View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9573_high_10 (Length: 336)

Name: NF9573_high_10
Description: NF9573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9573_high_10
NF9573_high_10
[»] chr8 (37 HSPs)
chr8 (7-318)||(11383384-11383709)
chr8 (7-173)||(22975914-22976080)
chr8 (90-318)||(40221227-40221468)
chr8 (56-173)||(15212432-15212550)
chr8 (187-318)||(22976126-22976257)
chr8 (190-318)||(42435436-42435564)
chr8 (216-318)||(44353416-44353518)
chr8 (182-318)||(4283133-4283269)
chr8 (72-173)||(30143005-30143106)
chr8 (79-173)||(12703043-12703137)
chr8 (86-173)||(4731335-4731422)
chr8 (86-160)||(4733502-4733576)
chr8 (86-172)||(27810975-27811061)
chr8 (80-173)||(34256908-34257002)
chr8 (72-173)||(42435613-42435714)
chr8 (80-173)||(1746622-1746716)
chr8 (72-173)||(43036086-43036187)
chr8 (234-321)||(20686498-20686586)
chr8 (207-318)||(2999965-3000078)
chr8 (28-120)||(33351789-33351882)
chr8 (86-173)||(1345775-1345861)
chr8 (79-173)||(42497884-42497979)
chr8 (80-173)||(34254732-34254826)
chr8 (29-172)||(4456446-4456590)
chr8 (81-173)||(31217928-31218021)
chr8 (59-134)||(5702024-5702100)
chr8 (87-173)||(4743597-4743684)
chr8 (56-134)||(19175275-19175353)
chr8 (120-173)||(4283039-4283092)
chr8 (72-173)||(10014822-10014923)
chr8 (81-173)||(19945743-19945836)
chr8 (207-319)||(40585336-40585449)
chr8 (187-289)||(10239679-10239782)
chr8 (7-41)||(44353284-44353318)
chr8 (96-132)||(2627428-2627464)
chr8 (257-312)||(3817784-3817840)
chr8 (96-132)||(7289631-7289667)
[»] scaffold0014 (2 HSPs)
scaffold0014 (7-173)||(80905-81071)
scaffold0014 (182-318)||(80728-80864)
[»] chr3 (64 HSPs)
chr3 (7-173)||(55302587-55302752)
chr3 (72-318)||(49199916-49200174)
chr3 (182-318)||(55302410-55302546)
chr3 (7-173)||(4569331-4569497)
chr3 (86-318)||(34490691-34490936)
chr3 (25-318)||(36018259-36018574)
chr3 (187-318)||(40912929-40913061)
chr3 (204-318)||(28074226-28074340)
chr3 (28-173)||(29812681-29812827)
chr3 (182-318)||(43404178-43404314)
chr3 (187-318)||(54593296-54593428)
chr3 (179-318)||(4569535-4569674)
chr3 (28-173)||(31340664-31340810)
chr3 (216-318)||(30235745-30235848)
chr3 (56-194)||(51398472-51398611)
chr3 (53-173)||(54593130-54593250)
chr3 (80-173)||(43404355-43404448)
chr3 (190-302)||(31340502-31340614)
chr3 (190-318)||(43402235-43402363)
chr3 (67-173)||(6096222-6096328)
chr3 (60-173)||(29810518-29810632)
chr3 (29-173)||(21711638-21711783)
chr3 (216-318)||(47303872-47303975)
chr3 (80-173)||(5236861-5236954)
chr3 (56-173)||(46173163-46173279)
chr3 (187-318)||(6096044-6096176)
chr3 (80-168)||(43402417-43402505)
chr3 (82-173)||(40592340-40592431)
chr3 (88-173)||(44331248-44331333)
chr3 (208-318)||(41819966-41820078)
chr3 (80-173)||(7761935-7762028)
chr3 (80-173)||(7764122-7764216)
chr3 (207-316)||(35139160-35139270)
chr3 (81-173)||(5258548-5258641)
chr3 (232-317)||(5434324-5434410)
chr3 (80-173)||(9636532-9636626)
chr3 (56-134)||(27027183-27027261)
chr3 (90-172)||(40912800-40912882)
chr3 (80-173)||(45094834-45094928)
chr3 (56-172)||(8127068-8127185)
chr3 (234-318)||(26323957-26324042)
chr3 (29-134)||(27038518-27038623)
chr3 (29-134)||(35925967-35926072)
chr3 (29-173)||(36029530-36029674)
chr3 (69-134)||(40734156-40734221)
chr3 (69-134)||(40735087-40735152)
chr3 (56-134)||(1735837-1735914)
chr3 (95-173)||(3393292-3393370)
chr3 (71-134)||(8370036-8370099)
chr3 (72-134)||(16264825-16264887)
chr3 (29-134)||(39032060-39032165)
chr3 (29-134)||(30709301-30709405)
chr3 (182-318)||(34795456-34795593)
chr3 (247-318)||(46860122-46860194)
chr3 (91-142)||(16498748-16498799)
chr3 (67-134)||(47923445-47923512)
chr3 (29-173)||(40845090-40845236)
chr3 (29-172)||(33386180-33386324)
chr3 (86-139)||(44331885-44331938)
chr3 (82-134)||(48438692-48438744)
chr3 (227-321)||(39127191-39127286)
chr3 (29-63)||(54634752-54634786)
chr3 (207-260)||(20937355-20937408)
chr3 (94-133)||(37726058-37726095)
[»] chr4 (64 HSPs)
chr4 (86-316)||(46569993-46570235)
chr4 (67-318)||(54882480-54882743)
chr4 (96-318)||(55085811-55086032)
chr4 (182-318)||(26363852-26363988)
chr4 (182-318)||(27417396-27417532)
chr4 (182-318)||(40630571-40630707)
chr4 (95-318)||(2209188-2209431)
chr4 (56-169)||(26363694-26363807)
chr4 (182-318)||(6655543-6655679)
chr4 (56-171)||(9927867-9927982)
chr4 (191-318)||(50674291-50674418)
chr4 (216-318)||(8653220-8653323)
chr4 (216-318)||(8665027-8665130)
chr4 (216-318)||(10071505-10071608)
chr4 (28-173)||(12745820-12745965)
chr4 (80-194)||(35661892-35662006)
chr4 (80-192)||(56179009-56179122)
chr4 (86-194)||(26176007-26176115)
chr4 (182-318)||(50263143-50263279)
chr4 (79-173)||(52095764-52095859)
chr4 (82-193)||(5370459-5370571)
chr4 (97-173)||(34570818-34570894)
chr4 (28-196)||(12739919-12740087)
chr4 (28-196)||(12748125-12748293)
chr4 (208-318)||(46703114-46703224)
chr4 (72-173)||(6655401-6655502)
chr4 (29-173)||(36314746-36314890)
chr4 (29-173)||(36328955-36329099)
chr4 (86-173)||(5429357-5429444)
chr4 (247-318)||(12073045-12073116)
chr4 (207-309)||(22883206-22883309)
chr4 (207-309)||(22934870-22934973)
chr4 (208-318)||(41964029-41964140)
chr4 (29-173)||(25861548-25861693)
chr4 (29-134)||(16628388-16628492)
chr4 (95-173)||(37740312-37740390)
chr4 (187-245)||(41639157-41639215)
chr4 (90-173)||(41639028-41639111)
chr4 (56-134)||(3778025-3778103)
chr4 (82-194)||(10047780-10047893)
chr4 (234-318)||(33989501-33989586)
chr4 (227-318)||(35370782-35370874)
chr4 (90-173)||(27417573-27417656)
chr4 (244-318)||(35662091-35662165)
chr4 (82-134)||(5268768-5268820)
chr4 (90-173)||(40630447-40630530)
chr4 (90-173)||(50674468-50674551)
chr4 (82-173)||(54867616-54867707)
chr4 (96-173)||(8689079-8689157)
chr4 (227-318)||(35369884-35369971)
chr4 (247-318)||(379030-379102)
chr4 (207-287)||(3785702-3785782)
chr4 (82-173)||(6742984-6743075)
chr4 (252-318)||(38811523-38811590)
chr4 (80-142)||(36994231-36994293)
chr4 (29-134)||(16622809-16622913)
chr4 (120-173)||(54200310-54200363)
chr4 (232-319)||(26699891-26699979)
chr4 (150-194)||(48142794-48142838)
chr4 (109-173)||(50263319-50263383)
chr4 (69-134)||(5396245-5396311)
chr4 (96-134)||(13992731-13992769)
chr4 (62-134)||(38151985-38152057)
chr4 (96-132)||(56141715-56141751)
[»] chr7 (52 HSPs)
chr7 (52-318)||(2389717-2390005)
chr7 (96-318)||(2361416-2361639)
chr7 (187-318)||(32358281-32358412)
chr7 (28-173)||(14070237-14070383)
chr7 (28-173)||(14380265-14380411)
chr7 (56-173)||(47676540-47676658)
chr7 (187-318)||(6360357-6360488)
chr7 (56-173)||(47674347-47674465)
chr7 (86-318)||(29608211-29608464)
chr7 (191-318)||(48599769-48599896)
chr7 (216-318)||(6431592-6431694)
chr7 (216-318)||(4512834-4512936)
chr7 (227-318)||(30814397-30814488)
chr7 (216-318)||(4509142-4509244)
chr7 (216-318)||(4510984-4511086)
chr7 (56-173)||(27347570-27347687)
chr7 (204-318)||(22269583-22269698)
chr7 (56-161)||(32358470-32358575)
chr7 (80-173)||(23554710-23554804)
chr7 (208-318)||(3258608-3258719)
chr7 (51-173)||(4585803-4585925)
chr7 (216-318)||(34311161-34311264)
chr7 (96-173)||(4538955-4539032)
chr7 (59-173)||(18126294-18126408)
chr7 (80-173)||(19495640-19495735)
chr7 (7-70)||(30814249-30814312)
chr7 (107-194)||(31733333-31733420)
chr7 (232-320)||(22328842-22328931)
chr7 (80-173)||(43863932-43864025)
chr7 (86-172)||(6360535-6360621)
chr7 (56-173)||(33331992-33332110)
chr7 (49-135)||(49092167-49092252)
chr7 (81-173)||(4178446-4178539)
chr7 (28-112)||(34311285-34311369)
chr7 (82-173)||(2647266-2647357)
chr7 (86-173)||(4796242-4796329)
chr7 (86-169)||(48489107-48489190)
chr7 (33-173)||(2479772-2479913)
chr7 (120-173)||(2761706-2761759)
chr7 (80-173)||(26416984-26417077)
chr7 (94-173)||(30026404-30026482)
chr7 (86-141)||(48599932-48599987)
chr7 (251-316)||(5116290-5116356)
chr7 (18-75)||(4509323-4509380)
chr7 (18-75)||(4511165-4511222)
chr7 (18-75)||(6431456-6431513)
chr7 (96-134)||(25767398-25767436)
chr7 (29-63)||(31109112-31109146)
chr7 (82-120)||(35961457-35961495)
chr7 (62-134)||(79867-79938)
chr7 (96-132)||(12397266-12397302)
chr7 (96-132)||(12406618-12406654)
[»] chr1 (47 HSPs)
chr1 (86-318)||(11348178-11348421)
chr1 (166-317)||(29135819-29135970)
chr1 (86-318)||(37879356-37879600)
chr1 (203-318)||(47255779-47255894)
chr1 (182-316)||(193199-193333)
chr1 (216-318)||(19754112-19754214)
chr1 (179-318)||(19752270-19752409)
chr1 (208-318)||(34602784-34602894)
chr1 (208-318)||(34603189-34603299)
chr1 (187-318)||(13547534-13547665)
chr1 (187-318)||(13549445-13549576)
chr1 (182-318)||(37033518-37033650)
chr1 (208-318)||(7482676-7482786)
chr1 (220-318)||(42298420-42298518)
chr1 (67-173)||(193052-193158)
chr1 (59-139)||(28220665-28220746)
chr1 (80-173)||(44454830-44454923)
chr1 (79-171)||(3189020-3189113)
chr1 (79-171)||(3197837-3197930)
chr1 (79-171)||(3206655-3206748)
chr1 (81-173)||(20762343-20762436)
chr1 (59-139)||(28223860-28223941)
chr1 (232-311)||(6808083-6808163)
chr1 (207-318)||(41135432-41135544)
chr1 (216-286)||(31928277-31928348)
chr1 (96-173)||(3156554-3156631)
chr1 (72-173)||(37033691-37033792)
chr1 (14-65)||(13549709-13549760)
chr1 (248-318)||(28242041-28242112)
chr1 (86-173)||(31658915-31659002)
chr1 (208-318)||(37167909-37168020)
chr1 (29-134)||(37070244-37070349)
chr1 (248-318)||(47114825-47114895)
chr1 (7-47)||(31928387-31928427)
chr1 (91-142)||(13659735-13659786)
chr1 (29-173)||(13598837-13598982)
chr1 (18-75)||(19753996-19754053)
chr1 (207-318)||(9109846-9109958)
chr1 (28-112)||(30476892-30476976)
chr1 (56-119)||(29652307-29652369)
chr1 (86-169)||(49918026-49918109)
chr1 (86-172)||(4553053-4553139)
chr1 (95-140)||(10924909-10924954)
chr1 (29-134)||(3282183-3282288)
chr1 (95-144)||(1833207-1833256)
chr1 (96-132)||(9986895-9986931)
chr1 (94-133)||(13604299-13604336)
[»] chr5 (39 HSPs)
chr5 (166-318)||(40146830-40146984)
chr5 (11-173)||(5057433-5057595)
chr5 (30-194)||(42428801-42428966)
chr5 (179-318)||(5057633-5057771)
chr5 (21-173)||(37438757-37438910)
chr5 (187-318)||(38746597-38746728)
chr5 (216-318)||(213089-213191)
chr5 (59-173)||(42426639-42426754)
chr5 (204-318)||(28277922-28278038)
chr5 (80-196)||(30683289-30683405)
chr5 (216-318)||(16642321-16642424)
chr5 (30-173)||(13487825-13487967)
chr5 (182-318)||(27015119-27015255)
chr5 (52-173)||(40146692-40146813)
chr5 (62-173)||(32636476-32636588)
chr5 (90-174)||(38746451-38746535)
chr5 (80-173)||(13239423-13239516)
chr5 (208-318)||(27638059-27638169)
chr5 (56-133)||(212991-213068)
chr5 (216-316)||(30792861-30792962)
chr5 (120-194)||(533492-533566)
chr5 (210-317)||(35615786-35615894)
chr5 (56-134)||(11916514-11916592)
chr5 (29-134)||(14520706-14520811)
chr5 (207-316)||(30802553-30802663)
chr5 (207-316)||(33906578-33906687)
chr5 (120-173)||(535614-535667)
chr5 (29-134)||(12083693-12083798)
chr5 (207-317)||(14689853-14689963)
chr5 (67-173)||(16651026-16651133)
chr5 (86-132)||(28751027-28751073)
chr5 (207-318)||(316371-316489)
chr5 (29-173)||(9352850-9352995)
chr5 (120-173)||(39468936-39468989)
chr5 (147-194)||(15464937-15464984)
chr5 (94-133)||(30683269-30683308)
chr5 (250-323)||(4160289-4160363)
chr5 (29-63)||(29402592-29402626)
chr5 (150-194)||(3075996-3076040)
[»] chr6 (32 HSPs)
chr6 (178-318)||(17762570-17762710)
chr6 (187-318)||(21593258-21593389)
chr6 (179-317)||(26830570-26830708)
chr6 (188-318)||(3809154-3809284)
chr6 (56-173)||(21593095-21593212)
chr6 (91-245)||(603557-603723)
chr6 (86-173)||(22964135-22964222)
chr6 (86-173)||(23824171-23824258)
chr6 (82-173)||(9183414-9183505)
chr6 (231-318)||(22425272-22425358)
chr6 (208-318)||(2973384-2973495)
chr6 (208-318)||(5043241-5043351)
chr6 (56-173)||(31979954-31980071)
chr6 (99-162)||(17759427-17759490)
chr6 (227-318)||(25072817-25072909)
chr6 (62-134)||(31086020-31086092)
chr6 (95-173)||(3809331-3809406)
chr6 (99-173)||(26661421-26661495)
chr6 (99-173)||(26767392-26767466)
chr6 (69-134)||(5017050-5017115)
chr6 (80-173)||(5407312-5407406)
chr6 (80-173)||(5411637-5411731)
chr6 (96-173)||(24714809-24714885)
chr6 (179-267)||(26661533-26661621)
chr6 (179-267)||(26767504-26767592)
chr6 (263-318)||(26800438-26800494)
chr6 (86-173)||(10076764-10076851)
chr6 (83-173)||(18234520-18234611)
chr6 (82-173)||(24435541-24435632)
chr6 (87-133)||(21272563-21272609)
chr6 (81-173)||(5757046-5757139)
chr6 (80-112)||(33160799-33160831)
[»] chr2 (35 HSPs)
chr2 (178-318)||(45726513-45726653)
chr2 (182-309)||(35447338-35447465)
chr2 (21-171)||(17863804-17863955)
chr2 (56-194)||(39284543-39284682)
chr2 (203-317)||(17450199-17450313)
chr2 (216-317)||(1632178-1632279)
chr2 (79-194)||(29867549-29867665)
chr2 (216-307)||(7450921-7451013)
chr2 (59-173)||(35447505-35447619)
chr2 (80-193)||(6595378-6595492)
chr2 (80-173)||(36988479-36988573)
chr2 (86-173)||(2837248-2837335)
chr2 (208-318)||(42288554-42288663)
chr2 (32-173)||(14698528-14698669)
chr2 (62-173)||(20522659-20522771)
chr2 (86-173)||(36318413-36318501)
chr2 (187-318)||(42262054-42262186)
chr2 (79-173)||(34389287-34389382)
chr2 (29-173)||(21630382-21630526)
chr2 (56-133)||(45726453-45726530)
chr2 (67-134)||(33528177-33528244)
chr2 (29-173)||(10706768-10706913)
chr2 (81-173)||(45099426-45099519)
chr2 (29-173)||(17865614-17865759)
chr2 (29-134)||(23077987-23078092)
chr2 (227-318)||(30218478-30218570)
chr2 (82-134)||(39483353-39483405)
chr2 (62-134)||(13569807-13569879)
chr2 (247-318)||(33647820-33647892)
chr2 (182-317)||(24397651-24397779)
chr2 (18-64)||(7450786-7450832)
chr2 (62-134)||(8389698-8389768)
chr2 (82-173)||(33118572-33118663)
chr2 (120-173)||(5723658-5723712)
chr2 (81-173)||(28258745-28258838)
[»] scaffold0466 (2 HSPs)
scaffold0466 (7-112)||(6728-6833)
scaffold0466 (179-318)||(6912-7051)
[»] scaffold0286 (2 HSPs)
scaffold0286 (182-318)||(11145-11281)
scaffold0286 (72-173)||(11003-11104)
[»] scaffold0176 (2 HSPs)
scaffold0176 (216-318)||(18446-18547)
scaffold0176 (86-173)||(17668-17755)
[»] scaffold0197 (1 HSPs)
scaffold0197 (207-318)||(1850-1962)
[»] scaffold0002 (2 HSPs)
scaffold0002 (187-318)||(490889-491021)
scaffold0002 (95-173)||(434217-434297)
[»] scaffold0066 (1 HSPs)
scaffold0066 (72-173)||(20819-20920)
[»] scaffold0006 (4 HSPs)
scaffold0006 (91-142)||(149496-149547)
scaffold0006 (29-173)||(6122-6267)
scaffold0006 (62-173)||(2930-3043)
scaffold0006 (94-133)||(132956-132993)
[»] scaffold0036 (1 HSPs)
scaffold0036 (29-133)||(86066-86168)
[»] scaffold0016 (1 HSPs)
scaffold0016 (85-173)||(114262-114350)
[»] scaffold0098 (2 HSPs)
scaffold0098 (94-133)||(45582-45619)
scaffold0098 (86-173)||(45635-45723)


Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 318
Target Start/End: Original strand, 11383384 - 11383709
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgatttt--ctaggcagtgagcattgttttcagggtgttcaatcgtgac 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||| ||||| ||||||| |||| |||||    
T  11383384 tttggtgtttggaaaatgttggaatcgtgacacgattttggcatcgtggcacgattttttctagacagtgagcatggtttttagggtgtccaattgtgac 11383483  T
Q  105 acgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtc------------gtacgcatcaaacgtgtcacgat 192  Q
    ||||||||||||||||||| |||||||||| ||||||||  ||| |||||| |||||| ||||||            ||||||||||| |||||||||||    
T  11383484 acgattttgggaaaacgtgacacgattttcagcttgctgggcaaattttcaagataaggttggtcgtactttgggtcgtacgcatcaaccgtgtcacgat 11383583  T
Q  193 tttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggtttt 292  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||||||||| |||||||||||||||    
T  11383584 tttgtccggatctgaatactatgtaagcactccatgtcccatttgttaggcaagcttggtgaatctcatggaaaccaaaggagggaacttttagggtttt 11383683  T
Q  293 agatactaaaagttgagggtctttgg 318  Q
    |||||||||| |||||||||||||||    
T  11383684 agatactaaaggttgagggtctttgg 11383709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 22975914 - 22976080
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacac 106  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||| ||| ||||||||| ||||||||| |||| ||||||||||||| ||||||||||||    
T  22975914 tttggtgtttggaaaatgttggaatcacgacatgattttgacatcgtgacacgattttttaggcagtgggcatggttttcagggtgtccaatcgtgacac 22976013  T
Q  107 gattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||||| |||||||||| |||||||  |||||||||||||||||| || |||||||    
T  22976014 gattttgggaaaacgtgacacgattttcagcttgcttgacaagttttcaggataaggtttgtcgtac 22976080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 318
Target Start/End: Original strand, 40221227 - 40221468
Alignment:
Q  90 gtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagatt------------ggtcgtacgcat 177  Q
    |||| |||||||| |||||||||||||||||||| |||||||||| ||||| || ||| |||||||||||||| ||            |||||||||||     
T  40221227 gtgtccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgttggacacgttttcaggataaggtttgtcgtgccttgggtcgtacgcac 40221326  T
Q  178 caaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaagga-gg 276  Q
    |||||||||||||||||||| ||||||||||||| || |||||| ||  |||||||||||||| |||| ||||||||||||||| ||||||| |||| ||    
T  40221327 caaacgtgtcacgattttgttcggatctgaacacaatataagcattctttgacccatttgttgagtaagcttggtgaatctcatggaaaccataggaggg 40221426  T
Q  277 aaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
     ||||||||||||||| ||||||||| || || |||||||||    
T  40221427 gaacttttagggtttttgatactaaaggtggaaggtctttgg 40221468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 15212432 - 15212550
Alignment:
Q  56 cacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  15212432 cacgattttctaggcagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttc 15212531  T
Q  155 aggataagattggtcgtac 173  Q
    |||||||| ||||||||||    
T  15212532 aggataaggttggtcgtac 15212550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 22976126 - 22976257
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| | |||||||||||||  |||||||||    
T  22976126 cacgactttgtctggatctgaacactatgtaagcactccataacccatttgttgggtaagcttagtgaatctcttcgaaaccaaaggagtgaacttttag 22976225  T
Q  287 ggttttagatactaaaagttgagggtctttgg 318  Q
     ||||||||||||||| |||||||||||||||    
T  22976226 agttttagatactaaaggttgagggtctttgg 22976257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 42435564 - 42435436
Alignment:
Q  190 gattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt 289  Q
    |||||||||||| ||||||||| || || ||| ||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  42435564 gattttgtccggttctgaacacaatatatgcattctttgacccatttgttcggtaagcttggtgaatctcatggaaaccaaaggaggaaacttttagggt 42435465  T
Q  290 tttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||| |||||||||||||||    
T  42435464 tttagatactaaaggttgagggtctttgg 42435436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 44353416 - 44353518
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  44353416 taagcaatccatgactcatttgttgggtaagcttggtgaatctcatggaaaccaaaggagggaacttttagggttttagatactaaaggttgagggtctt 44353515  T
Q  316 tgg 318  Q
    |||    
T  44353516 tgg 44353518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 4283133 - 4283269
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||| ||||||| ||||||||||||| ||  ||||| ||  |||||||||||||| |||| ||||||||||||||| |||||||||||||  ||||    
T  4283133 cgtgacaccattttgttcggatctgaacacaatacaagcattctttgacccatttgttgtgtaagcttggtgaatctcatggaaaccaaaggagagaact 4283232  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||||| |||||||||||||||    
T  4283233 tttagggttttagatactaaaggttgagggtctttgg 4283269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 30143005 - 30143106
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  30143005 gtgagcatgttttgcagggtgtccaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttaaggataaggttggtcgt 30143104  T
Q  172 ac 173  Q
    ||    
T  30143105 ac 30143106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 12703137 - 12703043
Alignment:
Q  79 ttgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |||||||||||| ||||||||||    
T  12703137 ttgttttcagagtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcagcttgctaagcaagctttcaggataaggttggtcgtac 12703043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 4731335 - 4731422
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||| |||||||||||||||||||||||||| || || |||||||||||||||| ||| |||||||| ||||||||||||||||    
T  4731335 cagggtgtccaatcgtgacacgattttgggaaaacatgacatgattttcggcttgctggacacgttttcagaataagattggtcgtac 4731422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 4733502 - 4733576
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggata 160  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||    
T  4733502 cagggtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcggctttctaaacacgttttcaggata 4733576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 27810975 - 27811061
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgta 172  Q
    |||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||  ||||||||||||||||| |||||||||    
T  27810975 cagggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgta 27811061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 34257002 - 34256908
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||||| || |||||||||||||||||||||||| |||| ||||||||| |||||||||| |||| ||||||||||||||||||| ||||    
T  34257002 tgttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgagcaagattttcaggataagattggttgtac 34256908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 42435714 - 42435613
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  ||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||   ||||||||||||||||| ||||||||    
T  42435714 gtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaacgtgacacgattttcgtcttgcttggcaagttttcaggataaggttggtcgt 42435615  T
Q  172 ac 173  Q
    ||    
T  42435614 ac 42435613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 1746716 - 1746622
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||||| || |||||||||||||||||||||||| |||| ||||||||| |||||||||  |||| ||||||||||||| ||||||||||    
T  1746716 tgttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtac 1746622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 43036086 - 43036187
