View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9590_2 (Length: 756)

Name: NF9590_2
Description: NF9590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9590_2
NF9590_2
[»] chr3 (50 HSPs)
chr3 (397-747)||(52706347-52706698)
chr3 (91-289)||(52706806-52707017)
chr3 (417-508)||(53227145-53227236)
chr3 (397-472)||(48946667-48946742)
chr3 (397-465)||(40503241-40503309)
chr3 (397-480)||(52254305-52254388)
chr3 (397-459)||(48085233-48085295)
chr3 (397-459)||(51676130-51676192)
chr3 (397-459)||(52857279-52857341)
chr3 (397-459)||(53228208-53228270)
chr3 (411-480)||(32305243-32305312)
chr3 (398-459)||(36174511-36174572)
chr3 (397-465)||(12739966-12740034)
chr3 (397-465)||(24242985-24243053)
chr3 (397-481)||(28919091-28919175)
chr3 (397-465)||(44712053-44712121)
chr3 (397-465)||(45940217-45940285)
chr3 (397-481)||(48082873-48082956)
chr3 (425-480)||(42541173-42541228)
chr3 (397-459)||(12739880-12739942)
chr3 (396-458)||(30359304-30359366)
chr3 (396-465)||(38731933-38732001)
chr3 (396-481)||(50530618-50530703)
chr3 (561-677)||(6032256-6032372)
chr3 (397-465)||(6098969-6099037)
chr3 (397-465)||(9242088-9242156)
chr3 (397-465)||(13355715-13355783)
chr3 (397-465)||(32304234-32304302)
chr3 (397-465)||(40503720-40503788)
chr3 (397-465)||(41263531-41263599)
chr3 (397-465)||(44475641-44475709)
chr3 (397-465)||(45940668-45940736)
chr3 (397-465)||(50531096-50531164)
chr3 (413-465)||(51675635-51675687)
chr3 (399-459)||(52255525-52255585)
chr3 (397-465)||(53246098-53246166)
chr3 (397-465)||(54831857-54831925)
chr3 (397-452)||(4953126-4953181)
chr3 (395-442)||(6276058-6276105)
chr3 (397-448)||(13301961-13302012)
chr3 (397-448)||(13312617-13312668)
chr3 (425-480)||(34817361-34817416)
chr3 (398-465)||(36877374-36877441)
chr3 (397-448)||(43464814-43464865)
chr3 (397-452)||(53227306-53227361)
chr3 (397-459)||(875969-876031)
chr3 (397-459)||(966982-967044)
chr3 (397-459)||(29191796-29191858)
chr3 (403-472)||(27990254-27990322)
chr3 (515-624)||(52719780-52719889)
[»] chr6 (26 HSPs)
chr6 (397-506)||(28866367-28866476)
chr6 (397-512)||(12586660-12586776)
chr6 (397-480)||(27128846-27128929)
chr6 (397-480)||(12261463-12261546)
chr6 (397-459)||(902747-902809)
chr6 (398-476)||(29435064-29435142)
chr6 (397-465)||(3366500-3366568)
chr6 (398-513)||(8850220-8850336)
chr6 (397-465)||(17383737-17383805)
chr6 (397-465)||(21271488-21271556)
chr6 (397-465)||(21272107-21272175)
chr6 (397-465)||(22498755-22498823)
chr6 (397-465)||(29175511-29175579)
chr6 (397-465)||(31739903-31739971)
chr6 (397-472)||(3366979-3367054)
chr6 (398-465)||(10914563-10914630)
chr6 (397-452)||(12586853-12586908)
chr6 (397-459)||(26392839-26392901)
chr6 (398-459)||(14527511-14527572)
chr6 (397-465)||(12260448-12260516)
chr6 (397-465)||(13703383-13703451)
chr6 (397-465)||(13839477-13839545)
chr6 (417-480)||(13204227-13204289)
chr6 (397-459)||(901420-901482)
chr6 (397-459)||(9424902-9424964)
chr6 (397-459)||(13839862-13839924)
[»] chr5 (51 HSPs)
chr5 (397-513)||(30644916-30645032)
chr5 (397-511)||(28904632-28904747)
chr5 (397-511)||(28941027-28941142)
chr5 (397-512)||(39547779-39547894)
chr5 (397-506)||(14348161-14348271)
chr5 (397-480)||(19798693-19798776)
chr5 (397-480)||(30645700-30645783)
chr5 (397-459)||(14347403-14347465)
chr5 (397-515)||(19797666-19797784)
chr5 (397-481)||(14233066-14233150)
chr5 (397-484)||(20243821-20243908)
chr5 (397-480)||(28905430-28905513)
chr5 (397-480)||(28941825-28941908)
chr5 (397-480)||(39548573-39548656)
chr5 (411-480)||(37192445-37192514)
chr5 (397-465)||(435556-435624)
chr5 (397-457)||(1031300-1031360)
chr5 (397-481)||(1095497-1095581)
chr5 (397-481)||(5187093-5187177)
chr5 (397-465)||(6793769-6793837)
chr5 (397-465)||(16670016-16670084)
chr5 (397-465)||(24042667-24042735)
chr5 (397-465)||(24100688-24100756)
chr5 (397-481)||(25586300-25586384)
chr5 (397-465)||(27850684-27850752)
chr5 (397-465)||(27851031-27851099)
chr5 (397-465)||(29962169-29962237)
chr5 (397-465)||(30012561-30012629)
chr5 (397-465)||(38312327-38312395)
chr5 (397-480)||(6794752-6794835)
chr5 (398-465)||(27098543-27098610)
chr5 (397-480)||(37191595-37191678)
chr5 (397-459)||(13668503-13668565)
chr5 (398-459)||(14348941-14349002)
chr5 (397-490)||(30112673-30112766)
chr5 (397-478)||(39023932-39024013)
chr5 (615-703)||(43197864-43197953)
chr5 (397-465)||(16669508-16669576)
chr5 (397-465)||(17339797-17339865)
chr5 (397-465)||(26888587-26888655)
chr5 (397-465)||(26888923-26888991)
chr5 (397-465)||(29961812-29961880)
chr5 (397-465)||(35774170-35774238)
chr5 (397-452)||(30645108-30645163)
chr5 (397-480)||(38385774-38385857)
chr5 (397-452)||(39547971-39548026)
chr5 (397-459)||(4077409-4077471)
chr5 (397-459)||(4959563-4959625)
chr5 (397-459)||(6157491-6157553)
chr5 (411-465)||(13824634-13824688)
chr5 (397-459)||(17420631-17420693)
[»] chr1 (80 HSPs)
chr1 (397-512)||(5804695-5804810)
chr1 (397-511)||(16659079-16659194)
chr1 (584-696)||(50403384-50403496)
chr1 (405-512)||(38657686-38657793)
chr1 (397-480)||(24326584-24326667)
chr1 (397-481)||(28049987-28050071)
chr1 (396-480)||(31697116-31697200)
chr1 (397-480)||(24332287-24332370)
chr1 (398-459)||(5805972-5806033)
chr1 (397-465)||(6137235-6137303)
chr1 (399-459)||(33171834-33171894)
chr1 (414-485)||(969132-969203)
chr1 (397-480)||(16659877-16659960)
chr1 (397-480)||(49652400-49652483)
chr1 (397-459)||(7964115-7964177)
chr1 (397-459)||(24231479-24231541)
chr1 (397-515)||(38658814-38658932)
chr1 (397-481)||(1039699-1039783)
chr1 (397-465)||(1040127-1040195)
chr1 (397-481)||(1046605-1046689)
chr1 (397-465)||(1047033-1047101)
chr1 (397-465)||(3798326-3798394)
chr1 (397-465)||(3798698-3798766)
chr1 (397-465)||(5598520-5598588)
chr1 (397-465)||(6328318-6328386)
chr1 (397-465)||(14244548-14244616)
chr1 (397-465)||(24370117-24370185)
chr1 (397-465)||(24381149-24381217)
chr1 (397-465)||(37483056-37483124)
chr1 (397-465)||(38980042-38980110)
chr1 (397-465)||(44114506-44114574)
chr1 (397-465)||(45678714-45678782)
chr1 (397-465)||(46448219-46448287)
chr1 (397-481)||(48984277-48984361)
chr1 (397-465)||(50138497-50138565)
chr1 (397-465)||(50138858-50138926)
chr1 (397-465)||(50227902-50227970)
chr1 (397-472)||(42617174-42617249)
chr1 (152-238)||(1109241-1109327)
chr1 (397-459)||(7965504-7965566)
chr1 (397-459)||(31488027-31488089)
chr1 (397-459)||(32322211-32322272)
chr1 (397-459)||(33171344-33171406)
chr1 (397-459)||(37483537-37483599)
chr1 (411-465)||(51241740-51241794)
chr1 (411-480)||(29021598-29021667)
chr1 (396-465)||(33784609-33784678)
chr1 (394-459)||(48498194-48498259)
chr1 (397-465)||(6714204-6714272)
chr1 (397-465)||(6714691-6714759)
chr1 (397-465)||(7334916-7334984)
chr1 (397-465)||(9478258-9478326)
chr1 (397-465)||(9478605-9478673)
chr1 (397-465)||(15073417-15073485)
chr1 (397-481)||(21507540-21507624)
chr1 (425-465)||(29022537-29022577)
chr1 (397-465)||(31488400-31488468)
chr1 (397-465)||(37708194-37708262)
chr1 (397-465)||(38979673-38979741)
chr1 (397-465)||(39851176-39851244)
chr1 (397-481)||(42616697-42616780)
chr1 (397-465)||(45678374-45678442)
chr1 (397-465)||(46448729-46448797)
chr1 (397-465)||(50227517-50227585)
chr1 (396-459)||(7121814-7121877)
chr1 (397-480)||(24508212-24508295)
chr1 (398-465)||(34023562-34023629)
chr1 (397-452)||(35814397-35814452)
chr1 (397-452)||(38657859-38657914)
chr1 (397-512)||(47113055-47113170)
chr1 (425-480)||(52750192-52750247)
chr1 (397-455)||(1524007-1524065)
chr1 (397-459)||(32193989-32194051)
chr1 (397-459)||(35368858-35368920)
chr1 (399-481)||(35968295-35968377)
chr1 (397-459)||(37708573-37708635)
chr1 (417-459)||(49964142-49964184)
chr1 (425-459)||(50124593-50124627)
chr1 (397-442)||(10719644-10719689)
chr1 (398-459)||(49548125-49548186)
[»] chr8 (58 HSPs)
chr8 (398-512)||(16905258-16905372)
chr8 (397-512)||(22595086-22595203)
chr8 (396-503)||(9317026-9317131)
chr8 (397-480)||(22594320-22594403)
chr8 (397-459)||(22323935-22323997)
chr8 (396-481)||(23017160-23017245)
chr8 (397-481)||(3443033-3443117)
chr8 (397-481)||(9115603-9115687)
chr8 (397-480)||(13462108-13462191)
chr8 (401-484)||(43273806-43273888)
chr8 (396-458)||(15271124-15271186)
chr8 (394-484)||(15271562-15271651)
chr8 (397-459)||(25825296-25825358)
chr8 (398-459)||(30864166-30864227)
chr8 (396-465)||(40229626-40229695)
chr8 (397-465)||(2221596-2221664)
chr8 (397-465)||(9739773-9739841)
chr8 (397-465)||(11713202-11713270)
chr8 (397-473)||(11760895-11760971)
chr8 (397-465)||(22013464-22013532)
chr8 (397-465)||(27786473-27786541)
chr8 (397-465)||(31445671-31445739)
chr8 (397-465)||(41154619-41154687)
chr8 (397-465)||(41155002-41155070)
chr8 (397-465)||(42193781-42193849)
chr8 (397-465)||(45123222-45123290)
chr8 (397-459)||(761395-761457)
chr8 (397-459)||(7116474-7116536)
chr8 (411-481)||(11174141-11174210)
chr8 (397-459)||(26060108-26060170)
chr8 (397-459)||(26060626-26060688)
chr8 (398-459)||(2221960-2222021)
chr8 (398-459)||(13089441-13089502)
chr8 (396-465)||(14724105-14724174)
chr8 (397-465)||(762159-762227)
chr8 (397-465)||(3444108-3444176)
chr8 (397-465)||(9807268-9807336)
chr8 (397-465)||(11713558-11713626)
chr8 (397-465)||(22013940-22014008)
chr8 (397-465)||(40229092-40229160)
chr8 (397-465)||(40449241-40449309)
chr8 (397-465)||(44553130-44553198)
chr8 (397-465)||(45466281-45466349)
chr8 (396-459)||(7812232-7812295)
chr8 (397-480)||(9116036-9116119)
chr8 (398-465)||(13364052-13364119)
chr8 (411-478)||(30865308-30865375)
chr8 (397-506)||(36179461-36179567)
chr8 (396-459)||(37035391-37035454)
chr8 (397-459)||(13463142-13463204)
chr8 (397-459)||(14897390-14897452)
chr8 (397-459)||(27785968-27786030)
chr8 (397-459)||(31988516-31988578)
chr8 (397-459)||(33098964-33099026)
chr8 (397-458)||(2087760-2087821)
chr8 (396-465)||(11760441-11760510)
chr8 (396-465)||(13094101-13094170)
chr8 (404-465)||(40448732-40448793)
[»] chr2 (54 HSPs)
chr2 (397-511)||(11129884-11129998)
chr2 (477-649)||(29076632-29076804)
chr2 (398-480)||(16329748-16329830)
chr2 (397-481)||(5381538-5381622)
chr2 (396-459)||(12966224-12966287)
chr2 (397-459)||(10708151-10708213)
chr2 (397-465)||(9401122-9401190)
chr2 (397-481)||(16712439-16712523)
chr2 (398-465)||(5484929-5484996)
chr2 (397-472)||(20237635-20237710)
chr2 (398-472)||(8885661-8885735)
chr2 (399-465)||(11131172-11131238)
chr2 (397-479)||(14848177-14848259)
chr2 (397-459)||(16330833-16330895)
chr2 (397-459)||(16712841-16712903)
chr2 (396-465)||(12602585-12602654)
chr2 (397-465)||(4602805-4602873)
chr2 (397-481)||(18064401-18064485)
chr2 (401-465)||(19299819-19299883)
chr2 (397-465)||(32194817-32194885)
chr2 (397-465)||(38806845-38806913)
chr2 (397-481)||(39109475-39109559)
chr2 (425-480)||(8029982-8030037)
chr2 (397-480)||(20685631-20685714)
chr2 (398-465)||(25334597-25334664)
chr2 (397-480)||(28189449-28189532)
chr2 (397-459)||(2970811-2970873)
chr2 (164-238)||(27449319-27449392)
chr2 (397-459)||(39107755-39107817)
chr2 (398-512)||(40469038-40469152)
chr2 (396-481)||(35668895-35668979)
chr2 (396-484)||(3202666-3202754)
chr2 (397-465)||(4844050-4844118)
chr2 (397-481)||(4980219-4980303)
chr2 (397-465)||(13479420-13479488)
chr2 (397-465)||(18469595-18469663)
chr2 (397-465)||(18470058-18470126)
chr2 (397-465)||(26424812-26424880)
chr2 (397-465)||(34618510-34618578)
chr2 (397-481)||(40537001-40537085)
chr2 (398-457)||(32194445-32194504)
chr2 (398-465)||(40468049-40468116)
chr2 (399-465)||(2822669-2822735)
chr2 (397-459)||(8444954-8445016)
chr2 (397-471)||(8893043-8893117)
chr2 (399-465)||(15136355-15136421)
chr2 (397-459)||(25881994-25882056)
chr2 (397-459)||(31557093-31557155)
chr2 (397-459)||(33200519-33200581)
chr2 (397-459)||(38807179-38807241)
chr2 (397-458)||(2970337-2970398)
chr2 (398-459)||(14287835-14287895)
chr2 (398-459)||(17978093-17978154)
chr2 (398-459)||(38536612-38536673)
[»] chr4 (61 HSPs)
chr4 (397-506)||(53594986-53595095)
chr4 (397-512)||(2735543-2735657)
chr4 (397-481)||(34543025-34543109)
chr4 (397-515)||(45046846-45046964)
chr4 (397-465)||(9091426-9091494)
chr4 (397-481)||(22679635-22679719)
chr4 (397-465)||(43291949-43292017)
chr4 (397-465)||(44304350-44304418)
chr4 (397-472)||(31487980-31488055)
chr4 (398-480)||(43629182-43629264)
chr4 (394-452)||(53595167-53595225)
chr4 (396-465)||(17259460-17259529)
chr4 (397-465)||(1098055-1098123)
chr4 (401-484)||(14525458-14525542)
chr4 (397-481)||(14525909-14525993)
chr4 (397-465)||(17475399-17475467)
chr4 (397-465)||(17475871-17475939)
chr4 (397-465)||(20614604-20614672)
chr4 (397-465)||(25618438-25618506)
chr4 (397-481)||(40256100-40256184)
chr4 (397-465)||(41610129-41610197)
chr4 (397-465)||(42369497-42369565)
chr4 (396-480)||(53596122-53596206)
chr4 (397-465)||(56271204-56271272)
chr4 (398-465)||(14947188-14947255)
chr4 (397-456)||(22813360-22813419)
chr4 (398-465)||(34237484-34237551)
chr4 (425-512)||(40680496-40680582)
chr4 (397-480)||(44182564-44182647)
chr4 (398-465)||(48453636-48453703)
chr4 (400-459)||(50282924-50282983)
chr4 (398-480)||(2734800-2734882)
chr4 (397-459)||(25619086-25619148)
chr4 (397-459)||(27739375-27739437)
chr4 (397-459)||(48453999-48454061)
chr4 (411-480)||(26281223-26281292)
chr4 (398-459)||(46058698-46058759)
chr4 (396-481)||(48091947-48092032)
chr4 (397-465)||(1098384-1098452)
chr4 (397-465)||(17258868-17258936)
chr4 (397-481)||(22680074-22680158)
chr4 (397-465)||(24045367-24045435)
chr4 (419-459)||(24297151-24297191)
chr4 (397-465)||(26673111-26673179)
chr4 (397-465)||(28504579-28504647)
chr4 (397-465)||(31262212-31262280)
chr4 (397-465)||(39321057-39321125)
chr4 (397-465)||(40681489-40681557)
chr4 (397-465)||(41845860-41845928)
chr4 (397-465)||(44303517-44303585)
chr4 (398-465)||(24045835-24045902)
chr4 (398-465)||(28505061-28505128)
chr4 (397-448)||(49906011-49906062)
chr4 (397-459)||(11815862-11815924)
chr4 (397-447)||(14251198-14251248)
chr4 (397-459)||(14947681-14947743)
chr4 (397-459)||(41845503-41845565)
chr4 (397-459)||(46307558-46307620)
chr4 (398-459)||(3503963-3504024)
chr4 (396-465)||(46308025-46308094)
chr4 (398-475)||(51624476-51624553)
[»] chr7 (55 HSPs)
chr7 (476-677)||(22057191-22057393)
chr7 (398-506)||(8685841-8685948)
chr7 (397-506)||(17236066-17236175)
chr7 (397-465)||(23140240-23140308)
chr7 (397-481)||(32072300-32072384)
chr7 (397-481)||(36720965-36721049)
chr7 (397-472)||(3217735-3217810)
chr7 (397-480)||(16955933-16956015)
chr7 (397-480)||(17278401-17278484)
chr7 (397-480)||(30765670-30765753)
chr7 (425-515)||(30474306-30474396)
chr7 (394-452)||(42754535-42754593)
chr7 (399-465)||(43705379-43705445)
chr7 (411-472)||(14682975-14683036)
chr7 (397-478)||(28460960-28461041)
chr7 (397-465)||(712531-712599)
chr7 (397-465)||(7776945-7777013)
chr7 (397-465)||(14681899-14681967)
chr7 (397-465)||(27284244-27284312)
chr7 (397-465)||(27284597-27284665)
chr7 (397-465)||(31852070-31852138)
chr7 (397-465)||(37374445-37374513)
chr7 (397-465)||(39143499-39143567)
chr7 (397-465)||(40852148-40852216)
chr7 (397-465)||(45456736-45456804)
chr7 (397-465)||(47987329-47987397)
chr7 (398-465)||(18458763-18458830)
chr7 (398-481)||(32072665-32072748)
chr7 (417-484)||(36720501-36720568)
chr7 (397-472)||(36951058-36951133)
chr7 (397-472)||(40851772-40851847)
chr7 (398-465)||(44333002-44333069)
chr7 (396-459)||(44495704-44495767)
chr7 (397-459)||(20493747-20493809)
chr7 (397-459)||(21433042-21433104)
chr7 (397-459)||(24733631-24733693)
chr7 (397-459)||(34621779-34621841)
chr7 (397-515)||(42753916-42754033)
chr7 (398-459)||(25443003-25443064)
chr7 (396-465)||(29414480-29414549)
chr7 (396-465)||(45995268-45995337)
chr7 (397-465)||(5905692-5905760)
chr7 (397-481)||(27383538-27383622)
chr7 (417-465)||(30766672-30766720)
chr7 (397-465)||(39143148-39143216)
chr7 (397-465)||(45457092-45457160)
chr7 (398-481)||(29933682-29933764)
chr7 (397-480)||(30475143-30475226)
chr7 (397-452)||(38444851-38444906)
chr7 (397-455)||(13965042-13965100)
chr7 (397-459)||(37373968-37374030)
chr7 (397-459)||(42287806-42287868)
chr7 (397-459)||(48095356-48095418)
chr7 (583-660)||(16887586-16887663)
chr7 (398-459)||(28460566-28460627)
[»] scaffold0533 (2 HSPs)
scaffold0533 (397-479)||(3840-3922)
scaffold0533 (425-479)||(4307-4361)
[»] scaffold0009 (3 HSPs)
scaffold0009 (397-465)||(242149-242217)
scaffold0009 (398-481)||(218135-218218)
scaffold0009 (406-478)||(217595-217667)
[»] scaffold0027 (1 HSPs)
scaffold0027 (397-459)||(40094-40156)
[»] scaffold0002 (2 HSPs)
scaffold0002 (397-465)||(283162-283230)
scaffold0002 (405-464)||(428980-429039)
[»] scaffold0259 (1 HSPs)
scaffold0259 (417-480)||(12064-12127)
[»] scaffold0150 (1 HSPs)
scaffold0150 (417-480)||(38904-38967)
[»] scaffold0043 (1 HSPs)
scaffold0043 (397-459)||(59741-59803)
[»] scaffold0005 (1 HSPs)
scaffold0005 (397-459)||(1477-1539)
[»] scaffold0360 (1 HSPs)
scaffold0360 (396-465)||(12074-12143)
[»] scaffold0054 (1 HSPs)
scaffold0054 (397-481)||(57530-57614)
[»] scaffold0006 (1 HSPs)
scaffold0006 (397-465)||(83374-83442)
[»] scaffold0220 (1 HSPs)
scaffold0220 (397-448)||(25965-26016)
[»] scaffold0192 (1 HSPs)
scaffold0192 (397-459)||(14697-14759)
[»] scaffold0014 (1 HSPs)
scaffold0014 (397-459)||(230874-230936)
[»] scaffold0126 (1 HSPs)
scaffold0126 (540-629)||(18447-18536)
[»] scaffold0042 (1 HSPs)
scaffold0042 (398-459)||(90163-90224)


