View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9581_low_9 (Length: 413)

Name: NF9581_low_9
Description: NF9581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9581_low_9
NF9581_low_9
[»] chr4 (35 HSPs)
chr4 (8-231)||(18443432-18443655)
chr4 (11-166)||(48029119-48029274)
chr4 (8-166)||(53569479-53569636)
chr4 (232-280)||(6246784-6246832)
chr4 (232-278)||(6247473-6247519)
chr4 (237-279)||(10421582-10421624)
chr4 (226-279)||(15481029-15481082)
chr4 (239-280)||(47377598-47377639)
chr4 (232-280)||(232049-232097)
chr4 (232-280)||(47376852-47376900)
chr4 (230-280)||(1014006-1014056)
chr4 (236-278)||(15481572-15481614)
chr4 (8-54)||(34104919-34104965)
chr4 (229-309)||(25655610-25655690)
chr4 (11-49)||(8081672-8081710)
chr4 (238-280)||(11680282-11680324)
chr4 (238-280)||(11688561-11688603)
chr4 (233-279)||(25370507-25370553)
chr4 (246-280)||(25970120-25970154)
chr4 (246-280)||(47326789-47326823)
chr4 (246-280)||(47341585-47341619)
chr4 (231-280)||(231435-231484)
chr4 (11-56)||(9690001-9690046)
chr4 (239-280)||(11417694-11417735)
chr4 (239-280)||(11417937-11417978)
chr4 (239-280)||(26611283-26611324)
chr4 (239-280)||(29651332-29651373)
chr4 (239-280)||(36865717-36865758)
chr4 (246-279)||(55514355-55514388)
chr4 (232-280)||(12590203-12590251)
chr4 (232-280)||(30808621-30808669)
chr4 (232-280)||(31807102-31807150)
chr4 (8-56)||(32348821-32348869)
chr4 (231-279)||(46765169-46765217)
chr4 (8-56)||(52619577-52619625)
[»] chr7 (30 HSPs)
chr7 (232-400)||(46756270-46756438)
chr7 (11-166)||(27724620-27724773)
chr7 (231-279)||(44909360-44909408)
chr7 (11-54)||(38488994-38489037)
chr7 (232-279)||(45887279-45887326)
chr7 (229-279)||(45887981-45888031)
chr7 (7-56)||(34103058-34103107)
chr7 (237-281)||(20890204-20890248)
chr7 (232-280)||(27599211-27599259)
chr7 (232-280)||(27600095-27600143)
chr7 (229-280)||(41194510-41194561)
chr7 (232-279)||(41533896-41533943)
chr7 (246-280)||(24995866-24995900)
chr7 (246-280)||(24996683-24996717)
chr7 (11-69)||(33822038-33822096)
chr7 (230-280)||(38778852-38778902)
chr7 (239-280)||(668186-668227)
chr7 (246-275)||(6730162-6730191)
chr7 (239-280)||(7677809-7677850)
chr7 (239-280)||(17145629-17145670)
chr7 (232-281)||(20896037-20896086)
chr7 (230-279)||(24322420-24322469)
chr7 (239-280)||(37468917-37468958)
chr7 (239-280)||(37469005-37469046)
chr7 (239-280)||(38779563-38779604)
chr7 (232-280)||(5487382-5487430)
chr7 (246-274)||(9122664-9122692)
chr7 (12-40)||(26855308-26855336)
chr7 (8-56)||(30802287-30802335)
chr7 (239-279)||(47331954-47331994)
[»] chr2 (26 HSPs)
chr2 (232-400)||(41985772-41985940)
chr2 (8-158)||(33570834-33570984)
chr2 (11-133)||(6822918-6823038)
chr2 (8-163)||(45126265-45126421)
chr2 (229-280)||(36390954-36391005)
chr2 (11-56)||(7300257-7300302)
chr2 (11-56)||(11195930-11195975)
chr2 (239-280)||(30545435-30545476)
chr2 (11-56)||(31265804-31265849)
chr2 (231-280)||(37545675-37545724)
chr2 (232-279)||(4975696-4975743)
chr2 (229-280)||(21471014-21471065)
chr2 (248-278)||(15602822-15602852)
chr2 (231-280)||(24383062-24383112)
chr2 (11-53)||(34833078-34833120)
chr2 (230-280)||(38740442-38740491)
chr2 (246-280)||(41519925-41519959)
chr2 (239-280)||(14573268-14573309)
chr2 (239-280)||(21471954-21471995)
chr2 (239-280)||(30544734-30544775)
chr2 (239-268)||(44154283-44154312)
chr2 (239-268)||(44154994-44155023)
chr2 (12-40)||(144541-144569)
chr2 (232-280)||(33433160-33433208)
chr2 (232-280)||(37546564-37546612)
chr2 (231-279)||(41984726-41984774)
[»] chr6 (16 HSPs)
chr6 (262-400)||(26471496-26471634)
chr6 (232-280)||(24125972-24126020)
chr6 (8-56)||(31706350-31706398)
chr6 (232-280)||(24126718-24126766)
chr6 (231-280)||(33018416-33018465)
chr6 (239-278)||(27763420-27763459)
chr6 (226-280)||(7193332-7193386)
chr6 (239-280)||(3542821-3542862)
chr6 (239-280)||(3543063-3543104)
chr6 (231-280)||(10608320-10608369)
chr6 (8-69)||(14497706-14497767)
chr6 (239-280)||(22582479-22582520)
chr6 (239-280)||(22587310-22587351)
chr6 (230-267)||(22856348-22856385)
chr6 (239-280)||(33479703-33479744)
chr6 (239-280)||(33480628-33480669)
[»] chr3 (17 HSPs)
chr3 (8-163)||(14306744-14306899)
chr3 (11-166)||(46249373-46249528)
chr3 (231-279)||(38337478-38337526)
chr3 (9-166)||(5789995-5790153)
chr3 (82-166)||(16297670-16297754)
chr3 (232-272)||(42108370-42108410)
chr3 (232-279)||(38336944-38336991)
chr3 (8-56)||(4963943-4963991)
chr3 (232-299)||(40820490-40820557)
chr3 (239-280)||(19132812-19132853)
chr3 (11-56)||(34828998-34829043)
chr3 (232-299)||(40819701-40819768)
chr3 (230-280)||(36750437-36750487)
chr3 (8-74)||(48743965-48744031)
chr3 (12-53)||(55366195-55366236)
chr3 (8-56)||(31770180-31770228)
chr3 (246-278)||(33968195-33968227)
[»] chr5 (26 HSPs)
chr5 (11-158)||(14055155-14055303)
chr5 (9-166)||(13735402-13735561)
chr5 (230-279)||(9142045-9142094)
chr5 (246-279)||(26712389-26712422)
chr5 (246-279)||(26982127-26982160)
chr5 (8-56)||(379492-379540)
chr5 (8-56)||(22179492-22179540)
chr5 (232-279)||(2319266-2319313)
chr5 (232-279)||(4555390-4555437)
chr5 (100-163)||(10032814-10032877)
chr5 (229-279)||(2319968-2320018)
chr5 (246-280)||(4789534-4789568)
chr5 (230-280)||(8204118-8204168)
chr5 (230-280)||(16689591-16689641)
chr5 (229-278)||(4820451-4820500)
chr5 (239-280)||(15184017-15184058)
chr5 (11-56)||(18718464-18718509)
chr5 (239-280)||(33002816-33002857)
chr5 (232-272)||(473052-473092)
chr5 (232-280)||(4301905-4301953)
chr5 (12-40)||(5100154-5100182)
chr5 (8-56)||(5909576-5909624)
chr5 (11-43)||(21368432-21368464)
chr5 (231-279)||(26268343-26268391)
chr5 (239-279)||(39950411-39950451)
chr5 (246-278)||(42651581-42651613)
[»] chr8 (22 HSPs)
chr8 (41-166)||(9068939-9069065)
chr8 (232-280)||(43925018-43925066)
chr8 (231-278)||(12350656-12350703)
chr8 (232-279)||(43924490-43924537)
chr8 (232-274)||(12349967-12350009)
chr8 (11-56)||(9510375-9510420)
chr8 (11-56)||(6244728-6244773)
chr8 (229-281)||(4364036-4364088)
chr8 (229-280)||(61451-61502)
chr8 (8-43)||(9492271-9492306)
chr8 (238-273)||(11676979-11677014)
chr8 (9-56)||(15438748-15438795)
chr8 (9-56)||(15530052-15530099)
chr8 (232-279)||(32574809-32574856)
chr8 (237-280)||(37639716-37639759)
chr8 (246-280)||(35840530-35840564)
chr8 (246-280)||(35943090-35943124)
chr8 (11-53)||(42240404-42240446)
chr8 (239-280)||(34992264-34992305)
chr8 (231-280)||(40450986-40451035)
chr8 (239-280)||(41859317-41859358)
chr8 (232-280)||(1365829-1365877)
[»] chr1 (13 HSPs)
chr1 (232-279)||(11469081-11469128)
chr1 (232-279)||(14924674-14924721)
chr1 (232-279)||(14925343-14925390)
chr1 (231-280)||(45922231-45922280)
chr1 (246-299)||(46134598-46134651)
chr1 (102-166)||(18959658-18959722)
chr1 (232-279)||(31787478-31787525)
chr1 (229-280)||(51974434-51974485)
chr1 (231-280)||(1012546-1012595)
chr1 (239-280)||(16270214-16270255)
chr1 (239-280)||(23440865-23440906)
chr1 (231-280)||(51987826-51987875)
chr1 (11-40)||(52028279-52028308)
[»] scaffold0189 (2 HSPs)
scaffold0189 (232-280)||(12859-12907)
scaffold0189 (232-278)||(12184-12230)
[»] scaffold0314 (1 HSPs)
scaffold0314 (17-74)||(18369-18425)
[»] scaffold0311 (1 HSPs)
scaffold0311 (239-280)||(160-201)
[»] scaffold0057 (1 HSPs)
scaffold0057 (11-56)||(3449-3494)


Alignment Details
Target: chr4 (Bit Score: 159; Significance: 2e-84; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 18443432 - 18443655