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  ||| |||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| ||  ||||||||||||||||| ||| ||||    
T  43036086 gtgagcatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattttcgacttgttgggcaagttttcaggataaggttgatcgt 43036185  T
Q  172 ac 173  Q
    ||    
T  43036186 ac 43036187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 20686586 - 20686498
Alignment:
Q  234 tttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttggtga 321  Q
    |||||||||||| || ||||||||||||||||||||||||||| |||||| |||||  |||||||||||| ||||||| ||||||||||    
T  20686586 tttgttgggtaagctcggtgaatctcattgaaaccaaaggagggaactttcagggtacttagatactaaatgttgaggatctttggtga 20686498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 3000078 - 2999965
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaac-ttggtgaatctcattgaaaccaaaggaggaaacttttaggg-ttttagatactaaaag 304  Q
    |||||| | ||||||||  |||||||| ||||||   |||| |||||||||||||| |||||||||||||  |||||||||||  ||||||||||||| |    
T  3000078 aacactgtttaagcactttatgacccaattgttgaaaaaaccttggtgaatctcatagaaaccaaaggagagaacttttagggaatttagatactaaagg 2999979  T
Q  305 ttgagggtctttgg 318  Q
    ||||||||||||||    
T  2999978 ttgagggtctttgg 2999965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 33351789 - 33351882
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaac 120  Q
    ||||||||||||||||| |  |  ||| ||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||    
T  33351789 gaatcgtgacacgatttagcaagcgtgtcacgattttttaggcagtgaacatggttttgcagggtgtccaatcgtgacacgattttgggaaaac 33351882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 1345861 - 1345775
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||||||||||| | ||||| ||| ||| |||||| |||||||  ||| |||||||||||||| ||||||||||    
T  1345861 cagggtgttcaatcgtgacacgattt-gagaaaatgtgacacaattttcagcttgcttgacacgttttcaggataaggttggtcgtac 1345775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 42497884 - 42497979
Alignment:
Q  79 ttgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||||| || ||||||||||||||||||||||||  ||| ||||||| | |||||||||  |||| ||||||||||||| || |||||||    
T  42497884 ttgttttcagggcgtccaatcgtgacacgattttgggaaattgtgacacgattattggcttgctgggcaagattttcaggataaggttagtcgtac 42497979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 34254826 - 34254732
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||||| ||  |||| |||||||||||||||||| |||| ||||||||| || ||||||  |||| ||||||||||||| ||||||||||    
T  34254826 tgttttcagggcgtctaatcatgacacgattttgggaaatcgtgacacgatttttggattgctgggcaagattttcaggataaggttggtcgtac 34254732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 4456590 - 4456446
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||||| |||||| |||||| |||| |||||||| ||||||||| ||||| |||||||||||||| |      
T  4456590 aatcgtgacacgatttcatcaacgtgtcacgattttc-aggcagggagcatggtttctcagggtgctcaatcgtgtcacgaatttgggaaaacgtgacgt 4456492  T
Q  128 gattttc-ggcttgctgaacaagttttcaggataagattggtcgta 172  Q
    |||||||   ||||||||| | ||||||| |||||| |||||||||    
T  4456491 gattttcaaacttgctgaatacgttttcacgataaggttggtcgta 4456446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 31217928 - 31218021
Alignment:
Q  81 gttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||| || |||| ||||||||||||||||||| |||| ||||||||| |||||| ||  |||| |||| |||||||| ||||||||||    
T  31217928 gttttcagggcgtccaattgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagatttttaggataaggttggtcgtac 31218021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 5702024 - 5702100
Alignment:
Q  59 gattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||||||||| | |||||||| ||||| ||||||| ||||||||| ||||||||||| |||||||| ||||||||||    
T  5702024 gattttctagacggtgagcatggttttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacacgattttc 5702100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 4743684 - 4743597
Alignment:
Q  87 agggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||| ||||||||||||||||||| | ||||||| ||||||||||| ||||||   || | ||||||||||||| ||||||||||    
T  4743684 agggtgtccaatcgtgacacgattttgaggaaacgtgacacgattttcgacttgcttggcacgtttttcaggataaggttggtcgtac 4743597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 19175275 - 19175353
Alignment:
Q  56 cacgattttctaggcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||||||||| |||||| |||||| |||| |||||||| ||||||||| |||||||||||||||||||| || |||||||    
T  19175275 cacgattttc-aggcagggagcatggtttctcagggtgctcaatcgtgtcacgattttgggaaaacgtgacatgattttc 19175353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 4283039 - 4283092
Alignment:
Q  120 cgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  4283039 cgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtac 4283092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 10014822 - 10014923
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  |||||||||| | ||||||||||||||||||||| || | || ||||||||| ||| ||||   || |||| ||||||||| ||||||||    
T  10014822 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 10014921  T
Q  172 ac 173  Q
    ||    
T  10014922 ac 10014923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 173
Target Start/End: Complemental strand, 19945836 - 19945743
Alignment:
Q  81 gttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||| || |||||||||||||||||| ||||| |||| ||||||||| |||||| ||   ||| ||||||||||||| ||| ||||||    
T  19945836 gttttcagggcgtccaatcgtgacacgattttaggaaatcgtgacacgatttttggcttgttggggaagattttcaggataaggttgatcgtac 19945743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 40585336 - 40585449
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||| ||| |||||||||  |||||||||||||| || | |||| | ||||||||  |||||||||||   ||||||||| || ||||||||||||| ||    
T  40585336 aacattatttaagcactcattgacccatttgttgcgtgagcttgattaatctcatgaaaaccaaaggaaataacttttagagtatttagatactaaaggt 40585435  T
Q  306 tgagggtctttggt 319  Q
    | || |||||||||    
T  40585436 taagagtctttggt 40585449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 10239679 - 10239782
Alignment:
Q  187 cacgattttgtccggatctgaa-cactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaactttta 285  Q
    ||||||||||   ||||||||| |||||| |||| ||||| |||||| ||||||| |||| ||||  ||||||||| |||| |||  |||| ||||||||    
T  10239679 cacgattttgataggatctgaaacactatttaagaactccttgacccttttgttgagtaagcttgacgaatctcatggaaatcaatagagggaactttta 10239778  T
Q  286 gggt 289  Q
    ||||    
T  10239779 gggt 10239782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 44353284 - 44353318
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacga 41  Q
    |||||||||||||||||||||||| ||||||||||    
T  44353284 tttggtgtttggaaaatgttggaaccgtgacacga 44353318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 2627428 - 2627464
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattt 132  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  2627428 aatcgtgacacgattttgggaaatcgtgacacgattt 2627464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 3817840 - 3817784
Alignment:
Q  257 ctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggt 312  Q
    ||||| ||||||||||||| |||||||||||||  ||||| |||||| |||||||||    
T  3817840 ctcatggaaaccaaaggagaaaacttttagggtacttagaaactaaaggttgagggt 3817784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 7289631 - 7289667
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattt 132  Q
    |||||||||||||| |||||||| |||||||||||||    
T  7289631 aatcgtgacacgatcttgggaaatcgtggcacgattt 7289667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 81071 - 80905
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacac 106  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  81071 tttggtgtttggaaaatgttggaatcgtgacacgattttggcatcgtggtacgattttctaggcagtgagcattgttttcagggtatccaatcgtgacac 80972  T
Q  107 gattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  80971 gattttgggaaaacgtggcacgattttcggcttgctgggcaagttttcaggataaggttggtcgtac 80905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 80864 - 80728
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||||||||||||||||||| || |||||| ||  | |||||||||||||  || ||||||||||||||| |||||||||||||| ||||    
T  80864 cgtgacacgattttgtccggatctgaacacaatataagcattctttcacccatttgttggaaaatcttggtgaatctcatggaaaccaaaggagggaact 80765  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||| | |||||||||||||||    
T  80764 tttagggttttagatactagaggttgagggtctttgg 80728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 1e-72; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 55302752 - 55302587
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacac 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55302752 tttggtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacac 55302653  T
Q  107 gattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    || ||||||||||||||  ||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  55302652 ga-tttgggaaaacgtgatacgattttcggcttgctgggcaagttttcaggataaggttggtcgtac 55302587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 72 - 318
Target Start/End: Complemental strand, 49200174 - 49199916
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  ||| |||||||| ||||||||||||||| ||||| ||||||| |||||||||||||||||||  || |||||||||||||| ||||||||    
T  49200174 gtgagcatgttttgcagggtgtccaatcgtgacacgatgttggggaaacgtgacacgattttcggcttgctgggcatgttttcaggataaggttggtcgt 49200075  T
Q  172 ac------------gcatcaaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctc 259  Q
    ||            ||| |||| ||||||||||||||||||||||||||||| || || ||| ||  ||||||||||||||||||| |||||||||||||    
T  49200074 accttgggtcgtacgcaccaaatgtgtcacgattttgtccggatctgaacacaatatatgcattctttgacccatttgttgggtaagcttggtgaatctc 49199975  T
Q  260 attgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    || |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  49199974 atggaaaccaaaggagggaacttttagggttttagatactaaaggttgagggtctttgg 49199916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 55302546 - 55302410
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  55302546 cgtgacacaattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaagcttggtgaatttcattgaaaccaaaggaggaaact 55302447  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||||||||||||||||||||||||    
T  55302446 tttagggttttagatactaaaagttgagggtctttgg 55302410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 4569331 - 4569497
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacac 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| ||||| ||||||| |||||||||||     
T  4569331 tttggtgtttgaaaaatgttggaatcgtgacacgattttggcatcgtggcacaattttctaggcagtgcgcatggtttttagggtgtccaatcgtgacat 4569430  T
Q  107 gattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  4569431 gattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtac 4569497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 86 - 318
Target Start/End: Original strand, 34490691 - 34490936
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggt------------cgtac 173  Q
    |||||| | |||||||||||||||||||| |||||||| |||||||||||||||  ||  ||||||||||||||||| |||||            |||||    
T  34490691 cagggtatccaatcgtgacacgattttggaaaaacgtgacacgattttcggcttattgggcaagttttcaggataaggttggttgtaccttgggtcgtac 34490790  T
Q  174 gcatcaaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttg-ttgggtaaacttggtgaatctcattgaaaccaaag 272  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||  ||| | || ||||||||||||||| ||||||||||    
T  34490791 gcaccaaacgtgtcacgattttgtctggatctgaacactatataagcactccatcacccattttattgtgaaagcttggtgaatctcatggaaaccaaag 34490890  T
Q  273 gaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||  ||||||||||||||||||||||||| |||||||||||||||    
T  34490891 gagagaacttttagggttttagatactaaaggttgagggtctttgg 34490936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 25 - 318
Target Start/End: Original strand, 36018259 - 36018574
Alignment:
Q  25 ttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcat-tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtg 123  Q
    |||||||||||||||||||  |  |  ||| |||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||    
T  36018259 ttggaatcgtgacacgattacgcaagcgtgtcacgattttctaggcagtgagcatattttttctgggtgctcaatcgtgacacgattttgggaaaacgtg 36018358  T
Q  124 gcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacgcatc--------------------aaacgtgtcacgattttgtccggat 203  Q
     ||| |||||||||||||||  || ||||| |||||||| ||||||||||||| |                    ||||||| |||||||||| ||||||    
T  36018359 acacaattttcggcttgctgggcacgtttttaggataaggttggtcgtacgcaccaaccatgtcacgatttgggaaaacgtgacacgattttgcccggat 36018458  T
Q  204 ctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaa 302  Q
    ||||||||||  || ||| ||  ||||||||||||||| ||| ||||||||||||||| |||||||||||||  |||||| ||||| | |||||||||||    
T  36018459 ctgaacactacatatgcattctttgacccatttgttggataagcttggtgaatctcatggaaaccaaaggagagaactttcagggtatgtagatactaaa 36018558  T
Q  303 agttgagggtctttgg 318  Q
     |||||||||||||||    
T  36018559 ggttgagggtctttgg 36018574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 40912929 - 40913061
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaa-cttggtgaatctcattgaaaccaaaggaggaaactttta 285  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||    
T  40912929 cacgattttgtccggatctgaacactatgtaagcattctttgacccatttgttgggtaaagcttggtgaatctcatggaaaccaaaggaggggactttta 40913028  T
Q  286 gggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||| ||| |||||||||||    
T  40913029 gggttttagatactaaaggtttagggtctttgg 40913061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 28074226 - 28074340
Alignment:
Q  204 ctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaa 303  Q
    |||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  28074226 ctgaactctatttaagcacttcatgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggaggaaacttttagggttttagatactaaag 28074325  T
Q  304 gttgagggtctttgg 318  Q
    |||||||||||||||    
T  28074326 gttgagggtctttgg 28074340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 29812681 - 29812827
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggca 126  Q
    ||||||||||||||||| |  | |||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||    
T  29812681 gaatcgtgacacgatttagcaagtgtgtcacgattttctaggcagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgaca 29812780  T
Q  127 cgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| | |||||||  ||||||||||||||||| ||||||||||    
T  29812781 cgatttttgtcttgctgggcaagttttcaggataaggttggtcgtac 29812827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 43404314 - 43404178
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||| ||||||||||||||| || || | | ||  ||||||||||||||||| | ||||||||||||||| ||||||||| |||| ||||    
T  43404314 cgtgacacgattttctccggatctgaacacaatatatgtattctttgacccatttgttgggtgagcttggtgaatctcatggaaaccaaatgagggaact 43404215  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||||||||||||||||||||||||    
T  43404214 tttagggttttagatactaaaagttgagggtctttgg 43404178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 54593296 - 54593428
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||| |  || ||||||||||||||| |||||||||||||| |||||||||    
T  54593296 cacgattttgcccgaatctgaacactatgtaagcactccatgacccatttgttcgaaaagcttggtgaatctcatggaaaccaaaggagggaacttttag 54593395  T
Q  287 ggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||| | ||||||||||| |||||||||| ||||    
T  54593396 ggtatgtagatactaaaggttgagggtccttgg 54593428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 318
Target Start/End: Original strand, 4569535 - 4569674
Alignment:
Q  179 aaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaa 278  Q
    ||||||| ||||||||||  ||||| ||||||  || |||||| ||  |||||||||||||| |||| ||||||||||||||| |||||||||||||| |    
T  4569535 aaacgtgacacgattttgctcggatttgaacaaaatataagcattctttgacccatttgttgagtaagcttggtgaatctcatggaaaccaaaggaggga 4569634  T
Q  279 acttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  4569635 acttttagggttttagatactaaaggttgagggtctttgg 4569674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 31340810 - 31340664
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttggg-aaaacgtggca 126  Q
    ||||||||||||||||| |  |  ||| |||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||| || ||    
T  31340810 gaatcgtgacacgatttggcaaccgtgtcacgattttctaggcagtgagcatggttttcagggtgtccaatcgtgacatgattttgggaaaaacatgaca 31340711  T
Q  127 cgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||| ||  ||||||||||||||||| ||||||||||    
T  31340710 cgattttcggcttgttgggcaagttttcaggataaggttggtcgtac 31340664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 30235745 - 30235848
Alignment:
Q  216 taagcactccatgacccattt-gttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtct 314  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  30235745 taagcactccatgacccattttgttgggtaagcttggtgaatctcaatgaaaccaaaggagagaacttttagggttttagatactaaaggttgagggtct 30235844  T
Q  315 ttgg 318  Q
    ||||    
T  30235845 ttgg 30235848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 194
Target Start/End: Original strand, 51398472 - 51398611
Alignment:
Q  56 cacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    |||||||||||||| ||||||||| ||||| |||||||| |||| |||||||||||||||||||||||| ||| |||||||| ||| ||  ||||||||     
T  51398472 cacgattttctaggtagtgagcatggttttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacaattttcggtttgttgggcaagttttt 51398571  T
Q  155 aggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    |||||| | ||||||||||||| |||||||||||||||||    
T  51398572 aggatatggttggtcgtacgcaccaaacgtgtcacgattt 51398611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 53 - 173
Target Start/End: Original strand, 54593130 - 54593250
Alignment:
Q  53 tggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttt 152  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||||| | |||||||||||||||| ||||||||||  |||||||  || ||||    
T  54593130 tggcacgattttctaggcagtgagcatggttttcatggtattcaatcgtgactcaattttgggaaaacgtgacacgattttcaacttgctgggcacgttt 54593229  T
Q  153 tcaggataagattggtcgtac 173  Q
    |||||||||| ||||||||||    
T  54593230 tcaggataaggttggtcgtac 54593250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 43404448 - 43404355
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||    
T  43404448 tgttttctggatgttcaatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggtcggtcgtac 43404355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 31340614 - 31340502
Alignment:
Q  190 gattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt 289  Q
    |||||||||| ||||||||||| || || ||| ||  ||||||||||||||||||| |||||||||||| || |||||||||||||  ||||||||||||    
T  31340614 gattttgtccagatctgaacacaatatatgcattctttgacccatttgttgggtaagcttggtgaatcttatggaaaccaaaggagagaacttttagggt 31340515  T
Q  290 tttagatactaaa 302  Q
    |||||||||||||    
T  31340514 tttagatactaaa 31340502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 43402363 - 43402235
Alignment:
Q  190 gattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt 289  Q
    |||||||| | ||||||||||  || || ||| ||  |||| |||||||||||| | |||||||||||| || |||||||||||||| ||||||||||||    
T  43402363 gattttgttctgatctgaacataatatatgcattctttgactcatttgttgggtgagcttggtgaatcttatggaaaccaaaggagggaacttttagggt 43402264  T
Q  290 tttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||| |||||||||||||||    
T  43402263 tttagatactaaaggttgagggtctttgg 43402235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 6096328 - 6096222
Alignment:
Q  67 aggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattg 166  Q
    ||||| ||||||| |||| |||||||| |||| |||||||||||||||||||||||| |||||||||||||||  || |||| ||||||||||||| |||    
T  6096328 aggcactgagcatggtttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacgattttcggcttattggacaaattttcaggataaggttg 6096229  T
Q  167 gtcgtac 173  Q
    |||||||    
T  6096228 gtcgtac 6096222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 29810518 - 29810632
Alignment:
Q  60 attttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcagga 158  Q
    |||||||||||| ||||||| ||||| |||||||| |||||||||||||||||| | ||||||| |||| ||||| ||||||||| |||| |||||||||    
T  29810518 attttctaggcattgagcatggttttgcagggtgtccaatcgtgacacgattttagaaaaacgtagcacaatttttggcttgctggacaaattttcagga 29810617  T
Q  159 taagattggtcgtac 173  Q
    |||| ||||||||||    
T  29810618 taaggttggtcgtac 29810632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 21711783 - 21711638
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   ||  ||| |||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| |||     
T  21711783 aatcgtgacacgatttcttcaacgtgtcacgattttccaggcagtgagcatggttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacaca 21711684  T
Q  129 attttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||   ||||||||  | |||||| ||||||| ||||||||||    
T  21711683 attttcaaacttgctgagtacgttttccggataaggttggtcgtac 21711638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 47303872 - 47303975
Alignment:
Q  216 taagcactccatgacccattt-gttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtct 314  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||| |||| ||||||||  |||||||| |||||||||||||||| ||||| |||||    
T  47303872 taagcactccacgacccattttgttgggtaagcttggtgaatctcatggaaatcaaaggagagaacttttatggttttagatactaaatgttgaaggtct 47303971  T
Q  315 ttgg 318  Q
    ||||    
T  47303972 ttgg 47303975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 5236954 - 5236861
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| | |||| |||||||||||| |||||||||||||||| |||||||||||||||||||   |||||||||||||||| ||||||||||    
T  5236954 tgttttctgagtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggaaagttttcaggataagtttggtcgtac 5236861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 46173163 - 46173279
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttca 155  Q
    |||||||| | ||||||||||||| |||| |||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||  || |||||||    
