgcactttcaaggagagttcactaaaatgtaatatctgattacaaa 219701  T
Q  243 tgctcaagcacaaaa---gcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     |||||   | ||||   |||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  219702 agctcactgataaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 219769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 245029 - 244861
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||| |||||| |||||||||||    ||||||| | |||||    
T  245029 cacaaagcaattatacaggttccttccacaaaccggaagtagtcgtgtcccccttgcactttcaaggagggttcactaaaaatgtaatatctgattacaa 244930  T
Q  242 ttgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||  ||  |||  |||||||||||||||||||||||||||||   ||||||  |||||||||||    
T  244929 ctgctcactgctaaaactagcaagagacttcaaactactcaagcacagctgcaagaaatttcctatgct 244861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 378284 - 378214
Alignment:
Q  155 tatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||||||||||||| |||||| ||  | || |||||||||||||  |||||||||||||||||||    
T  378284 tatacaagttccttccacaaactggaagtagtcatgccccccttgcacttccaaggagagttcactaaaat 378214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 4110 - 3947
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||| |||||||  ||| ||  | ||||||||||||||||  ||||||||||||||||||||||||| | | ||||| |    
T  4110 cacaaagcaattatacaggttccttacacaatccagaagtagtcatgtcccccttgcacttccaaggagagttcactaaaatcaatatttgattacaaat 4011  T
Q  244 gctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||| |||||||||||||| || |||||||||||| ||||||||| |||| ||||||    
T  4010 gctcaagcacacaagcaagagacttccaaatactcaagcacataagcaagagatttcatatgct 3947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 2023 - 2189
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||| | ||||||||||||| |||||| ||  | ||||||  ||||||||  |||||||||| | |||||||||||||| | ||||| |    
T  2023 cacaaagcaattatataggttccttccacaaactggaagtagtcctgtcccatttgcacttccaaggagagtttattaaaatcaatatctgattacaaat 2122  T
Q  244 gctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||  || ||||  ||||||||||||||||| ||||||| | ||  ||||||| |||||||||||    
T  2123 gctcactgctcaaaatagcaagagacttcaaacaactcaagaaaaactgcaagagatttcctatgct 2189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 3678 - 3833
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| ||||||||||||||| |||| ||  ||| ||||||||| ||||  ||||||||||||||||||||||||||| | ||||| |||||||     
T  3678 caattatacatgttccttccacaatccggaagtagtcttctcccccttgtacttccaaggagagttcactaaaatcaatatctgattacaaatgctcaat 3777  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| ||||||||||||| ||| |||||||||||| |||||| || |||||||||||    
T  3778 cacacaagcaagagactt-aaaatactcaagcacacaagcaaaagatttcctatgct 3833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3545 - 3646
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    ||||||| | |||||||||||||||||  ||||||||| ||  || || ||||| ||||||||  ||| ||||  ||||||||||| ||||| |||||||    
T  3545 ttgtgttggttttttcttctttttaaac-taagtccaaagtctagagtatgatagagttcagatcctgaagcaacgttcagagtctaatgcaacggataa 3643  T
Q  101 tgt 103  Q
    |||    
T  3644 tgt 3646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 29158 - 29324
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||||||||||||||||||||||||| || | |||| ||  |||||| |||||||||||  | |||| ||||||||||||| |||||| | || | ||    
T  29158 cacaaaacaattatacaagttccttccataaaccggaagtagtcttgtcgcccttgcacttccatggagtgttcactaaaatccatatctgattatagtt 29257  T
Q  244 gctcaa-gcacaaaa--gcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||  || |||||  |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  29258 gctcactgctcaaaatagcaagagacttcaaactactcaagcacaattgcaagaggtttcctatgct 29324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 303
Target Start/End: Complemental strand, 20217 - 20054
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaat 242  Q
    |||||||||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  || |||||||||||||||    ||||||| | |||||     
T  20217 acaaaacaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgcacttccaaagagagttcactaaaaatgtaatatcttattacaac 20118  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttccta 303  Q