Alignment Details
Target: chr3 (Bit Score: 296; Significance: 1e-166; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 397 - 747
Target Start/End: Complemental strand, 52706698 - 52706347
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  52706698 cttaaatgctcttgtggtctcttaagtttttatttggtatcgcttttgtcccttaactaaaaataagaccatttgaatactttaatttaactttcgttac 52706599  T
Q  497 a-ttttttggttccttctgtcaatggattaaccccatatgtcttaggtgcatcaatattatgagtggtccaccataaccttcgttaatttttaaatctta 595  Q
    | ||||||| | ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52706598 acttttttgatcccttccgtcaatggattaaccccagatgtcttaggtgcatcaatattatgagtggtccaccataaccttcgttaatttttaaatctta 52706499  T
Q  596 actatttgttctatttgtcaaaaaataaactatttgatctttgaggtttattgtaagtaacaatgcactatgaccacctaatcatttttccctatcttca 695  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  52706498 actgtttgttctatttgtcaaaaaataaactatttgatctttgaggtttattgtaagtaacaatgcactatgaccacctaatgatttttcccaatcttca 52706399  T
Q  696 tcttcttcaaacctcttctccatcattttgaacatcaccttcattaaccttc 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52706398 tcttcttcaaacctcttctccatcattttgaacatcaccttcattaatcttc 52706347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 91 - 289
Target Start/End: Complemental strand, 52707017 - 52706806
Alignment:
Q  91 ggtgatgattcgctcgggaactctgaatagtaaaaaactttatgaatgttattataacttgttcaaagcaaagaaaatacacatcaatcttattatatac 190  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52707017 ggtgatgattcgctcgggaactctgaatggtaaaaaactttatgaatgttattataatttgttcaaagcaaagaaaatacacatcaatcttattatatac 52706918  T
Q  191 tccaaataatgcata--------------tatagtcattttagatcaaccatacatacatacccacggagtggccctaagggcggacgggaggggcgata 276  Q
    |||||||||||||||              ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  52706917 tccaaataatgcatatatatatatatatatatagtcattttagatcaaccatacatacatactca-ggagtggccctgagggcggacgggaggggcgata 52706819  T
Q  277 gtctaggacacca 289  Q
    |||||||||||||    
T  52706818 gtctaggacacca 52706806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 53227145 - 53227236
Alignment:
Q  417 cttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttacattttttggttc 508  Q
    ||||||| |||||||| |||| ||||  || |||||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||    
T  53227145 cttaagtatttatttgatatcgctttgatctcttaactaaaaaaaagattgtttgagtactttaatttaattttcgttacattttttggttc 53227236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 48946742 - 48946667
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||||| ||||| ||||||    
T  48946742 cttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaactaaaaaaaagattatttga 48946667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 40503241 - 40503309
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||    
T  40503241 cttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagat 40503309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 52254305 - 52254388
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||||| |||||  |||||| |||||||||||||  ||| |||||||||||||||| |||||  ||||| |||||||    
T  52254305 cttaaatgctcttttggtcctttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtacttta 52254388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 48085295 - 48085233
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||||| |||| |||||||| |||| ||||||||||||||||    
T  48085295 cttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaa 48085233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 51676192 - 51676130
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||||||||||||||||||||    
T  51676192 cttaaatgctcttttggtcccttaattatttaattggtatcgctttcgtcccttaactaaaaa 51676130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 52857341 - 52857279
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| ||||||||| ||||||    
T  52857341 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaaataaaaa 52857279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 53228270 - 53228208
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||| ||||| ||||| ||||||| ||||||||||||| |||| ||||||||||||||||    
T  53228270 cttaaatactcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaa 53228208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 411 - 480
Target Start/End: Complemental strand, 32305312 - 32305243
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||| ||||| | |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  32305312 tggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 32305243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 36174511 - 36174572
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| ||||| ||||| | |||| ||||||||||||| ||||||||||||||||    
T  36174511 ttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaactaaaaa 36174572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 12739966 - 12740034
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  12739966 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 12740034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 24243053 - 24242985
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  24243053 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 24242985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 28919091 - 28919175
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| |||||  |||||| |||| |||||||| |||| ||||||||| |||||| |||||  ||||| ||||||||    
T  28919091 cttaaatgctcttttggtcgattaagtatttaattggtatcgctttggtcccttaattaaaaaaaagattgtttgagtactttaa 28919175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 44712121 - 44712053
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  44712121 cttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaactaaaaaaaagat 44712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 45940217 - 45940285
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  45940217 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 45940285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 48082873 - 48082956
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||| |||| ||||| ||||||| |||| |||||||||||||  ||||||||||||||| |||||  ||||| ||||||||    
T  48082873 cttaaatgttcttttggtcccttaagtatttaattggtatcactttgatcccttaactaaaaa-aagattgtttgagtactttaa 48082956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 425 - 480
Target Start/End: Complemental strand, 42541228 - 42541173
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  42541228 tttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 42541173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 12739880 - 12739942
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  12739880 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 12739942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 30359366 - 30359304
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaa 458  Q
    |||||||||||||| ||||| ||||||| |||| ||||||||| ||| |||| ||||||||||    
T  30359366 acttaaatgctcttttggtcccttaagtatttaattggtatcattttagtcctttaactaaaa 30359304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 38732001 - 38731933
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||| || ||||||||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  38732001 acttaaatgctttt-tggtctcttaactctttaattggtatcgctttggtcccttaactaaaaaaaagat 38731933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 50530618 - 50530703
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||| |||||| || | ||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  50530618 acttgaatgctattttagtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 50530703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 677
Target Start/End: Complemental strand, 6032372 - 6032256
Alignment:
Q  561 ggtccaccataaccttcgttaatttttaaatcttaactatttgttctatttgtcaaaaaataaactatttgatctttgaggtttattgtaagtaacaatg 660  Q
    |||||| ||||| || | || |||||| |||||||| |||||| | ||||||||||||||||||| |||  ||||| ||||| |||| || |||| |  |    
T  6032372 ggtccagcataaactacattgattttttaatcttaattatttgatatatttgtcaaaaaataaaccattgaatcttggaggtctattatatgtaatagcg 6032273  T
Q  661 cactatgaccacctaat 677  Q
    |||||| ||||| ||||    
T  6032272 cactatcaccacataat 6032256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 6099037 - 6098969
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| |||||  |||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  6099037 cttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 6098969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 9242088 - 9242156
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| || | | |||||| |||| ||||||||| ||| |||||||||||||||| |||||    
T  9242088 cttaaatgctcttttgattttttaagtatttaattggtatcattttggtcccttaactaaaaaaaagat 9242156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 13355783 - 13355715
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| |||||  |||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  13355783 cttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaactaaaaagaagat 13355715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 32304234 - 32304302
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||||||| | ||| |||||||| |||||||||||| |||| ||||||||| |||||| |||||    
T  32304234 cttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaagat 32304302  T

