View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9587_low_11 (Length: 250)
Name: NF9587_low_11
Description: NF9587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9587_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 33431035 - 33430791
Alignment:
| Q |
1 |
aaatatttaatattttttgtgcatctttatttattgctcatatgatattggtgattgaatatttgcattgttttttgtagatgtttgctcaaaccttctt |
100 |
Q |
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| T |
33431035 |
aaatatttaatattttttgtgcatctttatttattgctcatatgatattggtgattgaatatttgcattgttttttgtagatgtttgctcaaaccttctt |
33430936 |
T |
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| Q |
101 |
tctattaaaaaattagactaaggtatgctatgatcgatgatgatgaggttgtcacttttatcatcagtctttatctaagcaatcagcatatataatctaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33430935 |
tctattaaaaaattagactaaggtatgctatgatcgatgatgatgaggttgtcacttttatcatcagtctttatctaagcaatcagcatatataatctaa |
33430836 |
T |
|
| Q |
201 |
agtggcatataagtaattaattataaattagttgtctctgcttct |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
33430835 |
agtggcatataagtaattaattataaattagttgtctctgattct |
33430791 |
T |
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