View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9573_high_4 (Length: 498)
Name: NF9573_high_4
Description: NF9573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9573_high_4 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 125; Significance: 4e-64; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 320 - 476
Target Start/End: Complemental strand, 570512 - 570356
Alignment:
| Q |
320 |
ttttaagatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaa |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || |||||| ||||||||||| |
|
|
| T |
570512 |
ttttaagatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcgtggattgaactttgaagttctcaaactcgaggtgttgaa |
570413 |
T |
 |
| Q |
420 |
cttgtcacatacatgagttgataacgaagaacgctatctgatttcaaagagttgtcg |
476 |
Q |
| |
|
||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
570412 |
cttgtcatatacaggagttgataacgaagaactctatctgatttcaaagagttgtcg |
570356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 480
Target Start/End: Original strand, 1524429 - 1524584
Alignment:
| Q |
325 |
agatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgt |
424 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| || ||| | |||| |||||| |||||||||||| |||||| ||||||||||||| |||| |
|
|
| T |
1524429 |
agatgttgtaaacttaggcatttgaacttagccaactgttctaaaatagaacttcatggaatgaactttgaagttcccaatttggaggtgttgaatttgt |
1524528 |
T |
 |
| Q |
425 |
cacatacatgagttgataacgaagaacgctatctgatttcaaagagttgtcgtggg |
480 |
Q |
| |
|
||| |||| | |||||| | ||| || |||| |||| ||| |||||||||||||| |
|
|
| T |
1524529 |
cacgtacaagtgttgatgatgaaacactctatatgatctcacagagttgtcgtggg |
1524584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 320 - 432
Target Start/End: Original strand, 1548361 - 1548474
Alignment:
| Q |
320 |
ttttaagatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcat-ggagtgaactttgaagctcccaaactggaggtgttga |
418 |
Q |
| |
|
|||||||||||||||| |||| || ||||||||||||| | | ||||||||| || | | ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
1548361 |
ttttaagatgttgtaagattagacagttgaacttagctcgtagtttaaaagtgaagctactttggactgaactttgaaattcccaaactggaggtgttga |
1548460 |
T |
 |
| Q |
419 |
acttgtcacataca |
432 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1548461 |
acttgtcacataca |
1548474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 12116518 - 12116634
Alignment:
| Q |
325 |
agatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgt |
424 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| |||| |||||| | ||||||| | || |||||||||| | ||| || | |||||||||||||||| |
|
|
| T |
12116518 |
agatgttgtaaactaaggcattaaaacttagcctactgttcaaaaataaaactgcgtagaatgaactttgatgttccaaatttagaggtgttgaacttgt |
12116617 |
T |
 |
| Q |
425 |
cacatacatgagttgat |
441 |
Q |
| |
|
|||||||| | |||||| |
|
|
| T |
12116618 |
cacatacaagtgttgat |
12116634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 1519146 - 1519201
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgat |
441 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||||||||||| | |||||| |
|
|
| T |
1519146 |
tgaactttgaagttcccaaactagaggtgttgaacttgtcacatacaagggttgat |
1519201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 432
Target Start/End: Complemental strand, 1600567 - 1600468
Alignment:
| Q |
333 |
taaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
|||| |||| |||||||||||||| || || |||| | |||| |||| ||| |||||||||||| || |||||||||||||||||||||||| ||||| |
|
|
| T |
1600567 |
taaaattagacatttgaacttagcccagtgttcaataatgaagctgcgaggaatgaactttgaagttcttaaactggaggtgttgaacttgtcatataca |
1600468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 8184034 - 8184089
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgat |
441 |
Q |
| |
|
|||||||||||| ||| ||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
8184034 |
tgaactttgaagttccgaaactagaggtgttgaacttgtcacatacaagagttgat |
8184089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 8187095 - 8187150
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgat |
441 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8187095 |
tgaactttgaaatttccaaactggaggtgttgaacttgtcacatacaagagttgat |
8187150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 474
Target Start/End: Complemental strand, 553574 - 553486