T  46173163 cacgatttccaaggcagtgagcatggtttgcagggtgtccaatcgtgacacgattttgggaaaacatgacacga-ttccggcttgttgggcacgttttca 46173261  T
Q  156 ggataagattggtcgtac 173  Q
    ||||||| ||||||||||    
T  46173262 ggataaggttggtcgtac 46173279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 6096176 - 6096044
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccattt-gttgggtaaacttggtgaatctcattgaaaccaaaggaggaaactttta 285  Q
    |||||||||||| |||| |||||||  | || ||| ||  |||||||||| |||||| || ||||||||||||||| |||| || |||||  ||||||||    
T  6096176 cacgattttgtcaggatatgaacacagtatatgcattctttgacccattttgttgggaaagcttggtgaatctcatggaaatcagaggagagaactttta 6096077  T
Q  286 gggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||| |||||||||||||||    
T  6096076 gggttttagatactaaaggttgagggtctttgg 6096044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 43402505 - 43402417
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggt 168  Q
    ||||||| || ||||||||||||||||||||||||  ||||||| |||||||||||||||||||  ||||||||||||||||| |||||    
T  43402505 tgttttctggatgttcaatcgtgacacgattttggagaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggt 43402417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 40592340 - 40592431
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||| | ||||||||| |||||||||||||||||||| ||||||||||  ||||||| ||| |||||||||||||| ||||||||||    
T  40592340 ttttcagggagctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctggacacgttttcaggataaggttggtcgtac 40592431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 44331248 - 44331333
Alignment:
Q  88 gggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||   | |||||||||||||| ||||||||||    
T  44331248 gggtgttcaatcgtgacacgattttgggaaaaagtgacacgatttttggcttgctgggtacgttttcaggataaggttggtcgtac 44331333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 41820078 - 41819966
Alignment:
Q  208 acactatgtaagcactccatgacccattt-gttgggtaaa-cttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagt 305  Q
    ||||||| ||||||||| ||||||||||| | ||   ||| ||||||||||||||| |||||||||||||  |||||||||| |||||||||||||| ||    
T  41820078 acactatttaagcactctatgacccattttggtgaaaaaagcttggtgaatctcatggaaaccaaaggagataacttttaggtttttagatactaaaggt 41819979  T
Q  306 tgagggtctttgg 318  Q
    |||||||||||||    
T  41819978 tgagggtctttgg 41819966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 7761935 - 7762028
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||||| || ||||||||||||||||||||| ||||||| ||||||||| |||||||||  |||| ||||||||||||| ||||||||||    
T  7761935 tgttttcagggcgtccaatcgtgacacgattttggg-aaacgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtac 7762028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 7764122 - 7764216
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||| |||||| ||  |||| |||| |||||||| ||||||||||    
T  7764122 tgttttcagggcgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgttgggcaagatttttaggataaggttggtcgtac 7764216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 316
Target Start/End: Complemental strand, 35139270 - 35139160
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||||||| ||| |||||  |||||||||||||  |||| |||||||||| |||| ||||||||||||||  |||||| |||| ||||||||||||| ||    
T  35139270 aacactatttaaacactctttgacccatttgttaagtaagcttggtgaatttcatggaaaccaaaggagggtactttttgggtatttagatactaaacgt 35139171  T
Q  306 tgagggtcttt 316  Q
    |||||||||||    
T  35139170 tgagggtcttt 35139160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 173
Target Start/End: Complemental strand, 5258641 - 5258548
Alignment:
Q  81 gttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||| || || |||||||||||||||||||||||| |||| ||||||||| |||||||||  |||| ||||||||||||| ||||||||||    
T  5258641 gttttcaaggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtac 5258548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 5434410 - 5434324
Alignment:
Q  232 catttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttg 317  Q
    ||||||||| |||| ||||||||||||||| |||| ||||||||| |||||||||| | ||||||||| ||||||| ||||||||||    
T  5434410 catttgttgagtaagcttggtgaatctcatggaaatcaaaggagggaacttttaggatatttagataccaaaagttaagggtctttg 5434324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 9636626 - 9636532
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||||| || ||||||||||| |||||||||||| | || ||||||||| |||||| || ||||| ||||||||||||| ||||||||||    
T  9636626 tgttttcagggcgtccaatcgtgacatgattttgggaaatcatgacacgatttttggcttgatggacaagattttcaggataaggttggtcgtac 9636532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 27027261 - 27027183
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||||||| | ||||||||||||| |||| ||| ||| ||||||||| |||||||||||||||||||| ||||||||||    
T  27027261 cacgatttcccaggcagtgagcatggtttgcagagtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 27027183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 40912800 - 40912882
Alignment:
Q  90 gtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgta 172  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||| ||  ||||||||| |||||||  ||||||||    
T  40912800 gtgttcaatcgtgatacaattttgggaaaacgtgacacgattttcggcttgttgggcaagttttctggataaggctggtcgta 40912882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 45094834 - 45094928
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||||| || |||||||||||| ||||||||||| |||| ||||||||| |||||| ||  |||| ||||||||||||| ||||||||||    
T  45094834 tgttttcagggcgtccaatcgtgacacaattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtac 45094928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 8127185 - 8127068
Alignment:
Q  56 cacgattttctaggcagtgagcattgt-tttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    ||||||||| |||||||||||||| |  |||||||||| ||||||||| |||||||||||||||  ||| ||||||||||  ||||||    | ||||||    
T  8127185 cacgattttttaggcagtgagcatgggctttcagggtgctcaatcgtgtcacgattttgggaaagtgtgacacgattttcaacttgctaggtacgttttc 8127086  T
Q  155 aggataagattggtcgta 172  Q
    |||||||| |||||||||    
T  8127085 aggataaggttggtcgta 8127068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 26324042 - 26323957
Alignment:
Q  234 tttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||||||||| | | ||||||||||||| |||||||||| ||||    
T  26324042 tttgttgagtaagtttggtgaatctcatggaaaccaaaggaggaaacttttaagatatttagatactaaaggttgagggtcattgg 26323957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 27038623 - 27038518
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   ||  ||| |||||||| | ||||||||||||| |||| ||||||| |||||| || |||||||||||||||| ||| ||||    
T  27038623 aatcgtgacacgatttcatcaacgtgacacgatttcccaggcagtgagcatggtttgcagggtgctcaatcatgtcacgattttgggaaaatgtgacacg 27038524  T
Q  129 attttc 134  Q
    ||||||    
T  27038523 attttc 27038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 35926072 - 35925967
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   ||  ||| |||||||| | ||||||||||||| |||| ||||||| ||||||||| ||||| |||| ||||||||| ||||    
T  35926072 aatcgtgacacgatttcatcaacgtgtcacgatttcccaggcagtgagcatggtttgcagggtgctcaatcgtgtcacgagtttgagaaaacgtgacacg 35925973  T
Q  129 attttc 134  Q
    ||||||    
T  35925972 attttc 35925967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 36029674 - 36029530
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    |||||||||||||||||  ||  ||| |||||||||| |||||| || ||| |||| ||||||| | ||||||| ||||||||||| |||||||| ||||    
T  36029674 aatcgtgacacgattttatcaacgtgtcacgattttc-aggcagcgaacatggtttgcagggtgcttaatcgtgtcacgattttggaaaaacgtgacacg 36029576  T
Q  129 attttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||   |||||||   | |||||||||||||| ||||||||||    
T  36029575 attttcaaacttgctgggtacgttttcaggataaggttggtcgtac 36029530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 40734156 - 40734221
Alignment:
Q  69 gcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  40734156 gcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 40734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 40735087 - 40735152
Alignment:
Q  69 gcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  40735087 gcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 40735152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 1735837 - 1735914
Alignment:
Q  56 cacgattttctaggcagtgagcattg-ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||||||||| ||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  1735837 cacgattttc-aggcagtgagcatggcttttcagggtgctcaatcgtg-cacgattttgggaaaacgtgacacgattttc 1735914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 3393292 - 3393370
Alignment:
Q  95 caatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||||  |||| ||||||||||||| ||||||||||    
T  3393292 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataag-ttggtcgtac 3393370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 8370036 - 8370099
Alignment:
Q  71 agtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  8370036 agtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 8370099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 16264887 - 16264825
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  16264887 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 16264825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 39032060 - 39032165
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||||| |||||| |||||| |||| |||||||| ||||||||| |||||||||||||||| ||| |||    
T  39032060 aatcgtgacacgatttcatcaacgtgtcacgattttc-aggcagggagcatggtttctcagggtgctcaatcgtgtcacgattttgggaaaatgtgacac 39032158  T
Q  128 gattttc 134  Q
    |||||||    
T  39032159 gattttc 39032165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 30709301 - 30709405
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   ||  ||| ||| |||||| ||| ||||||||| |||| ||||||||||||||||| |||||||||| ||||||||| |||     
T  30709301 aatcgtgacacgatttcatcaacgtgtcacaattttc-aggtagtgagcatggtttgcagggtgttcaatcgtgtcacgattttgagaaaacgtgacaca 30709399  T
Q  129 attttc 134  Q
    ||||||    
T  30709400 attttc 30709405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 34795456 - 34795593
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| |||||||||| | | || |||||| ||| ||||||||| |||||  |||||||||||||  ||||||||||  ||  ||||||||||||  | ||    
T  34795456 cgtgacacgattttgcctgaatttgaacagtatataagcactctatgacttatttgttgggtaagtttggtgaatcctatgaaaaccaaaggagagatct 34795555  T
Q  282 tttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    |||||||| ||||||||||||| ||||| |||| ||||    
T  34795556 tttagggtatttagatactaaaggttgatggtcgttgg 34795593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 46860122 - 46860194
Alignment:
Q  247 cttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||| ||||||||| |||  |||||||||||| | ||||||||||| |||||||||||||||    
T  46860122 cttggtgaatctcatggaaaccaaatgagagaacttttagggtatgtagatactaaaggttgagggtctttgg 46860194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 16498748 - 16498799
Alignment:
Q  91 tgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgct 142  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  16498748 tgttcaatcgtgatacgattttgggaaaatgtgtcacgattttcggcttgct 16498799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 47923445 - 47923512
Alignment:
Q  67 aggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||||| |||| ||||||| ||||||||| |||  ||||||||||||||| ||||||||||    
T  47923445 aggcagtgagcatggtttgcagggtgctcaatcgtgtcacatttttgggaaaacgtgacacgattttc 47923512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 40845236 - 40845090
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    |||||||||||||||||  ||   || || |||||||||||||||||||||  |||| ||||||| |||||| ||    ||||||||||||||||| |||    
T  40845236 aatcgtgacacgattttatcaacatgtcatgattttctaggcagtgagcatgatttttcagggtgctcaatcatgttgagattttgggaaaacgtgacac 40845137  T
Q  128 gattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||  | ||||| ||| | |||| |||||||| ||||||||||    
T  40845136 gattttcaacgtgctggacacgttttttaggataaggttggtcgtac 40845090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 33386180 - 33386324
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttct-aggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||| |||||||| ||| ||||||||| | | || |||||| | |||| |||||||   |||||||||||||||||| | || |||| |||    
T  33386180 aatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgattttgtggaatcgtgacac 33386278  T
Q  128 gattttc-ggcttgctgaacaagttttcaggataagattggtcgta 172  Q
    |||||||   |||||||   |||||||||||||||| |||||||||    
T  33386279 gattttcaaacttgctggttaagttttcaggataaggttggtcgta 33386324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 44331938 - 44331885
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggctt 139  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||| |||||    
T  44331938 cagggtgtccaatcgtgacacgattttggaaaaacgtgacacgatttttggctt 44331885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 48438744 - 48438692
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||| |||| |||| |||||||||||| ||||||| ||||||||||    
T  48438744 ttttcagggtgctcaaccgtgtcacgattttggggaaacgtgacacgattttc 48438692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 39127191 - 39127286
Alignment:
Q  227 tgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttggtga 321  Q
    |||| ||||||||| |||| ||| ||||||||||| |||| ||| ||||  |||||||||||| |||| |||||||| |||  ||| |||||||||    
T  39127191 tgactcatttgttgagtaagcttagtgaatctcatggaaatcaacggagagaacttttagggtatttacatactaaaggtttggggcctttggtga 39127286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 54634752 - 54634786
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattt 63  Q
    |||||||||||||||||||||||||| ||||||||    
T  54634752 aatcgtgacacgattttggcattgtgacacgattt 54634786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 20937355 - 20937408
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctca 260  Q
    |||||||| ||||||| |  ||||||||| ||||||||| ||||||||||||||    
T  20937355 aacactatttaagcacccattgacccattagttgggtaagcttggtgaatctca 20937408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 37726095 - 37726058
Alignment:
Q  94 tcaatcgtgacacgattttgggaaaacgtggcacgatttt 133  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  37726095 tcaatcgtgacacgattt--ggaaaacgtggcacgatttt 37726058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 86 - 316
Target Start/End: Complemental strand, 46570235 - 46569993
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac------------ 173  Q
    |||||||  ||||||||||| ||||||||||||||||| ||| |||||||||||||||  ||| ||||||||||||| ||||||||||                
T  46570235 cagggtgcccaatcgtgacaagattttgggaaaacgtgacacaattttcggcttgctgggcaaattttcaggataaggttggtcgtactttgggtcgtac 46570136  T
Q  174 gcatcaaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaagg 273  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  46570135 gcatcaaacgtgtcacgattttgtctggatctgaacactatgtaagcacaccatgacccatttgttgggcaagcttggtgaatctcatggaaaccaaagg 46570036  T
Q  274 aggaaacttttagggttttagatactaaaagttgagggtcttt 316  Q
    ||| || |||||||||||||||||||||| ||||| |||||||    
T  46570035 agggaaattttagggttttagatactaaatgttgaaggtcttt 46569993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 67 - 318
Target Start/End: Original strand, 54882480 - 54882743
Alignment:
Q  67 aggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattg 166  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || ||| |||||||||||||| |||    
T  54882480 aggcagtgagcatggtttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgttggacacgttttcaggataaggttg 54882579  T
Q  167 ------------gtcgtacgcatcaaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtga 254  Q
                |||||||||| |||  ||| ||| |||||| ||||||||||||||||  || ||| ||  |||| |||||||||||||| ||| ||||    
T  54882580 atcgtaccttgggtcgtacgcaccaactgtgacacaattttgcccggatctgaacactacatatgcattctttgactcatttgttgggtaagcttagtga 54882679  T
Q  255 atctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  54882680 atctcatggaaaccaaaggagggaacttttagggttttagatactaaaggttgagggtctttgg 54882743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 96 - 318
Target Start/End: Complemental strand, 55086032 - 55085811
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataa-gattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| ||||   || | ||||||||||| | ||||||||||||||||| |||||||||||||    
T  55086032 aatcatgacacgattt-gggaaaacgtggcacgattttgggcatgcttggcacgctttcaggataaaggttggtcgtacgcatcaaccgtgtcacgattt 55085934  T
Q  195 tgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttag 294  Q
    || ||| |||||||| ||||  ||||| ||  ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  55085933 tgcccgaatctgaactctata-aagcattctttgacccatttgttgggtaagcttggtgaatctcaatgaaaccaaaggagggaacttttagggttttag 55085835  T
Q  295 atactaaaagttgagggtctttgg 318  Q
    |||||||| |||||||||||||||    
T  55085834 atactaaaggttgagggtctttgg 55085811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 26363852 - 26363988
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||    
T  26363852 cgtgacacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaagcttggtgaatctcatggaaaccaagggagggaact 26363951  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  26363952 tttagggttttagatactaaaggttgagggcctttgg 26363988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 27417532 - 27417396
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| ||||    
T  27417532 cgtgacacgattttgtccggatctaaacactatataagcactccatgacccatttgttgggtaagcttggtgaatctcatgaaaaccaaaggagggaact 27417433  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||||| |||||||||||||||    
T  27417432 tttagggttttagatactaaaggttgagggtctttgg 27417396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 40630571 - 40630707
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||||||||||||||||||  || || ||| ||  ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  40630571 cgtgacacgattttgtccggatctgaacataatatatgcattctttgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggatgaaact 40630670  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40630671 tttagggttttagatactaaaggttgagggtctttgg 40630707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 95 - 318
Target Start/End: Original strand, 2209188 - 2209431
Alignment:
Q  95 caatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||||   ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  2209188 caatcgtgacacgattttggggaaacgtgacacgattttcggtttgctaggcaagttttcaggataaggttggtcgtacgcaccaaacgcgtcacgattt 2209287  T
Q  195 --------------------tgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaagga 274  Q
                        |||| | |||||||||| || |||||| ||  ||||||||||||||||||| ||||||||||||||| |||| |||| ||    
T  2209288 gggaaatcgtgacaaaattttgtctgaatctgaacacaatataagcattctttgacccatttgttgggtaagcttggtgaatctcatggaaagcaaatga 2209387  T
Q  275 ggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    || |||||||||||||||||||||||||  ||||||||||||||    
T  2209388 gggaacttttagggttttagatactaaagattgagggtctttgg 2209431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 26363694 - 26363807
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttca 155  Q
    ||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26363694 cacgattttttaggcagtgaacattgtttttagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttca 26363793  T
Q  156 ggataagattggtc 169  Q
    ||||||| ||||||    
T  26363794 ggataaggttggtc 26363807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 6655543 - 6655679
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||||||||| ||||||||| || || ||| ||  ||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||    
T  6655543 cgtgacacgattttgtccggttctgaacacaatatatgcattctttgacccatttgttgggtaagcttggtaaatctcatggaaaccaaaggagggaact 6655642  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6655643 tttagggttttagatactaaaggttgagggtctttgg 6655679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 9927982 - 9927867
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttca 155  Q
    |||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  9927982 cacgattttctaggcagtgaacatgttttgcagggtgttcaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttca 9927883  T
Q  156 ggataagattggtcgt 171  Q
    ||||||| ||||||||    
T  9927882 ggataaggttggtcgt 9927867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 191 - 318
Target Start/End: Complemental strand, 50674418 - 50674291
Alignment:
Q  191 attttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggtt 290  Q
    ||||||||||||||||||||| || || ||| ||  ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  50674418 attttgtccggatctgaacacaatatatgcattctttgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagggaacttttagggtt 50674319  T
Q  291 ttagatactaaaagttgagggtctttgg 318  Q
    ||| |||||||| ||| |||||||||||    
T  50674318 ttaaatactaaatgttaagggtctttgg 50674291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 8653220 - 8653323
Alignment:
Q  216 taagcactccatgacccattt-gttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtct 314  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  8653220 taagcactccatgacccattttgttaggtaagcttggtgaatctcatggaaaccaaaggagagaacttttagggttttagatactaaaggttgagggtct 8653319  T
Q  315 ttgg 318  Q
    ||||    
T  8653320 ttgg 8653323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 8665027 - 8665130
Alignment:
Q  216 taagcactccatgacccattt-gttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtct 314  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  8665027 taagcactccatgacccattttgttaggtaagcttggtgaatctcatggaaaccaaaggagagaacttttagggttttagatactaaaggttgagggtct 8665126  T
Q  315 ttgg 318  Q
    ||||    
T  8665127 ttgg 8665130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 10071505 - 10071608
Alignment:
Q  216 taagcactccatgacccattt-gttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtct 314  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||| |||||||||||    