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Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 40503788 - 40503720
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  40503788 cttaattgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 40503720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 41263599 - 41263531
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||| |||||||||||| |||||    
T  41263599 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaactaaaaaaaagat 41263531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 44475709 - 44475641
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| |||||  |||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  44475709 cttaaatgctcttttggtccattaattatttaattggtatcgctttggtcccttaactaaaaaaaagat 44475641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 45940736 - 45940668
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  45940736 cttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 45940668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 50531164 - 50531096
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||| ||||||||||| |||||    
T  50531164 cttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcctttaactaaaaaaaagat 50531096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 465
Target Start/End: Original strand, 51675635 - 51675687
Alignment:
Q  413 gtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||| | |||| |||||||| ||||||||||||||||||||| |||||    
T  51675635 gtctcttaactatttaattggtatcgctttcgtcccttaactaaaaaaaagat 51675687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 52255585 - 52255525
Alignment:
Q  399 taaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||| |||| ||||| ||||||| ||||||||||||| |||| ||||||||||| ||||    
T  52255585 taaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaacttaaaa 52255525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 53246098 - 53246166
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | || | |||||||| |||| |||||||||||||||| |||||    
T  53246098 cttaaatgctcttttggtcccttaactattgaattggtatcgctttggtcccttaactaaaaaaaagat 53246166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 54831857 - 54831925
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||| |||  |||| ||||| | ||||||||||||| |||| |||||||||||||||| |||||    
T  54831857 cttaaatgcgctttcggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagat 54831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 452
Target Start/End: Original strand, 4953126 - 4953181
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    ||||||||||||| ||||| ||||||  ||||||||||||| |||| |||||||||    
T  4953126 cttaaatgctcttttggtcccttaaggatttatttggtatcgctttggtcccttaa 4953181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 442
Target Start/End: Original strand, 6276058 - 6276105
Alignment:
Q  395 aacttaaatgctcttgtggtctcttaagtttttatttggtatcacttt 442  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||| ||||    
T  6276058 aacttaaatgctcttttggtcccttaagtatttatttggtatcgcttt 6276105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 13302012 - 13301961
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtccc 448  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| |||||    
T  13302012 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 13301961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 13312668 - 13312617
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtccc 448  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| |||||    
T  13312668 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 13312617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 480
Target Start/End: Original strand, 34817361 - 34817416
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||||||| ||| |||||||||||||||| |||||  ||||| |||||||    
T  34817361 tttatttggtatcattttggtcccttaactaaaaaaaagattgtttgagtacttta 34817416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 36877441 - 36877374
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| |||| |||||| | |||| ||||||| | ||| |||||||||||||||| |||||    
T  36877441 ttaaatgctcttttggtatcttaactgtttaattggtattattttggtcccttaactaaaaaaaagat 36877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 43464814 - 43464865
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtccc 448  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| |||||    
T  43464814 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 43464865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 53227361 - 53227306
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    ||||||||||||| | ||| ||||||| ||||||| |||||||||| |||||||||    
T  53227361 cttaaatgctcttttcgtcgcttaagtatttatttagtatcactttggtcccttaa 53227306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 875969 - 876031
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||| |||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  875969 cttaaatgatcttttggtcccttaactatttaattggtatcgctttagtcccttaactaaaaa 876031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 966982 - 967044
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||| |||||||||||    
T  966982 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcctttaactaaaaa 967044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 29191858 - 29191796
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||  |||| ||||||||||||||||    
T  29191858 cttaaatgctcttttggtcccttaactatttaattggtattgctttggtcccttaactaaaaa 29191796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 472
Target Start/End: Complemental strand, 27990322 - 27990254
Alignment:
Q  403 tgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| ||||| ||||||    
T  27990322 tgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa-aagattatttga 27990254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 624
Target Start/End: Complemental strand, 52719889 - 52719780
Alignment:
Q  515 tcaatggattaaccccatatgtcttaggtgcatcaatattatgagtggtccaccataaccttcgttaatttttaaatcttaactatttgttctatttgtc 614  Q
    |||| |||||||||||| || ||||| ||| | ||| |||||  |||||||||||||| | || |||  |||| ||||||||| ||||| | ||||| ||    
T  52719889 tcaaaggattaaccccaaatatcttatgtggaccaacattatatgtggtccaccataaacctcattagctttttaatcttaaccatttgatatatttatc 52719790  T
Q  615 aaaaaataaa 624  Q
    |||| |||||    
T  52719789 aaaatataaa 52719780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 1e-33; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 506
Target Start/End: Complemental strand, 28866476 - 28866367
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||| ||||||||||| | ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||||||||||||||||||    
T  28866476 cttaaatgctcttttggtctcttaaatatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaatttaattttcgttac 28866377  T
Q  497 attttttggt 506  Q
    ||||||||||    
T  28866376 attttttggt 28866367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 397 - 512
Target Start/End: Original strand, 12586660 - 12586776
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataa-gatcatttgaatactttaatttaattttcgtta 495  Q
    ||||||||||||| || || ||||||| |||||||| |||||| || |||||||||||||||| || |||  ||||| ||||||||||||||||||||||    
T  12586660 cttaaatgctcttttgatcccttaagtatttatttgttatcaccttggtcccttaactaaaaaaaaagattgtttgagtactttaatttaattttcgtta 12586759  T
Q  496 cattttttggttccttc 512  Q
    ||||||||||| |||||    
T  12586760 cattttttggtcccttc 12586776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 27128846 - 27128929
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||| ||| ||||| ||||| | |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  27128846 cttaaatgcgcttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 27128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 12261546 - 12261463
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||  || ||||| ||||| | |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  12261546 cttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 12261463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 902809 - 902747
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||| | |||||| |||||| ||||||||||||| |||| ||||||||||||||||    
T  902809 cttaaatgctcatttggtcttttaagtatttatttggtatcgctttggtcccttaactaaaaa 902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 476
Target Start/End: Original strand, 29435064 - 29435142
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatac 476  Q
    |||| ||||||| | ||| ||||||||||||||| |||||||||| ||||||||| |||||| |||| | |||||||||    
T  29435064 ttaattgctctttttgtcccttaagtttttatttagtatcactttagtcccttaaataaaaaaaagaccgtttgaatac 29435142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 3366500 - 3366568
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||| || ||||||||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  3366500 cttaaatgctattttggtctcttaattatttaattggtatcgctttggtcccttaactaaaaaaaagat 3366568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 8850220 - 8850336
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaact-aaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    |||||||| ||| ||||| ||||| | ||||||| |||||||||| ||||||||||| ||||| |||||  ||||| ||||||| ||| || | ||||||    
T  8850220 ttaaatgcgcttttggtcccttaactatttatttagtatcactttggtcccttaactaaaaaaaaagattgtttgagtactttatttttatctccgttac 8850319  T
Q  497 attttttggttccttct 513  Q
     | ||||||| ||||||    
T  8850320 ctattttggtcccttct 8850336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 17383737 - 17383805
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  17383737 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 17383805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 21271488 - 21271556
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  21271488 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 21271556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 21272175 - 21272107
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  21272175 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 21272107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 22498823 - 22498755
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  22498823 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 22498755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 29175579 - 29175511
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  29175579 cttaaatgctcttttggtcccttaactatttaattggtatctctttggtcccttaactaaaaaaaagat 29175511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 31739971 - 31739903
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  31739971 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 31739903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 3367054 - 3366979
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||||||||| || || ||||| | |||| |||||||| |||| |||||||||||||||| ||||| ||||||    
T  3367054 cttaaatgctcttttgctcccttaattatttaattggtatcgctttggtcccttaactaaaaaaaagattatttga 3366979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 10914563 - 10914630
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||| |||| ||||||||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  10914563 ttaaatgttcttttggtctcttaaatatttaattggtatcgctttggtcccttaactaaaaaaaagat 10914630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 12586908 - 12586853
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    ||||||||||||| | ||| ||||||| |||||||||||||||||| |||||||||    
T  12586908 cttaaatgctcttttcgtcccttaagtatttatttggtatcactttggtcccttaa 12586853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 26392901 - 26392839
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  26392901 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 26392839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 14527572 - 14527511
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  14527572 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 14527511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 12260448 - 12260516
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||||||| | ||| |||||||| |||||||||||| |||| ||||||||| |||||| |||||    
T  12260448 cttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaagat 12260516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 13703383 - 13703451
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| |||||    
T  13703383 cttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaactaaaaaaaagat 13703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 13839477 - 13839545
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||  |||| |||||||||||||||| |||||    
T  13839477 cttaaatgctcttttggtcccttaactatttaattggtattgctttggtcccttaactaaaaaaaagat 13839545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 13204227 - 13204289
Alignment:
Q  417 cttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||| ||||||| ||||||||||  ||||||||||||||| ||||  ||||||||||||||    
T  13204227 cttaagtatttatttagtatcactttgatcccttaactaaaaa-aagactatttgaatacttta 13204289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 901420 - 901482
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||  || |||||  |||||| ||||||||||||| |||| ||||||||||||||||    
T  901420 cttaaatgcgtttttggtcctttaagtatttatttggtatcgctttggtcccttaactaaaaa 901482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 9424964 - 9424902
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||  ||||| | |||| |||||||| |||| ||||||||||||||||    
T  9424964 cttaaatgctcttttggtgccttaactatttaattggtatcgctttggtcccttaactaaaaa 9424902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 13839924 - 13839862
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||| ||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  13839924 cttaaatgcacttttggtcccttaaatatttaattggtatcgctttggtcccttaactaaaaa 13839862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 397 - 513
Target Start/End: Original strand, 30644916 - 30645032
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||| ||||| ||||| | ||||||||||||| || | |||||||||||||||| |||||  ||||| |||||||||||||||||||||||    
T  30644916 cttaaatgctcttttggtcccttaaatatttatttggtatcgctatggtcccttaactaaaaaaaagattgtttgagtactttaatttaattttcgttac 30645015  T
Q  497 attttttggttccttct 513  Q
    |||||||||| ||||||    
T  30645016 attttttggtcccttct 30645032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 28904632 - 28904747
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataa-gatcatttgaatactttaatttaattttcgtta 495  Q
    ||||||||||||| ||||| ||||||| |||||||||||||  |||  ||||||||||||||| || ||| |||||| ||||||||||||||||||||||    
T  28904632 cttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaactaaaaaaaaagattatttgagtactttaatttaattttcgtta 28904731  T
Q  496 cattttttggttcctt 511  Q
    ||||||||||| ||||    
T  28904732 cattttttggtccctt 28904747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 28941027 - 28941142
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataa-gatcatttgaatactttaatttaattttcgtta 495  Q
    ||||||||||||| ||||| ||||||| |||||||||||||  |||  ||||||||||||||| || ||| |||||| ||||||||||||||||||||||    
T  28941027 cttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaactaaaaaaaaagattatttgagtactttaatttaattttcgtta 28941126  T
Q  496 cattttttggttcctt 511  Q
    ||||||||||| ||||    
T  28941127 cattttttggtccctt 28941142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 397 - 512
Target Start/End: Original strand, 39547779 - 39547894
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    |||||||||| || ||||| ||||| | ||||||||||||| |||| |||| ||||||||||| |||||  ||| |  ||||||||||||||||||||||    
T  39547779 cttaaatgcttttttggtcccttaaatatttatttggtatcgctttggtcctttaactaaaaaaaagattgttttagcactttaatttaattttcgttac 39547878  T
Q  497 attttttggttccttc 512  Q
    |||||||||| |||||    
T  39547879 attttttggtcccttc 39547894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 397 - 506
Target Start/End: Complemental strand, 14348271 - 14348161
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagt-ttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgtta 495  Q
    ||||||| ||||| ||||| ||||| | ||||||||||||||  ||| |||||||||||||||| |||||  ||||  ||||||||||||||||||||||    
T  14348271 cttaaatactcttttggtcccttaaatattttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgggtactttaatttaattttcgtta 14348172  T
Q  496 cattttttggt 506  Q
    |||||||||||    
T  14348171 cattttttggt 14348161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 19798776 - 19798693
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  19798776 cttaaatgctcttttggtcccttaagtatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 19798693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 30645783 - 30645700
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||    
T  30645783 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 30645700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 14347403 - 14347465
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| ||||||||||||||||    
T  14347403 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaa 14347465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 397 - 515
Target Start/End: Original strand, 19797666 - 19797784
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||| | ||||| ||||||| |||||||||||||  ||| |||||||||||||||| |||||  ||||| || |||| ||| || | ||||||    
T  19797666 cttaaatgctcgtttggtcccttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtattttatttttatctccgttac 19797765  T
Q  497 attttttggttccttctgt 515  Q
     | ||||||| ||||||||    
T  19797766 ctgttttggtcccttctgt 19797784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 14233150 - 14233066
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||||| || ||||||||||||| |||| |||||||| |||| ||| |||||||||||| |||||  ||||| ||||||||    
T  14233150 cttaaatgctattttggtctcttaagtatttaattggtatcgctttggtctcttaactaaaaaaaagattgtttgagtactttaa 14233066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 484
Target Start/End: Complemental strand, 20243908 - 20243821
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaattt 484  Q
    ||||||||||||| ||||| ||||||| |||| ||||| || |||  |||||||||||||||| |||||  ||||| |||||||||||    
T  20243908 cttaaatgctcttttggtcccttaagtatttaattggtgtcgcttgggtcccttaactaaaaaaaagattgtttgagtactttaattt 20243821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 28905513 - 28905430
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||| |||| ||||| ||||||| ||||||||||||| |||| |||||||||||||||| || ||  ||||| |||||||    
T  28905513 cttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtacttta 28905430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 28941908 - 28941825
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||| |||| ||||| ||||||| ||||||||||||| |||| |||||||||||||||| || ||  ||||| |||||||    
T  28941908 cttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtacttta 28941825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 39548656 - 39548573
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||||| ||||| ||||||| ||||||| |||||  ||| |||||||||||||||| |||||  ||||| |||||||    
T  39548656 cttaaatgctcttttggtcccttaagtatttattttgtatcgttttggtcccttaactaaaaaaaagattgtttgagtacttta 39548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 411 - 480
Target Start/End: Complemental strand, 37192514 - 37192445
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||| ||||| | ||||||||||||| |||| |||||||||||||||| ||||| |||||| |||||||    
T  37192514 tggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtacttta 37192445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 435556 - 435624
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  435556 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 435624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 1031360 - 1031300
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaa 457  Q
    ||||||||||||| ||||||||||| | |||| |||||||| |||| ||||||||||||||    
T  1031360 cttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaactaaa 1031300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 1095497 - 1095581
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||| |||| | ||||||||||| |||| |||||||| |||| |||||||||||||||| || ||  ||||| ||||||||    
T  1095497 cttaaatgttcttttagtctcttaagtatttaattggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtactttaa 1095581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 5187177 - 5187093
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| | |||  ||||| ||||||||    
T  5187177 cttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaactaaaaaaatgattgtttgagtactttaa 5187093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 6793769 - 6793837
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||||||| | ||| |||||||| ||||||||||||||||| ||||||||| |||||| |||||    
T  6793769 cttaattgctctttttgtcccttaagttattatttggtatcactttggtcccttaagtaaaaaaaagat 6793837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 16670084 - 16670016
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  16670084 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 16670016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 24042735 - 24042667
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||  || ||||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||    
T  24042735 cttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagat 24042667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 24100756 - 24100688
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  24100756 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 24100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 25586300 - 25586384
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||||| || ||||| ||||||| |||| |||||||  |||| |||||||||||||||| |||||  ||||| ||||||||    
T  25586300 cttaaatgcttttttggtcccttaagtatttaattggtattgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 25586384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 27850684 - 27850752
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  27850684 cttaaatgctcttttggtcccttaactatttaattggtatctctttggtcccttaactaaaaaaaagat 27850752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 27851099 - 27851031
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  27851099 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 27851031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 29962237 - 29962169
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  29962237 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 29962169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 30012561 - 30012629
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  30012561 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 30012629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 38312327 - 38312395
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  38312327 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 38312395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 6794835 - 6794752
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||  || ||||| ||||| | |||||||| ||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  6794835 cttaaatgcgtttttggtcccttaactatttatttgttatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 6794752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 27098543 - 27098610
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  27098543 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 27098610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 37191595 - 37191678
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||  ||| ||||| ||||| | ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||    
T  37191595 cttaaatgtgcttttggtcccttaactgtttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 37191678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 13668565 - 13668503
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| |||||  |||||| |||| |||||||| |||| ||||||||||||||||    
T  13668565 cttaaatgctcttttggtccattaagtatttaattggtatcgctttggtcccttaactaaaaa 13668503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 14348941 - 14349002
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| |||| |||||| | |||| |||||||| |||| ||||||||||||||||    
T  14348941 ttaaatgctcttttggtttcttaactatttaattggtatcgctttggtcccttaactaaaaa 14349002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 490
Target Start/End: Complemental strand, 30112766 - 30112673
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaatttt 490  Q
    ||||| ||||||| | ||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||| | |||||| || |||||    
T  30112766 cttaattgctcttttagtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagttctttaagtttatttt 30112673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 478
Target Start/End: Complemental strand, 39024013 - 39023932
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactt 478  Q
    ||||||||||||| ||||| ||||||| ||||  |||||||  ||| |||||||||||||||| |||||  ||||| |||||    
T  39024013 cttaaatgctcttttggtcccttaagtatttagatggtatcgttttggtcccttaactaaaaaaaagattgtttgagtactt 39023932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 703
Target Start/End: Original strand, 43197864 - 43197953
Alignment:
Q  615 aaaaaataaactatttgatctttgaggtttattgtaagtaacaatgcactatgaccacctaatcat-ttttccctatcttcatcttcttc 703  Q
    ||||||||||| ||||||||| ||||||  |||||||| |||||| || ||| |||| |||||  | ||||||||||||| |||||||||    
T  43197864 aaaaaataaaccatttgatctctgaggtcaattgtaaggaacaatacaatataaccatctaatgttattttccctatcttgatcttcttc 43197953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 16669508 - 16669576
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||  ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  16669508 cttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 16669576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 17339797 - 17339865
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  17339797 cttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 17339865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 26888587 - 26888655
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| || ||||| |||| |||||||||||||||| |||||    
T  26888587 cttaaatgctcttttggtcccttaactatttaatttgtatcgctttggtcccttaactaaaaaaaagat 26888655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 26888991 - 26888923
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||| |||| |||| |||||||||||||||| |||||    
T  26888991 cttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaactaaaaaaaagat 26888923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 29961812 - 29961880
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||| ||||||||||| |||||    
T  29961812 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtccattaactaaaaaaaagat 29961880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 35774238 - 35774170
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||| || ||||| ||||| | |||| ||||||||||||| ||| |||||||||||| |||||    
T  35774238 cttaaatgcttttttggtcccttaactatttaattggtatcactttggtctcttaactaaaaaaaagat 35774170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 30645163 - 30645108
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    ||||||||||||| | ||| ||||||| |||||||||||||| ||| |||||||||    
T  30645163 cttaaatgctcttttcgtcccttaagtatttatttggtatcattttggtcccttaa 30645108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 38385857 - 38385774
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||| ||| ||||| ||||| | |||||||| |||| |||| |||||||||||||||  |||||  ||||| |||||||    
T  38385857 cttaaatgcgcttttggtcccttaactatttatttgatatcgctttggtcccttaactaaaataaagattgtttgagtacttta 38385774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 39548026 - 39547971
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    ||||||| ||||| | ||| ||||||| |||||||||||||||||| |||||||||    
T  39548026 cttaaattctcttttcgtcccttaagtatttatttggtatcactttggtcccttaa 39547971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 4077471 - 4077409
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| | ||| | |||| |||||||| |||| ||||||||||||||||    
T  4077471 cttaaatgctcttttggtcccctaaatatttaattggtatcgctttggtcccttaactaaaaa 4077409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 4959563 - 4959625
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  4959563 cttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 4959625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 6157553 - 6157491
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| ||||||||||||||||    
T  6157553 cttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaactaaaaa 6157491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 13824688 - 13824634
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||    
T  13824688 tggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagat 13824634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 17420631 - 17420693
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||| |||| |||| |||||||| |||| |||||||| |||| |||| |||||||||||    
T  17420631 cttaaatgttcttttggtttcttaagtatttaattggtatcgctttggtcctttaactaaaaa 17420693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 6e-30; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 397 - 512
Target Start/End: Original strand, 5804695 - 5804810
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||  ||| | ||||||||||||||||| |||||    
T  5804695 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttcagtactttaatttaatttttgttac 5804794  T
Q  497 attttttggttccttc 512  Q
    |||||||||| |||||    
T  5804795 attttttggtcccttc 5804810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 16659079 - 16659194
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataa-gatcatttgaatactttaatttaattttcgtta 495  Q
    ||||||||||||| ||||| ||||||| |||||||||||||  |||  ||||||||||||||| || ||| |||||| ||||||||||||||||||||||    
T  16659079 cttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaactaaaaaaaaagattatttgagtactttaatttaattttcgtta 16659178  T
Q  496 cattttttggttcctt 511  Q
    ||||||||||| ||||    
T  16659179 cattttttggtccctt 16659194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 584 - 696
Target Start/End: Complemental strand, 50403496 - 50403384
Alignment:
Q  584 ttttaaatcttaactatttgttctatttgtcaaaaaataaactatttgatctttgaggtttattgtaagtaacaatgcactatgaccacctaatcatttt 683  Q
    |||| |||||||||| |||| ||||||| | | |||||||||||| ||||||||||||| |||||||||||||||| |||||  |||| |||||  ||||    
T  50403496 tttttaatcttaactgtttgatctatttattataaaataaactatatgatctttgaggtctattgtaagtaacaatacactaaaaccatctaatgttttt 50403397  T
Q  684 tccctatcttcat 696  Q
    |||||||||||||    
T  50403396 tccctatcttcat 50403384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 405 - 512
Target Start/End: Original strand, 38657686 - 38657793
Alignment:
Q  405 ctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttacattttttg 504  Q
    ||||| |||| |||||||| |||||||||||||  ||| |||||||||||||||| |||||  ||||| || ||||||||||||||| ||| ||||||||    
T  38657686 ctcttttggtatcttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtattttaatttaattttcattatattttttg 38657785  T
Q  505 gttccttc 512  Q
    || |||||    
T  38657786 gtcccttc 38657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 24326584 - 24326667
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||||| ||||| ||||| | ||||||||||||| |||| |||||||||||||||| ||||| |||||| |||||||    
T  24326584 cttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtacttta 24326667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 28050071 - 28049987
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  28050071 cttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaacaagattgtttgagtactttaa 28049987  T