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaacgctatctgatttcaaagagttgt |
474 |
Q |
| |
|
|||||||| ||| || ||||||||||||||||||||||||| |||| |||||||| | |||| || || ||||||||||||||||| |
|
|
| T |
553574 |
tgaactttaaagttctcaaactggaggtgttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgt |
553486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 1537761 - 1537817
Alignment:
| Q |
376 |
ctgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
||||||||| |||||||||||| ||||||||| || ||||||||||||||| ||||| |
|
|
| T |
1537761 |
ctgcatggaatgaactttgaagttcccaaactagaagtgttgaacttgtcatataca |
1537817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 325 - 480
Target Start/End: Original strand, 55908671 - 55908826
Alignment:
| Q |
325 |
agatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgt |
424 |
Q |
| |
|
||||||||||| |||| |||||||| ||||| |||| |||| ||||||||| | | || | |||||| ||| ||| || | |||||||| ||||||| |
|
|
| T |
55908671 |
agatgttgtaaggttagacatttgaatttagcctactgttcaagagtgaaactacttagaataaactttaaagttcctgaattagaggtgtttaacttgt |
55908770 |
T |
 |
| Q |
425 |
cacatacatgagttgataacgaagaacgctatctgatttcaaagagttgtcgtggg |
480 |
Q |
| |
|
|||||||||| |||||| | ||| || |||| |||| ||||||| |||| ||||| |
|
|
| T |
55908771 |
cacatacatgtgttgatgatgaaacactctatatgatctcaaagaattgttgtggg |
55908826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 659799 - 659758
Alignment:
| Q |
391 |
tttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
659799 |
tttgaagttcccaaactagaggtgttgaacttgtcacataca |
659758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 426
Target Start/End: Original strand, 53761715 - 53761816
Alignment:
| Q |
325 |
agatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgt |
424 |
Q |
| |
|
||||||||||| ||||||||||||||||||| | || |||| |||||| || |||| ||||||||| || |||||| || |||| ||||||||||| |
|
|
| T |
53761715 |
agatgttgtaacattaggcatttgaacttagccgagtgttcaagagtgaagctaattggaatgaactttgtagttcccaagctagaggcgttgaacttgt |
53761814 |
T |
 |
| Q |
425 |
ca |
426 |
Q |
| |
|
|| |
|
|
| T |
53761815 |
ca |
53761816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 432
Target Start/End: Original strand, 1552766 - 1552817
Alignment:
| Q |
381 |
tggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
|||| ||||||||||| |||||||||||| |||||||| |||||||||||| |
|
|
| T |
1552766 |
tggactgaactttgaaattcccaaactggaagtgttgaatttgtcacataca |
1552817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 7225887 - 7225942
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgat |
441 |
Q |
| |
|
|||||||||||| || | || ||||||| |||||||||||||||||| |||||||| |
|
|
| T |
7225887 |
tgaactttgaagttctcgaattggaggtcttgaacttgtcacatacaagagttgat |
7225942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 432
Target Start/End: Original strand, 1489365 - 1489411
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
|||||||||||| ||||||||| || ||||||||||||||| ||||| |
|
|
| T |
1489365 |
tgaactttgaagttcccaaactagaagtgttgaacttgtcatataca |
1489411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 432
Target Start/End: Original strand, 12121461 - 12121507
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
|||||||||||| ||||||||| || ||||||||||||||| ||||| |
|
|
| T |
12121461 |
tgaactttgaagttcccaaactagaagtgttgaacttgtcatataca |
12121507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 371063 - 371027
Alignment:
| Q |
338 |
ttaggcatttgaacttagctcactgctcaaaagtgaa |
374 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
371063 |
ttaggcatttgaacttagcccactgctcaagagtgaa |
371027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 532306 - 532238
Alignment:
| Q |
364 |
tcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
|||| |||||| || | |||| |||||||||||| ||||| || |||||||||||||||||| ||||| |
|
|
| T |
532306 |
tcaagagtgaatctacttggaatgaactttgaagtccccaagctagaggtgttgaacttgtcatataca |
532238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 644925 - 644885
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
644925 |
tgaactttgaagttcccaaactggaggtgttagacttgtca |
644885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 1513411 - 1513451
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
|||||||||||| ||||||||| || ||||||||||||||| |
|
|
| T |
1513411 |
tgaactttgaagttcccaaactagaagtgttgaacttgtca |
