View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9581_low_16 (Length: 336)
Name: NF9581_low_16
Description: NF9581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9581_low_16 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 14984195 - 14984515
Alignment:
| Q |
1 |
tatcagaaattcaaaaggaccactttcccttaaaccacgtataaaagtccaatgtctaggtaaaagagaaatgactcagctgtgaacagcaatttgaatc |
100 |
Q |
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| T |
14984195 |
tatcagaaattcaaaaggaccactttccctcaaaccacgtataaaagtccaatgtctaggtaaaagagaaatgactcagctgtgaacagcaatttgaatc |
14984294 |
T |
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| Q |
101 |
tctgcaatcaatcctttatattttgcaatgttttgaaaaccagacaggttttgaaaaccagacagaatatcaaacctgcgagacttccggtcatggtaaa |
200 |
Q |
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| T |
14984295 |
tctgcaatcaatcctttatattttgcaatgttttgaaa------------------accagacagaatatcaaacctgcgagacttccggtcatggtaaa |
14984376 |
T |
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| Q |
201 |
attggggttcaa---tagttgaaccggatgacaaataaataaaaggtattaaaaaagtacagtaagaacatggaaaaacgattttgacagtgcagaagct |
297 |
Q |
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| T |
14984377 |
attggggttcaactatagttgaaccggatgacaaataaataaaaggtattaaaaaagtacagtaagaacatggaaaaacgattttgacagtgcagaagct |
14984476 |
T |
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| Q |
298 |
ttaaagattgtcagcattcccatatcagtacgttcagca |
336 |
Q |
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| T |
14984477 |
ttaaagattgtcagcattcccatatcagtacgttcagca |
14984515 |
T |
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