    |||||||    |||   |||||||||||||||| |||||||||||||  ||||||| |||||||    
T  20117 tgctcaacgctaaacatagcaagagacttcaaattactcaagcacaactgcaagagatttccta 20054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 9728 - 9573
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||||| ||||||||||||||| | || ||  | ||||||||||| ||||  |||||||||||||||||||||  |||| | ||||| ||||||||    
T  9728 caattatacaggttccttccacaatccgaaagtagtcctgtcccccttgtacttccaaggagagttcactaaaatcagaatctgattacaaatgctcaag 9629  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| ||| |||||||| |||| |||||||||||| ||| ||||| ||| |||||||    
T  9628 cacacaagtaagagactgcaaa-tactcaagcacagaagaaagagattttctatgct 9573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 18614 - 18726
Alignment:
Q  195 ccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaaga 294  Q
    ||||||||||| || |||||||||||||||||||||||| | ||||| ||||||||| ||| |||||||||||||||||||  |||||||||   |||||    
T  18614 ccttgcactttcaaagagagttcactaaaatcaatatcttattacaaatgctcaagcgcaatagcaagagacttcaaactatgcaagcacaactacaaga 18713  T
Q  295 ggtttcctatgct 307  Q
    | |||||||||||    
T  18714 gatttcctatgct 18726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 76615 - 76774
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctca-a 249  Q
    ||||| |||| ||||||||||||| | |||| ||  | ||||||||||||||||  || |||||||||||||||||||||||| | ||||| ||||||      
T  76615 caattctacaggttccttccacaaaccggaagtagtcctgtcccccttgcacttccaaagagagttcactaaaatcaatatctgattacaactgctcact 76714  T
Q  250 gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||  |||  ||||||||||||||||||||||||| |||||| ||||||  ||||||||||    
T  76715 gctaaaactagcaagagacttcaaactactcaagaacaaaatcaagagacttcctatgct 76774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 87126 - 87225
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||||||||||||||||||||||| |||||||| ||||||   | ||||| |||| ||||||| || || | ||||||||||||||||||||||||    
T  87126 ttgtgttagctttttcttctttttaaaactaagtccagtgttcaaattatgatagagtttagagtcttgaacaaacttcagagtcttatgcagcggataa 87225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 111776 - 111931
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaattgctcaag 250  Q
    |||||||| | ||||||||||||||| | || ||  | |||| |||||| ||||  |||||||||||||||||||||  |||| | ||||| ||||||||    
T  111776 caattatataggttccttccacaatccgaaagtagtcctgtctcccttgtacttccaaggagagttcactaaaatcagaatctgattacaaatgctcaag 111875  T
Q  251 cacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||| ||| ||||||||||||| |||||||||| | ||||||||| ||| |||||||    
T  111876 cacacaagtaagagacttcaaa-tactcaagcatacaagcaagagattttctatgct 111931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 144286 - 144436
Alignment:
Q  162 gttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcact-aaaatc-aatatctaactacaattgctca-agcacaaa-- 256  Q
    ||||||||||||||| |||| ||  | |||||||||||||||| ||||||||||||||| |||||| |||||||   ||||||||||||  ||  |||      
T  144286 gttccttccacaatccggaagtagtcatgtcccccttgcacttctaaggagagttcactaaaaatcaaatatctgtttacaattgctcactgctaaaact 144385  T
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  144386 agcaagagacttcaaattactcaagcacaaatgcaagagatttcctatgct 144436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 31134 - 31240
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||||||||| |||| |||||||||| ||||||||| ||   ||||||||||| |||||| || |||||||||||||||||||||||| | ||||| |    
T  31134 cacaaaacaattgtacatgttccttccataatctggaagtagtgttgtccccctttcactttcaaagagagttcactaaaatcaatatctgattacaaat 31233  T
Q  244 gctcaag 250  Q
    |||||||    
T  31234 gctcaag 31240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 4655 - 4561
Alignment:
Q  213 agttcactaaaatcaatatctaactacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||| || |||| | ||||| |||||||||||| |||||||||||||| || |||||||||||| ||||||||| |||||||||||    
T  4655 agttcactaaaattaacatctgattacaaatgctcaagcacacaagcaagagacttccaaatactcaagcacacaagcaagagatttcctatgct 4561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 2808 - 2641
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaa--tcaatatctaactacaa 241  Q
