View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9584_low_10 (Length: 368)
Name: NF9584_low_10
Description: NF9584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9584_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 19 - 360
Target Start/End: Complemental strand, 48252008 - 48251667
Alignment:
| Q |
19 |
ctgatatgatttgtcagtgaattcattgactttagaatttcttcaatttctcattttcaagaaatactaatataaacgtgtataacataatgacgaatgt |
118 |
Q |
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| T |
48252008 |
ctgatatgatttgtcagtgaattcattgactttagaatttcttcaatttctcattttcaagaaatactaatataaacgtgtataacataatgacgaatgt |
48251909 |
T |
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| Q |
119 |
ttatgtatttggcctaccttaaacagaaggtatcggtacacaaaccatccggtgtaccctagtcctaccaactccataatctttggaagctgaaaccgaa |
218 |
Q |
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| T |
48251908 |
ttatgtatttggcctaccttaaacagaaggtatcggtacacaaaccatccggtgtaccctagtcctaccaactccataatctttggaagctgaaaccgaa |
48251809 |
T |
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| Q |
219 |
aatagaattgtttcagattggttcaaaacgcctaataagggaacttaaaaaagcaagagtgatatggcttaccaaggggactgagttgatggcaccaacg |
318 |
Q |
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| T |
48251808 |
aatagaattgtttcagattggttcaaaacgcctaataagggaacttaaaaaagcaagagtgatatggcttaccaaggggactgagttgatggcaccaacg |
48251709 |
T |
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| Q |
319 |
agaattgaagataaccaaacagcaactaaacctccaccacca |
360 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
48251708 |
agaattgaagataaccaaacagcaactaaacctccaccacca |
48251667 |
T |
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