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctgg 107  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  18443432 cagaaatggtggtcgaaccctttactttgtttgagtatcgactgaccttgttaccgtaattactttgttaaacagttgtttttcggggtggtttctctgg 18443531  T
Q  108 tacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttcttnnnnnnntacaaaacttttggtttggtagtaaaaccttctt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        ||||||||  |||||||||||||||||||||||    
T  18443532 tacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttgatttcttaaaaaaaaacaaaactaatggtttggtagtaaaaccttctt 18443631  T
Q  208 caatacaagtaacatttcctctta 231  Q
    ||| ||||||||||||||||||||    
T  18443632 caaaacaagtaacatttcctctta 18443655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 48029274 - 48029119
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctggtac 110  Q
    |||||||||||||||| ||| ||||||||| ||||| ||||||||| |||||||||| | |||| ||||||||| || |||||||||  ||||||| |||    
T  48029274 agatggtggtcggaccatttgttttgtttgggtatcaactgacctttttactgtaatcattttgttaaacaattcttgttcggggtgaattctctgatac 48029175  T
Q  111 atcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttctt 166  Q
    ||||||||||||| | |||||||||||||||| |||||||| |||||| |||||||    
T  48029174 atcttgtactgagaatttttcatcgccgctgttaatatatatcattttgatttctt 48029119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 53569636 - 53569479
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctgg 107  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||| || ||||||||||||||||| |||||  || ||||||| | ||  |||||||     
T  53569636 cagagatggtggtcggaccctttactttgtttgggtatcaactgacatttttactgtaattactttgttaaacggttctttttcgagatgaattctctga 53569537  T
Q  108 tacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttctt 166  Q
    ||||||||||||||| |||||| ||||||| |||  ||||||||||||||| |||||||    
T  53569536 tacatcttgtactga-gaatttacatcgccactgataatatataccattttgatttctt 53569479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 6246784 - 6246832
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6246784 ggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaagt 6246832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 6247519 - 6247473
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaa 278  Q
    |||||||||||||||||||||||||||||||||| || |||||||||    
T  6247519 ggtggcgtttaatttgggaaagggaagttgtttctcatcatgggaaa 6247473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 10421624 - 10421582
Alignment:
Q  237 cgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  10421624 cgtttaatttgggaaagggaagttgttttccaccatgggaaag 10421582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 15481029 - 15481082
Alignment:
Q  226 ctcttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||||||| ||||||||||||| |||||||||||||||||  ||||||||||    
T  15481029 ctcttaggtgacgtttaatttggggaagggaagttgtttcccgtcatgggaaag 15481082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 47377639 - 47377598
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  47377639 tttaatttgggaaaggggagttgtttcccaccatgggaaagt 47377598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 232097 - 232049
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  232097 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaagt 232049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 47376852 - 47376900
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagt 47376900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 280
Target Start/End: Complemental strand, 1014056 - 1014006
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| | ||||||||||| ||| ||||||||||||||||||||||||||    
T  1014056 taggtgacatttaatttgggtaagtgaagttgtttcccaccatgggaaagt 1014006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 15481614 - 15481572
Alignment:
Q  236 gcgtttaatttgggaaagggaagttgtttcccaccatgggaaa 278  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  15481614 gcgtttaatttgcgaaagggaagttgtttcccacaatgggaaa 15481572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 34104965 - 34104919
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacc 54  Q
    ||||||||||||||||||||||| || |||||| |||||||||||||    
T  34104965 cagagatggtggtcggaccctttgttatgtttgggtatcgactgacc 34104919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 25655690 - 25655610
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagtggactttttaccattagattttataggaa 309  Q
    |||||||| ||||||||||||||||   |||| |||||||||||||||||||    |||| |||||||||||  |||||||    
T  25655690 ttaggtggggtttaatttgggaaagactagttttttcccaccatgggaaagttagtttttgaccattagattaaataggaa 25655610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 8081710 - 8081672
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgac 49  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  8081710 agatggtggtcggacccattactttgtttgagtatcgac 8081672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 11680282 - 11680324
Alignment:
Q  238 gtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||||||  |||| |||||||||||||||||||    
T  11680282 gtttaatttgggaaaggttagttttttcccaccatgggaaagt 11680324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 11688561 - 11688603
Alignment:
Q  238 gtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||||||  |||| |||||||||||||||||||    
T  11688561 gtttaatttgggaaaggttagttttttcccaccatgggaaagt 11688603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 25370507 - 25370553
Alignment:
Q  233 gtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  25370507 gtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 25370553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Original strand, 25970120 - 25970154
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||| ||||||||||||||||||||||||    
T  25970120 tgggaaaggggagttgtttcccaccatgggaaagt 25970154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 47326823 - 47326789
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||| |||||||||||||||||||||||||    
T  47326823 tgggaaaggaaagttgtttcccaccatgggaaagt 47326789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 47341619 - 47341585
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||| |||||||||||||||||||||||||    
T  47341619 tgggaaaggaaagttgtttcccaccatgggaaagt 47341585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 231435 - 231484
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| ||||| | ||||||||||||||||||| | |||||||||||||    
T  231435 aggtggggtttagtatgggaaagggaagttgttttctaccatgggaaagt 231484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 9690046 - 9690001
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||| |||||||| |||||||| |||||||| ||||||    
T  9690046 agatggtggtcgaaccctttactttgtttgggtatcgaccgacctt 9690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 11417694 - 11417735
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  11417694 tttaatttgggaaaggagagttctttcccaccatgggaaagt 11417735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 11417978 - 11417937
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  11417978 tttaatttgggaaaggagagttctttcccaccatgggaaagt 11417937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 26611324 - 26611283
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  26611324 tttaatttgggaaaggagagttttttcccaccatgggaaagt 26611283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 29651373 - 29651332