    |||||| |||||||||||||||||||||||||| |||| ||  | |||||||||| |||||  ||||||||||||||||||    ||||||| | |||||    
T  2808 cacaaagcaattatacaagttccttccacaatccggaagtagtcatgtccccctttcacttccaaggagagttcactaaaaatgtaatatcttattacaa 2709  T
Q  242 ttgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||  ||  |||  |||||||||||| |||||||||||||||||  ||||||| |||| ||||||    
T  2708 ctgctcactgctaaaactagcaagagactt-aaactactcaagcacaactgcaagagatttcatatgct 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7005 - 6911
Alignment:
Q  1 ttgtgttagctttttcttc--ttttta-aaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgca 92  Q
    |||||||||||||||||||  |||||| ||| |||||||||||||||| |||||||| |||||||| ||  || || | |||||||||| |||||    
T  7005 ttgtgttagctttttcttccttttttataaactaagtccaatgttcagagtctgatagagttcagattcaagaacaaatttcagagtctaatgca 6911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 6877 - 6812
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagtt 216  Q
    |||||||||| ||||||| ||||||| |||| ||  | ||||||||||||||||  ||||||||||    
T  6877 caattatacaggttcctttcacaatccggaagtagtcctgtcccccttgcacttccaaggagagtt 6812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1281 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1281
Description:

Target: scaffold1281; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 2133 - 1966
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    |||||| |||||||||| ||| ||||||||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||  ||||||| | |||||     
T  2133 cacaaagcaattatacatgtttcttccacaaaccggaagtagtcctgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaac 2034  T
Q  243 tgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||| ||  ||  |||  ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  2033 tgcgcactgctaaaactagcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 1966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 14480 - 14646
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  ||||||||||||||||||  ||||| |||||||||||||  | |||| | ||||| |    
T  14480 cacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgcacttccaaggaaagttcactaaaatgtaaatctgattacaact 14579  T
Q  244 gctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||     |||   |||||||||||||||| |||||||||||||  ||||||| |||||||||||    
T  14580 gctcactgctaaacttagcaagagacttcaaattactcaagcacaactgcaagagatttcctatgct 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 268145 - 268311
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt 243  Q
    ||||||||||||||||| ||||||||||||| | |||| ||  | | | ||||||||||||  ||||||||||||||||||||||||| | | ||||| |    
T  268145 cacaaaacaattatacaggttccttccacaaaccggaagtagtcctattccccttgcacttccaaggagagttcactaaaatcaatatttgattacaact 268244  T
Q  244 gctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||  || ||||  ||||||| ||||||||||||||||||||||  | ||||  |||||||||||    
T  268245 tctcactgctcaaaatagcaagacacttcaaactactcaagcacaattgtaagatatttcctatgct 268311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 32534 - 32370
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaat 242  Q
    |||||| |||||||| | ||||||||||||| | |||| ||  ||||||||||||||| ||  |||||||||||||||||||  ||||||| | |||||     
T  32534 cacaaagcaattatataggttccttccacaaaccggaagtagtcttgtcccccttgcatttccaaggagagttcactaaaatgtaatatctgattacaac 32435  T
Q  243 tgctca-agcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctat 304  Q
    ||||||  ||  |||  || |||||||||||||||||||||||||||  ||||||| ||||||||    
T  32434 tgctcactgctaaaactagaaagagacttcaaactactcaagcacaactgcaagagatttcctat 32370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 2593 - 2761
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaat-ctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaa 241  Q
    |||||| |||||||| | |||||||||||||  | |||| ||  ||||||||||||||||||  |||||||||||||||||||  ||||||| | |||||    
T  2593 cacaaagcaattatataggttccttccacaaaaccggaagtagtcttgtcccccttgcacttacaaggagagttcactaaaatgtaatatctgattacaa 2692  T
Q  242 ttgctcaagcacaaaa---gcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||     ||||   ||||||||||||||||||||||| |||||  ||||||| |||||||||||    