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Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 31697116 - 31697200
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||||||| ||||| ||||| | ||||||||||||| |||| |||||||||||||||| || || |||||| |||||||    
T  31697116 acttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcccttaactaaaaaaaaaattatttgagtacttta 31697200  T

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Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 24332370 - 24332287
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||||| |||||  |||| | ||||||||||||| |||| |||||||||||||||| ||||| |||||| |||||||    
T  24332370 cttaaatgctcttttggtcctttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtacttta 24332287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 5806033 - 5805972
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| ||||||||||||| |||||||||||||  ||| ||||||||||||||||    
T  5806033 ttaaatgctcttttggtctcttaagtatttatttggtatcgttttggtcccttaactaaaaa 5805972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 6137235 - 6137303
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||||| |||||    
T  6137235 cttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaactaaaaaaaagat 6137303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 33171894 - 33171834
Alignment:
Q  399 taaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||| ||||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  33171894 taaatgctcttttggtcacttaagtatttaattggtatcactttggtcccttaactaaaaa 33171834  T

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Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 414 - 485
Target Start/End: Complemental strand, 969203 - 969132
Alignment:
Q  414 tctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaattta 485  Q
    |||||||||| |||||||||||||||||| || ||||||||||||| |||||  ||||| ||||||| ||||    
T  969203 tctcttaagtatttatttggtatcactttggttccttaactaaaaaaaagattgtttgagtactttatttta 969132  T

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Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 16659960 - 16659877
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||| |||| ||||| ||||||| ||||||||||||| |||| |||||||||||||||| || ||  ||||| |||||||    
T  16659960 cttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtacttta 16659877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 49652400 - 49652483
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||| ||| ||||  ||||| | |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  49652400 cttaaatgcgcttttggtaccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 49652483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 7964115 - 7964177
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | ||||||||||||| |||| ||||||||||||||||    
T  7964115 cttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaa 7964177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 24231541 - 24231479
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||||||||| | |||| |||||||| |||| ||||||||||||||||    
T  24231541 cttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaactaaaaa 24231479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 515
Target Start/End: Complemental strand, 38658932 - 38658814
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||  ||||| ||||||| |||||||| |||  |||| |||||||||||||||| |||||  ||||| |||||||  || || | ||||||    
T  38658932 cttaaatgctctcttggtcccttaagtatttatttgatattgctttggtcccttaactaaaaaaaagattgtttgagtactttatatttatctccgttac 38658833  T
Q  497 attttttggttccttctgt 515  Q
     | ||||||| ||||||||    
T  38658832 ctgttttggtcccttctgt 38658814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 1039699 - 1039783
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| |||||| |||||| |||| ||| ||||  ||| |||||||||||||||| |||||   |||||||||||||    
T  1039699 cttaaatgctcttttggtcttttaagtatttaattgatatcgttttggtcccttaactaaaaaaaagattgattgaatactttaa 1039783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 1040195 - 1040127
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||| |||| ||||||||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  1040195 cttaaatgttcttttggtctcttaaatatttaattggtatcgctttggtcccttaactaaaaaaaagat 1040127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 1046605 - 1046689
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| |||||| |||||| |||| ||| ||||  ||| |||||||||||||||| |||||   |||||||||||||    
T  1046605 cttaaatgctcttttggtcttttaagtatttaattgatatcgttttggtcccttaactaaaaaaaagattgattgaatactttaa 1046689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 1047101 - 1047033
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||| |||| ||||||||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  1047101 cttaaatgttcttttggtctcttaaatatttaattggtatcgctttggtcccttaactaaaaaaaagat 1047033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 3798326 - 3798394
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  3798326 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 3798394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 3798766 - 3798698
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  3798766 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 3798698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 5598520 - 5598588
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  5598520 cttaaatgctcttttggtcgcttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 5598588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 6328386 - 6328318
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||||||| ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||    
T  6328386 cttaattgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagat 6328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 14244616 - 14244548
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  14244616 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 14244548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 24370117 - 24370185
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  24370117 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 24370185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 24381217 - 24381149
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  24381217 cttaaatgctcttttggtcccttaattatttaattggtatcgctttggtcccttaactaaaaaaaagat 24381149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 37483056 - 37483124
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  37483056 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 37483124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 38980110 - 38980042
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  38980110 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 38980042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 44114574 - 44114506
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  44114574 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 44114506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 45678714 - 45678782
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  45678714 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 45678782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 46448219 - 46448287
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  46448219 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 46448287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 48984361 - 48984277
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| |||||  | ||||||||||||    
T  48984361 cttaaatgctcttttggtcccttaaatatttaattggtatctatttggtcccttaactaaaaaaaagattgtctgaatactttaa 48984277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 50138497 - 50138565
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  50138497 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 50138565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 50138926 - 50138858
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  50138926 cttaaatgctcttttggtcccttaactatttaattggtatcgctttagtcccttaactaaaaaaaagat 50138858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 50227970 - 50227902
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  50227970 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 50227902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 42617249 - 42617174
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    |||||||| |||| ||||  ||||||| |||| |||||||| |||| |||||||||||||||| ||||| ||||||    
T  42617249 cttaaatgatcttttggttccttaagtatttaattggtatcgctttagtcccttaactaaaaaaaagattatttga 42617174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 1109327 - 1109241
Alignment:
Q  152 ttcaaagcaaagaaaatacacatcaatcttattatatactccaaataatgcatatatagtcattttagatcaaccatacatacatac 238  Q
    |||||| |||| ||||||||||  |||| | ||||||||||||||||||||||| ||| || ||||||| |||| |||  |||||||    
T  1109327 ttcaaaacaaataaaatacacaaaaatcattttatatactccaaataatgcatagataatcgttttagaacaacaataagtacatac 1109241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 7965566 - 7965504
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||||||||||||  ||| ||||||||||||||||    
T  7965566 cttaaatgctcttttggtcccttaactatttatttggtatcgttttggtcccttaactaaaaa 7965504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 31488027 - 31488089
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  31488027 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 31488089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 32322211 - 32322272
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| |||||| |||||| |||| |||||||| |||| ||||||||||||||||    
T  32322211 cttaaatgctcttttggtct-ttaagtatttagttggtatcgctttagtcccttaactaaaaa 32322272  T

