View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9581_low_37 (Length: 229)
Name: NF9581_low_37
Description: NF9581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9581_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 45787803 - 45787595
Alignment:
| Q |
13 |
cagagactgaaaattatatatacatctaaa-ttaaatcaagccctaaacctaaaccaattctaaattccaagaatcactttcttcagtcttgatagtttc |
111 |
Q |
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| T |
45787803 |
cagagactgaaaattatatatacatctaaaattaaatcaagccctaaacctaaaccaattctaaattccaagaatcactttcttcagtcttgatagtttc |
45787704 |
T |
|
| Q |
112 |
tactgaatacgatggatccatcatcttattcacgtaacaacaaatttcccagaccttcatcaatgagaaaacctcacctctacttcctcatcgctttcct |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45787703 |
tactgaatacgatggatccatcatcttattcacgtaacaacaaatttcccagaccttcatcaatgagaaaacctcacctctacttcctcatcgctttcct |
45787604 |
T |
|
| Q |
212 |
ctgtgctgc |
220 |
Q |
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||||||||| |
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| T |
45787603 |
ctgtgctgc |
45787595 |
T |
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