T  10071505 taagcactccatgacccattttgttgggtaatcttggtgaatctcatggaaatcaaaggagggaacttttaaggttttagatactaaaggttgagggtct 10071604  T
Q  315 ttgg 318  Q
    ||||    
T  10071605 ttgg 10071608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 12745965 - 12745820
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggca 126  Q
    ||||||||||||||||| |  |  ||| ||||||||||||||||||||||  |||||  |||||||| ||||||||||| ||||||||||||||||| ||    
T  12745965 gaatcgtgacacgatttagcaagcgtgacacgattttctaggcagtgagc--tgtttggcagggtgtccaatcgtgacatgattttgggaaaacgtgaca 12745868  T
Q  127 cgattttcggcttgctgaacaagtttt-caggataagattggtcgtac 173  Q
    |||||||||||||||||  |||||||| ||||||||| ||||||||||    
T  12745867 cgattttcggcttgctgggcaagttttccaggataaggttggtcgtac 12745820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 35661892 - 35662006
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacgcatca 179  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||  || |||||||||||||| ||||||||||||| ||    
T  35661892 tgttttctgagtgtccaatcgtgacacgattttgggaaaatgtgtcacgattttcggcttgttgggcacgttttcaggataaggttggtcgtacgcacca 35661991  T
Q  180 aacgtgtcacgattt 194  Q
    | |||||||||||||    
T  35661992 accgtgtcacgattt 35662006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 56179122 - 56179009
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtacgcatc 178  Q
    ||||||||||| || ||||||||||||||||||||||||||||| || |||||| |||||||||  |||| ||||||||||||| |||||||||||||||    
T  56179122 tgttttcagggcgtccaatcgtgacacgattttgggaaaacgtgacatgatttttggcttgctgggcaagattttcaggataaggttggtcgtacgcatc 56179023  T
Q  179 aaacgtgtcacgat 192  Q
    || |||| ||||||    
T  56179022 aatcgtgacacgat 56179009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 26176115 - 26176007
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacgcatcaaacgtg 185  Q
    |||||||  ||| |||||||| |||||||||||||||| |||||||||||||||| ||  ||||||||||||||||| ||||||||||||| ||||||||    
T  26176115 cagggtgcccaaccgtgacacaattttgggaaaacgtgacacgattttcggcttgatgggcaagttttcaggataaggttggtcgtacgcaccaaacgtg 26176016  T
Q  186 tcacgattt 194  Q
    ||| |||||    
T  26176015 tcatgattt 26176007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 50263279 - 50263143
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| |||||||||||| ||||||||||||  | |||||||||  ||||||||||||||   ||  ||||||||||||||  ||||||||||||| ||||    
T  50263279 cgtgacacgattttgtctggatctgaacacattataagcactctttgacccatttgttgaaaaagtttggtgaatctcatgaaaaccaaaggagggaact 50263180  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||| |||||| |||||| ||||||||    
T  50263179 tttagggttttagacactaaaggttgagagtctttgg 50263143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 52095859 - 52095764
Alignment:
Q  79 ttgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||  |||| ||||||||||||| ||||||||||    
T  52095859 ttgttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtac 52095764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 5370571 - 5370459
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtacgcatcaa 180  Q
    ||||||||| || |||||||||||||||||||||||| |||| ||||||||| |||||||||  ||||  |||||||||||| |||||||||||||||||    
T  5370571 ttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagactttcaggataaggttggtcgtacgcatcaa 5370472  T
Q  181 acgtgtcacgatt 193  Q
     |||| |||||||    
T  5370471 tcgtggcacgatt 5370459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 34570894 - 34570818
Alignment:
Q  97 atcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  34570894 atcgtgacacgattttgggaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggttgtac 34570818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 12740087 - 12739919
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggca 126  Q
    ||||||||||||||||| |  |  ||| |||||||||||||||| |||||  |||||| |||||||| ||| || |||||||||||||||||||||  ||    
T  12740087 gaatcgtgacacgatttagcaaacgtgtcacgattttctaggcactgagc--tgttttgcagggtgtccaaccgcgacacgattttgggaaaacgtaaca 12739990  T
Q  127 cgattttcggcttgctgaacaag-ttttcaggataagattggtcgtacgcatcaaacgtgtcacgattttg 196  Q
    | ||||| |||||||||  |||| ||||||||||||| ||||||||||||| ||| ||||| | |||||||    
T  12739989 caatttttggcttgctgggcaagtttttcaggataaggttggtcgtacgcaccaatcgtgttatgattttg 12739919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 12748293 - 12748125
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggca 126  Q
    ||||||||||||||||| |  |  ||| |||||||||||||||| |||||  |||||| |||||||| ||| || |||||||||||||||||||||  ||    
T  12748293 gaatcgtgacacgatttagcaaacgtgtcacgattttctaggcactgagc--tgttttgcagggtgtccaaccgcgacacgattttgggaaaacgtaaca 12748196  T
Q  127 cgattttcggcttgctgaacaag-ttttcaggataagattggtcgtacgcatcaaacgtgtcacgattttg 196  Q
    | ||||| |||||||||  |||| ||||||||||||| ||||||||||||| ||| ||||| | |||||||    
T  12748195 caatttttggcttgctgggcaagtttttcaggataaggttggtcgtacgcaccaatcgtgttatgattttg 12748125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 46703114 - 46703224
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttg 307  Q
    ||||||| ||| ||||| || ||||||||| || | |  ||||||||||||||| |||||||||||||  ||||||||||||||||||||||||| ||||    
T  46703114 acactatttaatcactctataacccatttgctgaggaggcttggtgaatctcatggaaaccaaaggagagaacttttagggttttagatactaaaggttg 46703213  T
Q  308 agggtctttgg 318  Q
    |||||||||||    
T  46703214 agggtctttgg 46703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 6655401 - 6655502
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  ||| |||||||| ||||||||||||||||||||| ||| ||| |||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  6655401 gtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacacgattttcggtttgctgggcaagttttcaggataaggttggtcgt 6655500  T
Q  172 ac 173  Q
    ||    
T  6655501 ac 6655502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 36314746 - 36314890
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||||| |||||| |||||| |||| ||||| || ||||||||| |||||||||||||||||||| |||    
T  36314746 aatcgtgacacgatttcatcaacgtgtcacgattttc-aggcagggagcatagtttctcaggatgctcaatcgtgtcacgattttgggaaaacgtgacac 36314844  T
Q  128 gattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||  |||||||  || |||||||||||||| ||||||||||    
T  36314845 gattttcaacttgctgggcacgttttcaggataaggttggtcgtac 36314890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 36328955 - 36329099
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||||| |||||| |||||| |||| ||||| || ||||||||| |||||||||||||||||||| |||    
T  36328955 aatcgtgacacgatttcatcaacgtgtcacgattttc-aggcagggagcatagtttctcaggatgctcaatcgtgtcacgattttgggaaaacgtgacac 36329053  T
Q  128 gattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||  |||||||  || |||||||||||||| ||||||||||    
T  36329054 gattttcaacttgctgggcacgttttcaggataaggttggtcgtac 36329099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 5429357 - 5429444
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||| ||||| || ||||||||||||| |||||||||||||||    
T  5429357 cagggtgtctaatcgtgacacgattttgggaaaacgtgatacgattttcagcttgttggacaagttttcaggttaagattggtcgtac 5429444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 12073045 - 12073116
Alignment:
Q  247 cttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  12073045 cttggtgaatctcatggaaaccaaaggatggaacttttagggttttagatactaaaggttgagggtctttgg 12073116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 22883309 - 22883206
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||||||| |||||||||| | |||||||||||| |||| ||||||||||||||| ||||||||| |||| || ||||||||| ||||||||||||| ||    
T  22883309 aacactatttaagcactccttaacccatttgttgagtaagcttggtgaatctcatggaaaccaaatgagggaaattttagggtatttagatactaaaggt 22883210  T
Q  306 tgag 309  Q
    ||||    
T  22883209 tgag 22883206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 22934973 - 22934870
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||||||| |||||||||| | |||||||||||| |||| ||||||||||||||| ||||||||| |||| || ||||||||| ||||||||||||| ||    
T  22934973 aacactatttaagcactccttaacccatttgttgagtaagcttggtgaatctcatggaaaccaaatgagggaaattttagggtatttagatactaaaggt 22934874  T
Q  306 tgag 309  Q
    ||||    
T  22934873 tgag 22934870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 41964029 - 41964140
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagtt 306  Q
    ||||||| ||||||||| |||||||||||| || | ||  |||||||||||||| |||| ||||||||| |||||||||||| | ||||||||||| |||    
T  41964029 acactatttaagcactctatgacccatttggtgagaaagtttggtgaatctcatggaaatcaaaggagggaacttttagggtatgtagatactaaaggtt 41964128  T
Q  307 gagggtctttgg 318  Q
    ||||||||||||    
T  41964129 gagggtctttgg 41964140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 25861548 - 25861693
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattg-ttttcagggtgttcaatcgtgacacgattttggg-aaaacgtggca 126  Q
    ||||||||||||||||   ||  ||| |||||||| | ||||||||||||| | ||||||||||| ||||||||| |||||||||||| |||||||| ||    
T  25861548 aatcgtgacacgatttcatcaacgtgtcacgatttcc-aggcagtgagcatggcttttcagggtgctcaatcgtgtcacgattttgggaaaaacgtgaca 25861646  T
Q  127 cgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||  |||||||  || |||||||||||||| ||||||||||    
T  25861647 cgattttcaacttgctgggcatgttttcaggataaggttggtcgtac 25861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 16628388 - 16628492
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   || |||| |||||||||| |||||||||||||  ||| ||||||| ||||||||| |||||||||||||||||||| ||||    
T  16628388 aatcgtgacacgatttcatcaatgtgtcacgattttc-aggcagtgagcatgctttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacg 16628486  T
Q  129 attttc 134  Q
    ||||||    
T  16628487 attttc 16628492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 37740312 - 37740390
Alignment:
Q  95 caatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| ||||||||||||||||||||| || |||||||||||||| |  ||||||||||||||||| ||||||||||    
T  37740312 caatcgtaacacgattttgggaaaacgtgacatgattttcggcttgcagggcaagttttcaggataaggttggtcgtac 37740390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 41639157 - 41639215
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaa 245  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  41639157 cacgattttgtctggatctgaacactatgtaagcacttcatgacccatttgttgggtaa 41639215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 41639028 - 41639111
Alignment:
Q  90 gtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||  |||| ||  || |||||||||||||| ||||||||||    
T  41639028 gtgttcaatcgtgacacgattttggaaaaacgtgacacgattttcaacttgttgggcacgttttcaggataaggttggtcgtac 41639111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 3778103 - 3778025
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||||||||| | |||| |||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  3778103 cacgattttccaagcagcgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 3778025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 10047893 - 10047780
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc-ggcttgctgaacaagttttcaggataagattggtcgtacgcatcaa 180  Q
    ||||||||||| |||| |||| |||||||||||||||||||| |||||||| |   |||| ||   | |||||||||||||| ||||||||||||| |||    
T  10047893 ttttcagggtgctcaaccgtgtcacgattttgggaaaacgtgacacgatttgcaaacttgatgggtacgttttcaggataaggttggtcgtacgcaccaa 10047794  T
Q  181 acgtgtcacgattt 194  Q
     |||||||||||||    
T  10047793 tcgtgtcacgattt 10047780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 33989501 - 33989586
Alignment:
Q  234 tttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||||||||| || ||||||||||||||| |||||||||| ||  |||||||||||| |||||||||||||  ||||||||||||||    
T  33989501 tttgttgggcaagcttggtgaatctcatggaaaccaaagcagataacttttagggtatttagatactaaagtttgagggtctttgg 33989586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 35370874 - 35370782
Alignment:
Q  227 tgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    |||||||| | ||| |||| |||| |||||||||| |||| ||||||||| |||||||| ||| ||||||||||||| |||||||||||||||    
T  35370874 tgacccatctattgagtaagcttgatgaatctcatggaaatcaaaggagggaacttttaaggtatttagatactaaaggttgagggtctttgg 35370782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 27417656 - 27417573
Alignment:
Q  90 gtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||| |   || | |||||||||||| ||||||||||    
T  27417656 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcaacttgttcggcacggtttcaggataaggttggtcgtac 27417573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 35662091 - 35662165
Alignment:
Q  244 aaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||||| || |||||| |||  |||||||||| |||||||||||||| |||||| ||||||||    
T  35662091 aaacttggtgaatctcatggacaccaaatgagagaacttttaggattttagatactaaaggttgagagtctttgg 35662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 5268768 - 5268820
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  5268768 ttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 5268820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 40630447 - 40630530
Alignment:
Q  90 gtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| |||||||| |||||||||||||||||||| |||||||||| |||||||   ||  ||||||| ||||| ||||||||||    
T  40630447 gtgtccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgctaggcacattttcagaataaggttggtcgtac 40630530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 50674551 - 50674468
Alignment:
Q  90 gtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| ||||||||  ||||||||||||||||||| || ||||||| ||||||||  || |||||||||||||| ||||| ||||    
T  50674551 gtgtccaatcgtgttacgattttgggaaaacgtgacatgattttcagcttgctgggcacgttttcaggataaggttggttgtac 50674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 54867707 - 54867616
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||| || ||||||||| ||| |||||||||||||||| ||||||||||  |||||||  || |||||  ||||||| ||||||||||    
T  54867707 ttttcaggatgctcaatcgtgtcacaattttgggaaaacgtgacacgattttcaacttgctgggcacgtttttcggataaggttggtcgtac 54867616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 8689079 - 8689157
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||   | |||||||||||||| ||||||||||    
T  8689079 aatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtac 8689157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 35369971 - 35369884
Alignment:
Q  227 tgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||| ||||| |||| |||| |||||||||| ||||  |||||||| ||||||||    ||||||||||||| |||||||||||||||    
T  35369971 tgacccatctgttgagtaagcttgatgaatctcatggaaattaaaggagggaactttta----tttagatactaaaggttgagggtctttgg 35369884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 379030 - 379102
Alignment:
Q  247 cttggtgaatctcattgaaaccaaaggaggaaacttttagggttt-tagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||| | |||||||||||||  |||||||||| ||| ||||||||||| |||||||| ||||||    
T  379030 cttggtgaatctcgtggaaaccaaaggagagaacttttaggatttgtagatactaaaggttgagggactttgg 379102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 3785702 - 3785782
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagg 287  Q
    |||||||| |||||||| | |||||||||||||| ||||  |||||| ||||||| |||| ||||||| | ||||||||||    
T  3785702 aacactatttaagcactacttgacccatttgttgagtaagtttggtggatctcatggaaatcaaaggatggaacttttagg 3785782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 6742984 - 6743075
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||   ||||||| |||| ||||||||||||||| |||||||||   |||| ||  || |||||||||||||| ||||||||||    
T  6742984 ttttcagggtgcctaatcgtggcacgtttttgggaaaacgtgacacgattttaaacttgttgggcacgttttcaggataaggttggtcgtac 6743075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 38811590 - 38811523
Alignment:
Q  252 tgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    |||||||||| ||||| |||||||| ||||||||||||  |||||||||||| ||||||||| |||||    
T  38811590 tgaatctcatggaaactaaaggagggaacttttagggtacttagatactaaaggttgagggtatttgg 38811523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 36994231 - 36994293
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgct 142  Q
    ||||||| | |||| |||||||||||| ||||| |||||||||| ||| ||||||||||||||    
T  36994231 tgttttctgagtgtccaatcgtgacacaatttttggaaaacgtgtcacaattttcggcttgct 36994293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 16622809 - 16622913
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   ||  ||| |||||||||| ||| ||||||||| |||| ||  ||| ||||| ||| ||| |||||||||||||||| ||||    
T  16622809 aatcgtgacacgatttcatcaacgtgtcacgattttc-aggtagtgagcatggtttgcattgtgctcaattgtgtcacaattttgggaaaacgtgacacg 16622907  T
Q  129 attttc 134  Q
    ||||||    
T  16622908 attttc 16622913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 54200363 - 54200310
Alignment:
Q  120 cgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| |||||||||||||||||||  |||||||||| |||||| ||||||||||    
T  54200363 cgtgacacgattttcggcttgctgggcaagttttcaagataaggttggtcgtac 54200310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 26699979 - 26699891
Alignment:
Q  232 catttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttaggg-ttttagatactaaaagttgagggtctttggt 319  Q
    ||||||||| | || ||| ||||||||||| ||||||||| |||| ||||| |||||  ||||||||||||| ||||| | ||||||||    
T  26699979 catttgttgagcaagctttgtgaatctcatggaaaccaaatgagggaacttgtagggcatttagatactaaaggttgaagatctttggt 26699891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 48142794 - 48142838
Alignment:
Q  150 ttttcaggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||    
T  48142794 ttttcaggataaggttggtcgtacgcatcaatcgtgacacgattt 48142838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 50263383 - 50263319
Alignment:
Q  109 ttttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||  |||||||||||||||| ||   |||||||||| ||||| ||||||||||    
T  50263383 ttttgggaaaacgtaacacgattttcggcttggtgggtaagttttcagaataaggttggtcgtac 50263319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 5396245 - 5396311
Alignment:
Q  69 gcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||| |||||| |||| ||||| || ||||||||| ||||||||||| |||||||| ||||||||||    
T  5396245 gcagggagcatggtttctcaggttgctcaatcgtgtcacgattttggaaaaacgtgacacgattttc 5396311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 13992769 - 13992731
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  13992769 aatcgtgacacgattttgggaaatcgtgacacgattttc 13992731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 38151985 - 38152057
Alignment:
Q  62 tttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||| |||||||||| |  |||| ||||||| ||||||||| ||| | |||||||||||||| ||| ||||||    
T  38151985 tttccaggcagtgagtacggtttgcagggtgctcaatcgtgtcacaaatttgggaaaacgtgacacaattttc 38152057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 56141715 - 56141751
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattt 132  Q
    |||||||||||||| |||||||| |||||||||||||    
T  56141715 aatcgtgacacgatcttgggaaatcgtggcacgattt 56141751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 52 - 318
Target Start/End: Original strand, 2389717 - 2390005
Alignment:
Q  52 gtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagtt 151  Q
    ||||||||||||||||| |||||||||| ||||| ||||||| ||||||||||||||||||| ||||| ||| |||||||||| ||||||||   | |||    
T  2389717 gtggcacgattttctagacagtgagcatggtttttagggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcagcttgctgggaacgtt 2389816  T
Q  152 ttcaggataagattgg------------tcgtacgcatcaaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgtt 239  Q
    ||||||||||| ||||            |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||||||    
T  2389817 ttcaggataaggttggtcgtaccttggatcgtacacaccaaacgtgtcacgattttgtccggatctgaacacaatgtaagcattctttgacccatttgtt 2389916  T
Q  240 g----------ggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |             |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2389917 gaaaaaaaaaaaaaaaacttggtgaatctcatggaaaccaaaggaggaaacttttagggttttagatactaaaggttgagggtctttgg 2390005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 96 - 318
Target Start/End: Complemental strand, 2361639 - 2361416
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgatttt-cggcttgctgaacaagttttcaggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    |||||||||||||||||||| ||||||| ||| ||||| ||  |||||| |||| |||| |||||||| ||||||||| ||| |||||||||||||||||    
T  2361639 aatcgtgacacgattttggggaaacgtgacacaatttttcgatttgctggacaaatttttaggataaggttggtcgtatgcaccaaacgtgtcacgattt 2361540  T
Q  195 tgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttag 294  Q
    ||||| |||||||||||  | |||||| ||  |||||||||||||||| || ||| ||||||||||| |||||||||||||| |||||||||| ||||||    
T  2361539 tgtccagatctgaacacattataagcattctttgacccatttgttgggcaagcttagtgaatctcatggaaaccaaaggagggaacttttaggattttag 2361440  T
Q  295 atactaaaagttgagggtctttgg 318  Q
    ||||||||  ||||||||||||||    
T  2361439 atactaaagattgagggtctttgg 2361416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 32358412 - 32358281
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||| |||||||||||||| |||||||||    
T  32358412 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgaaaaagcttggtgaatctcatggaaaccaaaggagggaacttttag 32358313  T
Q  287 ggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||| |||||||||||||||    
T  32358312 ggttttagatactaaaggttgagggtctttgg 32358281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 14070383 - 14070237
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  14070383 gaatcgtgacacgattttggcatcgtggcacgattttcaaggcagtgagcatggttttcagggtgttcaatcgtgacacgattttgggaaaacgtgacac 14070284  T
Q  128 gattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||| ||||||   |||| |||||| |||||| ||||||||||    
T  14070283 gattttcgacttgctaggcaagtttttcaagataaggttggtcgtac 14070237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 14380411 - 14380265
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  14380411 gaatcgtgacacgattttggcatcgtggcacgattttcaaggcagtgagcatggttttcagggtgttcaatcgtgacacgattttgggaaaacgtgacac 14380312  T
Q  128 gattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||| ||||||   |||| |||||| |||||| ||||||||||    