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Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 33171344 - 33171406
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||| |||| || || ||||||| |||| ||||||||||||||||||||||| ||||||    
T  33171344 cttaaatgttcttatgatcgcttaagtatttaattggtatcactttcgtcccttaattaaaaa 33171406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 37483599 - 37483537
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  37483599 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 37483537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 51241740 - 51241794
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||    
T  51241740 tggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagat 51241794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 480
Target Start/End: Original strand, 29021598 - 29021667
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||| ||||| | ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||    
T  29021598 tggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 29021667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 33784678 - 33784609
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||| ||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  33784678 acttaaatactcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 33784609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 48498259 - 48498194
Alignment:
Q  394 aaacttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||||||| ||||  ||||||| |||| |||||||| ||||  |||||||||||||||    
T  48498259 aaacttaaatgctcttttggttccttaagtatttaattggtatcgctttgatcccttaactaaaaa 48498194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 6714204 - 6714272
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| |||||  |||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  6714204 cttaaatgctcttttggtccgttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 6714272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 6714759 - 6714691
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||| |||||| |||||    
T  6714759 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaagat 6714691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 7334984 - 7334916
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| |||||    
T  7334984 cttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaactaaaaaaaagat 7334916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 9478258 - 9478326
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| || | |||||||||||||||| |||||    
T  9478258 cttaaatgctcttttggtcccttaactatttaattggtatcgctatggtcccttaactaaaaaaaagat 9478326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 9478673 - 9478605
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| || || ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  9478673 cttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 9478605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 15073417 - 15073485
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| || || ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  15073417 cttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 15073485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 21507540 - 21507624
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| ||  | ||||||| |||| |||||||  |||| |||||||||||||||| |||||  ||||| ||||||||    
T  21507540 cttaaatgctcttttgaccccttaagtatttagttggtattgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 21507624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 465
Target Start/End: Complemental strand, 29022577 - 29022537
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  29022577 tttatttggtatcactttggtcccttaactaaaaaaaagat 29022537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 31488468 - 31488400
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| |||||    
T  31488468 cttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaactaaaaaaaagat 31488400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 37708194 - 37708262
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||  ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  37708194 cttaaatgctcttttggttccttaattatttaattggtatcgctttggtcccttaactaaaaaaaagat 37708262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 38979673 - 38979741
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||  |||||||| |||| |||||||||||||||| |||||    
T  38979673 cttaaatgctcttttggtcccttaactatttcattggtatcgctttggtcccttaactaaaaaaaagat 38979741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 39851176 - 39851244
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| |||||  |||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  39851176 cttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 39851244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 42616697 - 42616780
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| |||||  |||||| |||| ||||||||  ||| |||||||||||||||| || ||  ||||||||||||||    
T  42616697 cttaaatgctcttttggtcctttaagtatttaattggtatcgttttggtcccttaactaaaaa-aaaattgtttgaatactttaa 42616780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 45678374 - 45678442
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| || || ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  45678374 cttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 45678442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 46448797 - 46448729
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| | ||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  46448797 cttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 46448729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 50227517 - 50227585
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| | |||||||||||||| |||||    
T  50227517 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggccccttaactaaaaaaaagat 50227585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 7121877 - 7121814
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||||| ||||| ||||| | |||| ||||||||  ||| ||||||||||||||||    
T  7121877 acttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaactaaaaa 7121814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 24508212 - 24508295
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||||| | |||  |||||| |||||||||||||  |||  ||||||||||||||| ||||| |||| | |||||||    
T  24508212 cttaaatgctctttttgtcatttaagtatttatttggtatcgttttgatcccttaactaaaaaaaagattatttaagtacttta 24508295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 34023629 - 34023562
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| | ||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  34023629 ttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 34023562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 35814452 - 35814397
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    ||||||||||||| ||||| ||||||| |||| |||||||| |||| |||||||||    
T  35814452 cttaaatgctcttttggtcccttaagtatttacttggtatcgctttggtcccttaa 35814397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 38657914 - 38657859
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    ||||||||||||| | |||  |||||| |||||||||||||||||| |||||||||    
T  38657914 cttaaatgctcttttcgtcctttaagtatttatttggtatcactttggtcccttaa 38657859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 512
Target Start/End: Complemental strand, 47113170 - 47113055
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||| ||||||| | ||| |||||||| |||||||||||| ||||  |||||||| |||||| ||||| ||||   |||||||  || || | ||||||    
T  47113170 cttaattgctcttttcgtcccttaagttattatttggtatcgctttgatcccttaagtaaaaaaaagattattttggtactttatctttatctccgttac 47113071  T
Q  497 attttttggttccttc 512  Q
    || ||||||| |||||    
T  47113070 atgttttggtcccttc 47113055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 480
Target Start/End: Original strand, 52750192 - 52750247
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||    
T  52750192 tttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 52750247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 1524007 - 1524065
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaacta 455  Q
    |||||||||  || ||||| ||||| | |||||||||||||||||| ||||||||||||    
T  1524007 cttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaacta 1524065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 32194051 - 32193989
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||  ||||| | |||| |||||||| |||| ||||||||||||||||    
T  32194051 cttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaactaaaaa 32193989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 35368858 - 35368920
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||| ||||||    
T  35368858 cttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaattaaaaa 35368920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 399 - 481
Target Start/End: Original strand, 35968295 - 35968377
Alignment:
Q  399 taaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||| ||||| ||||||| |||| ||| |||  ||||  ||||||||||||||| |||||  ||||| ||||||||    
T  35968295 taaatgctcttttggtcccttaagtatttaattgatattgctttgatcccttaactaaaaaaaagattgtttgagtactttaa 35968377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 37708635 - 37708573
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| ||||  |||||||||||||||    
T  37708635 cttaaatgctcttttggtcccttaactatttaattggtatcgctttgatcccttaactaaaaa 37708573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 417 - 459
Target Start/End: Complemental strand, 49964184 - 49964142
Alignment:
Q  417 cttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||    
T  49964184 cttaagttattatttggtatcactttggtcccttaagtaaaaa 49964142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 459
Target Start/End: Complemental strand, 50124627 - 50124593
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||||||||| |||||||||||||||    
T  50124627 tttatttggtatcactttcatcccttaactaaaaa 50124593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 10719689 - 10719644
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcacttt 442  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| ||||    
T  10719689 cttaaatgctcttttggtcccttaagtatttatttggtatcgcttt 10719644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 49548125 - 49548186
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||| || ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  49548125 ttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 49548186  T

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Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 398 - 512
Target Start/End: Original strand, 16905258 - 16905372
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttaca 497  Q
    |||||||||||| ||||| ||||||| ||||||||||||| |||| ||||||| |||||||| |||||  ||||| |||||||||||||||||| |||||    
T  16905258 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttgactaaaaaaaagattgtttgagtactttaatttaattttcattaca 16905357  T
Q  498 ttttttggttccttc 512  Q
    ||||||||| |||||    
T  16905358 ttttttggtcccttc 16905372  T

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Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 512
Target Start/End: Complemental strand, 22595203 - 22595086
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagt--ttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgtt 494  Q
    ||||||||||||| ||||| ||||| |  ||||||||| |||| |||| |||||||||||||||| |||||  ||||| |||||||||||||||||||||    
T  22595203 cttaaatgctcttttggtcccttaaatatttttatttgatatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaatttaattttcgtt 22595104  T
Q  495 acattttttggttccttc 512  Q
    ||||||||| || |||||    
T  22595103 acatttttttgtcccttc 22595086  T

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Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 503
Target Start/End: Original strand, 9317026 - 9317131
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgtta 495  Q
    |||||||||||||| ||||| ||||||| |||||||| ||||||||| ||||||||||  |||| |||| | ||| | ||||||||||||||||| ||||    
T  9317026 acttaaatgctcttttggtcccttaagtatttatttgatatcactttggtcccttaac--aaaaaaagaccgttttagtactttaatttaatttttgtta 9317123  T
Q  496 catttttt 503  Q
    || |||||    
T  9317124 cacttttt 9317131  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 22594320 - 22594403
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||| |||| ||||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||    
T  22594320 cttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 22594403  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 22323997 - 22323935
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  22323997 cttaaatgctcttttggtcccttaagtatttaattggtatcactttggtcccttaactaaaaa 22323935  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 23017245 - 23017160
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||||||||| ||||| ||||||| |||| ||||||||  ||| |||||||||||||||| |||||  ||||| ||||||||    
T  23017245 acttaaatgctcttttggtcccttaagtatttagttggtatcggtttggtcccttaactaaaaaaaagattgtttgactactttaa 23017160  T

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Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 3443033 - 3443117
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||| | ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  3443033 cttaaatgctcatttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 3443117  T

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Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 9115603 - 9115687
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||||| || ||||| ||||||| |||| |||||||| |||| ||||| |||||||||| |||||  ||||||||||||||    
T  9115603 cttaaatgctattttggtcccttaagtatttagttggtatcgctttggtcccctaactaaaaaaaagattgtttgaatactttaa 9115687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 13462108 - 13462191
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||  || ||||| ||||| | |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  13462108 cttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 13462191  T

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Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 484
Target Start/End: Complemental strand, 43273888 - 43273806
Alignment:
Q  401 aatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaattt 484  Q
    ||||||||| ||||| ||||||| |||| |||||||| ||||  ||||||||||||||| |||||  |||||||||||||||||    
T  43273888 aatgctcttttggtcccttaagtatttaattggtatcgctttgatcccttaactaaaaa-aagattgtttgaatactttaattt 43273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 15271124 - 15271186
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaa 458  Q
    ||||||||| |||| ||||| ||||||| |||| ||||||||||||| |||||||||||||||    
T  15271124 acttaaatgttcttttggtcacttaagtatttaattggtatcactttggtcccttaactaaaa 15271186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 15271651 - 15271562
Alignment:
Q  394 aaacttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaattt 484  Q
    |||||||||||||||| ||||| ||||||| |||| |||||||||||||  ||| ||||||||||| || ||  ||||| |||||||||||    
T  15271651 aaacttaaatgctcttttggtc-cttaagtatttaattggtatcactttgatcctttaactaaaaaaaatattgtttgagtactttaattt 15271562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 25825358 - 25825296
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||||||||| | |||| |||||||| |||| ||||||||||||||||    
T  25825358 cttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaactaaaaa 25825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 30864166 - 30864227
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| ||||| ||||||| |||| |||||||| |||| ||||||||||||||||    
T  30864166 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaa 30864227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 40229695 - 40229626
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||||| ||||| ||||| | |||| || |||||||||| |||||||||||||||| |||||    
T  40229695 acttaaatgctcttttggtcccttaactatttaatttgtatcactttggtcccttaactaaaaaaaagat 40229626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 2221596 - 2221664
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  2221596 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 2221664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 9739841 - 9739773
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  9739841 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 9739773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 11713202 - 11713270
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  11713202 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 11713270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 473
Target Start/End: Complemental strand, 11760971 - 11760895
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaa 473  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| ||||| |||||||    
T  11760971 cttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaactaaaaaaaagattatttgaa 11760895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 22013464 - 22013532
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  22013464 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 22013532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 27786541 - 27786473
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  27786541 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 27786473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 31445671 - 31445739
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  31445671 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 31445739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 41154619 - 41154687
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  41154619 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 41154687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 41155070 - 41155002
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  41155070 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 41155002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 42193781 - 42193849
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  42193781 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 42193849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 45123222 - 45123290
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  45123222 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 45123290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 761395 - 761457
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  761395 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 761457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 7116474 - 7116536
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  7116474 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 7116536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 11174210 - 11174141
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||| |||||||||||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  11174210 tggtcccttaagtttttaattggtatcgctttggtcccttaactaaaaa-aagattgtttgattactttaa 11174141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 26060108 - 26060170
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  26060108 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 26060170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 26060688 - 26060626
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  26060688 cttaaatgctcttttggtcccttaattatttaattggtatcgctttggtcccttaactaaaaa 26060626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 2222021 - 2221960
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  2222021 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 2221960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 13089441 - 13089502
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  13089441 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 13089502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 14724105 - 14724174
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||||| ||||| ||||| |||||| ||||||||  ||| ||| |||||||||||| |||||    
T  14724105 acttaaatgctcttttggtcccttaactttttaattggtatcgttttggtctcttaactaaaaaaaagat 14724174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 762227 - 762159
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||| |||| |||| |||||||||||||||| |||||    
T  762227 cttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaactaaaaaaaagat 762159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 3444176 - 3444108
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||| || ||||| ||||||| |||| || ||||| |||| |||||||||||||||| |||||    
T  3444176 cttaaatgcttttttggtcccttaagtatttaattagtatcgctttggtcccttaactaaaaaaaagat 3444108  T

