View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9586_low_40 (Length: 220)
Name: NF9586_low_40
Description: NF9586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9586_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 45889115 - 45889308
Alignment:
| Q |
18 |
agtttattaaatgaaatcacgatggatcacggattataatcta-----gacaattatttaacaagactttagagtcttatagtgtaaactcaaaatcata |
112 |
Q |
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| T |
45889115 |
agtttattaaatgaaatcacgatggatcacggattattatctaatcttgacaattatttaacaagactttagagtcttatagtgtaaactcaaaatcata |
45889214 |
T |
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| Q |
113 |
ataaatccgtaattttaacaaaaacaaaagttacattttataacttctactaaatcaaagccaccataatttttataatctcgcagtaacacca |
206 |
Q |
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| T |
45889215 |
ataaatccgtaattttaacaaaaacaaaagttacattttataacatctactaaatcaaagccaccataatttatataatctcgcagtaacacca |
45889308 |
T |
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