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  29651373 tttaatttgggaaaggagagttctttcccaccatgggaaagt 29651332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 36865758 - 36865717
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  36865758 tttaatttgggaaaggagagttctttcccaccatgggaaagt 36865717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 279
Target Start/End: Complemental strand, 55514388 - 55514355
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||| ||||||||||||||||||||||||    
T  55514388 tgggaaaggaaagttgtttcccaccatgggaaag 55514355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 12590251 - 12590203
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||| |||||||||||||||||  |||| ||| |||||||||||||||    
T  12590251 ggtggggtttaatttgggaaaggctagtttttttccaccatgggaaagt 12590203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 30808621 - 30808669
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| |||||  |||||||||  ||||||||||||||||||||||||    
T  30808621 ggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagt 30808669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 31807150 - 31807102
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||| | |||||| ||| |||| |||||||||||||||||||    
T  31807150 ggtggcgtttagtctgggaatggggagttctttcccaccatgggaaagt 31807102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 32348821 - 32348869
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||||||||||||||| |||||  |||||||| ||||||||| |||||    
T  32348821 cagagatggtggtcggatcctttgatttgtttgggtatcgactaacctt 32348869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 46765217 - 46765169
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||| |||||||||||||||   |||| ||||||||||||||||||    
T  46765217 aggtggcatttaatttgggaaagactagttttttcccaccatgggaaag 46765169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 52619577 - 52619625
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||||||||||||||    |||||| |||||||||||||||    
T  52619577 cagagatggtggtcggacccttttcagtgtttgggtatcgactgacctt 52619625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 6e-81; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 46756270 - 46756438
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagtggactttttaccattagattttataggaacgctgatcttatcatagtccac 331  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  46756270 ggtggcgtttaatttgggaaagggaagttgttttccaccatggaaaagtggactttttaccattagattttataggaacgctgatcttatcatagtctac 46756369  T
Q  332 ctacaccatatatttatttcatattgtcttcaacctcattatcttcaaccccatgagattgaaattgat 400  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46756370 ctacaccatatatttatttcatattgtcttcaaccgcattatcttcaaccccatgagattgaaattgat 46756438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 27724620 - 27724773
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctggtac 110  Q
    |||||||||||||| |||||| |||||||| |||||||||||| || |||||||| |||  ||| |||||| || ||||||||||||   ||||| ||||    
T  27724620 agatggtggtcggatcctttactttgtttgggtatcgactgacttt-ttactgtacttatgttg-taaacatttctttttcggggtgaactctctagtac 27724717  T
Q  111 atcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttctt 166  Q
    ||||||||| |||   |||||| ||||||||| ||||||| ||||||| |||||||    
T  27724718 atcttgtacggagattttttcaccgccgctgttaatatattccattttgatttctt 27724773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 44909408 - 44909360
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  44909408 aggtgccgtttaatttgggaaaggtaagttttttcccaccatgggaaag 44909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 38488994 - 38489037
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacc 54  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  38488994 agatggtggtcagaccctttattatgtttgagtatcgactgacc 38489037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 45887279 - 45887326
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||    
T  45887279 ggtggcgtttaatttgggaaaggctagttttttcccaccatgggaaag 45887326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 45888031 - 45887981
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  45888031 ttaggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 45887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 34103107 - 34103058
Alignment:
Q  7 gcagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  34103107 gcagagatggtggtcggaccatttactttatttgggtatcgactgacctt 34103058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 20890204 - 20890248
Alignment:
Q  237 cgtttaatttgggaaagggaagttgtttcccaccatgggaaagtg 281  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||    
T  20890204 cgtttaatttgggaaaggacagttttttcccaccatgggaaagtg 20890248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 27599211 - 27599259
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| |||||  |||||||||| ||||||||||||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagt 27599259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 27600143 - 27600095
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| |||||  |||||||||| ||||||||||||||||||||||||    
T  27600143 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagt 27600095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 41194510 - 41194561
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  41194510 ttaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 41194561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 41533896 - 41533943
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||| |||||||||||||||||| ||||| ||| ||||||||||||||    
T  41533896 ggtgccgtttaatttgggaaaggtaagtttttttccaccatgggaaag 41533943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Original strand, 24995866 - 24995900
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||| ||||||||||||||||||||||||    
T  24995866 tgggaaaggggagttgtttcccaccatgggaaagt 24995900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 24996717 - 24996683
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||| ||||||||||||||||||||||||    
T  24996717 tgggaaaggggagttgtttcccaccatgggaaagt 24996683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 33822038 - 33822096
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaatta 69  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||| ||||  ||||||||    
T  33822038 agatggtagtcggaccctttgatttgtttgggtatcgactgaccgtgtttttgtaatta 33822096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 38778852 - 38778902
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  38778852 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 38778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 668186 - 668227
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  668186 tttaatttgggaaaggagagttctttcccaccatgggaaagt 668227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 275
Target Start/End: Complemental strand, 6730191 - 6730162
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatggg 275  Q
    ||||||||||||||||||||||||||||||    
T  6730191 tgggaaagggaagttgtttcccaccatggg 6730162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 7677850 - 7677809
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  7677850 tttaatttgggaaaggagagttctttcccaccatgggaaagt 7677809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 17145629 - 17145670