1513451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 330 - 476
Target Start/End: Complemental strand, 21235709 - 21235563
Alignment:
| Q |
330 |
ttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacat |
429 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
21235709 |
ttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgtgtggagtgaactttgaagttcccaaactggaggtgttgaacttgtcatat |
21235610 |
T |
 |
| Q |
430 |
acatgagttgataacgaagaacgctatctgatttcaaagagttgtcg |
476 |
Q |
| |
|
||| |||||||||||||||||| |||| ||||||||||||| ||||| |
|
|
| T |
21235609 |
acaggagttgataacgaagaactctatttgatttcaaagagctgtcg |
21235563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 18315272 - 18315368
Alignment:
| Q |
381 |
tggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaacgctatctgatttcaaagagttgtcgt |
477 |
Q |
| |
|
|||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | |||| || |||| |||| ||||||||||||||| |
|
|
| T |
18315272 |
tggaatgaactttaaagttcccaaactggaggtgttgaacttgtcacatacaaaagttgatgatgaagcactctatgtgatctcaaagagttgtcgt |
18315368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 17636405 - 17636459
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttga |
440 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||| |
|
|
| T |
17636405 |
tgaactttgaagttcccaaattggaggtgttgaacttgtcacaaacaggagttga |
17636459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 480
Target Start/End: Complemental strand, 27922603 - 27922509
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaacgctatctgatttcaaagagttgtcgtggg |
480 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||| ||||| |||||| | |||| || ||| |||| |||||||||||| ||||| |
|
|
| T |
27922603 |
tgaactttgaagttcccaaattggaggtgttgaacttgtcatatacaaatgttgatgatgaagcactttatatgatctcaaagagttgttgtggg |
27922509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 28246299 - 28246353
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttga |
440 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
28246299 |
tgaactttgaagttcccaaactggaggtgttggacttgtcatttacaagagttga |
28246353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 441
Target Start/End: Original strand, 17628004 - 17628073
Alignment:
| Q |
372 |
gaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgat |
441 |
Q |
| |
|
|||| |||| |||||||||||| || | | ||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
17628004 |
gaaaatgcaaggagtgaactttaaactttctaaattggaggtgttgaacttgtcacatactagagttgat |
17628073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 365 - 473
Target Start/End: Complemental strand, 12102382 - 12102274
Alignment:
| Q |
365 |
caaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaacgctatctgatttc |
464 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
12102382 |
caaaagtgaaactgcatggattgaactttgaagttcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaactctatctgatttc |
12102283 |
T |
 |
| Q |
465 |
aaagagttg |
473 |
Q |
| |
|
||||||||| |
|
|
| T |
12102282 |
aaagagttg |
12102274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 6395018 - 6394904
Alignment:
| Q |
327 |
atgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
||||||||| |||| ||||||||||||||| ||| |||||||||||||| |||||| ||||||||| || |||| | ||||||||||||||||||||| |
|
|
| T |
6395018 |
atgttgtaagcttaaacatttgaacttagctttctgttcaaaagtgaaactacatggaatgaactttgcagttcccgagctggaggtgttgaacttgtca |
6394919 |
T |
 |
| Q |
427 |
catacatgagttgat |
441 |
Q |
| |
|
||||| | |||||| |
|
|
| T |
6394918 |
aatacaagcgttgat |
6394904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 6432317 - 6432201
Alignment:
| Q |
325 |
agatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgt |
424 |
Q |
| |
|
|||||||||||||||| |||||||||||||| | || ||||||||| || |||||| |||||||||||| |||||| ||| ||||||||||||||| |
|
|
| T |
6432317 |
agatgttgtaaacttaaacatttgaacttagcctattgtataaaagtgaagctacatggaatgaactttgaagttcccaagctgaaggtgttgaacttgt |
6432218 |
T |
 |
| Q |
425 |
cacatacatgagttgat |
441 |
Q |
| |
|
|| ||||| | |||||| |
|
|
| T |
6432217 |
caaatacaagcgttgat |
6432201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 426
Target Start/End: Complemental strand, 6426665 - 6426566
Alignment:
| Q |
327 |
atgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
