View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9564_low_40 (Length: 206)
Name: NF9564_low_40
Description: NF9564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9564_low_40 |
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Alignment Details
Target: chr5 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 15850081 - 15850263
Alignment:
| Q |
14 |
ttattctctcccacttcattagcagaaatttccagctccacgactttatctctcagtcttttctggtaaggagnnnnnnnnntcagttttacaaagctaa |
113 |
Q |
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| T |
15850081 |
ttattttctcccacttgattagcagaactttccgactccacaatttcatctatcagtctattctggtaaggagaaaaaaaaatcagttttacaaagctaa |
15850180 |
T |
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| Q |
114 |
atacaaaaagcataaacaatttttgcaagtataacatcggctaaagttagtaacaaatattcatcgcagatgtttggagtgat |
196 |
Q |
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| T |
15850181 |
gtaccaaaagcataaacaatttttgcaagtataatatcagctaaagttagtaacaaacattcatcgcagatatttggagtgat |
15850263 |
T |
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