View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9572_high_3 (Length: 281)
Name: NF9572_high_3
Description: NF9572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9572_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 5895137 - 5894872
Alignment:
| Q |
1 |
agcgagtatttgattgatcagttttggaagttagtttatgatatgaggagtgctggattcaagataggagaaaatacctatctttcctttcatgaaagct |
100 |
Q |
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| T |
5895137 |
agcgagtatttgattgatcagttttggaagttagtttatgatatgaggagtgctggattcaagataggagaaaatacctatctttcctttcatgaaagct |
5895038 |
T |
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| Q |
101 |
ttattttgaagaaaatgcttaaggatgctgttaagctttatgagtttgttatgactggtcctaacaa-agcctaggttgtagacaattattgagtagtat |
199 |
Q |
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| T |
5895037 |
ttattttgaagaaaatgcttaaggatgctgtgaagctttatgagtttgttatggctggtcctaacaagaacctaggttgtagaaatctattgagtagtat |
5894938 |
T |
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| Q |
200 |
tgtttcttttgacgagctcgatatggatttgttttcaagggctgtgaaggtttttaccgaaaatgg |
265 |
Q |
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| T |
5894937 |
tgtttcttttgacgagctcgatatggatttgttttcaagggctgtgaaggtttttaccaaaaatgg |
5894872 |
T |
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