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Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 9807336 - 9807268
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| |||||    
T  9807336 cttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaactaaaaaaaagat 9807268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 11713626 - 11713558
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | || | |||||||| |||| |||||||||||||||| |||||    
T  11713626 cttaaatgctcttttggtcccttaactattcaattggtatcgctttggtcccttaactaaaaaaaagat 11713558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 22014008 - 22013940
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||  ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  22014008 cttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 22013940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 40229092 - 40229160
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  40229092 cttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 40229160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 40449309 - 40449241
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||| || ||||| ||||||| |||| |||||||| |||| ||| |||||||||||| |||||    
T  40449309 cttaaatgctattttggtcccttaagtatttaattggtatcgctttggtctcttaactaaaaaaaagat 40449241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 44553130 - 44553198
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||  || ||||| ||||||| |||||||||||||  ||| |||||||||||||||| |||||    
T  44553130 cttaaatgcgtttttggtcccttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagat 44553198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 45466349 - 45466281
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||| |||||||||||| |||||    
T  45466349 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcacttaactaaaaaaaagat 45466281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 7812232 - 7812295
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||||| ||||| ||||| | |||| ||||| || |||| ||||||||||||||||    
T  7812232 acttaaatgctcttttggtcccttaactatttaattggtctcgctttggtcccttaactaaaaa 7812295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 9116119 - 9116036
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||| || || || |||||||  ||| ||||||||||||| ||||||||||||| || |||||  ||||| |||||||    
T  9116119 cttaaatgcttttttgatcccttaagtagttaattggtatcactttagtcccttaactaataaaaagattgtttgagtacttta 9116036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 13364052 - 13364119
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||  || ||||| ||||| | ||||||| |||||||||| |||||||||||||||| |||||    
T  13364052 ttaaatgcgtttttggtcccttaaatatttatttagtatcactttggtcccttaactaaaaaaaagat 13364119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 478
Target Start/End: Complemental strand, 30865375 - 30865308
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactt 478  Q
    ||||| ||||||| |||| ||||||||| ||| |||||||||||||||| |||||  ||||| |||||    
T  30865375 tggtcccttaagtatttaattggtatcattttggtcccttaactaaaaaaaagattgtttgagtactt 30865308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 506
Target Start/End: Original strand, 36179461 - 36179567
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    |||||||||| || ||||| |||||||    |||||||||| |||| ||| |||||||||| | | |||  ||| ||||| ||||||||||||| |||||    
T  36179461 cttaaatgcttttttggtcccttaagta---atttggtatcgctttggtctcttaactaaacaaatgattgtttcaatacattaatttaatttttgttac 36179557  T
Q  497 attttttggt 506  Q
    | ||||||||    
T  36179558 actttttggt 36179567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 37035391 - 37035454
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||| ||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  37035391 acttaaatgcgcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 37035454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 13463204 - 13463142
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||| ||||||| | ||| |||||||| |||||||||||| |||| ||||||||| ||||||    
T  13463204 cttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaa 13463142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 14897452 - 14897390
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| |||||  |||| | |||| |||||||| |||| ||||||||||||||||    
T  14897452 cttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaactaaaaa 14897390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 27785968 - 27786030
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| || |||||||||||||    
T  27785968 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaactaaaaa 27786030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 31988516 - 31988578
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  31988516 cttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 31988578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 33099026 - 33098964
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| ||||||||||||||||    
T  33099026 cttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaactaaaaa 33098964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 2087760 - 2087821
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaa 458  Q
    |||||||| |||| | ||||||||||| |||| ||||||||  ||| |||||||||||||||    
T  2087760 cttaaatgttcttttagtctcttaagtatttaattggtatcgttttggtcccttaactaaaa 2087821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 11760441 - 11760510
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||| || |  |||||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  11760441 acttaaatgctattttaatctcttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 11760510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 13094170 - 13094101
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||||| | || |||||| | |||| |||||||| ||||  ||||||||||||||| |||||    
T  13094170 acttaaatgctcttttagtttcttaactatttaattggtatcgctttgttcccttaactaaaaaaaagat 13094101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 40448732 - 40448793
Alignment:
Q  404 gctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||| |||||  |||||| |||| |||||||| |||| |||||||||||||||| |||||    
T  40448732 gctcttttggtccattaagtatttaattggtatcgctttggtcccttaactaaaaaaaagat 40448793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 11129884 - 11129998
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| || |||||  ||| | ||||||||||||||||| |||||    
T  11129884 cttaaatgctcttttggtctcttaagtatttatttggtatcactttggtcccttaactaataaaaagattgtttcagtactttaatttaatttttgttac 11129983  T
Q  497 attttttggttcctt 511  Q
    | |||||||| ||||    
T  11129984 actttttggtccctt 11129998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 477 - 649
Target Start/End: Original strand, 29076632 - 29076804
Alignment:
Q  477 tttaatttaattttcgttacattttttggttccttctgtcaatggattaaccccatatgtcttaggtgcatcaatattatgagtggtccaccataacctt 576  Q
    ||||| ||||||||| |||||   |||||| |||||  ||||| |||||||| || |||||||||||| |||| |||||||||||||||||||||| |||    
T  29076632 tttaagttaattttctttacacaatttggtcccttccatcaattgattaacctcaaatgtcttaggtgaatcagtattatgagtggtccaccataaactt 29076731  T
Q  577 cgttaatttttaaatcttaactatttgttctatttgtcaaaaaataaactatttgatctttgaggtttattgt 649  Q
    | |||| ||| |||||  ||| ||||| | ||||| ||||||||||||| ||| ||||| | |||| ||||||    
T  29076732 cattaactttaaaatcaaaaccatttgatttatttttcaaaaaataaaccattagatctcttaggtatattgt 29076804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 398 - 480
Target Start/End: Original strand, 16329748 - 16329830
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||    
T  16329748 ttaaatgctcttttggtctcttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 16329830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 5381538 - 5381622
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  5381538 cttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 5381622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 12966287 - 12966224
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||||| ||||||||||||| |||| |||||||| |||| ||||||||||||||||    
T  12966287 acttaaatgctcttttggtctcttaagtatttaattggtatcgctttggtcccttaactaaaaa 12966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 10708151 - 10708213
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||| ||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  10708151 cttaaatgcgcttttggtcccttaagtatttatttggtatcactttggtcccttaactaaaaa 10708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 9401122 - 9401190
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||    
T  9401122 cttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagat 9401190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 16712439 - 16712523
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| |||||  |||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  16712439 cttaaatgctcttttggtcctttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 16712523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 5484996 - 5484929
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||||| |||||    
T  5484996 ttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaactaaaaaaaagat 5484929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 20237710 - 20237635
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    |||||||| |||| ||||| ||||||| |||| ||| ||||||||| |||||||||||||||| ||||| ||||||    
T  20237710 cttaaatgttcttctggtcccttaagtatttaattgatatcactttggtcccttaactaaaaaaaagattatttga 20237635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 8885661 - 8885735
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||||  || ||||| ||||||| ||||||||||||| |||| |||||||||||||||| ||||| ||||||    
T  8885661 ttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattatttga 8885735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 11131238 - 11131172
Alignment:
Q  399 taaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||| | ||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||    
T  11131238 taaatgctcttttagtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagat 11131172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 479
Target Start/End: Complemental strand, 14848259 - 14848177
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttt 479  Q
    |||||||||| || ||||| ||||||| |||| ||||||||||||| |||| ||||||||||| |||||  ||||| ||||||    
T  14848259 cttaaatgcttttttggtcccttaagtatttaattggtatcactttggtcctttaactaaaaaaaagattgtttgagtacttt 14848177  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 16330895 - 16330833
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||| | ||||||| ||||||||||||| |||| ||||||||||||||||    
T  16330895 cttaaatgctcttttggccccttaagtatttatttggtatcgctttggtcccttaactaaaaa 16330833  T

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Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 16712903 - 16712841
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||||| |||| |||||||| |||| ||||||||||||||||    
T  16712903 cttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaa 16712841  T

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Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 12602654 - 12602585
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||  || ||||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||    
T  12602654 acttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagat 12602585  T

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Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 4602873 - 4602805
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  4602873 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 4602805  T

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Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 18064485 - 18064401
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| || || ||||||| |||| |||||||| |||| |||| ||||||||||| |||||  ||||| ||||||||    
T  18064485 cttaaatgctcttttgatcccttaagtatttaattggtatcgctttggtccattaactaaaaaaaagattgtttgagtactttaa 18064401  T

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Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 465
Target Start/End: Complemental strand, 19299883 - 19299819
Alignment:
Q  401 aatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||| ||||| ||||| | |||||||||||||||||| |||||||||||||||| |||||    
T  19299883 aatgcgcttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagat 19299819  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 32194885 - 32194817
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  32194885 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 32194817  T

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Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 38806845 - 38806913
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||| ||| |||||||||||||||| |||||    
T  38806845 cttaaatgctcttttggtcccttaactatttaattggtatcattttggtcccttaactaaaaaaaagat 38806913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 39109559 - 39109475
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||  ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  39109559 cttaaatgctctattggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 39109475  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 425 - 480
Target Start/End: Complemental strand, 8030037 - 8029982
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  8030037 tttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 8029982  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 20685631 - 20685714
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||| ||| ||||||||||| | |||||||||||| |||||  |||||||| |||||| |||||  ||||| |||||||    
T  20685631 cttaaatgcgcttttggtctcttaactatttatttggtattactttgttcccttaattaaaaaaaagattgtttgagtacttta 20685714  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 25334664 - 25334597
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| ||||||||||| | |||| |||||||| |||| ||||||||| |||||| |||||    
T  25334664 ttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaattaaaaaaaagat 25334597  T

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Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 28189449 - 28189532
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||  || ||||| ||||| | |||||||||||||||||| |||||||||||||||| || ||  ||||| |||||||    
T  28189449 cttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaatattgtttgagtacttta 28189532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 2970873 - 2970811
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  2970873 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 2970811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 27449319 - 27449392
Alignment:
Q  164 aaaatacacatcaatcttattatatactccaaataatgcatatatagtcattttagatcaaccatacatacatac 238  Q
    |||||||||| ||||| |||||||||||| |||||||||||| |||  ||||||||| |||| ||| ||||||||    
T  27449319 aaaatacacaacaatcatattatatactcaaaataatgcatagata-acattttagaccaacgataaatacatac 27449392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 39107817 - 39107755
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||||||||| | |||| ||||||||  ||| ||||||||||||||||    
T  39107817 cttaaatgctcttttggtctcttaactatttaattggtatcgtttttgtcccttaactaaaaa 39107755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 512
Target Start/End: Complemental strand, 40469152 - 40469038
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttaca 497  Q
    ||||||||  || ||||| ||||| | |||||||||||||||||| ||||||||| |||||| || ||  ||||| |||||||  || || ||||||||     
T  40469152 ttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaattaaaaaaaatattgtttgagtactttatcttcatcttcgttacc 40469053  T
Q  498 ttttttggttccttc 512  Q
    | ||||||| |||||    
T  40469052 tgttttggtcccttc 40469038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 35668979 - 35668895
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||||||||| |||||  |||||| |||| |||||||| |||| |||||||||||||||| || ||  |||||| |||||||    
T  35668979 acttaaatgctctt-tggtcatttaagtatttagttggtatcgctttggtcccttaactaaaaaaaatattgtttgaacactttaa 35668895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 484
Target Start/End: Original strand, 3202666 - 3202754
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaattt 484  Q
    ||||||||| |||| |||||  |||||| |||| | |||||| |||| | |||||||||||||| |||||  ||||| |||||||||||    
T  3202666 acttaaatgttcttttggtcctttaagtatttaataggtatcgcttttgccccttaactaaaaaaaagattgtttgagtactttaattt 3202754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 4844050 - 4844118
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| || ||||||||||||| |||||    
T  4844050 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaactaaaaaaaagat 4844118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 4980303 - 4980219
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| |||||  |||||| |||| ||| ||||| ||| |||| ||||||||||| |||||  ||||| ||||||||    
T  4980303 cttaaatgctcttttggtcctttaagtatttaattgatatcattttagtcctttaactaaaaaaaagattgtttgagtactttaa 4980219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 13479488 - 13479420
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| |||||  |||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  13479488 cttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 13479420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 18469595 - 18469663
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| |||||    
T  18469595 cttaaatgctcttttggtcccttaactatttaattggtatcgttttagtcccttaactaaaaaaaagat 18469663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 18470126 - 18470058
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||| |||| |||| |||||||||||||||| |||||    
T  18470126 cttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaactaaaaaaaagat 18470058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 26424880 - 26424812
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||| |||||| |||||    
T  26424880 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaagat 26424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 34618578 - 34618510
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| | ||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  34618578 cttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 34618510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 40537001 - 40537085
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| |||||  |||||| |||| ||| ||||  ||| |||||||||||||||| |||||  ||||| ||||||||    
T  40537001 cttaaatgctcttttggtcctttaagtatttagttgatatcgttttggtcccttaactaaaaaaaagattgtttgagtactttaa 40537085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 457
Target Start/End: Original strand, 32194445 - 32194504
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaa 457  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||    
T  32194445 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaa 32194504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 40468049 - 40468116
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||| ||||||| | ||| |||||||| |||||||||||| |||| ||||||||| |||||| |||||    
T  40468049 ttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaagat 40468116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 2822735 - 2822669
Alignment:
Q  399 taaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||| || ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  2822735 taaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 2822669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 8444954 - 8445016
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||||| |||| |||| ||| |||  ||||||||||||||||    
T  8444954 cttaaatgctcttttggtcccttaagtatttaattggcatcgcttcggtcccttaactaaaaa 8445016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 471
Target Start/End: Complemental strand, 8893117 - 8893043
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttg 471  Q
    |||||||||  || ||||| ||||||| ||||||||||||  |||| |||||||||||||||  ||||| |||||    
T  8893117 cttaaatgcgtttttggtcccttaagtatttatttggtattgctttggtcccttaactaaaataaagattatttg 8893043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 399 - 465
Target Start/End: Original strand, 15136355 - 15136421
Alignment:
Q  399 taaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||| ||||| ||||| | |||| |||||||| ||||  ||||||||||||||| |||||    
T  15136355 taaatgctcttttggtcccttaactatttaattggtatcgctttgatcccttaactaaaaaaaagat 15136421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 25881994 - 25882056
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||| ||||||| ||||||||||| | |||| |||||||| |||| ||||||||| ||||||    
T  25881994 cttaattgctcttttggtctcttaactatttaattggtatcgctttggtcccttaaataaaaa 25882056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 31557093 - 31557155
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| | ||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  31557093 cttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 31557155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 33200581 - 33200519
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  33200581 cttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 33200519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 38807241 - 38807179
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| |||||  |||| | |||| |||||||| |||| ||||||||||||||||    
T  38807241 cttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaactaaaaa 38807179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 2970337 - 2970398
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaa 458  Q
    ||||||||||||| ||||| ||||| | |||| |||||||  |||| |||||||||||||||    
T  2970337 cttaaatgctcttttggtcacttaactatttaattggtattgctttggtcccttaactaaaa 2970398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 14287835 - 14287895
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| |||||| |||||| |||| ||| |||| |||| ||||||||||||||||    
T  14287835 ttaaatgctcttttggtct-ttaagtatttaattgatatcgctttggtcccttaactaaaaa 14287895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 17978154 - 17978093
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| |||||  |||| | |||| |||||||| |||| ||||||||||||||||    
T  17978154 ttaaatgctcttttggtccattaactatttaattggtatcgctttggtcccttaactaaaaa 17978093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 38536673 - 38536612
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||| ||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  38536673 ttaaatactcttttggtcccttaactatttaattggtatcgctttagtcccttaactaaaaa 38536612  T

