View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9570_low_21 (Length: 234)
Name: NF9570_low_21
Description: NF9570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9570_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 29336096 - 29335891
Alignment:
| Q |
12 |
cataggtatgaaaccttgctcacaaaagtcaagaatttaattaatttcatatagcaccaactaacatcttgtctctaaatcaaataccaagggtaaatga |
111 |
Q |
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| T |
29336096 |
cataggtatgaaaccttgctcacaaaagtcaagaatttaattaatttcatatagcaccaactaacatcttgtctctaaatcaaataccaagggtaaatgg |
29335997 |
T |
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| Q |
112 |
actttattttcagaaaaataaattaaataaaatatttggccattttctttcaggtgttaaatgaatattaagagaggctataggattttatttaatagat |
211 |
Q |
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| T |
29335996 |
actttattttcagaaaaataaactaaataaaatatttggccattttctttcaggtgttaaatgaatattaagagaggctatatgattttatttaatagat |
29335897 |
T |
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| Q |
212 |
ctatat |
217 |
Q |
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|||||| |
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| T |
29335896 |
ctatat |
29335891 |
T |
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