View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9566_low_15 (Length: 247)
Name: NF9566_low_15
Description: NF9566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9566_low_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 11381354 - 11381590
Alignment:
| Q |
11 |
caaaggagatgtggcctctactctaaagttttccaaactgcaatccctgatttgattaattgatacttacatcagtacaaaagatactataaccaagtgc |
110 |
Q |
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| T |
11381354 |
caaaggagatgtggcctctactctaaagttttccaaactgcaatccctgatttgattaattgatacttacatcagtacaaaagatactataaccaagtgc |
11381453 |
T |
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| Q |
111 |
aatgacactactaatgcaaaatgatatgtaaatcatacaacgtctaagataaatcaagaaacaaactttatgaaattacaagaattagatgtattttaag |
210 |
Q |
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| T |
11381454 |
aatgacactactaatgcaaaatgatatgtaaatcatacaacgtctaagataaatcaagaaacaaactttatgaaattacaagaattagatgtattttaag |
11381553 |
T |
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| Q |
211 |
ctctgtagcagcaataattctgatcgaaagtatgtcc |
247 |
Q |
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| T |
11381554 |
ctctgtagcagcaataattctgatcgaaagtatgtcc |
11381590 |
T |
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