View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9578_low_33 (Length: 265)
Name: NF9578_low_33
Description: NF9578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9578_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 46557634 - 46557382
Alignment:
| Q |
1 |
ctggaaagatctaggaatttctaacgatattctcctcccattcttcttcgtgatcaccttttatataccaaaattaaccttaaagcct---tgttcttaa |
97 |
Q |
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| T |
46557634 |
ctggaaagatctaggaatttctaacgatattctcctcccattcttcttcgtgatcaccttttatataccaaaattaaccttaaagcctccttgttcttaa |
46557535 |
T |
|
| Q |
98 |
ttagtaacctcctctctttctctttctaaacatcgctcttgtttcttttcacttcccaatggaagcaacagaaacaagacccgaactagtagttgttcaa |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46557534 |
ttagtaacctcctctctttctctttctaaacatcgctcttgtttcttttcacttcccaatggaagcaacagaaacaagacccgaactagtagttgttcaa |
46557435 |
T |
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| Q |
198 |
gaagcaccaccacctctaccaccagaagaacaacaattacaacctctcatgtg |
250 |
Q |
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| T |
46557434 |
gaagcaccaccacctctaccaccagaagaacaacaattacaacctctcatgtg |
46557382 |
T |
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