View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9587_low_7 (Length: 260)
Name: NF9587_low_7
Description: NF9587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9587_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 526120 - 526370
Alignment:
| Q |
1 |
ttccaccatgatcaatctttctcttataataaggtaccattttgtatgaatatgtcattttctgaaatagtgttaggatctcaataacatcaaaacttct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
526120 |
ttccaccatgatcaatctttctcttataataaggtaccattttgtatgaatatgtcattttctgaaatagtgttaggatctcaataacatcaaaacttct |
526219 |
T |
|
| Q |
101 |
tatcgaatgtgtgttccagtgtctaacaagagtcacaaaattttattgatattggcgtgtcggtgtccatatcgtgtattgtttgtgtgcttcttcacag |
200 |
Q |
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|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
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| T |
526220 |
tatcgaatgtgtgttccagtgtctgacaagtgtcacaaaattttattgatattggcgtgttggtgtccatattgtgtattgtttgtgtgcttcttcacag |
526319 |
T |
|
| Q |
201 |
gttatatataatcataataatgacaaccctttcactgtttcacagtataat |
251 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||| | |||||| |
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| T |
526320 |
gttatatataatcataataatgacaaccctttcactgtttcaaaatataat |
526370 |
T |
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