T  14380311 gattttcgacttgctaggcaagtttttcaagataaggttggtcgtac 14380265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 47676658 - 47676540
Alignment:
Q  56 cacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  47676658 cacgattttctaggcagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttc 47676559  T
Q  155 aggataagattggtcgtac 173  Q
    |||||||| ||||||||||    
T  47676558 aggataaggttggtcgtac 47676540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 6360488 - 6360357
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    |||||||||||||||||||||||||  | |||||| ||  ||||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||    
T  6360488 cacgattttgtccggatctgaacacattataagcattctttgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagagaacttttag 6360389  T
Q  287 ggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||| |||| |||||||||||||||    
T  6360388 ggttttagatattaaaggttgagggtctttgg 6360357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 47674465 - 47674347
Alignment:
Q  56 cacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    |||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  47674465 cacgattttccaggcagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttc 47674366  T
Q  155 aggataagattggtcgtac 173  Q
    |||||||| ||||||||||    
T  47674365 aggataaggttggtcgtac 47674347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 86 - 318
Target Start/End: Original strand, 29608211 - 29608464
Alignment:
Q  86 cagggtgttcaatcgtgacacgatttt-gggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacgcatcaaacgt 184  Q
    |||||||| |||||||||||||||||| ||| ||| |||  || ||||||| |||| ||  ||||||||||||||||| ||||||||||||| |||||||    
T  29608211 cagggtgtccaatcgtgacacgatttttggggaaaagtgatacaattttcgacttgttgggcaagttttcaggataaggttggtcgtacgcaccaaacgt 29608310  T
Q  185 gtcac--------------------gattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattga 264  Q
    |||||                    |||||||||||||||||||||| || |||||| ||  |||||||| |||||   || ||||||||||||||| ||    
T  29608311 gtcacaatttaggaaatcatgacacgattttgtccggatctgaacacaatataagcattctttgacccatatgttgataaagcttggtgaatctcatgga 29608410  T
Q  265 aaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  29608411 aaccaaaggagggaacttttagggttttagatactaaaggttgagggtctttgg 29608464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 191 - 318
Target Start/End: Complemental strand, 48599896 - 48599769
Alignment:
Q  191 attttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggtt 290  Q
    |||||||||| |||||||||| || || ||| ||  | ||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  48599896 attttgtccgaatctgaacacaatatatgcattcttttacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagggaacttttagggtt 48599797  T
Q  291 ttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||| |||||||||||||||    
T  48599796 ttagatactaaaggttgagggtctttgg 48599769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 6431592 - 6431694
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  6431592 taagcgctccatgacccatttattgggtaagcttggtgaatctcatagaaaccaaaggagggaacttttagggttttagatactaaaggttgagggtctt 6431691  T
Q  316 tgg 318  Q
    |||    
T  6431692 tgg 6431694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 4512936 - 4512834
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  4512936 taagcactccatgacccatttaatgggtaagcttggtgaatctcatggaaaccaaaggagggaacttttagggttttagattctaaaggttgagggtctt 4512837  T
Q  316 tgg 318  Q
    |||    
T  4512836 tgg 4512834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 30814397 - 30814488
Alignment:
Q  227 tgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  30814397 tgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagggaacttttagggttttagatacttaaggttgagggtctttgg 30814488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 4509244 - 4509142
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    ||||||||| |||||||||||||||||||| |||||| |||||||| |||||||||||| | ||||||||||||||||||||||||| ||||||||| ||    
T  4509244 taagcactctatgacccatttgttgggtaagcttggttaatctcatggaaaccaaaggatggaacttttagggttttagatactaaaggttgagggtttt 4509145  T
Q  316 tgg 318  Q
    |||    
T  4509144 tgg 4509142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 4511086 - 4510984
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    ||||||||| |||||||||||||||||||| |||||| |||||||| |||||||||||| | ||||||||||||||||||||||||| ||||||||| ||    
T  4511086 taagcactctatgacccatttgttgggtaagcttggttaatctcatggaaaccaaaggatggaacttttagggttttagatactaaaggttgagggtttt 4510987  T
Q  316 tgg 318  Q
    |||    
T  4510986 tgg 4510984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 27347570 - 27347687
Alignment:
Q  56 cacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    ||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||| || || ||||||||||||||||  |||||||||    
T  27347570 cacgattttctaggcagtgagcactgttttgcagggtgcccaatcgtgacacgattttgggaaaac-tgacatgattttcggcttgctgggcaagttttc 27347668  T
Q  155 aggataagattggtcgtac 173  Q
    |||||||| ||||||||||    
T  27347669 aggataaggttggtcgtac 27347687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 22269583 - 22269698
Alignment:
Q  204 ctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaa 302  Q
    ||||||||||| |||||||| |||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| |||||||| | |||||||||||    
T  22269583 ctgaacactatttaagcacttcatgacccatttgttgggcaagcttggtgaatctcatggaaaccaaaggagggaacatttagggtatgtagatactaaa 22269682  T
Q  303 agttgagggtctttgg 318  Q
      ||||||||||||||    
T  22269683 gtttgagggtctttgg 22269698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 32358575 - 32358470
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttca 155  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||| ||| |||||| ||||||||  || |||||||    
T  32358575 cacgattttctaggcagtgagcatggttttcagggtatccaatcgtgatacgattttgggaaaacgtgacacaattttcagcttgctgggcacgttttca 32358476  T
Q  156 ggataa 161  Q
    ||||||    
T  32358475 ggataa 32358470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 23554710 - 23554804
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||  |||| ||||||||||||| ||||||||||    
T  23554710 tgttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtac 23554804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 3258608 - 3258719
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagtt 306  Q
    ||||||| ||||||||| |||||||||||| ||   |||||||||||||||||| ||||||| |||||| |||||||||||| | ||||||||||| |||    
T  3258608 acactatttaagcactctatgacccatttggtgaaaaaacttggtgaatctcatggaaaccagaggagggaacttttagggtatgtagatactaaaggtt 3258707  T
Q  307 gagggtctttgg 318  Q
    ||||||||||||    
T  3258708 gagggtctttgg 3258719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 4585803 - 4585925
Alignment:
Q  51 tgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagt 150  Q
    |||| ||||||||||||||||||||||||  ||| |||||||| |||||||||||| |||||||||||||||| || |||||| |||||| ||   ||||    
T  4585803 tgtgtcacgattttctaggcagtgagcatgttttgcagggtgtccaatcgtgacactattttgggaaaacgtgacaagatttttggcttgttgggtaagt 4585902  T
Q  151 tttcaggataagattggtcgtac 173  Q
    |||||  ||||| ||||||||||    
T  4585903 tttcaatataaggttggtcgtac 4585925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 34311264 - 34311161
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtct 314  Q
    |||| ||||||||||| |||| |||||||| ||||||||||||||| |||||||||||| | |||||||||||| | ||||||||||| ||||||||||     
T  34311264 taagtactccatgaccaattttttgggtaagcttggtgaatctcatggaaaccaaaggaaggaacttttagggtatgtagatactaaaggttgagggtcc 34311165  T
Q  315 ttgg 318  Q
    ||||    
T  34311164 ttgg 34311161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 4539032 - 4538955
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||||| ||| ||||||||||    
T  4539032 aatcgtgacacgattttgggaaaacgtgacacgattttcggtttgctaagcaagttttcaggacaaggttggtcgtac 4538955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 173
Target Start/End: Original strand, 18126294 - 18126408
Alignment:
Q  59 gattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcagg 157  Q
    ||||||||||| |||||| || ||||| |||||||| |||||||| ||||||||||| ||||||||  ||||||||||||||| ||  ||||||||||||    
T  18126294 gattttctaggtagtgagtatggttttgcagggtgtccaatcgtg-cacgattttggaaaaacgtgatacgattttcggcttgttgggcaagttttcagg 18126392  T
Q  158 ataagattggtcgtac 173  Q
    ||||  ||||||||||    
T  18126393 ataatgttggtcgtac 18126408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 19495640 - 19495735
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacga-ttttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||||||| |||||||||||| |||||||||||||||| ||||| |||| |||||||||  |||| ||||||||||||| ||||||||||    
T  19495640 tgttttcagggtgtccaatcgtgacacaattttgggaaaacgtgccacgattttttggcttgctgggcaagattttcaggataaggttggtcgtac 19495735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 30814249 - 30814312
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggc 70  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||    
T  30814249 tttggtgtttggaaaatgttggaatcgtgacacgattttggaatcgtggcacgattttcaaggc 30814312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 31733420 - 31733333
Alignment:
Q  107 gattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    |||||| || ||||||| ||| |||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  31733420 gattttagggaaacgtgacacaattttcggcttgctgggcaagttttcaggataaggttggtcgtacgcaccaaacgtgtaacgattt 31733333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 22328931 - 22328842
Alignment:
Q  232 catttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttggtg 320  Q
    ||||||||  |||| ||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  22328931 catttgttaagtaagcttagtgaatctcatggaaaccaaaggagaaaacttttagggtatttagatactaaaggttgaggatctttggtg 22328842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 43863932 - 43864025
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| | |||| ||||||||||||||||||||||||||||| |||||||||||| ||| |    |||||||||||||||| ||||||||||    
T  43863932 tgttttccgagtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggtttgttaggaaagttttcaggataaggttggtcgtac 43864025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 6360621 - 6360535
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgta 172  Q
    |||||||  |||| |||||||||||||||| ||||||| |||||||||||||||| ||  ||||||||||||||||  |||||||||    
T  6360621 cagggtgcccaattgtgacacgattttggggaaacgtgacacgattttcggcttgttgggcaagttttcaggataatgttggtcgta 6360535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 33331992 - 33332110
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttc-agggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    ||||||||| |||||||||||||| |||||  |||||| ||||| ||| ||||||||||| |||||||| ||||||||||  |||||||  ||  |||||    
T  33331992 cacgattttttaggcagtgagcatggttttttagggtgctcaattgtgtcacgattttggaaaaacgtgacacgattttcaacttgctgggcacattttc 33332091  T
Q  155 aggataagattggtcgtac 173  Q
    | |||||| ||||||||||    
T  33332092 aagataaggttggtcgtac 33332110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 49092252 - 49092167
Alignment:
Q  49 attgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcg 135  Q
    |||||| |||||||||| || |||||||||| |||| ||||||| ||||||||| |||||||||||||||| ||| |||||||||||    
T  49092252 attgtgacacgattttc-agacagtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcg 49092167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 4178446 - 4178539
Alignment:
Q  81 gttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||| || |||||||||||||||||||||||| |||| ||||||||| |||||| |   |||| ||||||||||||| ||||||||||    
T  4178446 gttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttaggcaagattttcaggataaggttggtcgtac 4178539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 34311369 - 34311285
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgatttt 112  Q
    ||||||||||||||||| |  |  ||| |||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||    
T  34311369 gaatcgtgacacgatttggcaaacgtgtcacgattttctaggcagtgagcatggtttgcagggtgtccaatcatgacacgatttt 34311285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 2647266 - 2647357
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| |||||| | ||||||| |||||||||||||||||||| || |||||||  |||||||  || |||||||||||||| ||||||||||    
T  2647266 ttttgagggtgcttaatcgtgtcacgattttgggaaaacgtgacatgattttcaacttgctgggcacgttttcaggataaggttggtcgtac 2647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 4796242 - 4796329
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||  |||| ||  || ||||||||||||   ||||||||||    
T  4796242 cagggtgctcaatcgtgacacgattttggaaaaacgtgacacgattttcaacttgatgggcacgttttcaggatagagttggtcgtac 4796329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 48489107 - 48489190
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtc 169  Q
    |||||||||||| ||||||||||||| ||||||||||| |||| |||| |||||||||  || | || ||||||||| ||||||    
T  48489107 cagggtgttcaaccgtgacacgatttagggaaaacgtgacacggtttttggcttgctgggcatgcttccaggataaggttggtc 48489190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 2479913 - 2479772
Alignment:
Q  33 gtgacacgattttggcattgtggcacgattttct-aggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgatt 131  Q
    |||||||||||||||||| ||| ||||||||||| | || |||||| | |||| ||||||||  ||||||| |||||||||| |||| |||  |||||||    
T  2479913 gtgacacgattttggcatcgtgacacgattttctaatgccgtgagc-tggtttgcagggtgtcaaatcgtgtcacgattttgtgaaatcgttacacgatt 2479815  T
Q  132 ttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||   |||| ||   |||||||||||||||| ||||||||||    
T  2479814 ttcaaacttgttggttaagttttcaggataaggttggtcgtac 2479772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 2761759 - 2761706
Alignment:
Q  120 cgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  2761759 cgtgacacgattttcagcttgctgggcaagttttcaggataagattggtcgtac 2761706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 26416984 - 26417077
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| | |||| |||| |||||||||||||||| ||| ||| |||||||||  | ||| || ||||||||||||| |||| ||||||||||    
T  26416984 tgttttctgagtgtccaattgtgacacgattttggggaaatgtgacacgatttttagtttgttggacaagttttcagggtaaggttggtcgtac 26417077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 30026482 - 30026404
Alignment:
Q  94 tcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||| ||||||||| ||||||| |||||||||| |||||| |  || | |||||||||||| ||||||||||    
T  30026482 tcaatcgtgacatgattttggggaaacgtgacacgattttcagcttgccgggcacg-tttcaggataaggttggtcgtac 30026404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 48599987 - 48599932
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgc 141  Q
    |||||||  |||||||||||||||| |||| ||||||| |||||||||||||||||    
T  48599987 cagggtgcacaatcgtgacacgattatggggaaacgtgacacgattttcggcttgc 48599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 5116290 - 5116356
Alignment:
Q  251 gtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtcttt 316  Q
    ||||||||||| || |||||||||||  ||||||||||| |||| |||||||| |||||||||||||    
T  5116290 gtgaatctcatggataccaaaggaggggacttttagggtatttaaatactaaaggttgagggtcttt 5116356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 4509380 - 4509323
Alignment:
Q  18 gaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtga 75  Q
    |||| ||||||||||||||||||||||||| || ||| |||||||||| |||| ||||    
T  4509380 gaaagtgttggaatcgtgacacgattttgggatcgtgacacgattttcaaggccgtga 4509323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 4511222 - 4511165
Alignment:
Q  18 gaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtga 75  Q
    |||| ||||||||||||||||||||||||| || ||| |||||||||| |||| ||||    
T  4511222 gaaagtgttggaatcgtgacacgattttgggatcgtgacacgattttcaaggccgtga 4511165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 6431456 - 6431513
Alignment:
Q  18 gaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtga 75  Q
    |||| ||||||||||||||||||||||||| || ||| |||||||||| |||| ||||    
T  6431456 gaaagtgttggaatcgtgacacgattttgggatcgtgacacgattttcaaggccgtga 6431513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 25767436 - 25767398
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  25767436 aatcgtgacacgattttgggaaatcgtgacacgattttc 25767398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 31109112 - 31109146
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattt 63  Q
    |||||||||||||||||||||| ||||||||||||    
T  31109112 aatcgtgacacgattttggcatcgtggcacgattt 31109146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 35961495 - 35961457
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaac 120  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  35961495 ttttcagggtgctcaatcgtgtcacgattttgggaaaac 35961457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 79938 - 79867
Alignment:
Q  62 tttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||| ||||||||||||| |||| |||| || ||||||||| ||||||||||| |||| ||| || |||||||    
T  79938 tttccaggcagtgagcatggtttgcagg-tgctcaatcgtgtcacgattttggaaaaatgtgacaagattttc 79867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 12397302 - 12397266
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattt 132  Q
    |||||||||||||||| |||||| |||||||||||||    
T  12397302 aatcgtgacacgatttggggaaatcgtggcacgattt 12397266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 12406654 - 12406618
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattt 132  Q
    |||||||||||||||| |||||| |||||||||||||    
T  12406654 aatcgtgacacgatttggggaaatcgtggcacgattt 12406618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 6e-59; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 86 - 318
Target Start/End: Original strand, 11348178 - 11348421
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac------------ 173  Q
    ||||||||  |||||||||||||||||||  ||||||| |||||||||||||||| ||  ||||||||||||||||| ||||||||||                
T  11348178 cagggtgtctaatcgtgacacgattttggagaaacgtgacacgattttcggcttgttgggcaagttttcaggataaggttggtcgtacattggatcgtac 11348277  T
Q  174 gcatcaaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaagg 273  Q
    ||| ||||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  11348278 gcaccaaacgtgtcacgattttgtc-ggatctaaacactatataagtactccatgacccatttgttgggtaagcttagtgaatctcatggaaaccaaagg 11348376  T
Q  274 aggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    | | ||||||||||||||||||||||||  |||||||||||||||    
T  11348377 atggaacttttagggttttagatactaagggttgagggtctttgg 11348421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 29135819 - 29135970
Alignment:
Q  166 ggtcgtacgcatcaaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaa 265  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| || |||||| ||  |||||||||||||| |||| ||||||||||||||| |||    
T  29135819 ggtcgtacgcaccaaacgtgtcacgattttgtccggatctgaacacaatataagcattctttgacccatttgttgagtaagcttggtgaatctcatggaa 29135918  T
Q  266 accaaaggaggaaacttttagggttttagatactaaaagttgagggtctttg 317  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29135919 accaaaggagggaacttttagggttttagatactaaaggttgagggtctttg 29135970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 86 - 318
Target Start/End: Complemental strand, 37879600 - 37879356
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac------------ 173  Q
    ||||||| ||||||||||||||||||||| |||| ||| |||||||||| |||| ||| ||||||||| |||||||| ||||||||||                
T  37879600 cagggtgctcaatcgtgacacgattttggaaaaatgtgacacgattttcagcttactggacaagtttttaggataaggttggtcgtaccttgggtcgcac 37879501  T
Q  174 gcatcaaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaagg 273  Q
    ||| ||||| |||||||||||||||||||||||||||| || || ||| ||  ||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  37879500 gcaccaaacatgtcacgattttgtccggatctgaacacaatatatgcattctttgacccatttgttgggtaagcttggtgaatctcatggaaatcaaagg 37879401  T
Q  274 aggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    | | |||| |||||||||||||||||||| ||||||| |||||||    
T  37879400 aaggaactgttagggttttagatactaaatgttgaggatctttgg 37879356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 47255894 - 47255779
Alignment:
Q  203 tctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaa 302  Q
    |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  47255894 tctgaacactatttaagcacttcatgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagggaacttttagggttttagatactaaa 47255795  T
Q  303 agttgagggtctttgg 318  Q
     |||||||||||||||    
T  47255794 ggttgagggtctttgg 47255779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 182 - 316
Target Start/End: Original strand, 193199 - 193333
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||||||||||||||||||| || |||| | ||  ||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||    
T  193199 cgtgacacgattttgtccggatctgaacacaatataagtattctttgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagataact 193298  T
Q  282 tttagggttttagatactaaaagttgagggtcttt 316  Q
    |||||||||||||||| |||| |||||||||||||    
T  193299 tttagggttttagatattaaaggttgagggtcttt 193333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 19754112 - 19754214
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||    
T  19754112 taagcactccatgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagggaacttttagggttctagatactaaaggttaagggtctt 19754211  T
Q  316 tgg 318  Q
    |||    
T  19754212 tgg 19754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 179 - 318
Target Start/End: Original strand, 19752270 - 19752409
Alignment:
Q  179 aaacgtgtcacgattttgtccggatctgaa-cactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggagga 277  Q
    ||||||| |||||||||| | ||||||||| |||  | |||||||||||||||||||||||||||||| |||||||||||||||  |||||||| ||||     
T  19752270 aaacgtgacacgattttgac-ggatctgaaacacgttttaagcactccatgacccatttgttgggtaagcttggtgaatctcatgaaaaccaaatgaggg 19752368  T
Q  278 aacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    || |||||||||||||||||||||| ||||| |||||||||    