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Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 506
Target Start/End: Original strand, 53594986 - 53595095
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    |||||||||  || |||||  |||||| ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||||||||||||||||||    
T  53594986 cttaaatgccattttggtcctttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaatttaattttcgttac 53595085  T
Q  497 attttttggt 506  Q
    ||||||||||    
T  53595086 attttttggt 53595095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 397 - 512
Target Start/End: Complemental strand, 2735657 - 2735543
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||| ||||| ||||| | ||||||||||||| |||| |||| ||||||||||| |||||  ||| |  ||||||||||||||||||||||    
T  2735657 cttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcctttaactaaaaaaaagat-tttttagcactttaatttaattttcgttac 2735559  T
Q  497 attttttggttccttc 512  Q
    |||||||||| |||||    
T  2735558 attttttggtcccttc 2735543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 34543109 - 34543025
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||| ||||| ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||||||||||||    
T  34543109 cttaaatactcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgaatactttaa 34543025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 397 - 515
Target Start/End: Complemental strand, 45046964 - 45046846
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||| ||| |||||  |||| | |||||||||||||  ||| |||||||||||||||| |||||  |||||||||||||  || |||| ||||||    
T  45046964 cttaaatgcgcttttggtcctttaactatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgaatactttatctttatttccgttac 45046865  T
Q  497 attttttggttccttctgt 515  Q
     | ||||||| ||||||||    
T  45046864 ctattttggtcccttctgt 45046846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 9091426 - 9091494
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||||| ||||||||| ||| |||| |||||||||||||||| |||||    
T  9091426 cttaaatgctcttttggtcccttaagtatttatttggaatcgctttggtcccttaactaaaaaaaagat 9091494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 22679635 - 22679719
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  22679635 cttaaatgctcttttggtcccttaactatttaattggtatcgctttagtcccttaactaaaaaaaagattgtttgagtactttaa 22679719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 43292017 - 43291949
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||||| |||||    
T  43292017 cttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaactaaaaaaaagat 43291949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 44304418 - 44304350
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||||||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  44304418 cttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 44304350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 472
Target Start/End: Original strand, 31487980 - 31488055
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| ||||| ||||||    
T  31487980 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagattatttga 31488055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 480
Target Start/End: Original strand, 43629182 - 43629264
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||||| ||||||||||||| |||||||||||||  ||| || ||||||||||||| || ||  ||||| |||||||    
T  43629182 ttaaatgctcttttggtctcttaagtatttatttggtatcgttttggttccttaactaaaaaaaaaattgtttgagtacttta 43629264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 452
Target Start/End: Complemental strand, 53595225 - 53595167
Alignment:
Q  394 aaacttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    |||||||||||||||| ||||| | ||||| |||||||||||||||||| |||||||||    
T  53595225 aaacttaaatgctcttttggtcccgtaagtatttatttggtatcactttggtcccttaa 53595167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 17259529 - 17259460
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||||| ||||||||||| | |||| || ||||| |||| |||||||||||||||| |||||    
T  17259529 acttaaatgctcttttggtctcttaactatttaatttgtatcgctttggtcccttaactaaaaaaaagat 17259460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 1098055 - 1098123
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  1098055 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 1098123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 484
Target Start/End: Original strand, 14525458 - 14525542
Alignment:
Q  401 aatgctcttgtggtctcttaagtttttatttggtatcactttcg-tcccttaactaaaaataagatcatttgaatactttaattt 484  Q
    ||||||||| |||||||||| || |||| |||||||| |||| | |||| |||||||||| |||||  |||||||||||||||||    
T  14525458 aatgctcttttggtctcttacgtatttaattggtatcgcttttggtcccataactaaaaaaaagattgtttgaatactttaattt 14525542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 14525993 - 14525909
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| || || ||||| | |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  14525993 cttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 14525909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 17475399 - 17475467
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  17475399 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 17475467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 17475939 - 17475871
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  17475939 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 17475871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 20614672 - 20614604
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  20614672 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 20614604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 25618438 - 25618506
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  25618438 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 25618506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 40256100 - 40256184
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||| |||| ||||| ||||||| |||| |||||||  |||| |||||||||||||||| |||||  ||| ||||||||||    
T  40256100 cttaaatgatcttttggtcccttaagtatttaattggtattgctttggtcccttaactaaaaaaaagattgtttaaatactttaa 40256184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 41610129 - 41610197
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  41610129 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 41610197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 42369565 - 42369497
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  42369565 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 42369497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 480
Target Start/End: Complemental strand, 53596206 - 53596122
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||| |||| ||||| ||||||| |||||||||||||  ||| || ||||||||||||| |||||  ||||| |||||||    
T  53596206 acttaaatgttcttttggtcccttaagtatttatttggtatcgttttggttccttaactaaaaaaaagattgtttgagtacttta 53596122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 56271272 - 56271204
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  56271272 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 56271204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 14947188 - 14947255
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| ||||| ||||||| |||| |||||||| ||||  ||||||||||||||| |||||    
T  14947188 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttgatcccttaactaaaaaaaagat 14947255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 456
Target Start/End: Original strand, 22813360 - 22813419
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaa 456  Q
    ||||||||||||| ||||  ||||||| |||| ||||||||||||| |||||||||||||    
T  22813360 cttaaatgctcttttggttccttaagtatttaattggtatcactttggtcccttaactaa 22813419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 34237484 - 34237551
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  34237484 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 34237551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 425 - 512
Target Start/End: Original strand, 40680496 - 40680582
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttacattttttggttccttc 512  Q
    |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||  || || |||||||| | ||||||| |||||    
T  40680496 tttatttggtatcactttggtcccttaactaaaaa-aagattgtttgagtactttatcttcatcttcgttacctgttttggtcccttc 40680582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 44182564 - 44182647
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||||| | |||||  |||||| |||||||||||||  ||| |||||||||||||||| |||||  ||||| |||||||    
T  44182564 cttaaatgctcatttggtcctttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtacttta 44182647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 48453636 - 48453703
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  48453636 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 48453703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 50282983 - 50282924
Alignment:
Q  400 aaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||| |||| ||||| ||||||| ||||||||||||| |||| ||||||||||||||||    
T  50282983 aaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaa 50282924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 480
Target Start/End: Original strand, 2734800 - 2734882
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||| |||| ||||| ||||||| ||||||| |||||  ||| |||||||||||||||| |||||  ||||| |||||||    
T  2734800 ttaaatgttcttttggtcccttaagtatttattttgtatcgttttggtcccttaactaaaaaaaagattgtttgagtacttta 2734882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 25619148 - 25619086
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||| |||| ||||||||||| | |||| |||||||| |||| ||||||||||||||||    
T  25619148 cttaaatgttcttttggtctcttaactatttaattggtatcgctttggtcccttaactaaaaa 25619086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 27739375 - 27739437
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||| ||||||| | ||||||||||||||||||| ||||||||||  |||||||| ||||||    
T  27739375 cttaattgctcttttcgtctcttaagtttttatttagtatcactttgatcccttaagtaaaaa 27739437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 48454061 - 48453999
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| ||| ||||||||| ||||||||||||||||    
T  48454061 cttaaatgctcttttggtcccttaactatttaattgatatcactttggtcccttaactaaaaa 48453999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 480
Target Start/End: Complemental strand, 26281292 - 26281223
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||| ||||||| |||||||||||||  ||| |||||||||||||||| |||||  ||||| |||||||    
T  26281292 tggtcccttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtacttta 26281223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 46058698 - 46058759
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  46058698 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 46058759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 48092032 - 48091947
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||| || || ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||  |||||| |||||||    
T  48092032 acttaaatactattttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgaagactttaa 48091947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 1098452 - 1098384
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||  ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  1098452 cttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 1098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 17258868 - 17258936
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||  |||| |||||||||||||||| |||||    
T  17258868 cttaaatgctcttttggtcccttaactatttaattggtattgctttggtcccttaactaaaaaaaagat 17258936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 22680158 - 22680074
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||| | || ||||| |||||||  ||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  22680158 cttaaatgttattttggtcccttaagtagttaattggtatccctttggtcccttaactaaaaaaaagattgtttgagtactttaa 22680074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 24045367 - 24045435
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||| |||||||||||| |||||    
T  24045367 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaactaaaaaaaagat 24045435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 24297191 - 24297151
Alignment:
Q  419 taagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  24297191 taagtatttatttggtatcactttggtcccttaactaaaaa 24297151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 26673179 - 26673111
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||| |||| |||| |||||||||||||||| |||||    
T  26673179 cttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaactaaaaaaaagat 26673111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 28504579 - 28504647
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| ||||  ||||||||||||||| |||||    
T  28504579 cttaaatgctcttttggtcccttaactatttaattggtatcgctttgatcccttaactaaaaaaaagat 28504647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 31262280 - 31262212
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||| | |||| |||||||||||||||| |||||    
T  31262280 cttaaatgctcttttggtcccttaattatttaattggtaccgctttggtcccttaactaaaaaaaagat 31262212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 39321057 - 39321125
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||| |||||||||||| |||||    
T  39321057 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaactaaaaaaaagat 39321125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 40681557 - 40681489
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||| ||||||| | ||| |||||||| |||||||||||| |||| ||||||||| |||||| |||||    
T  40681557 cttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaagat 40681489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 41845928 - 41845860
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||| |||| |||| |||||||||||||||| |||||    
T  41845928 cttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaactaaaaaaaagat 41845860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 44303517 - 44303585
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||| |||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  44303517 cttaaatgttcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 44303585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 24045902 - 24045835
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| || || ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  24045902 ttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 24045835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 28505128 - 28505061
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| ||||| ||||| | |||| ||| |||| |||| |||||||||||||||| |||||    
T  28505128 ttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaactaaaaaaaagat 28505061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 49906062 - 49906011
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtccc 448  Q
    ||||||||||||| ||||| ||||||| ||||||| ||||| ||||||||||    
T  49906062 cttaaatgctcttttggtcccttaagtatttatttagtatcgctttcgtccc 49906011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 11815862 - 11815924
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||  ||| ||||| ||||| | ||||||||||||| |||| ||||||||||||||||    
T  11815862 cttaaatgtgcttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaa 11815924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 14251198 - 14251248
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcc 447  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| ||||    
T  14251198 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcc 14251248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 14947743 - 14947681
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||| |||| ||||| ||||||| |||| |||||||| |||| ||| ||||||||||||    
T  14947743 cttaaatgttcttttggtcccttaagtatttaattggtatcgctttggtctcttaactaaaaa 14947681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 41845503 - 41845565
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| |  ||| |||||||| |||| ||||||||||||||||    
T  41845503 cttaaatgctcttttggtcccttaactaattaattggtatcgctttggtcccttaactaaaaa 41845565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 46307558 - 46307620
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| ||||  |||||||||||||||    
T  46307558 cttaaatgctcttttggtcccttaactatttaattggtatcgctttgatcccttaactaaaaa 46307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 3504024 - 3503963
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| || || ||||| | |||| |||||||| |||| ||||||||||||||||    
T  3504024 ttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaactaaaaa 3503963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 46308094 - 46308025
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||| |||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| |||||    
T  46308094 acttaaatgttcttttggtcccttaactatttaattggtatcgttttggtcccttaactaaaaaaaagat 46308025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 475
Target Start/End: Complemental strand, 51624553 - 51624476
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaata 475  Q
    ||||||| |||| ||||||||||||| |||| ||| |||| ||||  |||||||| |||||| |||||  ||||||||    
T  51624553 ttaaatgttcttttggtctcttaagtatttaattgatatcgctttgatcccttaattaaaaaaaagattgtttgaata 51624476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 677
Target Start/End: Complemental strand, 22057393 - 22057191
Alignment:
Q  476 ctttaatttaattttcgttacat-tttttggttccttctgtcaatggattaaccccatatgtcttaggtgcatcaatattatgagtggtccaccataacc 574  Q
    ||||||||| ||||| ||||||  ||||| || ||||| ||||| |  ||||||||| ||||||||||||   |||||||||| ||  | |||||||| |    
T  22057393 ctttaattttatttttgttacacatttttagtcccttccgtcaaggagttaaccccaaatgtcttaggtgagccaatattatgggtaatacaccataaac 22057294  T
Q  575 ttcgttaatttttaaatcttaactatttgttctatttgtcaaaaaataaactatttgatctttgaggtttattgtaagtaacaatgcactatgaccacct 674  Q
    ||| ||||| ||| |||||||| | |||| ||||||||||||| ||||||| ||| ||| |   |||| |||||||||||| |||| ||||| |||||||    
T  22057293 ttcattaatattttaatcttaattgtttgatctatttgtcaaataataaaccattggatatagaaggtctattgtaagtaataatgtactatcaccacct 22057194  T
Q  675 aat 677  Q
    |||    
T  22057193 aat 22057191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 398 - 506
Target Start/End: Complemental strand, 8685948 - 8685841
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttaca 497  Q
    |||||||||||| || |  ||||||| |||||||||||||  ||| ||||||||||||||| ||||| | ||||| ||||||||||||||||||||||||    
T  8685948 ttaaatgctcttttgattccttaagtatttatttggtatcgttttggtcccttaactaaaa-taagaccgtttgagtactttaatttaattttcgttaca 8685850  T
Q  498 ttttttggt 506  Q
     | ||||||    
T  8685849 ctatttggt 8685841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 397 - 506
Target Start/End: Original strand, 17236066 - 17236175
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||| |||||  |||||| ||||||||||||| |||| | |||||||||||||| |||||  ||||| ||||||| ||| || | ||||||    
T  17236066 cttaaatgctcttttggtcctttaagtatttatttggtatcgctttggccccttaactaaaaaaaagattgtttgagtactttatttttatctccgttac 17236165  T
Q  497 attttttggt 506  Q
    || |||||||    
T  17236166 atgttttggt 17236175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 23140308 - 23140240
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||||| |||||    
T  23140308 cttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaactaaaaaaaagat 23140240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 32072300 - 32072384
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| ||||| ||||||| |||| ||| |||| |||| |||||||||||||||| |||||  |||||| |||||||    
T  32072300 cttaaatgctcttttggtcccttaagtatttaattgatatcgctttggtcccttaactaaaaaaaagattgtttgaacactttaa 32072384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 36721049 - 36720965
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| ||||| ||||||| |||| ||| |||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  36721049 cttaaatgctcttttggtcccttaagtatttaattgatatcgctttggtcccttaactaaaaaaaagattgtttgactactttaa 36720965  T