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  17145629 tttaatttgggaaaggagagttctttcccaccatgggaaagt 17145670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 20896086 - 20896037
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagtg 281  Q
    ||||||||||||||||||||||| || || ||||||| |||| |||||||    
T  20896086 ggtggcgtttaatttgggaaaggaaacttttttcccatcatgagaaagtg 20896037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 24322420 - 24322469
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||| ||||||||||||||||| || || ||||||| ||||||||||    
T  24322420 taggtggtgtttaatttgggaaaggaaacttttttcccatcatgggaaag 24322469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 37468917 - 37468958
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  37468917 tttaatttgggaaaggagagttctttcccaccatgggaaagt 37468958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 37469046 - 37469005
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  37469046 tttaatttgggaaaggagagttctttcccaccatgggaaagt 37469005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 38779604 - 38779563
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  38779604 tttaatttgggaaaggagagttctttcccaccatgggaaagt 38779563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 5487430 - 5487382
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||  ||||||| ||||||| ||||||||||||| |||||    
T  5487430 ggtggcgtttaacctgggaaatggaagttctttcccaccatggaaaagt 5487382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 274
Target Start/End: Original strand, 9122664 - 9122692
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgg 274  Q
    |||||||||||||||||||||||||||||    
T  9122664 tgggaaagggaagttgtttcccaccatgg 9122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 26855336 - 26855308
Alignment:
Q  12 gatggtggtcggaccctttattttgtttg 40  Q
    |||||||||||||||||||||||||||||    
T  26855336 gatggtggtcggaccctttattttgtttg 26855308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 30802287 - 30802335
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||| ||||||||||||||||  |||||||| ||||||||| |||||    
T  30802287 cagagacggtggtcggaccctttgatttgtttgggtatcgactaacctt 30802335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 47331994 - 47331954
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  47331994 tttaatttgggaaaggctagttttttcccaccatgggaaag 47331954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 232 - 400
Target Start/End: Complemental strand, 41985940 - 41985772
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagtggactttttaccattagattttataggaacgctgatcttatcatagtccac 331  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||    
T  41985940 ggtggcgtttaatttgggaaagggaagttgttttccaccatgagaaagtggactttttaccattaaattttataagaacactgatcttatcatagtctac 41985841  T
Q  332 ctacaccatatatttatttcatattgtcttcaacctcattatcttcaaccccatgagattgaaattgat 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41985840 ctacaccatatatttatttcatattgtcttcaacctcattatcttcaaccccatgagattgaaattgat 41985772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 33570984 - 33570834
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctgg 107  Q
    |||||||||| |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||| ||| |  ||  |||||||||||  ||| | |||||     
T  33570984 cagagatggttgtcaaaccctttactttgtttgggtatcgactgaccttattattgtaattacattgtttgacttttgtttttcggtatggatcctctga 33570885  T
Q  108 tacatcttgtactgaggaattttcatcgccgctgtgaatatataccatttt 158  Q
    |||| ||||||||||||| |||||||||||||||| ||||||| |||||||    
T  33570884 tacaccttgtactgaggagttttcatcgccgctgttaatatattccatttt 33570834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 133
Target Start/End: Complemental strand, 6823038 - 6822918
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctggtac 110  Q
    |||||||||||| |||||||| |||||||| ||||||| ||||||| |||||||||| | |||| |||||| || || |||||||||   ||||| ||||    
T  6823038 agatggtggtcgaaccctttactttgtttgggtatcgattgacctt-ttactgtaatcattttg-taaacatttcttattcggggtgagctctctagtac 6822941  T
Q  111 atcttgtactgaggaattttcat 133  Q
    ||||||||||||| | |||||||    
T  6822940 atcttgtactgagaatttttcat 6822918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 45126421 - 45126265
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaac-aattgtttttcggggtggtttctctg 106  Q
    |||||||||||||| ||||||||| ||| |||| ||||||||||||| | ||  ||||||||| ||  |   |   ||| ||||| ||||| ||||||||    
T  45126421 cagagatggtggtcagaccctttactttatttgggtatcgactgacc-tattgatgtaattacattatttgtctgtttgcttttctgggtgttttctctg 45126323  T
Q  107 gtacatc-ttgtactgaggaattttcatcgccgctgtgaatatataccattttaattt 163  Q
    ||||| | |||||||||||| |||||||||||||||| |||||||  |||||| ||||    
T  45126322 gtacacctttgtactgaggagttttcatcgccgctgttaatatatttcattttgattt 45126265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 36390954 - 36391005
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||| |||||   |||||||||||||||||||||||||||||||||||    
T  36390954 ttaggtggggtttagcatgggaaagggaagttgtttcccaccatgggaaagt 36391005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 7300302 - 7300257
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||||||||||| || |||||| |||||||||||||||    
T  7300302 agatggtggtcggaccctttgttatgtttgggtatcgactgacctt 7300257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 11195975 - 11195930
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||    
T  11195975 agatggtggtcggaccctttattatgtctgagtatcgattgacctt 11195930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 30545476 - 30545435
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  30545476 tttaatttgggaaagggaagttgtttcccatgatgggaaagt 30545435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 31265849 - 31265804
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||    
T  31265849 agatggtggtcggaccctttactttgtttgggtatcaactgacctt 31265804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 37545675 - 37545724
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||| |||||  | |||||||||||||||||||||||||||||||||    
T  37545675 aggtggcatttaaaataggaaagggaagttgtttcccaccatgggaaagt 37545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 4975696 - 4975743
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||||| | |||||| |||||||||||||||||||||| ||||    
T  4975696 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaag 4975743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 21471014 - 21471065
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  21471014 ttaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 21471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 278
Target Start/End: Complemental strand, 15602852 - 15602822
Alignment:
Q  248 ggaaagggaagttgtttcccaccatgggaaa 278  Q
    |||||||||||||||||||||||||||||||    
T  15602852 ggaaagggaagttgtttcccaccatgggaaa 15602822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 24383112 - 24383062
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgttt-cccaccatgggaaagt 280  Q
    |||||| ||||| | ||||||||||||||||||| ||||||||||||||||    
T  24383112 aggtggggtttagtatgggaaagggaagttgtttccccaccatgggaaagt 24383062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 34833078 - 34833120
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgac 53  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||    
