View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9581_low_22 (Length: 267)
Name: NF9581_low_22
Description: NF9581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9581_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 46039898 - 46040134
Alignment:
| Q |
18 |
agtgctaaacctcaaccagaattctaaattctcctcaagcaaaccatcaatttcgaagcggaatttcttttctaacagtgaaagggaatggtctttgtca |
117 |
Q |
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| T |
46039898 |
agtgctaaacctcaaccagaattctaaattctcctcaagcaaaccatcaatttcgaagcggaatttcttttctaacagtgaaagggaatggtctttgtca |
46039997 |
T |
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| Q |
118 |
atttgtctttctctcaccacaaaaaatcttgtctttccaattgatgacatatcgatatttcctgtgttttcaacatgttggtgttgatcttctaaagaag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46039998 |
atttgtctttctctcaccacaaaaaatcttgtctttccaattgatgacatatcgatatttcctgtgttttcaacatgttggtgttgatcttctaaagaag |
46040097 |
T |
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| Q |
218 |
tactagctatatctgaagctggaatttcagtaccctc |
254 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
46040098 |
tactagctatatctgaagctggaatttcagtaccctc |
46040134 |
T |
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