T  19752369 aatttttagggttttagatactaaaggttgaaggtctttgg 19752409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 34602894 - 34602784
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttg 307  Q
    ||||||| ||||||||| ||||||||||||||||  || ||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||    
T  34602894 acactatttaagcactctatgacccatttgttggaaaagcttggtgaatctcatggaaaccaaaggagggaacttttagggttttagatattaaaggttg 34602795  T
Q  308 agggtctttgg 318  Q
    | |||||||||    
T  34602794 aaggtctttgg 34602784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 34603189 - 34603299
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttg 307  Q
    ||||||| ||||||||| ||||||||||||||||  || ||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||    
T  34603189 acactatttaagcactctatgacccatttgttggaaaagcttggtgaatctcatggaaaccaaaggagggaacttttagggttttagatattaaaggttg 34603288  T
Q  308 agggtctttgg 318  Q
    | |||||||||    
T  34603289 aaggtctttgg 34603299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 13547665 - 13547534
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    |||||||||  ||||||||||||||||  || ||| |   ||||||||||||| ||||| ||||||||||||||| |||||||||||||  |||||||||    
T  13547665 cacgattttacccggatctgaacactacatatgcattttttgacccatttgtttggtaagcttggtgaatctcatggaaaccaaaggagagaacttttag 13547566  T
Q  287 ggttttagatactaaaagttgagggtctttgg 318  Q
     ||||||||||||||| |||||||||||||||    
T  13547565 agttttagatactaaaggttgagggtctttgg 13547534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 13549576 - 13549445
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    |||||||||  ||||||||||||||||  || ||| |   ||||||||||||| ||||| ||||||||||||||| |||||||||||||  |||||||||    
T  13549576 cacgattttacccggatctgaacactacatatgcattttttgacccatttgtttggtaagcttggtgaatctcatggaaaccaaaggagagaacttttag 13549477  T
Q  287 ggttttagatactaaaagttgagggtctttgg 318  Q
     ||||||||||||||| |||||||||||||||    
T  13549476 agttttagatactaaaggttgagggtctttgg 13549445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 37033650 - 37033518
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||  |||||| ||||||| |||| || |||||||||||| |||||||||||||| ||||    
T  37033650 cgtgacacaattttgtccggatctgaacacaatataagcattctttgacccttttgttgagtaagctgggtgaatctcatggaaaccaaaggagggaact 37033551  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||    ||||||| |||||||||||||||    
T  37033550 tttagggttt----tactaaaggttgagggtctttgg 37033518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 7482786 - 7482676
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttg 307  Q
    ||||||| ||||||| | |||||||||||  ||  |||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||    
T  7482786 acactatttaagcacactatgacccatttagtgaataagtttggtgaatctcatggaaaccaaaggaggaaacttttagggttttagatactaacggttg 7482687  T
Q  308 agggtctttgg 318  Q
    |||||||||||    
T  7482686 agggtctttgg 7482676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 220 - 318
Target Start/End: Complemental strand, 42298518 - 42298420
Alignment:
Q  220 cactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||| ||| ||||||||||||||| ||||||||||| |||   |||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  42298518 cactccctgatccatttgttgggtaagcttggtgaatcccataacaaccaaaggatgaaacttttagggttttagatactaaaggttgagggtctttgg 42298420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 193052 - 193158
Alignment:
Q  67 aggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattg 166  Q
    ||||||||||||| |||| |||||||| ||||| |||||| ||||||| ||||||||  || |||||||||||||||  |||||||| ||||||||||||    
T  193052 aggcagtgagcatggtttgcagggtgtccaatcatgacacaattttggaaaaacgtgataccattttcggcttgctgggcaagtttttaggataagattg 193151  T
Q  167 gtcgtac 173  Q
    |||||||    
T  193152 gtcgtac 193158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 28220746 - 28220665
Alignment:
Q  59 gattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggctt 139  Q
    |||||||| ||||||||||| |||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  28220746 gattttcttggcagtgagcactgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttcggctt 28220665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 44454830 - 44454923
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| | |||| ||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||| |||||| ||||| ||||    
T  44454830 tgttttctgagtgtccaatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgggcaagttttcaagataaggttggttgtac 44454923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 3189020 - 3189113
Alignment:
Q  79 ttgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgt 171  Q
    |||||||||||| || |||||||||||| |||||||||||||||| ||||||||||| |||||||  |||| |||| |||||||| ||||||||    
T  3189020 ttgttttcagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgt 3189113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 3197837 - 3197930
Alignment:
Q  79 ttgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgt 171  Q
    |||||||||||| || |||||||||||| |||||||||||||||| ||||||||||| |||||||  |||| |||| |||||||| ||||||||    
T  3197837 ttgttttcagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgt 3197930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 3206655 - 3206748
Alignment:
Q  79 ttgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgt 171  Q
    |||||||||||| || |||||||||||| |||||||||||||||| ||||||||||| |||||||  |||| |||| |||||||| ||||||||    
T  3206655 ttgttttcagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgt 3206748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 20762343 - 20762436
Alignment:
Q  81 gttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||| || |||||||||||||||||||||||| |||| ||||||||| |||||| ||  |||| ||||||||||||| ||||||||||    
T  20762343 gttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtac 20762436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 28223941 - 28223860
Alignment:
Q  59 gattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggctt 139  Q
    |||||||| ||||||||| | |||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  28223941 gattttcttggcagtgagaactgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttcggctt 28223860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 6808083 - 6808163
Alignment:
Q  232 catttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag-ggttttagatactaaaagttgaggg 311  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||   |||||||||||||| ||||||||    
T  6808083 catttgttgagtaagcttggtgaatctcatggaaaccaaaggaggaaacttttagattttttagatactaaaggttgaggg 6808163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 318
Target Start/End: Original strand, 41135432 - 41135544
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||||||| ||||| || | ||||||||||||||  ||| |||||| |||||||| |||||||||||||| || |||||  || ||||||||||||| ||    
T  41135432 aacactatttaagcgctgcttgacccatttgttgaataagcttggttaatctcatggaaaccaaaggagggaaattttaatgtatttagatactaaaggt 41135531  T
Q  306 tgagggtctttgg 318  Q
    |||||||||||||    
T  41135532 tgagggtctttgg 41135544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 31928348 - 31928277
Alignment:
Q  216 taagcactccatgacccatttg-ttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||||| |||||||||    
T  31928348 taagcactccatgacccatttgattgggtaagcttggtgaatttcatggaaaccaaaggagggaacttttag 31928277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 3156554 - 3156631
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||||||||||||| |  ||||||||| || |||||| ||| |||||||||||||| ||||||||||    
T  3156554 aatcgtgacacgattttgggaaaacataacacgatttttggtttgctggacacgttttcaggataaggttggtcgtac 3156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 37033792 - 37033691
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  ||| |||||||| |||||||||||||||||| || |||| || ||||||||||| ||||| |  ||||||||||||||||| ||||| ||    
T  37033792 gtgagcatgttttgcagggtgtccaatcgtgacacgattttcgggaaacatgacacgattttcgccttgcagggcaagttttcaggataaggttggttgt 37033693  T
Q  172 ac 173  Q
    ||    
T  37033692 ac 37033691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 13549760 - 13549709
Alignment:
Q  14 tttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttc 65  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  13549760 tttggaaaatgttggaatcgtgacacgattttggaatcgtggcacgattttc 13549709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 28242041 - 28242112
Alignment:
Q  248 ttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||  ||||||||||||| |||||||||||| | ||||||||||| |||||||||||||||    
T  28242041 ttggtgaatctcatgaaaaccaaaggagggaacttttagggtatgtagatactaaaggttgagggtctttgg 28242112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 31658915 - 31659002
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||  ||||||||||||||||||||||||||||| ||| |||||  ||||||||   |||||||||||||||| ||||| ||||    
T  31658915 cagggtgcccaatcgtgacacgattttgggaaaacgtgacacaattttttgcttgctgggaaagttttcaggataaggttggttgtac 31659002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 37167909 - 37168020
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttggg-taaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagtt 306  Q
    ||||||| ||||||||| |||||||||||| ||   ||  ||||| ||||||||| |||| ||||||||| ||||||||  ||||||||||||||| |||    
T  37167909 acactatttaagcactctatgacccatttggtgaaataggcttggggaatctcatggaaatcaaaggagggaacttttacagttttagatactaaaggtt 37168008  T
Q  307 gagggtctttgg 318  Q
    |||||| |||||    
T  37168009 gagggtttttgg 37168020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 37070349 - 37070244
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||||| |||||| |||||| |||| ||| |||| ||||||||| |||||||||||||||||||| |||    
T  37070349 aatcgtgacacgatttcatcaacgtgtcacgattttc-aggcagggagcatggtttctcaaggtgctcaatcgtgtcacgattttgggaaaacgtgacac 37070251  T
Q  128 gattttc 134  Q
    |||||||    
T  37070250 gattttc 37070244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 47114825 - 47114895
Alignment:
Q  248 ttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||| |||||||||||||| |||||||| || |||||||| ||||  ||||||||||||||    
T  47114825 ttggtgaatctcatggaaaccaaaggagggaacttttaaggctttagatattaaagattgagggtctttgg 47114895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 31928427 - 31928387
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacgattttgg 47  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31928427 tttggtgtttggaaaatgttggaatcgtgacacgattttgg 31928387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 13659786 - 13659735
Alignment:
Q  91 tgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgct 142  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  13659786 tgttcaatcgtgatacgattttgggaaaatgtgtcacgattttcggcttgct 13659735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 13598982 - 13598837
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||| |||||||| |||||| ||||| || ||| |||||||||| || ||||||||||||| ||| |||    
T  13598982 aatcgtgacacgatttcatcaacgtgtcacgattt-ctaggcagcgagcatggtttttcaaggtattcaatcgtgtcatgattttgggaaaatgtgacac 13598884  T
Q  128 gattttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||   |||||||   | |||||||||||||| ||||||||||    
T  13598883 gattttcaaacttgctgggtacgttttcaggataaggttggtcgtac 13598837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 19753996 - 19754053
Alignment:
Q  18 gaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtga 75  Q
    |||| ||||||||||||||||||||||||| || |||||||||||||| |||| ||||    
T  19753996 gaaagtgttggaatcgtgacacgattttgggatcgtggcacgattttcaaggctgtga 19754053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 9109958 - 9109846
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||||||| |||||| ||| |||||||||| ||| |  |||||||||||| |||| |||| |||| || ||||||||| |||| | || |||||||| ||    
T  9109958 aacactatttaagcaatccttgacccatttattgagacaacttggtgaatgtcatggaaatcaaatgatgaaacttttggggtatataaatactaaaggt 9109859  T
Q  306 tgagggtctttgg 318  Q
    ||||||| |||||    
T  9109858 tgagggtatttgg 9109846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 30476976 - 30476892
Alignment:
Q  28 gaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgatttt 112  Q
    ||||||||||||||||| |  |  ||| ||||||||||||||||||| ||||  ||| ||||||||  |||||||||||||||||    
T  30476976 gaatcgtgacacgatttagtaagcgtgtcacgattttctaggcagtgggcatgttttgcagggtgtctaatcgtgacacgatttt 30476892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 29652369 - 29652307
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaa 119  Q
    |||||||||| ||||||||||||| |||| ||||||| ||||||||| ||||||||||| ||||    
T  29652369 cacgattttc-aggcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttggaaaaa 29652307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 49918026 - 49918109
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtc 169  Q
    |||||||  |||||||||||||||||| | |||||||| |||||||||   |||||||  || |||||||||||||| ||||||    
T  49918026 cagggtgcccaatcgtgacacgattttcgaaaaacgtgacacgatttttaacttgctgggcacgttttcaggataaggttggtc 49918109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 4553139 - 4553053
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgta 172  Q
    |||||| | ||||||||||||||||||| |||||||||  | |||||||| |||| |  ||| |||||||||||||| || ||||||    
T  4553139 cagggtatccaatcgtgacacgattttgagaaaacgtgatatgattttcgacttgtttgacacgttttcaggataaggttagtcgta 4553053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 10924909 - 10924954
Alignment:
Q  95 caatcgtgacacgattttgggaaaacgtggcacgattttcggcttg 140  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||||    
T  10924909 caatcgtgacacgattttggaaaaatgtgacacgattttcggcttg 10924954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 3282288 - 3282183
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattg-ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| ||||| |||| |||||| ||| || | |||||| |||| ||||||||| |||||||||| ||||||||| |||    
T  3282288 aatcgtgacacgatttcatcaacgtgtcacgaatttc-aggcagggagtatggtttttcaaggtgctcaatcgtgtcacgattttgagaaaacgtgacac 3282190  T
Q  128 gattttc 134  Q
    |||||||    
T  3282189 gattttc 3282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 1833207 - 1833256
Alignment:
Q  95 caatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctga 144  Q
    |||| ||||||||||||||||||||| |  ||||||||| ||||||||||    
T  1833207 caatggtgacacgattttgggaaaacataacacgatttttggcttgctga 1833256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 9986895 - 9986931
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattt 132  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  9986895 aatcgtgacacgattttgggaaatcgtgacacgattt 9986931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 13604299 - 13604336
Alignment:
Q  94 tcaatcgtgacacgattttgggaaaacgtggcacgatttt 133  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  13604299 tcaatcgtgacacgattt--ggaaaacgtggcacgatttt 13604336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 166 - 318
Target Start/End: Original strand, 40146830 - 40146984
Alignment:
Q  166 ggtcgtacgcatcaaacgtgtcacgattttgtccggatctgaacactat--gtaagcactccatgacccatttgttgggtaaacttggtgaatctcattg 263  Q
    |||||||| || ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||| |    
T  40146830 ggtcgtactcaccaaacgtgtcacgattttgtctggatctgaacactatatgtaagcactccatgacccatttgttggttaagcttggtgaatctcatgg 40146929  T
Q  264 aaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  40146930 aaaccaaaggatgaaacttttagggttttagatactaaaggttgagggtctttgg 40146984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 5057433 - 5057595
Alignment:
Q  11 gtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgatt 110  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  5057433 gtgtttggaagatgttggaatcgtgacacgattttggcatcgtagcacgattttctaggcaatgagcatagttttcagggtgtccaatcgtgacacgatt 5057532  T
Q  111 ttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| |||||||| ||| ||||||| |||| ||| ||||||||||||||||| ||||||||||    
T  5057533 ttggtaaaacgtgacacaattttcgacttgttgagcaagttttcaggataaggttggtcgtac 5057595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 42428966 - 42428801
Alignment:
Q  30 atcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||| |  |  ||| |||||||||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  42428966 atcgtgacacgatttagtaagcgtgtcacgattttctaggaagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacg 42428867  T
Q  129 attttcggcttgctgaacaagttttcaggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    ||||| |||||||||  |||||||| |||||||| ||||||||||||| |||||||||||||||||    
T  42428866 atttttggcttgctgggcaagtttttaggataaggttggtcgtacgcaccaaacgtgtcacgattt 42428801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 318
Target Start/End: Original strand, 5057633 - 5057771
Alignment:
Q  179 aaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaa 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     | || |||||||||||| |||||||||||||  |    
T  5057633 aaacgtgacacgattttgtccggatctgaacactatgtaagcactccatgacccatttgtt-aaagagctgggtgaatctcatggaaaccaaaggagaga 5057731  T
Q  279 acttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  5057732 acttttagggttttagatactaaaggttgagggtctttgg 5057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 37438757 - 37438910
Alignment:
Q  21 aatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaac 120  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||    
T  37438757 aatgttggaatcgtgacatgattttggcatcgtggtacgattttcaaggcagtgagcatggttttcagagtgtccaatcgtgacatgattttgggaaaac 37438856  T
Q  121 gtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||| ||||||||| |||||| ||  |||| ||||||||||||| || |||||||    
T  37438857 gtgacacgatttttggcttgttgggcaagattttcaggataaggtttgtcgtac 37438910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 38746597 - 38746728
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    ||||||||||| ||||||||||||| || || ||| ||  |||| |||||||||||||| ||||||||||||||| |||||||||||||  |||||||||    
T  38746597 cacgattttgttcggatctgaacacaatatatgcattctttgactcatttgttgggtaagcttggtgaatctcatggaaaccaaaggagagaacttttag 38746696  T
Q  287 ggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||| |||||||||||||||    
T  38746697 ggttttagatactaaaggttgagggtctttgg 38746728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 213089 - 213191
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    |||| |||||||||||||||| |||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  213089 taagtactccatgacccattttttgggtaagcttgatgaatctcatggaaaccaaaggagggaacttttagggttttagatactaaaggttgagggtctt 213188  T
Q  316 tgg 318  Q
    |||    
T  213189 tgg 213191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 173
Target Start/End: Complemental strand, 42426754 - 42426639
Alignment:
Q  59 gattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcagg 157  Q
    |||||||| |||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||  ||||||||||||    
T  42426754 gattttctgggcagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacaattttcggtttgctgggcaagttttcagg 42426655  T
Q  158 ataagattggtcgtac 173  Q
    ||||| ||||||||||    
T  42426654 ataaggttggtcgtac 42426639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 28277922 - 28278038
Alignment:
Q  204 ctgaacactatgtaagcactccatgacccatttgttggg--taaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaa 301  Q
    ||||||||||| |||||||| ||||||||||||||||    ||| ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  28277922 ctgaacactatttaagcacttcatgacccatttgttgaaaataagcttggtgaatctcaaggaaactaaaggaggaaacttttagggttttagatactaa 28278021  T
Q  302 aagttgagggtctttgg 318  Q
    | |||||||||||||||    
T  28278022 aggttgagggtctttgg 28278038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 30683405 - 30683289
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacgcatca 179  Q
    ||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||    
T  30683405 tgttttcagagtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctaggcaagttttcaggataaggttggtcgtacgcatca 30683306  T
Q  180 aacgtgtcacgattttg 196  Q
    | |||| ||| ||||||    
T  30683305 atcgtgacacaattttg 30683289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 16642424 - 16642321
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtct 314  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||||| ||||||||||||| ||||| |||||    
T  16642424 taagcactccatgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagagcacttttagggtatttagatactaaaggttgatggtct 16642325  T
Q  315 ttgg 318  Q
    ||||    
T  16642324 ttgg 16642321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 13487825 - 13487967
Alignment:
Q  30 atcgtgacacgattttggcattgtggcacgattttc-taggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    |||||||||||||||   ||  ||| |||||||||| | |||| |||||||  ||||||||||| |||||||||||||||||||||||||||   |||||    
T  13487825 atcgtgacacgatttcatcaacgtgtcacgattttccttggcaatgagcatatttttcagggtgctcaatcgtgacacgattttgggaaaaca--gcacg 13487922  T
Q  129 attttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||    
T  13487923 attttcggcttgctgggcaagttttcaggataaggttggtcgtac 13487967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 27015119 - 27015255
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatga-cccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaac 280  Q
    |||| ||||||||||||||||||||||||| || || ||| || |||| |||||||| ||||||  ||||| |||||| || |||| ||||||||| |||    
T  27015119 cgtgacacgattttgtccggatctgaacacaatatatgcattctatgaccccatttg-tgggtatgcttggcgaatctaatggaaatcaaaggagggaac 27015217  T
Q  281 ttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||||||||| |||||||||||||||    
T  27015218 ttttagggttttagatactaaaggttgagggtctttgg 27015255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 40146692 - 40146813
Alignment:
Q  52 gtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagtt 151  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||| | |||||||| ||||| ||  || |||    
