View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9564_low_31 (Length: 233)
Name: NF9564_low_31
Description: NF9564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9564_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 16343676 - 16343875
Alignment:
| Q |
13 |
agcagagagtcagttgcaatccacaagttattccagtttctttgatgagcacacttaatagccaaaataacaccaaagatcgatctcagcataaacagaa |
112 |
Q |
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| T |
16343676 |
agcatagagtcagttgcaatccacaagttattccagtttctttgatgagcacactcaatagccaaaataacaccaaagatc----tcagcataaacagaa |
16343771 |
T |
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| Q |
113 |
ttggcaagccctgtgttataagcgaaatagccaagacttatcccactgcaatttttaaagattcctccacaagctgctaaaccagaagaacctaaggctg |
212 |
Q |
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| T |
16343772 |
ttggcaagccctgtgttataagcgaaatagccaagactttccccactgcaatttttaaagattcctccacaagctgctaaaccagaagaacctaaggttg |
16343871 |
T |
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