T  34833078 agatggtggtcggacccgttactttgtttgggtatcgactgac 34833120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 38740442 - 38740491
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||| | |||||||||| |||| |||||||||||||||||||    
T  38740442 taggtggcgtttagtctgggaaaggggagtt-tttcccaccatgggaaagt 38740491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 41519959 - 41519925
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||| |||||||||||||||||||    
T  41519959 tgggaaagggaagttttttcccaccatgggaaagt 41519925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 14573268 - 14573309
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  14573268 tttaatttgggaaaggagagttttttcccaccatgggaaagt 14573309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 21471995 - 21471954
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  21471995 tttaatttgggaaaggagagttctttcccaccatgggaaagt 21471954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 30544734 - 30544775
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||| |||||||||||||||  ||||||||||    
T  30544734 tttaatttgggaaatggaagttgtttcccatgatgggaaagt 30544775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 44154283 - 44154312
Alignment:
Q  239 tttaatttgggaaagggaagttgtttccca 268  Q
    ||||||||||||||||||||||||||||||    
T  44154283 tttaatttgggaaagggaagttgtttccca 44154312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 44155023 - 44154994
Alignment:
Q  239 tttaatttgggaaagggaagttgtttccca 268  Q
    ||||||||||||||||||||||||||||||    
T  44155023 tttaatttgggaaagggaagttgtttccca 44154994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 144541 - 144569
Alignment:
Q  12 gatggtggtcggaccctttattttgtttg 40  Q
    |||||||||||||||||||||||||||||    
T  144541 gatggtggtcggaccctttattttgtttg 144569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 33433208 - 33433160
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||| ||||||||||| ||||||  |||| |||||||||||||||||||    
T  33433208 ggtgccgtttaatttgagaaaggagagttctttcccaccatgggaaagt 33433160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 37546612 - 37546564
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| |||||  |||||||||| |||||||||||| |||||||||||    
T  37546612 ggtggcatttaaaatgggaaaggggagttgtttcccatcatgggaaagt 37546564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 41984726 - 41984774
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||| ||||||||||||||||  |||| |||| |||||||||||||    
T  41984726 aggtggcatttaatttgggaaaggctagttttttctcaccatgggaaag 41984774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 7e-56; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 262 - 400
Target Start/End: Complemental strand, 26471634 - 26471496
Alignment:
Q  262 tttcccaccatgggaaagtggactttttaccattagattttataggaacgctgatcttatcatagtccacctacaccatatatttatttcatattgtctt 361  Q
    |||||||  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  26471634 tttcccattatgggaaagtggactttttaccattaaattttgtaggaacactgatcttatcatagtctacctacaccatatatttatttcatactgtctt 26471535  T
Q  362 caacctcattatcttcaaccccatgagattgaaattgat 400  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26471534 caacctcattatcttcaaccccatgagattgaaattgat 26471496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 24125972 - 24126020
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaagt 24126020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 31706398 - 31706350
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  31706398 cagagatggtggtcggaccttttaatttgtttgagtatcgactgacctt 31706350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 24126766 - 24126718
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  24126766 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagt 24126718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 33018465 - 33018416
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||    
T  33018465 aggtgtcgtttaatttgggaaaggagagttctttcccaccatgggaaagt 33018416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 27763420 - 27763459
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaa 278  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  27763420 tttaatttggggaagggaagttgtttcccaccaagggaaa 27763459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 7193332 - 7193386
Alignment:
Q  226 ctcttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||| ||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  7193332 ctctcaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 7193386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 3542821 - 3542862
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  3542821 tttaatttgggaaaggagagttttttcccaccatgggaaagt 3542862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 3543104 - 3543063
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  3543104 tttaatttgggaaaggagagttttttcccaccatgggaaagt 3543063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 10608369 - 10608320
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| |||||||||||||||||   ||| |||||||||||||||||||    
T  10608369 aggtggggtttaatttgggaaaggctggttttttcccaccatgggaaagt 10608320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 14497767 - 14497706
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaatta 69  Q
    |||||||||||||  ||  ||||||||||| || |||| |||||||||||||| ||||||||    
T  14497767 cagagatggtggttagattctttattttgtctgggtattgactgaccttgttattgtaatta 14497706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 22582520 - 22582479
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  22582520 tttaatttgggaaaggagagttctttcccaccatgggaaagt 22582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 22587351 - 22587310
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  22587351 tttaatttgggaaaggagagttctttcccaccatgggaaagt 22587310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 22856348 - 22856385
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttccc 267  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  22856348 taggtgccgtttaatttgggaaagggaagttctttccc 22856385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 33479703 - 33479744
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  33479703 tttaatttgggaaaggagagttatttcccaccatgggaaagt 33479744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 33480669 - 33480628
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  33480669 tttaatttgggaaaggagagttctttcccaccatgggaaagt 33480628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 9e-40; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 14306899 - 14306744
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctgg 107  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||  ||||||||||| |||||| || ||||||||||||  |||||| |    
T  14306899 cagagatggtggtcgaaccctttattttgtttgggtatcgactgacctttttaccataattactttgttaaacagttctttttcggggtgagttctctag 14306800  T
Q  108 tacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttaattt 163  Q
    ||||||||||||| || ||||| ||| |||||| | ||||||||||||||| ||||    
T  14306799 tacatcttgtactaagaaatttacattgccgcttttaatatataccattttgattt 14306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 46249373 - 46249528