||||||||| |||| ||||||||||||||| ||| ||||| |||||||| |||||| ||||||||| || |||| | |||||||||||||| |||||| |
|
|
| T |
6426665 |
atgttgtaagcttaaacatttgaacttagctttctgttcaaacgtgaaactacatggaatgaactttgcagttcccgagctggaggtgttgaatttgtca |
6426566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 6410160 - 6410046
Alignment:
| Q |
327 |
atgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
||||||||| |||| ||||||| ||||||| | ||| ||||||||| || |||||| |||||||||||| |||||| ||| |||||||||||| |||| |
|
|
| T |
6410160 |
atgttgtaagcttaagcatttggacttagcctattgcaaaaaagtgaagctacatggaatgaactttgaagttcccaagctgaaggtgttgaactagtca |
6410061 |
T |
 |
| Q |
427 |
catacatgagttgat |
441 |
Q |
| |
|
||||| | |||||| |
|
|
| T |
6410060 |
aatacaagcgttgat |
6410046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 12102417 - 12102377
Alignment:
| Q |
223 |
gcagaaaatcactagagctagtcactatagtggcgcaaaag |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12102417 |
gcagaaaatcactagagctagtcactatagtggcgcaaaag |
12102377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12102781 - 12102743
Alignment:
| Q |
1 |
cattacctgaccggagcatcactcttgaggtccttgtac |
39 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12102781 |
cattacctgaccggagcatcactcttgaggtccttgtac |
12102743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 432
Target Start/End: Original strand, 6589265 - 6589373
Alignment:
| Q |
324 |
aagatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttg |
423 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||| |||||||| || | |||| ||||||||| || ||||| |||||||||||||||||| |
|
|
| T |
6589265 |
aagatgttgtaagattaggcatttgaacttagccttctgtaagaaagtgaagctacttggaatgaactttgtagttcccatgctggaggtgttgaacttg |
6589364 |
T |
 |
| Q |
424 |
tcacataca |
432 |
Q |
| |
|
||| ||||| |
|
|
| T |
6589365 |
tcaaataca |
6589373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 432
Target Start/End: Complemental strand, 9410802 - 9410751
Alignment:
| Q |
381 |
tggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
9410802 |
tggattgaactttgaagctcccaagttggaggtgttgaatttgtcacataca |
9410751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 432
Target Start/End: Complemental strand, 6416081 - 6416015
Alignment:
| Q |
366 |
aaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
||||||||| || |||||| || |||||| || |||||| ||||||||||||||||||||| ||||| |
|
|
| T |
6416081 |
aaaagtgaagctacatggaatggactttgtagttcccaacctggaggtgttgaacttgtcaaataca |
6416015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 11936279 - 11936333
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttga |
440 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
11936279 |
tgaactttgaagttcccaaactggaggtgttggacttgtcatttacaagagttga |
11936333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 11948259 - 11948313
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttga |
440 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
11948259 |
tgaactttgaagttcccaaactggaggtgttggacttgtcatttacaagagttga |
11948313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 475
Target Start/End: Complemental strand, 28935144 - 28935055
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaacgctatctgatttcaaagagttgtc |
475 |
Q |
| |
|
|||| ||||| | |||| |||| |||||||||||||||||||||||| ||||||| | |||| || | | |||||||||||||||||| |
|
|
| T |
28935144 |
tgaagtttgatgttccccaactcgaggtgttgaacttgtcacatacaagagttgacgatgaagcactcagtgtgatttcaaagagttgtc |
28935055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 6423312 - 6423260
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagtt |
438 |
Q |
| |
|
|||||||| ||| |||||| ||||||||||||||||||||| ||||| ||||| |
|
|
| T |
6423312 |
tgaacttttaagttcccaagctggaggtgttgaacttgtcaaatacaagagtt |
6423260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 431
Target Start/End: Complemental strand, 7119295 - 7119207
Alignment:
| Q |
343 |
catttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacatac |
431 |
Q |
| |
|
|||||||||||||| ||||| |||| |||||| || | |||| ||||||||| | || | | ||||||||||||||||||||| |||| |
|
|
| T |
7119295 |
catttgaacttagcccactgttcaagagtgaagctacttggaatgaactttgttgttcaccagctggaggtgttgaacttgtcagatac |
7119207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 431
Target Start/End: Complemental strand, 7131773 - 7131685
Alignment:
| Q |
343 |
catttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacatac |
431 |
Q |
| |
|
|||||||||||||| ||||| |||| |||||| || | |||| ||||||||| | || | | ||||||||||||||||||||| |||| |
|
|
| T |
7131773 |
catttgaacttagcccactgttcaagagtgaagctacttggaatgaactttgttgttcgccagctggaggtgttgaacttgtcagatac |
7131685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 432
Target Start/End: Complemental strand, 9411456 - 9411404
Alignment:
| Q |
380 |
atggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
||||| |||||||||| | |||||| ||||||||||||||||||||| ||||| |
|
|
| T |
9411456 |
atggattgaactttgaggttcccaagctggaggtgttgaacttgtcatataca |
9411404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 6403016 - 6402910
Alignment:
| Q |
325 |
agatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgt |
424 |
Q |
| |
|
||||||||||| ||||||||||||||||| || || |||| |||||| || | |||| | ||||||| || |||| |||| || ||||||||||||| |
|
|
| T |
6403016 |
agatgttgtaacattaggcatttgaacttaactgggtgttcaagagtgaagctacttggaataaactttgcagttccccaactagaagtgttgaacttgt |
6402917 |
T |
 |
| Q |
425 |
cacatac |
431 |
Q |
| |
|
|| |||| |
|
|
| T |
6402916 |
cagatac |
6402910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 28029057 - 28029103
Alignment:
| Q |
165 |
catgttattggttcattctggtacctcttcggtctagaggcgagtaa |
211 |
Q |
| |
|
|||||| ||||||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
28029057 |
catgttgttggttcatgctggtacctctttggtctagaggtgagtaa |
28029103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 12102724 - 12102683
Alignment:
| Q |
97 |
cgggctcactttcgagtcattttgggcaaatcacataataat |
138 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||| |||| |
|
|
| T |
12102724 |
cgggctcacttttgagttattttgggcaaatcacatattaat |
12102683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 6594588 - 6594656
Alignment:
| Q |
364 |
tcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
|||| |||||| || |||||| | |||||| || ||||||||||||||||||| |||||||| ||||| |
|
|
| T |
6594588 |
tcaagagtgaagctacatggaataaactttttagttcccaaactggaggtgttgtacttgtcaaataca |
6594656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 432
Target Start/End: Original strand, 51113724 - 51113831
Alignment:
| Q |
325 |
agatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgt |
424 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||| |||| |||||| |||| || | |||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
51113724 |
agatgttgtaaaattaggcatttgaaattagcttactgttcaaaactgaagctacttggaatgaactttgaagctcccaaactggaggtgttagacttgt |
51113823 |
T |
 |
| Q |
425 |
cacataca |
432 |
Q |
| |
|
|| ||||| |
|
|
| T |
51113824 |
caaataca |
51113831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 364 - 480
Target Start/End: Original strand, 51120875 - 51120991
Alignment:
| Q |
364 |
tcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaacgctatctgattt |
463 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||| || |||| ||||||||||||||||||| |||||| |||||||| | ||| ||| ||| | || | |
|
|
| T |
51120875 |
tcaagagtgaaactgcatggaatgaactttgaagttctcaaattggaggtgttgaacttgtcgcatacaagagttgatgatgaaaaactatatgtaatct |
51120974 |
T |
 |
| Q |
464 |
caaagagttgtcgtggg |
480 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
51120975 |
caaagagttgtcgtggg |
51120991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 432
Target Start/End: Original strand, 13470677 - 13470782
Alignment:
| Q |
327 |
atgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
||||||||| ||||||||||||||||||| | || ||||||||| || | |||| ||||||||| | |||||| ||||||||||||||||||||| |
|
|
| T |
13470677 |
atgttgtaagattaggcatttgaacttagcctattgtaaaaaagtgaagctacttggaatgaactttgttgttcccaatctggaggtgttgaacttgtca |
13470776 |
T |
 |
| Q |
427 |
cataca |
432 |
Q |
| |
|
||||| |
|
|
| T |
13470777 |
aataca |
13470782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 440
Target Start/End: Complemental strand, 1657346 - 1657292
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttga |
440 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
1657346 |
tgaactttgaagttcccaaactggaggtgttggacttgtcatttacaagagttga |
1657292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 443
Target Start/End: Original strand, 27005791 - 27005833
Alignment:
| Q |
401 |
ccaaactggaggtgttgaacttgtcacatacatgagttgataa |