T  2693 ctgctcactactaaaactggcaagagacttcaaactactcaaacacaactgcaagagatttcctatgct 2761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 307
Target Start/End: Complemental strand, 16873 - 16710
Alignment:
Q  148 aaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaattgct 246  Q
    ||||||||||||| ||||||||||||| | |||| ||  |  |||||||||||||||  |||||||||||||||||||  ||||||| | || || ||||    
T  16873 aaacaattatacaggttccttccacaaaccggaagtagtcacgtcccccttgcacttccaaggagagttcactaaaatgtaatatctgattataactgct 16774  T
Q  247 caagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||     |||   ||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  16773 cacttctaaaactagcaagagacttcaaactactcaagcacaactacaagagatttcctatgct 16710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 73944 - 74112
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaa 241  Q
    |||||| |||||||| | ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||  ||||| | | |||||    
T  73944 cacaaagcaattatataggttccttccacaaaccggaagtcagtcctgtcccccttgcacttccaaggagagttcactaaaatttaatatttgattacaa 74043  T
Q  242 ttgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||     |||   ||||||||||||||||||||||||||||||  ||||||| |||| ||||||    
T  74044 ttgctcactgttaaacttagcaagagacttcaaactactcaagcacaactgcaagagatttcttatgct 74112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 9268 - 9349
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||||||||||||||  |||||||||||||||||||    
T  9268 cacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgcacttccaaggagagttcactaaaat 9349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 28176 - 28070
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat-caatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||  ||||||||| |||||    
T  28176 cacaaagcaattatacaggttccttccacaaaccggaagtcagtcctgtcccccttgcacttccaaggagagttcactaaaatgtaatatctaattacaa 28077  T
Q  242 ttgctca 248  Q
     ||||||    
T  28076 ctgctca 28070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 8114 - 8164
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  8114 agcaagagacttcaaactactcaagcacaactgcaagagatttcctatgct 8164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 211718 - 211800
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||||||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||    
T  211718 cacaaagcaattatacaagttccttccacaaaccggaagtcattcctgtcccccttgcacttccaaggagagttcactaaaat 211800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 1205 - 1371
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcact-aaaatcaatatctaactacaat 242  Q
    |||||| |||||||||||||||||||||||| | |||| ||  | | | ||||||||||||  |||||||||||||| ||||  ||||||| | ||||||    
T  1205 cacaaagcaattatacaagttccttccacaaaccggaagtagtcatat-ccccttgcacttccaaggagagttcactaaaaagtaatatctgattacaat 1303  T
Q  243 tgctcaagcacaaa---agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||     |||   |||||||||||| ||| |||||||||| ||  ||||||| |||||||||||    
T  1304 tgctcactactaaaactagcaagagactttaaaatactcaagcataactgcaagagatttcctatgct 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 801 - 849
Alignment:
Q  259 caagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  801 caagagacttcaaactactcaagcacacaagcaagagtttccctatgct 849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 610 - 562
Alignment:
Q  259 caagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  610 caagagacttcaaactactcaagcacacaagcaagagtttccctatgct 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4132 - 4034
Alignment:
Q  1 ttgtgttagctttttcttctttttaaaagtaagtccaatgttcagtgtctgataaagttcagagtctggagcagagttcagagtcttatgcagcggataa 100  Q
    |||||||  ||||||||||||||||||  ||||| ||| |||||  |||||||| |||||| | || ||||||  ||||||||||| |||||||||||||    
T  4132 ttgtgttgactttttcttctttttaaac-taagttcaaggttcaaagtctgatagagttcaaattcaggagcaatgttcagagtctaatgcagcggataa 4034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 3915 - 3862
Alignment:
Q  237 tacaattgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagca 291  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  3915 tacaaatgctcaagcacaaaagcaagagacttcaaa-tactcaagtacacaagca 3862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 900 - 854