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Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 3217810 - 3217735
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| ||||| ||||||    
T  3217810 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagattatttga 3217735  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 16955933 - 16956015
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||||| ||| ||||| ||||| | |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  16955933 cttaaatgcgcttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaa-aagattgtttgagtacttta 16956015  T

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Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 17278401 - 17278484
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||  || ||||| ||||| | |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  17278401 cttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 17278484  T

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Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 30765670 - 30765753
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||  || ||||| ||||| | |||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||    
T  30765670 cttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtacttta 30765753  T

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Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 30474306 - 30474396
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttacattttttggttccttctgt 515  Q
    ||||| ||||||| |||| |||||||||||||||| |||||  |||||||||||||  || || | |||||| | ||||||||||||||||    
T  30474306 tttatctggtatcgctttggtcccttaactaaaaaaaagattgtttgaatactttatctttatctccgttacctattttggttccttctgt 30474396  T

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Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 452
Target Start/End: Original strand, 42754535 - 42754593
Alignment:
Q  394 aaacttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    |||||||||||||||| | ||| ||||||| |||||||||||||||||| |||||||||    
T  42754535 aaacttaaatgctcttttcgtcccttaagtatttatttggtatcactttggtcccttaa 42754593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 43705445 - 43705379
Alignment:
Q  399 taaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||||| |||||    
T  43705445 taaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaactaaaaaaaagat 43705379  T

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Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 411 - 472
Target Start/End: Complemental strand, 14683036 - 14682975
Alignment:
Q  411 tggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||||||| | ||||||||||||| |||| |||||||||||||||| ||||| ||||||    
T  14683036 tggtctcttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttga 14682975  T

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Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 397 - 478
Target Start/End: Complemental strand, 28461041 - 28460960
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactt 478  Q
    |||||||| |||| ||||| ||||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||| |||||    
T  28461041 cttaaatgttcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactt 28460960  T

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Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 712531 - 712599
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| ||| ||||||||||||||||| |||||    
T  712531 cttaaatgctcttttggtcccttaactatttaattggtatcgcttacgtcccttaactaaaaaaaagat 712599  T

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Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 7777013 - 7776945
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  7777013 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 7776945  T

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Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 14681899 - 14681967
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||| ||| || || ||||| | ||||||||||||| |||| ||||||||||||||||||||||    
T  14681899 cttaaatgcgcttttgatcccttaattatttatttggtatcgctttggtcccttaactaaaaataagat 14681967  T

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Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 27284244 - 27284312
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  27284244 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 27284312  T

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Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 27284665 - 27284597
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  27284665 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 27284597  T

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Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 31852138 - 31852070
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  31852138 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 31852070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 37374513 - 37374445
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  37374513 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 37374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 39143567 - 39143499
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  39143567 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 39143499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 40852216 - 40852148
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  40852216 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 40852148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 45456736 - 45456804
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  45456736 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 45456804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 47987329 - 47987397
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  47987329 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 47987397  T

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Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 18458830 - 18458763
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  18458830 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 18458763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 32072748 - 32072665
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||||||| || || ||||||| |||| |||||||| ||||  ||||||||||||||| |||||  ||||| ||||||||    
T  32072748 ttaaatgctcttttgatcccttaagtatttaattggtatcgctttgatcccttaactaaaaaaaagattgtttgagtactttaa 32072665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 36720501 - 36720568
Alignment:
Q  417 cttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaattt 484  Q
    ||||||| |||| |||||||| |||| |||||||||||||||| |||||  ||||| |||||||||||    
T  36720501 cttaagtatttagttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaattt 36720568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 472
Target Start/End: Original strand, 36951058 - 36951133
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| || ||||||||||||| ||||| ||||||    
T  36951058 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaactaaaaaaaagattatttga 36951133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 472
Target Start/End: Original strand, 40851772 - 40851847
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttga 472  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| || ||||||||||||| |||||| |||||    
T  40851772 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaactaaaaaaaagatcgtttga 40851847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 44333002 - 44333069
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||| |||||  |||||| |||| |||||||| |||| |||||||||||||||| |||||    
T  44333002 ttaaatgctcttttggtcctttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagat 44333069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 44495704 - 44495767
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||||| ||||| ||||||| |||| ||||||||| ||| ||||||||| ||||||    
T  44495704 acttaaatgctcttttggtcccttaagtatttaattggtatcattttggtcccttaattaaaaa 44495767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 20493747 - 20493809
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  20493747 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 20493809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 21433104 - 21433042
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| |||||  |||||| |||| |||||||| |||| ||||||||||||||||    
T  21433104 cttaaatgctcttttggtccattaagtatttaattggtatcgctttggtcccttaactaaaaa 21433042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 24733631 - 24733693
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  24733631 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 24733693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 34621841 - 34621779
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||||| |||| |||||||| |||| ||| ||||||||||||    
T  34621841 cttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtctcttaactaaaaa 34621779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 515
Target Start/End: Original strand, 42753916 - 42754033
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaatttaattttcgttac 496  Q
    ||||||||||||| ||| | ||||||| ||||||||||||| ||||  ||| ||||||||||| |||||  ||||| |||||||  || || | ||||||    
T  42753916 cttaaatgctcttttggcc-cttaagtatttatttggtatcgctttgatcctttaactaaaaaaaagattgtttgagtactttatctttatctccgttac 42754014  T
Q  497 attttttggttccttctgt 515  Q
     | ||||||| ||||||||    
T  42754015 ctgttttggtcccttctgt 42754033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 25443003 - 25443064
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||| ||| ||||| |||| || |||||||| ||||||||| ||||||||||||||||    
T  25443003 ttaaatgcgcttttggtcccttaggtatttatttgatatcactttagtcccttaactaaaaa 25443064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 29414549 - 29414480
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||||| ||||| ||||| | |||| | |||||| |||| |||||||||||||||| |||||    
T  29414549 acttaaatgctcttttggtcccttaactatttaataggtatcgctttggtcccttaactaaaaaaaagat 29414480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 45995268 - 45995337
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||| |||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  45995268 acttaaatgttcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 45995337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 5905760 - 5905692
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||||||||| | |||| |||||||| ||||  |||||||||||| || |||||    
T  5905760 cttaaatgctcttttggtctcttaactatttaattggtatcgctttgatcccttaactaacaaaaagat 5905692  T

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Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 27383622 - 27383538
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||||||||||| || || ||||||| |||| |||||||  |||| |||||||||||||||  |||||  ||||| ||||||||    
T  27383622 cttaaatgctcttttgatcccttaagtatttaattggtattgctttggtcccttaactaaaataaagattgtttgagtactttaa 27383538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 465
Target Start/End: Complemental strand, 30766720 - 30766672
Alignment:
Q  417 cttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||| ||||||||||||||||| ||||||||| |||||| |||||    
T  30766720 cttaagttattatttggtatcactttggtcccttaagtaaaaaaaagat 30766672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 39143148 - 39143216
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||  ||| |||||||||||||||| |||||    
T  39143148 cttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaactaaaaaaaagat 39143216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 45457160 - 45457092
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||| |||||| |||||    
T  45457160 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaagat 45457092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 29933764 - 29933682
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||||||| ||||| || |||| |||| ||| |||| |||| |||||||||||||||| | ||| |||||| ||||||||    
T  29933764 ttaaatgctcttttggtccct-aagtatttaattgatatcgctttggtcccttaactaaaaaaacgattatttgagtactttaa 29933682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 30475226 - 30475143
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    |||||||||  || || |||||||| | |||||||||||||  ||| |||||||||||||||| |||||  ||||| |||||||    
T  30475226 cttaaatgcgtttttgatctcttaattatttatttggtatcgatttggtcccttaactaaaaaaaagattgtttgagtacttta 30475143  T

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Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 38444906 - 38444851
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaa 452  Q
    ||||||||||||| ||| | ||||||| |||| ||||||||||||| |||||||||    
T  38444906 cttaaatgctcttttggccccttaagtatttaattggtatcactttggtcccttaa 38444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 13965042 - 13965100
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaacta 455  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||    
T  13965042 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaacta 13965100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 37373968 - 37374030
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| ||| |||| |||| ||||||||||||||||    
T  37373968 cttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaactaaaaa 37374030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 42287868 - 42287806
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||| ||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  42287868 cttaaatactcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 42287806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 48095418 - 48095356
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  48095418 cttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 48095356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 660
Target Start/End: Complemental strand, 16887663 - 16887586
Alignment:
Q  583 tttttaaatcttaactatttgttctatttgtcaaaaaataaactatttgatctttgaggtttattgtaagtaacaatg 660  Q
    ||||| ||||||||  ||||| ||||||| ||||||||||||  ||||||||||  |||| |||||||  ||||||||    
T  16887663 ttttttaatcttaatcatttgatctatttatcaaaaaataaatcatttgatcttgaaggtctattgtatctaacaatg 16887586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 28460566 - 28460627
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||| ||||| ||||||| |||| ||||||||  ||| |||| |||||||||||    
T  28460566 ttaaatgctcttttggtcccttaagtatttaattggtatcgttttggtcctttaactaaaaa 28460627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 397 - 479
Target Start/End: Original strand, 3840 - 3922
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttt 479  Q
    ||||||||||||| || || ||||||| |||| |||||| | |||| |||||||||||||||| ||||| |||||||||||||    
T  3840 cttaaatgctcttttgatcccttaagtatttaattggtaccgctttggtcccttaactaaaaaaaagattatttgaatacttt 3922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 479
Target Start/End: Complemental strand, 4361 - 4307
Alignment:
Q  425 tttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttt 479  Q
    |||| ||||||||||||| |||||||||||||||| |||||  ||||| ||||||    
T  4361 tttaattggtatcactttagtcccttaactaaaaaaaagattgtttgagtacttt 4307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 242217 - 242149
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||||| |||||    
T  242217 cttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaactaaaaaaaagat 242149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 218218 - 218135
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    |||||||||||| ||||| ||||||| |||| ||||||||  ||| |||||||||||||||| |||||  ||||| ||||||||    
T  218218 ttaaatgctcttttggtcccttaagtatttaattggtatcgttttggtcccttaactaaaaaaaagattgtttgagtactttaa 218135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 478
Target Start/End: Original strand, 217595 - 217667
Alignment:
Q  406 tcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactt 478  Q
    |||| ||||| ||||||| |||| |||||||  |||| |||||||||||||||| ||||| |||||| |||||    
T  217595 tcttttggtcccttaagtatttaattggtattgctttggtcccttaactaaaaaaaagattatttgattactt 217667  T

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Target: scaffold0027 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 40094 - 40156
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||||| |||| |||||||||||||  |||||||||||||||    
T  40094 cttaaatgctcttttggtcccttaagtatttaattggtatcactttgctcccttaactaaaaa 40156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 283230 - 283162
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  283230 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 283162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 428980 - 429039
Alignment:
Q  405 ctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataaga 464  Q
    ||||| ||||| |||||||| |||||||||||| |||| ||||||||| |||||| ||||    
T  428980 ctcttttggtcccttaagttattatttggtatcgctttggtcccttaaataaaaaaaaga 429039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 12064 - 12127
Alignment:
Q  417 cttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||| ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||    
T  12064 cttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 12127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 38904 - 38967
Alignment:
Q  417 cttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatacttta 480  Q
    ||||||| ||||||||||||| |||| |||||||||||||||| |||||  ||||| |||||||    
T  38904 cttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 38967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 59741 - 59803
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||||||  ||||  |||||| |||| ||||||||||||| ||||||||||||||||    
T  59741 cttaaatgctctttgggtcctttaagtatttagttggtatcactttggtcccttaactaaaaa 59803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 1477 - 1539
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    ||||||||||||| ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  1477 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 1539  T

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Target: scaffold0360 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 12074 - 12143
Alignment:
Q  396 acttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||||||| ||||| ||||||| || | |||| ||| |||| |||||||||||||||| |||||    
T  12074 acttaaatgctcttttggtcccttaagtattgaattggcatcgctttggtcccttaactaaaaaaaagat 12143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 57614 - 57530
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagatcatttgaatactttaa 481  Q
    ||||| || |||| ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||  ||||| ||||||||    
T  57614 cttaattgttcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 57530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 83442 - 83374
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaataagat 465  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| |||||||||||||||| |||||    
T  83442 cttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagat 83374  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 25965 - 26016
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtccc 448  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| |||| |||||    
T  25965 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 26016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 14759 - 14697
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||  || ||||| ||||||| |||||||| |||| |||| ||||||||||||||||    
T  14759 cttaaatgcgtttttggtcccttaagtatttatttgatatcgctttggtcccttaactaaaaa 14697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 230874 - 230936
Alignment:
Q  397 cttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||||||||| || ||||| ||||| | |||| |||||||| |||| ||||||||||||||||    
T  230874 cttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaa 230936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 629
Target Start/End: Complemental strand, 18536 - 18447
Alignment:
Q  540 aggtgcatcaatattatgagtggtccaccataaccttcgttaatttttaaatcttaactatttgttctatttgtcaaaaaataaactatt 629  Q
    ||||| |||||||||||  || ||||||||||  |||| ||||||||| |||| ||||  |||| | || |||||||||||| |||||||    
T  18536 aggtggatcaatattataggtagtccaccatagacttcattaattttttaatcataaccgtttgatataattgtcaaaaaattaactatt 18447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 459
Target Start/End: Original strand, 90163 - 90224
Alignment:
Q  398 ttaaatgctcttgtggtctcttaagtttttatttggtatcactttcgtcccttaactaaaaa 459  Q
    |||| ||||||| | ||| |||||||||||| || |||||||||| ||||||||| ||||||    
T  90163 ttaattgctctttttgtcccttaagtttttacttcgtatcactttggtcccttaagtaaaaa 90224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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