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctggtac 110  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| | | |||| ||||||||| || ||  |||||  |||||| ||||    
T  46249373 agatggtggtcggaccctttactttgtttgggtatcgactgacctttttaccgtactcattttgttaaacaattcttgttgagggtgagttctctagtac 46249472  T
Q  111 atcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttctt 166  Q
    |||||||| |||| ||||||||| |||||||| |||||||| |||||| |||||||    
T  46249473 atcttgtattgagaaattttcattgccgctgttaatatatatcattttgatttctt 46249528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 38337526 - 38337478
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38337526 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 38337478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 166
Target Start/End: Original strand, 5789995 - 5790153
Alignment:
Q  9 agagatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaac-aattgtttttcggggtggtttctctgg 107  Q
    |||||||||||| |||||||||| ||||| || |||| |||||||||| ||| ||||||||  ||| |  ||   |||||||||||| ||| ||||  ||    
T  5789995 agagatggtggttggaccctttactttgtctgggtattgactgacctttttattgtaattaaattgtttgacgggttgtttttcgggatggattcttagg 5790094  T
Q  108 tacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttctt 166  Q
    |||| ||||||||||||| | | || | ||||||| ||||||| ||||||| |||||||    
T  5790095 tacaccttgtactgaggactctccaccaccgctgttaatatatcccattttgatttctt 5790153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 16297670 - 16297754
Alignment:
Q  82 attgtttttcggggtggtttctctggtacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttctt 166  Q
    ||||||||||||| ||| ||||  |||||| |||| ||||| |||| |||||||||||||| ||||||| ||||||| |||||||    
T  16297670 attgtttttcgggatggattcttaggtacaccttgaactgacgaatcttcatcgccgctgttaatatattccattttgatttctt 16297754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 42108370 - 42108410
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42108370 ggtggcgtttaatttgggaaagggaagttgtttcccaccat 42108410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 38336944 - 38336991
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  38336944 ggtggcatttaatttggggaagggaagttgtttcccaccatgggaaag 38336991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 4963991 - 4963943
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||||    
T  4963991 cagagatggtggtcggaccctttactttgtctgggtatcgactgacctt 4963943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 40820557 - 40820490
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagtggactttttaccattagat 299  Q
    ||||||||||||| ||||  || |||||| ||||||||||||||||||| ||  ||||||||||||||    
T  40820557 ggtggcgtttaatatggggcagtgaagttttttcccaccatgggaaagttgatattttaccattagat 40820490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 19132853 - 19132812
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  19132853 tttaatttgggaaaggaaagttctttcccaccatgggaaagt 19132812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 34829043 - 34828998
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||    
T  34829043 agatggtggtcgaaccctttattatgtttgagtatcgattgacctt 34828998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 40819701 - 40819768
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagtggactttttaccattagat 299  Q
    |||||| |||||| |||| ||| |||||| ||| ||| ||||||||||| || |||||||||||||||    
T  40819701 ggtggcatttaatatggggaagtgaagttattttccatcatgggaaagttgattttttaccattagat 40819768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Complemental strand, 36750487 - 36750437
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  36750487 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 36750437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 48743965 - 48744031
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttg 74  Q
    |||||||||||||||||||||||| ||||  ||  |||||||||||||| ||  |||||||| ||||    
T  48743965 cagagatggtggtcggaccctttactttgcctggttatcgactgaccttttttttgtaattaatttg 48744031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 55366236 - 55366195
Alignment:
Q  12 gatggtggtcggaccctttattttgtttgagtatcgactgac 53  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  55366236 gatggtggtcggacccgttactttgtttgggtatcgactgac 55366195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 31770180 - 31770228
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||||||||||||||||||| | || |||||| || ||||||||||||    
T  31770180 cagagatggtggtcggaccctatgttgtgtttgggtttcgactgacctt 31770228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 33968195 - 33968227
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaa 278  Q
    |||||||||||| ||||||||||||||||||||    
T  33968195 tgggaaagggaacttgtttcccaccatgggaaa 33968227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 14055155 - 14055303
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttgctaaacaattgtttttcggggtggtttctctggtac 110  Q
    ||||||||| |||||||||||||||||||| |||| || ||||||| ||| ||||||||||||| |||||| || |||||| |||||  ||||||| |||    
T  14055155 agatggtggccggaccctttattttgtttgggtattgattgacctt-tta-tgtaattactttgttaaacagttctttttcagggtgagttctctgatac 14055252  T
Q  111 atcttgta---ctgaggaattttcatcgccgctgtgaatatataccatttt 158  Q
    ||||||||   || || |||| ||| ||||||||| |||||||||||||||    
T  14055253 atcttgtacttctaagaaattatcaccgccgctgttaatatataccatttt 14055303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 166
Target Start/End: Original strand, 13735402 - 13735561
Alignment:
Q  9 agagatggtggtcggaccctttattttgtttgagtatcgactgaccttgtt-actgtaattactttgctaaaca-attgtttttcggggtggtttctctg 106  Q
    |||||||||||||| |||||||| | |||||| |||| |||||||||| || | |||||||||  || |  | | |||||||||| |||||| |   |||    
T  13735402 agagatggtggtcgaaccctttactgtgtttgggtattgactgaccttttttattgtaattacagtgtttgagagattgtttttcagggtgggtgtcctg 13735501  T
Q  107 gtacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttctt 166  Q
    ||||| |||||||||||| |||||||  |||||||| ||||||| ||||||| |||||||    
T  13735502 gtacaccttgtactgaggcattttcactgccgctgttaatatattccattttgatttctt 13735561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 9142045 - 9142094
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  9142045 taggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 9142094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 279
Target Start/End: Complemental strand, 26712422 - 26712389
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||||||||||||||||||||||||||||    
T  26712422 tgggaaagggaagttgtttcccaccatgggaaag 26712389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 279
Target Start/End: Complemental strand, 26982160 - 26982127
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||||||||||||||||||||||||||||    
T  26982160 tgggaaagggaagttgtttcccaccatgggaaag 26982127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 379540 - 379492
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||| ||||||||||||||||| | ||||||| |||||||||||||||    
T  379540 cagagttggtggtcggaccctttgtattgtttgggtatcgactgacctt 379492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 22179492 - 22179540
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||| |||||||| |||| |||||||| |||||||||||||||    
T  22179492 cagagatggtagtcggaccatttaatttgtttgggtatcgactgacctt 22179540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 2319266 - 2319313