Alignment:
Q  261 agagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||| ||||||||  ||||||| |||||||||||    
T  900 agagacttcaaactactaaagcacaactgcaagagatttcctatgct 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 9369 - 9487
Alignment:
Q  193 ccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaattgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaa 288  Q
    ||||||||||||  |||||||||||||||||||  ||||||| | ||||| ||||||  ||  |||  ||||||||||||||||||| ||||||||||      
T  9369 ccccttgcacttccaaggagagttcactaaaatgtaatatctgattacaactgctcactgctaaaactagcaagagacttcaaactattcaagcacaact 9468  T
Q  289 gcaagaggtttcctatgct 307  Q
    ||||||| ||| |||||||    
T  9469 gcaagagattttctatgct 9487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 8067 - 8185
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaattgctcaa-gcacaaa--agcaagagacttcaaactactcaagcac 284  Q
    ||||||||||||||||  |||||||||||| ||||||  ||||||| | ||||| ||||||  ||  |||  ||||||||||||||||||| ||||||||    
T  8067 tgtcccccttgcacttccaaggagagttcagtaaaatgtaatatctgattacaactgctcactgctaaaactagcaagagacttcaaactattcaagcac 8166  T
Q  285 aaaagcaagaggtttccta 303  Q
    ||  ||||||| |||||||    
T  8167 aactgcaagagatttccta 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 246
Target Start/End: Complemental strand, 37494 - 37391
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc-aatatctaactacaat 242  Q
    |||||| |||||||||| |||||||||||||   |||| ||  | |||||||||||| |||  |||||||||| ||||||||| ||||||| | ||||||    
T  37494 cacaaagcaattatacaggttccttccacaaatcggaagtagtcctgtcccccttgctcttccaaggagagtttactaaaatctaatatctgattacaat 37395  T
Q  243 tgct 246  Q
    ||||    
T  37394 tgct 37391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 44489 - 44442
Alignment:
Q  260 aagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||    
T  44489 aagagacttcaaactactcaagcacaactgcaagagatttcctatgct 44442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 80758 - 80926
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatc--aatatctaactacaa 241  Q
    |||||| |||||||||| ||||||||||||| | |||| ||  | ||||| | ||| ||||  ||||||||||||||||||    ||||||||  |||||    
T  80758 cacaaatcaattatacaggttccttccacaaaccggaagtagtcctgtcctcattgtacttccaaggagagttcactaaaaatgtaatatctacttacaa 80857  T
Q  242 ttgctcaagcacaaaa---gcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
     ||||||  |  ||||   |||||||||||||||||||||||||||||   |||||  |||||||||||    
T  80858 ctgctcactcctaaaactggcaagagacttcaaactactcaagcacaactacaagacatttcctatgct 80926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 2424 - 2374
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||||||||||||| ||||||||  ||||||| |||||||||||    
T  2424 agcaagagacttcaaactacttaagcacaactgcaagagatttcctatgct 2374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 2522 - 2448
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||| ||||||||||||||  |||| ||  | ||||| ||||||||||  |||||||||||||||||||    
T  2522 caattatacaggttccttccacaattcggaagtagtcctgtcctccttgcacttccaaggagagttcactaaaat 2448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 31948 - 32030
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||    
T  31948 cacaaagcaattatacaggttccttccacaaaccggaagtcagtcctgtcccccttgcacttccaaggagagttcactaaaat 32030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 48695 - 48776
Alignment:
Q  145 acaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    ||||| |||||||||| ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||    
T  48695 acaaagcaattatacaggttccttccacaaaccggaagtcagtcatgtcccccttgcacttccaaggagagttcactaaaat 48776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 59449 - 59523
Alignment:
Q  151 caattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||||||| ||||||||||||| | |||| ||  | ||| ||||||||||||  |||||||||||||||||||    
T  59449 caattatacaggttccttccacaaaccggaagtagtcatgtaccccttgcacttccaaggagagttcactaaaat 59523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 102932 - 103013
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaa 224  Q