T  40146692 gtggcacgattttctaggcagtgaacatggttttcagggtgtccaatcgtgacacgattttgggaaaatgtgactcgattttcagcttgttggtcacgtt 40146791  T
Q  152 ttcaggataagattggtcgtac 173  Q
    ||||||| ||  ||||||||||    
T  40146792 ttcaggaaaaagttggtcgtac 40146813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 32636476 - 32636588
Alignment:
Q  62 tttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggata 160  Q
    |||||||||||||| |||  ||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||    
T  32636476 tttctaggcagtgaacatgttttgcaaggtgtccaatcgtgacacgattttgggaaaacgtggcacgattttcgacttgctgggcaagtttttcaggata 32636575  T
Q  161 agattggtcgtac 173  Q
    || ||||||||||    
T  32636576 aggttggtcgtac 32636588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 38746451 - 38746535
Alignment:
Q  90 gtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacg 174  Q
    |||||||||||||||||  |||||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  38746451 gtgttcaatcgtgacacatttttggaaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtacg 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 13239423 - 13239516
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||| |||||| || | ||||||| |||||||||||||||||| ||||||||||    
T  13239423 tgtttttagggtgttcaatcgtgacaagattttgggtaaacgtgacacgatctttgacttgctggacaagttttcaggataaggttggtcgtac 13239516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 27638169 - 27638059
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttg 307  Q
    ||||||| ||||||||| ||||||||||||||    |  ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| ||||    
T  27638169 acactatttaagcactctatgacccatttgttaaaaaggcttggtgaatctcatggaaaccaaaggagggaacttttaaggttttagatactaaaggttg 27638070  T
Q  308 agggtctttgg 318  Q
    ||  |||||||    
T  27638069 agaatctttgg 27638059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 212991 - 213068
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgatttt 133  Q
    |||||||||||||| ||||||||| |||| ||||| || ||||||||||||||||||||||||||||| |||||||||    
T  212991 cacgattttctaggtagtgagcatggtttgcagggcgtccaatcgtgacacgattttgggaaaacgtgacacgatttt 213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 30792861 - 30792962
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtct 314  Q
    |||||||| | |||||||||||||  |||| ||||||||||||||| ||||||||| ||| |||||||||||||  |||||||||||| |||||||||||    
T  30792861 taagcacttcttgacccatttgttaagtaagcttggtgaatctcatggaaaccaaatgagtaaacttttagggtaattagatactaaaggttgagggtct 30792960  T
Q  315 tt 316  Q
    ||    
T  30792961 tt 30792962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 533492 - 533566
Alignment:
Q  120 cgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    |||| |||| ||||||||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  533492 cgtgacacggttttcggcttgctgggcaagttttcaggataaggttggtcgtacgcaccaaacgtgtcacgattt 533566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 317
Target Start/End: Original strand, 35615786 - 35615894
Alignment:
Q  210 actatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttga 308  Q
    ||||| |||||||||| |||   |||||||| |||| ||||||||||||| ||||||||||| ||  |||||||||| || ||||||||||||| |||||    
T  35615786 actatttaagcactccttgattaatttgttgcgtaagcttggtgaatctccttgaaaccaaatgaaaaaacttttagagtatttagatactaaaggttga 35615885  T
Q  309 gggtctttg 317  Q
    |||||||||    
T  35615886 gggtctttg 35615894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 11916514 - 11916592
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||||||||| ||||||||||  | |||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  11916514 cacgattttccaggcagtgagtgtggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 11916592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 14520811 - 14520706
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||||| |||||| |||||| |||| |||||||| ||||||||| || ||||||||||||||||| |||    
T  14520811 aatcgtgacacgatttcatcaacgtgtcacgattttc-aggcagggagcatggtttctcagggtgctcaatcgtgtcatgattttgggaaaacgtgacac 14520713  T
Q  128 gattttc 134  Q
    |||||||    
T  14520712 gattttc 14520706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 30802553 - 30802663
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||||||| |||| ||||| ||| | |||||||| |||  ||||||||||||||| ||||||||| |||| |||||||||||| |||||||| |  | ||    
T  30802553 aacactatttaagtactccttgatcgatttgttgagtacgcttggtgaatctcatggaaaccaaatgagggaacttttagggtatttagatattctaggt 30802652  T
Q  306 tgagggtcttt 316  Q
    |||||||||||    
T  30802653 tgagggtcttt 30802663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 316
Target Start/End: Complemental strand, 33906687 - 33906578
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||||||| |||||||||| | ||||||||||||   || |||||||||||||| ||||||||||| ||  |||||||||||| |||||||| |||| ||    
T  33906687 aacactatttaagcactccttaacccatttgttgaacaagcttggtgaatctca-tgaaaccaaagaagagaacttttagggtatttagatattaaaggt 33906589  T
Q  306 tgagggtcttt 316  Q
    ||||| |||||    
T  33906588 tgaggttcttt 33906578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 535614 - 535667
Alignment:
Q  120 cgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  535614 cgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtac 535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 12083693 - 12083798
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   ||  ||| |||||||| | ||||||||||||| |||| ||||||| ||||| ||| |||  ||||||||||||||| ||||    
T  12083693 aatcgtgacacgatttcatcaacgtgtcacgatttcccaggcagtgagcatggtttacagggtgctcaattgtgtcacagttttgggaaaacgtgacacg 12083792  T
Q  129 attttc 134  Q
    ||||||    
T  12083793 attttc 12083798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 317
Target Start/End: Complemental strand, 14689963 - 14689853
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttaggg-ttttagatactaaaagt 305  Q
    |||||||| |||||| ||| | |||||||||||| |||  ||||||||||||||| ||||| ||||||| ||||||||||||  |||||||| | || ||    
T  14689963 aacactatttaagcattcctt-acccatttgttgagtaggcttggtgaatctcatggaaactaaaggagaaaacttttagggcatttagatagtgaaggt 14689865  T
Q  306 tgagggtctttg 317  Q
    | ||||||||||    
T  14689864 taagggtctttg 14689853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 16651133 - 16651026
Alignment:
Q  67 aggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagatt 165  Q
    |||||||||||| |||||| ||||||  |||||| ||||||||||||||||||||||| ||||||||    |||| ||   | |||||||||||||| ||    
T  16651133 aggcagtgagcaatgtttttcagggtactcaatcatgacacgattttgggaaaacgtgacacgatttataacttgttgggtacgttttcaggataaggtt 16651034  T
Q  166 ggtcgtac 173  Q
    ||||||||    
T  16651033 ggtcgtac 16651026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 28751073 - 28751027
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattt 132  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  28751073 cagggtgttcaatcgtgacacgattttgggaaaacgtgacacaattt 28751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 318
Target Start/End: Original strand, 316371 - 316489
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggt------gaatctcattgaaaccaaaggaggaaacttttagggtt-ttagatact 299  Q
    |||| ||| |||||||||| |||||||||||||| |||| ||||||      ||||||||| ||||| |||||||  ||||||||  ||  |||||||||    
T  316371 aacattatttaagcactccttgacccatttgttgagtaagcttggtaatggtgaatctcatggaaactaaaggagagaacttttattgtacttagatact 316470  T
Q  300 aaaagttgagggtctttgg 318  Q
    ||| |||||||||||||||    
T  316471 aaaggttgagggtctttgg 316489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 9352850 - 9352995
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctag-gcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||| ||||| |||||| ||| ||||||||| ||  || |||||| | |||| ||||||||  ||||||| ||||||| || |||| |||| |||    
T  9352850 aatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagc-tggtttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacac 9352948  T
Q  128 gattttcgg-cttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||   |||||||   |||||||||||||||| ||||||||||    
T  9352949 gattttcaaacttgctggttaagttttcaggataaggttggtcgtac 9352995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 39468989 - 39468936
Alignment:
Q  120 cgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| ||||||||||||||||||| ||| ||||| |||||||| ||||||||||    
T  39468989 cgtgacacgattttcggcttgctggacacgtttttaggataaggttggtcgtac 39468936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 15464984 - 15464937
Alignment:
Q  147 aagttttcaggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    |||||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  15464984 aagttttcaggataaggttggtcgtacgtatcaatcgtgacacgattt 15464937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 30683308 - 30683269
Alignment:
Q  94 tcaatcgtgacacgattttgggaaaacgtggcacgatttt 133  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  30683308 tcaatcgtgacacaattttgggaaaacgtgacacgatttt 30683269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 4160289 - 4160363
Alignment:
Q  250 ggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttggtgatg 323  Q
    |||||||||||| ||||||||| |||  ||| |||||||| |||||||||||||  |||||||| || |||||||    
T  4160289 ggtgaatctcatggaaaccaaatgagagaacatttagggtatttagatactaaagtttgagggttttgggtgatg 4160363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 29402592 - 29402626
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattt 63  Q
    |||||||||||||||||||||| ||||||||||||    
T  29402592 aatcgtgacacgattttggcatcgtggcacgattt 29402626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 3076040 - 3075996
Alignment:
Q  150 ttttcaggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    |||||| |||||| |||||||||||||||||  ||||||||||||    
T  3076040 ttttcaagataaggttggtcgtacgcatcaactgtgtcacgattt 3075996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 8e-55; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 178 - 318
Target Start/End: Original strand, 17762570 - 17762710
Alignment:
Q  178 caaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggagga 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||      
T  17762570 caaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatggcccatttgttgggtaagcttggtgaatctcatggaaacaaaaggagag 17762669  T
Q  278 aacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  17762670 aacttttagggttttagatactaaaggttgaggatctttgg 17762710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 21593258 - 21593389
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||    |||||||||    
T  21593258 cacgattttgtccggatatgaacactatgtaagcactccataacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggttagaacttttag 21593357  T
Q  287 ggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||| |||||||||||||||    
T  21593358 ggttttagatactaaatgttgagggtctttgg 21593389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 26830708 - 26830570
Alignment:
Q  179 aaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaa 278  Q
    ||||||| ||||| ||||||||||||| |||| ||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |    
T  26830708 aaacgtgacacgaatttgtccggatctaaacaatatataagcactccatgatccatttgttgggtaagcttggtgaatctcatggaaaccaaaggaggga 26830609  T
Q  279 acttttagggttttagatactaaaagttgagggtctttg 317  Q
    ||||||||||||||||||| |||| | ||||||||||||    
T  26830608 acttttagggttttagataataaaggctgagggtctttg 26830570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 188 - 318
Target Start/End: Complemental strand, 3809284 - 3809154
Alignment:
Q  188 acgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagg 287  Q
    ||||||||||||||||||||||||  | |||||| ||  |||||||||||||| | || ||||||||||||||| |||||||||||||| ||||||||||    
T  3809284 acgattttgtccggatctgaacacattataagcattctttgacccatttgttgagcaagcttggtgaatctcatggaaaccaaaggagggaacttttagg 3809185  T
Q  288 gttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||| |||||||||||||||    
T  3809184 gttttagatactaaaggttgagggtctttgg 3809154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 21593095 - 21593212
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttca 155  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||  || ||||| |    
T  21593095 cacgattttctaggtagtgagcatggttttcagggtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggcatgttttta 21593194  T
Q  156 ggataagattggtcgtac 173  Q
    ||||||| ||||||||||    
T  21593195 ggataaggttggtcgtac 21593212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 245
Target Start/End: Complemental strand, 603723 - 603557
Alignment:
Q  91 tgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagatt------------ggtcgtacgcatc 178  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||||||| ||            | ||||||||| |    
T  603723 tgttcaatcgtgacacgattttgggaaaacgtgacatgattttcggcttgctgggcaagttttcaggataaggttgatcgtatcttggatcgtacgcacc 603624  T
Q  179 aaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaa 245  Q
    |||||||||||| |||||||||||||||||||| || |||||| ||  |||||||||||||| ||||    
T  603623 aaacgtgtcacgcttttgtccggatctgaacacaatataagcattctttgacccatttgttgagtaa 603557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 22964222 - 22964135
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  22964222 cagggtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttggcttgctggacaagttttcaggataaggttggtcgtac 22964135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 23824171 - 23824258
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  23824171 cagggtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttggcttgctggacaagttttcaggataaggttggtcgtac 23824258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 9183505 - 9183414
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||  ||||||||||||||||| ||||||||||    
T  9183505 tttttagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgacttgctgggcaagttttcaggataaggttggtcgtac 9183414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 22425358 - 22425272
Alignment:
Q  231 ccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  22425358 ccatttgttggataagcttggtgaatctcatggaaaccaaaggagggaac-tttagggttttagatactaaaggttgagggtctttgg 22425272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 2973495 - 2973384
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttt-tagatactaaaagtt 306  Q
    ||||||| ||||||||  ||||||||||||||  |  | ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||    
T  2973495 acactatttaagcactttatgacccatttgttaagagaccttggtgaatctcatggaaaccaaaggagggaacttttagggtttgtagatactaaaggtt 2973396  T
Q  307 gagggtctttgg 318  Q
    || |||||||||    
T  2973395 gaaggtctttgg 2973384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 5043241 - 5043351
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttg 307  Q
    ||||||| ||||||||| ||||||||||| ||     | ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||  |||    
T  5043241 acactatttaagcactctatgacccatttattaaaggagcttggtgaatctcatggaaatcaaaggagggaacttttagggttttagatactaaagattg 5043340  T
Q  308 agggtctttgg 318  Q
    |||||||||||    
T  5043341 agggtctttgg 5043351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 31980071 - 31979954
Alignment:
Q  56 cacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    |||||||||| ||||||||||||| ||||| ||||||| ||||||||| ||||||||||| |||||||| ||| ||||||  |||||||  || ||||||    
T  31980071 cacgattttc-aggcagtgagcatggtttttcagggtgatcaatcgtgtcacgattttggaaaaacgtgacacaattttcaacttgctgggcacgttttc 31979973  T
Q  155 aggataagattggtcgtac 173  Q
    |||||||| ||||||||||    
T  31979972 aggataaggttggtcgtac 31979954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 17759427 - 17759490
Alignment:
Q  99 cgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataag 162  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  17759427 cgtgacacgattttggggaaacgtgacacaattttcggcttgctggacaagttttcaggataag 17759490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 25072817 - 25072909
Alignment:
Q  227 tgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    |||| ||||||||| |||| |||| |||||||||| |||| ||||| ||  |||||||||||| ||||||||||||| |||||||||||||||    
T  25072817 tgactcatttgttgagtaagcttgatgaatctcatggaaatcaaagaagtgaacttttagggtatttagatactaaaggttgagggtctttgg 25072909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 31086020 - 31086092
Alignment:
Q  62 tttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||| ||||||||||||| |||| ||||||| ||||||||| ||||||||||| |||||||| ||||||||||    
T  31086020 tttccaggcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacacgattttc 31086092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 3809406 - 3809331
Alignment:
Q  95 caatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||  ||  |||||||||||||||| ||||||||||    
T  3809406 caatcgtgacacgattttggggaaacgtgacacgattttcggcttg-gga--aagttttcaggataaggttggtcgtac 3809331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 26661421 - 26661495
Alignment:
Q  99 cgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||||||||| ||| || |||||||| ||||||| ||  |||||||||||||| ||||||||||    
T  26661421 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtac 26661495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 26767392 - 26767466
Alignment:
Q  99 cgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||||||||| ||| || |||||||| ||||||| ||  |||||||||||||| ||||||||||    
T  26767392 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtac 26767466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 5017050 - 5017115
Alignment:
Q  69 gcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||| |||| ||||||| ||||||||| |||||||||| ||||||||| ||||||||||    
T  5017050 gcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttgagaaaacgtgacacgattttc 5017115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 5407406 - 5407312
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||| |||| |||||||||||||||||||| ||| |||| |||  |||| |||||||||  |||| |||||| |||||| ||||||||||    
T  5407406 tgttttcagagtgtccaatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggcaagattttcaagataaggttggtcgtac 5407312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 5411731 - 5411637
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||||||| |||| |||||||||||||||||||| ||| |||| |||  |||| |||||||||  |||| |||||| |||||| ||||||||||    
T  5411731 tgttttcagagtgtccaatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggcaagattttcaagataaggttggtcgtac 5411637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 24714885 - 24714809
Alignment:
Q  96 aatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||| |||||||| || |||||||| ||||||||||  |||||||  || |||||||||||||||||||||||||    
T  24714885 aatcgtgccacgattt-ggaaaaacgtgacacgattttcaacttgctgggcacgttttcaggataagattggtcgtac 24714809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 26661533 - 26661621
Alignment:
Q  179 aaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaac 267  Q
    ||||||| || |||| || |||||||||||||||   || ||| || |||||| ||||||||||||| ||||||||||||||| |||||    
T  26661533 aaacgtgacatgattatgcccggatctgaacactgcatatgcattctatgaccaatttgttgggtaagcttggtgaatctcatggaaac 26661621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 26767504 - 26767592
Alignment:
Q  179 aaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaac 267  Q
    ||||||| || |||| || |||||||||||||||   || ||| || |||||| ||||||||||||| ||||||||||||||| |||||    
T  26767504 aaacgtgacatgattatgcccggatctgaacactgcatatgcattctatgaccaatttgttgggtaagcttggtgaatctcatggaaac 26767592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 26800438 - 26800494
Alignment:
Q  263 gaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||    
T  26800438 gaaaccaaaggagaaaacttttagggtatgtagatactaaaggttgagggtctttgg 26800494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 10076764 - 10076851
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||  ||||| ||| |||||||||||||||||||  ||||||||   ||||||||  | |||||||||||||| ||||||||||    
T  10076764 cagggtgcccaatcatgatacgattttgggaaaacgtgatacgatttttaacttgctgattacgttttcaggataaggttggtcgtac 10076851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 18234611 - 18234520
Alignment:
Q  83 tttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||||| ||||||||| || |||||||||||||||||  |||||||||   |||||||   | |||||||||||||| ||||||||||    
T  18234611 tttcagggtgctcaatcgtgtcaggattttgggaaaacgtgatacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtac 18234520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 24435541 - 24435632
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||| ||||| | ||||||| || ||||||||||||||||| ||||||||||  |||| |   || |||||||||||||| ||||||||||    
T  24435541 ttttctgggtgctgaatcgtgtcatgattttgggaaaacgtgacacgattttcaacttgtttggcacgttttcaggataaggttggtcgtac 24435632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 21272563 - 21272609
Alignment:
Q  87 agggtgttcaatcgtgacacgattttgggaaaacgtggcacgatttt 133  Q
    ||||||| ||||||||||||||||||||| || |||| |||||||||    
T  21272563 agggtgtccaatcgtgacacgattttgggtaatcgtgtcacgatttt 21272609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 5757046 - 5757139
Alignment:
Q  81 gttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcgg-cttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| ||||||||  |||||||  ||||||||| |||| |||| ||||||||||   |||||||   |||||||||||||||| ||||||||||    
T  5757046 gtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtac 5757139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 33160831 - 33160799
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgatttt 112  Q
    |||||||||||||| ||||||||||||||||||    
T  33160831 tgttttcagggtgtccaatcgtgacacgatttt 33160799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 178 - 318
Target Start/End: Original strand, 45726513 - 45726653
Alignment:
Q  178 caaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggagga 277  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||     
T  45726513 caaatgtgacacgattttgttcggatctgaacactatgtaagcactccatgacccatttgttgggtaagcttggtgaatctcatggaaaccaaatgaggg 45726612  T
