View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9586_high_9 (Length: 269)
Name: NF9586_high_9
Description: NF9586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9586_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 29144920 - 29145171
Alignment:
| Q |
1 |
gtcactaacagttactcttctaagacaattgattccattctgaaaaggagattggttaagccaaattctgactcaattactccacatggttcaactagat |
100 |
Q |
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| T |
29144920 |
gtcactaacagttactcttctaagacgattgattccattctgaaaaggagattggttaagccaaattctgactcaattactccacatggttcaactagat |
29145019 |
T |
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| Q |
101 |
ctttgctcagcgacacaacttttttagatggctcttcagattatgattctagcttggtattaactaaggttgatgataaaaaggatcaagttgttggtca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29145020 |
ctttgctcagcgacacaacttttttagatggctcttcagattatgattctagcttggtattaactaaggttgatgataaaaaggatcaagttgttggtca |
29145119 |
T |
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| Q |
201 |
aaatgaagccaaccctgcatcgaaatcgagttcctcaagccaggttagtttt |
252 |
Q |
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|||||||||||||||||||||||||||| | ||||||||||||||||||||| |
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| T |
29145120 |
aaatgaagccaaccctgcatcgaaatcgggctcctcaagccaggttagtttt |
29145171 |
T |
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