    |||||| |||||||| ||||||||||||||| | |||| | |  ||||||||||||||||||  ||||| ||||||||||||    
T  102932 cacaaagcaattatataagttccttccacaaaccggaagtcagtcttgtcccccttgcacttccaaggatagttcactaaaa 103013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 158536 - 158640
Alignment:
Q  207 aaggagagttcactaaaatc-aatatctaactacaattgctcaa-gcacaaa--agcaagagacttcaaactactcaagcacaaaagcaagaggtttcct 302  Q
    |||||||||||||||||||  ||||||| | ||||||||||||  ||  |||  |||||||||||||||||| |||| ||||||  ||||||| ||||||    
T  158536 aaggagagttcactaaaatgtaatatctgattacaattgctcactgctaaaactagcaagagacttcaaactgctcatgcacaactgcaagagatttcct 158635  T
Q  303 atgct 307  Q
    |||||    
T  158636 atgct 158640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 248
Target Start/End: Complemental strand, 7480 - 7384
Alignment:
Q  154 ttatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcact-aaaatcaatatctaactacaattgctca 248  Q
    ||||||| ||||||||||||| | |||| | |  ||||||||||||||||||  |||||||||||||| ||||  ||||||| | ||||||||||||    
T  7480 ttatacaggttccttccacaaaccggaagtcagtcttgtcccccttgcacttccaaggagagttcactaaaaagtaatatctgattacaattgctca 7384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 63747 - 63807
Alignment:
Q  189 tgtcccccttgcacttttaaggagagttcact-aaaatcaatatctaactacaattgctca 248  Q
    ||||||||||||||||| |||||||||||||| ||||  ||||||| | ||||||||||||    
T  63747 tgtcccccttgcactttgaaggagagttcactaaaaaataatatctgattacaattgctca 63807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 9326 - 9408
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||| | ||||||||||||| | |||| | |  | ||||||||||||||||  |||||||||||||||||||    
T  9326 cacaaagcaattatataggttccttccacaaaccggaagtcagtcctgtcccccttgcacttacaaggagagttcactaaaat 9408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 7308 - 7354
Alignment:
Q  261 agagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||| |||||||||||||  ||||||| |||||||||||    
T  7308 agagacttcaaattactcaagcacaactgcaagagttttcctatgct 7354  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 1021 - 1103
Alignment:
Q  144 cacaaaacaattatacaagttccttccacaatctggaaataac-cttgtcccccttgcacttttaaggagagttcactaaaat 225  Q
    |||||| |||||||||| |||||||||  || |||||| | |  | ||||||||||||||||| || ||||||||||||||||    
T  1021 cacaaagcaattatacaggttccttccttaaactggaagtcagtcatgtcccccttgcactttcaatgagagttcactaaaat 1103  T

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Target: scaffold0081 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 13523 - 13573
Alignment:
Q  257 agcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||||| |||| |||||||||||||  ||||||| |||||||||||    
T  13523 agcaagagactacaaattactcaagcacaactgcaagagatttcctatgct 13573  T

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Target: scaffold0043 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 283
Target Start/End: Complemental strand, 2502 - 2370
Alignment:
Q  152 aattatacaagttccttccacaatctggaaataaccttgtcccccttgcacttttaaggagagttcactaaaatcaatatctaactacaatt--gctcaa 249  Q
    ||||||||| ||||||||||||||| |||| ||  | | ||| ||||||||||  || ||||||||||||||| ||  || | | ||||| |  ||||||    
T  2502 aattatacaggttccttccacaatccggaagtagacctatcctccttgcacttccaatgagagttcactaaaaccagaatatgattacaaatgcgctcaa 2403  T
Q  250 gcacaaaagcaagagacttcaaactactcaagca 283  Q
    ||||| ||| ||||||| ||||| ||||||||||    
T  2402 gcacacaagaaagagacatcaaa-tactcaagca 2370  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 7067 - 7003
Alignment:
Q  242 ttgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    |||||||||||| |||||||||||||||  | | ||||||||| ||||||||||  ||||||||||    
T  7067 ttgctcaagcactaaagcaagagacttccta-tgctcaagcactaaagcaagagacttcctatgct 7003  T

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Target: scaffold0092 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 7591 - 7654
Alignment:
Q  243 tgctcaagcacaaaagcaagagacttcaaactactcaagcacaaaagcaagaggtttcctatgct 307  Q
    ||||||||| || |||||||| |||||||| |||||||| ||| ||||||||  |||||||||||    
T  7591 tgctcaagcgcacaagcaagatacttcaaa-tactcaagtacacaagcaagaaatttcctatgct 7654  T

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