Q  278 aacttttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  45726613 aacttttagggttttagatactaaaggttgagagtctttgg 45726653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 35447465 - 35447338
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||    
T  35447465 cgtgacacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggagagaact 35447366  T
Q  282 tttagggttttagatactaaaagttgag 309  Q
    ||||||||||||||||||||| ||||||    
T  35447365 tttagggttttagatactaaaggttgag 35447338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 17863804 - 17863955
Alignment:
Q  21 aatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaac 120  Q
    |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||||||| |||||||||||  |||||||||||||    
T  17863804 aatgttggaatcgtgacacgattttggcatcgtcgcacgattttcaaggcagtgagcatggttttcagggtgtccaatcgtgacataattttgggaaaac 17863903  T
Q  121 gtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgt 171  Q
    ||| |||||||||   |||||||  |||| |||| |||||||| ||||||||    
T  17863904 gtgacacgattttttacttgctgggcaagtttttgaggataaggttggtcgt 17863955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 56 - 194
Target Start/End: Original strand, 39284543 - 39284682
Alignment:
Q  56 cacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttc 154  Q
    |||||||||||||||||||||||| ||||  |||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||   ||||||||    
T  39284543 cacgattttctaggcagtgagcatggtttcgcagggtgtcctatcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggaaagttttc 39284642  T
Q  155 aggataagattggtcgtacgcatcaaacgtgtcacgattt 194  Q
    |||||||| ||||||||||||| |||| ||||||||||||    
T  39284643 aggataaggttggtcgtacgcaccaaatgtgtcacgattt 39284682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 17450199 - 17450313
Alignment:
Q  203 tctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaa 302  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||| | ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  17450199 tctgaacactatttaagcacttcatgacccatttgttgggcaaacttagagaatctcatggaaaccaaaggagggaacttttagggttttagatactaaa 17450298  T
Q  303 agttgagggtctttg 317  Q
     ||||||||||||||    
T  17450299 ggttgagggtctttg 17450313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 317
Target Start/End: Complemental strand, 1632279 - 1632178
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  1632279 taagcactccatgacctatttgttgtgtaagcttggtgaatctcatggaaaccaaaggagggaacttttagggttttagatactaaaggttgagggtctt 1632180  T
Q  316 tg 317  Q
    ||    
T  1632179 tg 1632178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 29867549 - 29867665
Alignment:
Q  79 ttgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtacgcat 177  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||  |||| |||||| |||||| ||||| |||||||     
T  29867549 ttgttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaagataaggttggttgtacgcac 29867648  T
Q  178 caaacgtgtcacgattt 194  Q
    |||||||||||||||||    
T  29867649 caaacgtgtcacgattt 29867665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 307
Target Start/End: Original strand, 7450921 - 7451013
Alignment:
Q  216 taagcactccatgacccattt-gttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttg 307  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||    
T  7450921 taagcactccatgacccattttgttgggtaagcttggtgaatctcatggaaacaaaaggagggaacttttagggttttagatactaaaggttg 7451013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 173
Target Start/End: Complemental strand, 35447619 - 35447505
Alignment:
Q  59 gattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcagga 158  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||| |||| |||  |  |||||||||| ||    
T  35447619 gattttctaggcagtgagcattgttttcagggtgttcaattgtaacacgattttgggaaaatgtgacacgattatcggtttgtcgggcaagttttcaaga 35447520  T
Q  159 taagattggtcgtac 173  Q
    |||| ||| ||||||    
T  35447519 taaggttgctcgtac 35447505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 6595492 - 6595378
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtacgcatc 178  Q
    |||||||||||||| |||||||||||| |||||||||||||||| ||||||||| |||||||||  | || ||||||||||||| || ||||||||||||    
T  6595492 tgttttcagggtgtccaatcgtgacacaattttgggaaaacgtgacacgatttttggcttgctgggctagattttcaggataaggttagtcgtacgcatc 6595393  T
Q  179 aaacgtgtcacgatt 193  Q
    || | || |||||||    
T  6595392 aatcttgacacgatt 6595378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 36988573 - 36988479
Alignment:
Q  80 tgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||  |||| ||||||||||||| ||||||||||    
T  36988573 tgttttcagggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtac 36988479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 2837335 - 2837248
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||   |||||||||||||||| ||||||||||    
T  2837335 cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaccttgctgggtaagttttcaggataaggttggtcgtac 2837248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 42288663 - 42288554
Alignment:
Q  208 acactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttg 307  Q
    ||||||| ||||||||| ||||||||||||||    || || |||||||||||| ||||||||| |||  ||||||||||||||||||||||||| ||||    
T  42288663 acactatttaagcactctatgacccatttgttaaa-aagctaggtgaatctcatggaaaccaaatgagagaacttttagggttttagatactaaaggttg 42288565  T
Q  308 agggtctttgg 318  Q
    |||||||||||    
T  42288564 agggtctttgg 42288554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 14698528 - 14698669
Alignment:
Q  32 cgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgatt 131  Q
    |||||||||||||   ||| ||| ||| ||||||||||||||||||||  ||||| || |||||| ||||  |||||||||||||||||||| |||||||    
T  14698528 cgtgacacgatttcctcatcgtgacacaattttctaggcagtgagcatgattttctggatgttcattcgtatcacgattttgggaaaacgtgacacgatt 14698627  T
Q  132 ttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||  |||| ||  ||  ||||||||||||| ||||||||||    
T  14698628 ttcaacttgttgggcacattttcaggataaggttggtcgtac 14698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 20522771 - 20522659
Alignment:
Q  62 tttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggata 160  Q
    |||| ||||| ||||||| ||||| ||||||| ||||||||| |||||||||| ||||||||| ||||||||||  |||||||  || ||||||||||||    
T  20522771 tttccaggcaatgagcatggtttttcagggtgctcaatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgttttcaggata 20522672  T
Q  161 agattggtcgtac 173  Q
    || ||||||||||    
T  20522671 aggttggtcgtac 20522659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 36318501 - 36318413
Alignment:
Q  86 cagggtgttcaatcgtgacacgatttt-gggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||||  || |||||||||||||| ||||||||||    
T  36318501 cagggtgtccaatcgtgacacgatttttggggaaacgtgacacgattttcggcttgctggccacgttttcaggataaggttggtcgtac 36318413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 42262186 - 42262054
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    ||||||||||   ||||||||||||||| ||||||  |  |||||||||||||| | || |||||||||||||||   |||||||||||| | |||||||    
T  42262186 cacgattttgcttggatctgaacactatataagcatcctttgacccatttgttgagcaagcttggtgaatctcatgagaaccaaaggagggagcttttag 42262087  T
Q  287 ggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||| | ||||||||||| |||||||||||||||    
T  42262086 ggtatgtagatactaaaggttgagggtctttgg 42262054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 34389382 - 34389287
Alignment:
Q  79 ttgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||   | |||||||||||||| ||||||||||    
T  34389382 ttgttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtac 34389287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 21630526 - 21630382
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttc-agggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||| | ||||||||||||| |||||  |||||| ||||||||| ||| ||||||||||||| || |||    
T  21630526 aatcgtgacacgatttcatcaacgtgtcacgatttcc-aggcagtgagcatggttttttagggtgctcaatcgtgtcacaattttgggaaaacatgacac 21630428  T
Q  128 gattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||  |||||||  || |||||||||||||| ||||||||||    
T  21630427 gattttcaacttgctgggcacgttttcaggataaggttggtcgtac 21630382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 45726453 - 45726530
Alignment:
Q  56 cacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgatttt 133  Q
    ||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||||| ||| ||| |||||||||    
T  45726453 cacgattttctaggcagtgagcatgattttcagggtgtccaattgtgacacgattttgggcaaatgtgacacgatttt 45726530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 33528177 - 33528244
Alignment:
Q  67 aggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  33528177 aggcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 33528244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 10706768 - 10706913
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttt-tcagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||||| |||||| |||||| |||| |||||||| ||||| ||| |||||||||||||||||||| |||    
T  10706768 aatcgtgacacgatttcatcaacgtgtcacgattttc-aggcagggagcatggtttctcagggtgctcaattgtgtcacgattttgggaaaacgtgacac 10706866  T
Q  128 gattttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||   ||||||| | | ||||| |||||||| ||||||||||    
T  10706867 gattttcaaacttgctggatacgttttaaggataaggttggtcgtac 10706913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 45099426 - 45099519
Alignment:
Q  81 gttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    ||||| ||||||| |||||||||||| |||||||||||  ||| ||||||||| |||||||||  |||| ||||||||||||| ||||||||||    
T  45099426 gtttttagggtgtccaatcgtgacacaattttgggaaattgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtac 45099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 17865759 - 17865614
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttc-agggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    |||||||||| |||||   ||| ||| |||||||||| ||||||||||||| |||||  |||||| |||||| || |||||||||||||||| ||| |||    
T  17865759 aatcgtgacatgatttcatcatcgtgtcacgattttc-aggcagtgagcatggttttttagggtgctcaatcatgtcacgattttgggaaaatgtgacac 17865661  T
Q  128 gattttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||   |||||||   | |||||||||||||| ||||||||||    
T  17865660 gattttcaaacttgctgggtacgttttcaggataaggttggtcgtac 17865614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 23077987 - 23078092
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   ||  ||| |||||||| | ||||||||||||| | ||  |||||| ||||| ||| |||||||||||||||||||| ||||    
T  23077987 aatcgtgacacgatttcatcaacgtgtcacgatttcccaggcagtgagcatggattgtagggtgctcaattgtgtcacgattttgggaaaacgtgacacg 23078086  T
Q  129 attttc 134  Q
    ||||||    
T  23078087 attttc 23078092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 30218570 - 30218478
Alignment:
Q  227 tgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||||| ||| ||||||||| |||||||||| | || |||  ||||||||| |||||||||||| ||||||||||| | |||||||||||||||    
T  30218570 tgacctattcgttgggtaatcttggtgaatattatggaactcaaaggagggaacttttagggtatttagatactatatgttgagggtctttgg 30218478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 39483405 - 39483353
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  39483405 ttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttc 39483353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 13569879 - 13569807
Alignment:
Q  62 tttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||| ||||||||||||| |||| ||||||| ||||||||| ||  ||||||| |||||||| ||||||||||    
T  13569879 tttccaggcagtgagcatggtttgcagggtgctcaatcgtgtcataattttggaaaaacgtgacacgattttc 13569807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 33647820 - 33647892
Alignment:
Q  247 cttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagttgagggtctttgg 318  Q
    |||||||||| |||| |||||||||||||  ||||||||| || ||||||||||||| ||||| |||||||||    
T  33647820 cttggtgaatttcatggaaaccaaaggagagaacttttagagtatttagatactaaaggttgaaggtctttgg 33647892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 317
Target Start/End: Original strand, 24397651 - 24397779
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| |||| ||||||| ||||||||||||||| ||||||  |  || | ||||||||||  || ||||||||||||||| ||||||        |||||    
T  24397651 cgtgacacggttttgtctggatctgaacactatataagcatcctttggctcatttgttggaaaagcttggtgaatctcatggaaacc--------aaact 24397742  T
Q  282 tttagggt-tttagatactaaaagttgagggtctttg 317  Q
    |||||||| ||||||||||||| ||||| ||||||||    
T  24397743 tttagggtatttagatactaaaggttgacggtctttg 24397779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 7450786 - 7450832
Alignment:
Q  18 gaaaatgttggaatcgtgacacgattttggcattgtggcacgatttt 64  Q
    |||| ||||||||||||||||||||||||| || |||||||||||||    
T  7450786 gaaagtgttggaatcgtgacacgattttgggatcgtggcacgatttt 7450832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 8389698 - 8389768
Alignment:
Q  62 tttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc 134  Q
    |||| |||||||||| ||  ||| ||||||||||  ||||| |||||||||||||||||||| ||||||||||    
T  8389698 tttccaggcagtgagtatgatttgcagggtgttc--tcgtgtcacgattttgggaaaacgtgacacgattttc 8389768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 33118663 - 33118572
Alignment:
Q  82 ttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||||| ||||||||| |||| |||| |||||||||| ||| ||||||  |||||||  ||  |||||| |||||| |||| |||||    
T  33118663 ttttcagggtgctcaatcgtgtcacgtttttaggaaaacgtgacacaattttcaacttgctgggcacattttcaagataaggttggccgtac 33118572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 5723712 - 5723658
Alignment:
Q  120 cgtggcacgattttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||| ||||||||| ||||||||| ||||| ||||||||||||| ||||||||||    
T  5723712 cgtgacacgatttttggcttgctggacaagattttcaggataaggttggtcgtac 5723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 28258745 - 28258838
Alignment:
Q  81 gttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcgg-cttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||| ||||||||  ||||||| ||| |||||| |||| |||| ||||||||||   |||||||   |||||||||||||||| ||||||||||    
T  28258745 gtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtac 28258838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 6728 - 6833
Alignment:
Q  7 tttggtgtttggaaaatgttggaatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacac 106  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  6728 tttggtgtttggaaaatgttggaatcgtgacacgattttggcatcgtggcacgattttctaggcagtgagcatggtttgcagggtgtccaatcgtgacac 6827  T
Q  107 gatttt 112  Q
    ||||||    
T  6828 gatttt 6833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 318
Target Start/End: Original strand, 6912 - 7051
Alignment:
Q  179 aaacgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaa 278  Q
    |||||||  |||||||||  ||||| |||||||| | || ||| ||  ||||||||||||||||||| ||||||||||||||| |||||||||||||| |    
T  6912 aaacgtgatacgattttgctcggatatgaacactttatatgcattctttgacccatttgttgggtaagcttggtgaatctcatggaaaccaaaggaggga 7011  T
Q  279 acttttagggttttagatactaaaagttgagggtctttgg 318  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  7012 acttttagggttttagatactaaaggttgagggtctttgg 7051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 11145 - 11281
Alignment:
Q  182 cgtgtcacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaact 281  Q
    |||| ||||||||||||||| ||||||||| || || ||| ||  ||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||    
T  11145 cgtgacacgattttgtccggttctgaacacaatatatgcattctttgacccatttgttgggtaagcttggtaaatctcatggaaaccaaaggagggaact 11244  T
Q  282 tttagggttttagatactaaaagttgagggtctttgg 318  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11245 tttagggttttagatactaaaggttgagggtctttgg 11281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 11003 - 11104
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  ||| |||||||| ||||||||||||||||||||| ||| ||| |||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  11003 gtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacacgattttcggtttgctgggcaagttttcaggataaggttggtcgt 11102  T
Q  172 ac 173  Q
    ||    
T  11103 ac 11104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 18547 - 18446
Alignment:
Q  216 taagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggttttagatactaaaagttgagggtctt 315  Q
    |||||| |||||||| |||||||||||||| || |||||||||||| ||||||||||||| |||||| || |||||||||||||||| |||| |||||||    
T  18547 taagcagtccatgacacatttgttgggtaagctgggtgaatctcatggaaaccaaaggagaaaacttata-ggttttagatactaaaggttgcgggtctt 18449  T
Q  316 tgg 318  Q
    |||    
T  18448 tgg 18446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 17755 - 17668
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||||||| |||||||||  |||| ||||| |||||| ||||||||||    
T  17755 cagggtgtccaaccgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagctttcatgataaggttggtcgtac 17668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 1962 - 1850
Alignment:
Q  207 aacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttagggt-tttagatactaaaagt 305  Q
    |||||||| |||||||||| ||||| |||||||  ||||||||||||||| | || ||||||||| |||  |||||||||||| ||||||||||||| ||    
T  1962 aacactatttaagcactccttgacctatttgttaagtaaacttggtgaattttatggaaaccaaatgagagaacttttagggtatttagatactaaaggt 1863  T
Q  306 tgagggtctttgg 318  Q
    ||| |||||||||    
T  1862 tgaaggtctttgg 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 491021 - 490889
Alignment:
Q  187 cacgattttgtccggatctgaacactatgtaagcactccatgacccatttgttgggtaaacttggtgaatctcattgaaaccaaaggaggaaacttttag 286  Q
    ||||||||||   ||||||||||||||| ||||||  |  |||||||||||||| | || |||||||||||||||   |||||||||||| | |||||||    
T  491021 cacgattttgcttggatctgaacactatataagcatcctttgacccatttgttgagcaagcttggtgaatctcatgagaaccaaaggagggagcttttag 490922  T
Q  287 ggt-tttagatactaaaagttgagggtctttgg 318  Q
    ||| | ||||||||||| |||||||||||||||    
T  490921 ggtatgtagatactaaaggttgagggtctttgg 490889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 434217 - 434297
Alignment:
Q  95 caatcgtgacacgattttgggaaaacgtggcacga-ttttcggcttgctgaacaag-ttttcaggataagattggtcgtac 173  Q
    |||||||||||||||||||||||| |||| ||||| |||| |||||||||  |||| ||||||||||||| ||||||||||    
T  434217 caatcgtgacacgattttgggaaatcgtgacacgattttttggcttgctgggcaagattttcaggataaggttggtcgtac 434297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 20920 - 20819
Alignment:
Q  72 gtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaacaagttttcaggataagattggtcgt 171  Q
    ||||||||  ||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||   ||||||| || ||||| ||||||||    
T  20920 gtgagcatgttttgcagggtgtccaatcatgacacgattttgggaaaacgtgacacgattttcggcttgttgggaaagtttttagaataaggttggtcgt 20821  T
Q  172 ac 173  Q
    ||    
T  20820 ac 20819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 149547 - 149496
Alignment:
Q  91 tgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgct 142  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  149547 tgttcaatcgtgatacgattttgggaaaatgtgtcacgattttcggcttgct 149496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 6267 - 6122
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgtttt-cagggtgttcaatcgtgacacgattttgggaaaacgtggcac 127  Q
    ||||||||||||||||   ||  ||| |||||||| |||||||| |||||| ||||| || ||| |||||||||| || ||||||||||||| ||| |||    
T  6267 aatcgtgacacgatttcatcaacgtgtcacgattt-ctaggcagcgagcatggtttttcaaggtattcaatcgtgtcatgattttgggaaaatgtgacac 6169  T
Q  128 gattttc-ggcttgctgaacaagttttcaggataagattggtcgtac 173  Q
    |||||||   |||||||   | |||||||||||||| ||||||||||    
T  6168 gattttcaaacttgctgggtacgttttcaggataaggttggtcgtac 6122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 3043 - 2930
Alignment:
Q  62 tttctaggcagtgagcattgttttc-agggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttc-ggcttgctgaacaagttttcaggat 159  Q
    |||| |||||| |||||| |||||  |||||  ||||||||| |||||||||||||||||||| | ||||||||   |||||||   | |||||||||||    
T  3043 tttccaggcagcgagcatggttttttagggtactcaatcgtgtcacgattttgggaaaacgtgacccgattttcaaacttgctgggtatgttttcaggat 2944  T
Q  160 aagattggtcgtac 173  Q
    ||| ||||||||||    
T  2943 aaggttggtcgtac 2930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 132956 - 132993
Alignment:
Q  94 tcaatcgtgacacgattttgggaaaacgtggcacgatttt 133  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  132956 tcaatcgtgacacgattt--ggaaaacgtggcacgatttt 132993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 86168 - 86066
Alignment:
Q  29 aatcgtgacacgattttggcattgtggcacgattttctaggcagtgagcattgttttcagggtgttcaatcgtgacacgattttgggaaaacgtggcacg 128  Q
    ||||||||||||||||   ||  ||| |||||||| | |||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||| ||||    
T  86168 aatcgtgacacgatttcatcaacgtgtcacgatttcc-aggcagggagcatggtttgcagggtgctcaatcatg-cacgattttgggaaaacgtgacacg 86071  T
Q  129 atttt 133  Q
    |||||    
T  86070 atttt 86066  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 173
Target Start/End: Original strand, 114262 - 114350
Alignment:
Q  85 tcagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgaac-aagttttcaggataagattggtcgtac 173  Q
    |||||| || ||||| ||||||||| ||||||||||||| ||||||||| |||||||||  | || ||||||||||||| ||||| ||||    
T  114262 tcagggcgtccaatcatgacacgatattgggaaaacgtgacacgatttt-ggcttgctgggcaaaattttcaggataaggttggtggtac 114350  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 45619 - 45582
Alignment:
Q  94 tcaatcgtgacacgattttgggaaaacgtggcacgatttt 133  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  45619 tcaatcgtgacacgattt--ggaaaacgtggcacgatttt 45582  T

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Target: scaffold0098; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 45723 - 45635
Alignment:
Q  86 cagggtgttcaatcgtgacacgattttgggaaaacgtggcacgattttcgg-cttgctgaacaagttttcaggataagattggtcgtac 173  Q
    ||||||||  ||||||| ||||||| || |||| |||| ||||||||||   |||||||   |||||||||||||||| ||||||||||    
T  45723 cagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggctaagttttcaggataaggttggtcgtac 45635  T

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