View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9586_high_18 (Length: 227)
Name: NF9586_high_18
Description: NF9586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9586_high_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 33408766 - 33408555
Alignment:
| Q |
16 |
ataagaatataataatcttctcctttttcacagtattaaactttatacagaaccacctcaaaccatagtctcatctaattttgaaaatatgattgacctt |
115 |
Q |
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| T |
33408766 |
ataagaatataataatcttctcctttttcacagtattaaactttatacagaaccacctcaaaccatagtctcatctaattttgaaaatatgattgacctt |
33408667 |
T |
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| Q |
116 |
gagccatgacagttttgctcatatccacaagataatttacaataaccattacaacaattatcacaaccatgaatttaagagcaacctctctagtagtttc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33408666 |
gagccatgacagttttgctcatatccacaagataatttacaataaccattacaacaattatcacaaccatgaatttaagagcaacctctctagtagtttc |
33408567 |
T |
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| Q |
216 |
tacattattttc |
227 |
Q |
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||||| |||||| |
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| T |
33408566 |
tacatcattttc |
33408555 |
T |
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