443 |
Q |
| |
|
||||||||||||| |||||||||||||||||| || ||||||| |
|
|
| T |
27005791 |
ccaaactggaggtcttgaacttgtcacatacaagaattgataa |
27005833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 36811038 - 36811088
Alignment:
| Q |
393 |
tgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgataa |
443 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| || || ||||||| |
|
|
| T |
36811038 |
tgaagcttccaaactggaggtgttgaacttgtcccattcaagaattgataa |
36811088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 514684 - 514720
Alignment:
| Q |
338 |
ttaggcatttgaacttagctcactgctcaaaagtgaa |
374 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
514684 |
ttaggcatttgaacttagcccactgctcaagagtgaa |
514720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 19468455 - 19468549
Alignment:
| Q |
338 |
ttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtcacataca |
432 |
Q |
| |
|
|||||||||| |||||||| ||||| |||| |||||| || | |||||||||||||| || |||||| |||||||||||||| |||||| ||||| |
|
|
| T |
19468455 |
ttaggcatttaaacttagcccactgttcaagagtgaatctacttggagtgaactttgtagttcccaagctggaggtgttgaagttgtcagataca |
19468549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 479
Target Start/End: Original strand, 41901542 - 41901632
Alignment:
| Q |
389 |
actttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaacgctatctgatttcaaagagttgtcgtgg |
479 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| ||||| ||||||| | |||| || ||| |||| |||||||||||| |||| |
|
|
| T |
41901542 |
actttgaagttcccaaactggaggtgttgaacttgtcatatacaaaagttgatgatgaagcactttatatgatctcaaagagttgttgtgg |
41901632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 480
Target Start/End: Complemental strand, 32267626 - 32267476
Alignment:
| Q |
327 |
atgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
||||||||| |||| |||||||||||| | || || |||| ||||||||| | | |||||||||||| ||||||| ||||||| |||||||||||| |
|
|
| T |
32267626 |
atgttgtaacattagacatttgaacttatcccagtgttcaacagtgaaactaga---aatgaactttgaagttcccaaattggaggtattgaacttgtca |
32267530 |
T |
 |
| Q |
427 |
catacatgagttgataacgaagaacgctatctgatttcaaagagttgtcgtggg |
480 |
Q |
| |
|
|| ||| ||||||| | |||| || ||| |||| |||||||||||| ||||| |
|
|
| T |
32267529 |
caaacaatagttgatgatgaagcactttatatgatctcaaagagttgttgtggg |
32267476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 32785776 - 32785831
Alignment:
| Q |
386 |
tgaactttgaagctcccaaactggaggtgttgaacttgtcacatacatgagttgat |
441 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||||||||||| || ||||| |
|
|
| T |
32785776 |
tgaactttaaagctcccaaactagaggtgttgaacttgtcacatacaagaattgat |
32785831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 480
Target Start/End: Original strand, 1037607 - 1037762
Alignment:
| Q |
325 |
agatgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgt |
424 |
Q |
| |
|
||||||||||| |||| |||||||| ||||| ||| |||| ||||||||| | | || | |||||| ||| ||| || | |||||||| ||||||| |
|
|
| T |
1037607 |
agatgttgtaaggttagacatttgaatttagcctactattcaagagtgaaactacttagaataaactttaaagttcctgaattagaggtgtttaacttgt |
1037706 |
T |
 |
| Q |
425 |
cacatacatgagttgataacgaagaacgctatctgatttcaaagagttgtcgtggg |
480 |
Q |
| |
|
|||||||||| |||||| | ||| || |||| |||| ||||||| |||| ||||| |
|
|
| T |
1037707 |
cacatacatgtgttgatgatgaaacactctatatgatctcaaagaattgttgtggg |
1037762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 10614747 - 10614643
Alignment:
| Q |
327 |
atgttgtaaacttaggcatttgaacttagctcactgctcaaaagtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
||||||||| ||||||||||||||||||| | || ||||||||| || | |||| ||||| ||| | |||||| ||||||||||||||||||||| |
|
|
| T |
10614747 |
atgttgtaagattaggcatttgaacttagcctattgtaaaaaagtgaagctacttggaatgaacgttgttgttcccaatctggaggtgttgaacttgtca |
10614648 |
T |
 |
| Q |
427 |
catac |
431 |
Q |
| |
|
|||| |
|
|
| T |
10614647 |
aatac |
10614643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 15092139 - 15092195
Alignment:
| Q |
370 |
gtgaaactgcatggagtgaactttgaagctcccaaactggaggtgttgaacttgtca |
426 |
Q |
| |
|
|||||||| |||||| ||||||||| || |||| | |||||||||||||| |||||| |
|
|
| T |
15092139 |
gtgaaactacatggaatgaactttgcagttcccgagctggaggtgttgaatttgtca |
15092195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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