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  2319266 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 2319313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 4555437 - 4555390
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||| |||| | ||||||||||||||||||||| ||||||||||||    
T  4555437 ggtggcatttagtatgggaaagggaagttgtttcctaccatgggaaag 4555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 10032877 - 10032814
Alignment:
Q  100 ttctctggtacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttaattt 163  Q
    ||||| |||||| ||||| ||||| | |||||||||||||||| |||||||  |||||||||||    
T  10032877 ttctcgggtacaccttgtgctgagaagttttcatcgccgctgttaatatatctcattttaattt 10032814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 2320018 - 2319968
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||| ||||||||||||||||  |||| ||||||||||| ||||||    
T  2320018 ttaggtggcatttaatttgggaaaggctagttttttcccaccataggaaag 2319968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Original strand, 4789534 - 4789568
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||| ||||||||||||||||||||||||    
T  4789534 tgggaaaggggagttgtttcccaccatgggaaagt 4789568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 8204118 - 8204168
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  8204118 taggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 8204168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 16689591 - 16689641
Alignment:
Q  230 taggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||| ||||| | ||||||||||||||| ||||||||||||| |||||    
T  16689591 taggtggggtttagtatgggaaagggaagttctttcccaccatggaaaagt 16689641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 4820451 - 4820500
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaa 278  Q
    |||||||| ||||||  |||||||||||| |||||| |||||||||||||    
T  4820451 ttaggtggggtttaacatgggaaagggaaattgttttccaccatgggaaa 4820500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 15184058 - 15184017
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  15184058 tttaatttgggaaaggagagttctttcccaccatgggaaagt 15184017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 18718464 - 18718509
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||||| |||||||| |||||| ||||||| |||||||    
T  18718464 agatggtggtcggatcctttattatgtttgggtatcgattgacctt 18718509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 33002857 - 33002816
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  33002857 tttaatttgggaaaggagagttctttcccaccatgggaaagt 33002816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 473092 - 473052
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccat 272  Q
    |||||| |||||| |||||||||||||| ||||||||||||    
T  473092 ggtggcatttaatatgggaaagggaagtcgtttcccaccat 473052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 4301905 - 4301953
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||| ||||||| ||| ||||||||||| ||||||| |||||||||||    
T  4301905 ggtggggtttaatatggaaaagggaagttctttcccatcatgggaaagt 4301953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 5100154 - 5100182
Alignment:
Q  12 gatggtggtcggaccctttattttgtttg 40  Q
    |||||||||||||||||||||||||||||    
T  5100154 gatggtggtcggaccctttattttgtttg 5100182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 5909576 - 5909624
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||||||||||||||  |||||||| ||||| ||| |||||    
T  5909576 cagagatggtggtcggaccctttgatttgtttgggtatcaactaacctt 5909624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 21368432 - 21368464
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagt 43  Q
    |||||||||||||| ||||||||||||||||||    
T  21368432 agatggtggtcggatcctttattttgtttgagt 21368464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 26268343 - 26268391
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||| |||||||||||||| |  |||| ||||||||||||||||||    
T  26268343 aggtggcatttaatttgggaaatgttagttttttcccaccatgggaaag 26268391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 39950411 - 39950451
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  39950411 tttaatttgggaaaggagagttctttcccaccatgggaaag 39950451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 42651613 - 42651581
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaa 278  Q
    ||||||||||||||||||||||||||| |||||    
T  42651613 tgggaaagggaagttgtttcccaccataggaaa 42651581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 9068939 - 9069065
Alignment:
Q  41 agtatcgactgaccttgttactgtaattactttgctaaaca-attgtttttcggggtggtttctctggtacatcttgtactgaggaattttcatcgccgc 139  Q
    |||||||||||||||| |||||||||||||| || | |||| ||||||||||||||||| |   |||||||| |||||||||||| |||  ||  |||||    
T  9068939 agtatcgactgacctttttactgtaattactgtgtttaacatattgtttttcggggtgggtgtcctggtacaccttgtactgaggcattcccactgccgc 9069038  T
Q  140 tgtgaatatataccattttaatttctt 166  Q
    ||| ||||||| ||||||| |||||||    
T  9069039 tgttaatatattccattttgatttctt 9069065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 43925066 - 43925018
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43925066 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgagaaagt 43925018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 12350703 - 12350656
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaa 278  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12350703 aggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaa 12350656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 43924490 - 43924537
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  43924490 ggtggcatttaatttgggaaagggaagttgtttcccaccatgggaaag 43924537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 12349967 - 12350009
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgg 274  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12349967 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgg 12350009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 9510420 - 9510375
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  9510420 agatggtggtcggaccctttattatgtttgggtatcgactgacctt 9510375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 6244773 - 6244728
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||    
T  6244773 agatggtggtcagaccctttattatgtttgggtatcgactgacctt 6244728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 4364036 - 4364088
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagtg 281  Q
    |||||||| ||||||||||||||||| || || ||||||| ||||||||||||    
T  4364036 ttaggtggtgtttaatttgggaaaggaaacttttttcccatcatgggaaagtg 4364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 61451 - 61502
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||| ||||||||||||||||  | || |||||||||||||||||||    
T  61451 ttaggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 61502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 9492306 - 9492271
Alignment:
Q  8 cagagatggtggtcggaccctttattttgtttgagt 43  Q
    |||||||||||||||||||||||| |||||||||||    
T  9492306 cagagatggtggtcggaccctttagtttgtttgagt 9492271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 11676979 - 11677014
Alignment:
Q  238 gtttaatttgggaaagggaagttgtttcccaccatg 273  Q
    ||||||||||||||||||||||| ||||||||||||    
T  11676979 gtttaatttgggaaagggaagttctttcccaccatg 11677014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 15438795 - 15438748
Alignment:
Q  9 agagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||||||||||| |  |||||||| |||||||||||||||    
T  15438795 agagatggtggtcggaccctatgctttgtttgggtatcgactgacctt 15438748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 15530099 - 15530052
Alignment:
Q  9 agagatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    |||||||||||||||||||| |  |||||||| |||||||||||||||    
T  15530099 agagatggtggtcggaccctatgctttgtttgggtatcgactgacctt 15530052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 32574856 - 32574809
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||||||| |||||| | |||||||||||||||||||| ||||    
T  32574856 ggtggcgtttaatatgggaatgagaagttgtttcccaccatggtaaag 32574809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 37639716 - 37639759
Alignment:
Q  237 cgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||||  |||| |||||||||||||||||||    
T  37639716 cgtttaatttgggaaaggagagttctttcccaccatgggaaagt 37639759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 35840564 - 35840530
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||||||||||||| ||||||||||    
T  35840564 tgggaaagggaagttgtttcccacgatgggaaagt 35840530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 280
Target Start/End: Original strand, 35943090 - 35943124
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||||||||||||||||||| ||||    
T  35943090 tgggaaagggaagttgtttcccaccatggggaagt 35943124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 42240404 - 42240446
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgac 53  Q
    |||||||||| |||||| ||| |||||||||||||||||||||    
T  42240404 agatggtggttggacccgttactttgtttgagtatcgactgac 42240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 34992305 - 34992264
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  34992305 tttaatttgggaaaggagagttttttcccaccatgggaaagt 34992264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 40451035 - 40450986
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| ||||| | ||||||| | |||||||||||||||||||||||||    
T  40451035 aggtggggtttagtatgggaaatgtaagttgtttcccaccatgggaaagt 40450986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 41859317 - 41859358
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  41859317 tttaatttgggaaaggagagttctttcccaccatgggaaagt 41859358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 1365829 - 1365877
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| ||||||||||||||||  | || |||||||||||||||||||    
T  1365829 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 1365877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 11469081 - 11469128
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11469081 ggtggcgtttaatttaggaaagggaagttgtttcccaccatgggaaag 11469128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 14924674 - 14924721
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14924674 ggtggtgtttaatttgggaaagggaagttgtttcccaccatgggaaag 14924721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 14925390 - 14925343
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  14925390 ggtggcgtttaatttggggaaggaaagttgtttcccaccatgggaaag 14925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 45922231 - 45922280
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||| ||||||  ||||||||||| |||||||||||||||||||||||    
T  45922231 aggtggagtttaacatgggaaagggaggttgtttcccaccatgggaaagt 45922280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 46134651 - 46134598
Alignment:
Q  246 tgggaaagggaagttgtttcccaccatgggaaagtggactttttaccattagat 299  Q
    ||||||||||||||||||||||| |||||||||    |||||||||||||||||    
T  46134651 tgggaaagggaagttgtttcccatcatgggaaaacttactttttaccattagat 46134598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 18959722 - 18959658
Alignment:
Q  102 ctctggtacatcttgtactgaggaattttcatcgccgctgtgaatatataccattttaatttctt 166  Q
    ||||| |||| ||||||||||||| ||| |||||||| |||  |||||| |||||||||||||||    
T  18959722 ctctgatacaccttgtactgaggagtttccatcgccgttgttgatatatcccattttaatttctt 18959658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 31787478 - 31787525
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaag 279  Q
    ||||||||||| | |||||| |||||||||||||||||||||| ||||    
T  31787478 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaag 31787525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 51974434 - 51974485
Alignment:
Q  229 ttaggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  51974434 ttaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 51974485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 1012546 - 1012595
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||| ||||||||||||||||||  | || |||||||||||||||||||    
T  1012546 aggtgccgtttaatttgggaaaggagatttttttcccaccatgggaaagt 1012595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 16270214 - 16270255
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  16270214 tttaatttgggaaaggagagttctttcccaccatgggaaagt 16270255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 23440906 - 23440865
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  23440906 tttaatttgggaaaggagagttctttcccaccatgggaaagt 23440865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 51987826 - 51987875
Alignment:
Q  231 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||| ||||||||||||||||  | || |||||||||||||||||||    
T  51987826 aggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 51987875  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 40
Target Start/End: Complemental strand, 52028308 - 52028279
Alignment:
Q  11 agatggtggtcggaccctttattttgtttg 40  Q
    ||||||||||||||||||||||||||||||    
T  52028308 agatggtggtcggaccctttattttgtttg 52028279  T

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Target: scaffold0189 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 12907 - 12859
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  12907 ggtggcgtttaatttggggaagtgaagttgtttcccaccatgggaaagt 12859  T

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Target: scaffold0189; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 12184 - 12230
Alignment:
Q  232 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaa 278  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  12184 ggtggcgtttaatttgggaaagagaagttgtttcccaccatgagaaa 12230  T

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Target: scaffold0314 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 18425 - 18369
Alignment:
Q  17 tggtcggaccctttattttgtttgagtatcgactgaccttgttactgtaattactttg 74  Q
    ||||||||||||||| ||||| || ||||||||||||||| ||| |||||| ||||||    
T  18425 tggtcggaccctttactttgtctgggtatcgactgacctt-ttaatgtaataactttg 18369  T

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Target: scaffold0311 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 201 - 160
Alignment:
Q  239 tttaatttgggaaagggaagttgtttcccaccatgggaaagt 280  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  201 tttaatttgggaaaggagagttctttcccaccatgggaaagt 160  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 3449 - 3494
Alignment:
Q  11 agatggtggtcggaccctttattttgtttgagtatcgactgacctt 56  Q
    ||||||||||||||||| ||  |||||||| |||||||||||||||    
T  3449 agatggtggtcggacccgttgatttgtttgggtatcgactgacctt 3494  T

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