View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9586_low_38 (Length: 227)
Name: NF9586_low_38
Description: NF9586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9586_low_38 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 3381538 - 3381334
Alignment:
| Q |
1 |
atcaacaagttcatatattcttgtccgatgagtttaaagatcttcatgatctaatcctacaaaagggttaacaaataaaatttgtagaactcccatcttc |
100 |
Q |
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| T |
3381538 |
atcaacaagttcatatattcttgtccgatgagtttaaagatcttcatgatctaatcctacaaaagggttaacaaataaaatttgtagaactcccatcttc |
3381439 |
T |
|
| Q |
101 |
atgagtatgtgtggtattcctaagaggtttcagtatatgacataatcgtttgggattcctgtatcatggtaatatgctttatgatctttcatggttctag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3381438 |
atgagtatgtgtggtattcctaagaggtttcagtatatgacataatcgtttgggattcctgtatcatggtaatatgctttatgatctttcatggttctag |
3381339 |
T |
|
| Q |
201 |
tctat |
205 |
Q |
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||||| |
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| T |
3381338 |
tctat |
3381334 |
T |
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