View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9591_low_2 (Length: 251)

Name: NF9591_low_2
Description: NF9591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9591_low_2
NF9591_low_2
[»] chr4 (48 HSPs)
chr4 (25-224)||(4275483-4275682)
chr4 (46-224)||(50605455-50605633)
chr4 (46-225)||(53369061-53369240)
chr4 (46-224)||(19850132-19850310)
chr4 (46-224)||(48977004-48977182)
chr4 (52-224)||(9469428-9469599)
chr4 (46-218)||(49820384-49820556)
chr4 (46-225)||(21436306-21436485)
chr4 (57-224)||(43386534-43386701)
chr4 (57-205)||(51409087-51409235)
chr4 (46-222)||(45674306-45674470)
chr4 (46-225)||(44792755-44792922)
chr4 (46-153)||(36543365-36543472)
chr4 (96-224)||(25133933-25134061)
chr4 (71-227)||(55892665-55892814)
chr4 (50-227)||(22183760-22183937)
chr4 (57-178)||(28266717-28266838)
chr4 (72-205)||(24009418-24009551)
chr4 (83-224)||(40797154-40797295)
chr4 (88-225)||(51994082-51994219)
chr4 (50-179)||(52813044-52813173)
chr4 (48-230)||(36156874-36157057)
chr4 (57-224)||(52705593-52705760)
chr4 (62-206)||(46945153-46945297)
chr4 (46-144)||(12790125-12790218)
chr4 (83-224)||(50240893-50241034)
chr4 (89-224)||(79760-79894)
chr4 (57-224)||(12673640-12673808)
chr4 (135-218)||(7505430-7505513)
chr4 (64-206)||(1803185-1803327)
chr4 (50-206)||(32398343-32398500)
chr4 (57-178)||(44377651-44377772)
chr4 (80-224)||(18990192-18990336)
chr4 (65-216)||(11055819-11055965)
chr4 (149-215)||(9222840-9222906)
chr4 (48-227)||(54742080-54742261)
chr4 (45-178)||(16743080-16743213)
chr4 (86-178)||(50711443-50711535)
chr4 (48-140)||(48340210-48340303)
chr4 (150-225)||(48732022-48732097)
chr4 (67-121)||(6874934-6874988)
chr4 (43-224)||(5769715-5769896)
chr4 (52-101)||(48731976-48732025)
chr4 (146-218)||(22720750-22720822)
chr4 (27-74)||(49084565-49084612)
chr4 (43-224)||(5765171-5765351)
chr4 (43-224)||(5767415-5767595)
chr4 (159-224)||(12790221-12790286)
[»] chr1 (42 HSPs)
chr1 (24-230)||(45654308-45654513)
chr1 (24-224)||(21681562-21681762)
chr1 (46-228)||(36418516-36418698)
chr1 (63-224)||(32179333-32179494)
chr1 (62-183)||(37441791-37441912)
chr1 (48-224)||(45582063-45582239)
chr1 (83-227)||(7955646-7955790)
chr1 (57-226)||(24575298-24575467)
chr1 (57-206)||(15257819-15257968)
chr1 (46-224)||(24470488-24470654)
chr1 (62-227)||(29678082-29678247)
chr1 (57-226)||(5205082-5205252)
chr1 (48-224)||(14578995-14579171)
chr1 (46-223)||(35309009-35309182)
chr1 (48-224)||(14770827-14771003)
chr1 (102-225)||(38061637-38061760)
chr1 (83-224)||(39577641-39577782)
chr1 (87-224)||(48575739-48575876)
chr1 (57-224)||(43090005-43090167)
chr1 (48-218)||(23916137-23916306)
chr1 (57-206)||(7994764-7994912)
chr1 (48-224)||(7595720-7595896)
chr1 (132-224)||(28005735-28005827)
chr1 (48-224)||(35810110-35810285)
chr1 (87-226)||(40002318-40002457)
chr1 (64-142)||(38061570-38061648)
chr1 (84-183)||(13645716-13645815)
chr1 (64-224)||(31868894-31869049)
chr1 (48-216)||(15662298-15662466)
chr1 (48-224)||(46265572-46265746)
chr1 (117-225)||(7840739-7840846)
chr1 (83-178)||(3576984-3577079)
chr1 (65-200)||(15305906-15306041)
chr1 (95-178)||(36118271-36118353)
chr1 (72-225)||(42936494-42936649)
chr1 (83-178)||(44595870-44595964)
chr1 (146-224)||(47603471-47603549)
chr1 (26-179)||(671893-672046)
chr1 (46-105)||(47603411-47603470)
chr1 (131-190)||(50445516-50445575)
chr1 (77-137)||(14188016-14188076)
chr1 (146-178)||(42936376-42936408)
[»] chr7 (42 HSPs)
chr7 (46-227)||(36926406-36926587)
chr7 (46-224)||(5776527-5776705)
chr7 (46-226)||(7443827-7444007)
chr7 (46-221)||(3931310-3931486)
chr7 (46-218)||(666178-666350)
chr7 (46-218)||(26215723-26215895)
chr7 (46-224)||(37333697-37333876)
chr7 (46-224)||(42071520-42071698)
chr7 (46-224)||(43052282-43052460)
chr7 (50-226)||(222909-223085)
chr7 (49-224)||(7539616-7539791)
chr7 (46-144)||(388495-388593)
chr7 (71-230)||(5795493-5795640)
chr7 (57-218)||(17025970-17026132)
chr7 (46-224)||(49035027-49035205)
chr7 (52-144)||(15433697-15433789)
chr7 (57-224)||(20400173-20400339)
chr7 (46-144)||(28950267-28950366)
chr7 (49-178)||(8110805-8110934)
chr7 (107-224)||(20259953-20260070)
chr7 (57-206)||(33899578-33899727)
chr7 (25-191)||(8390079-8390245)
chr7 (57-183)||(18250619-18250745)
chr7 (57-206)||(45054811-45054960)
chr7 (62-175)||(22074610-22074723)
chr7 (57-181)||(11596405-11596524)
chr7 (48-218)||(37106152-37106323)
chr7 (51-178)||(18740826-18740953)
chr7 (52-191)||(35544137-35544275)
chr7 (92-175)||(39429503-39429586)
chr7 (46-224)||(45174637-45174792)
chr7 (146-224)||(30918930-30919008)
chr7 (48-177)||(23224439-23224571)
chr7 (149-230)||(26719153-26719229)
chr7 (48-224)||(37402000-37402176)
chr7 (57-178)||(41449193-41449314)
chr7 (48-224)||(17608028-17608204)
chr7 (161-218)||(42012255-42012312)
chr7 (83-178)||(23236781-23236876)
chr7 (174-224)||(27232473-27232523)
chr7 (151-216)||(31490705-31490770)
chr7 (172-224)||(46574306-46574358)
[»] chr3 (37 HSPs)
chr3 (46-226)||(39471041-39471221)
chr3 (46-216)||(32688567-32688737)
chr3 (50-227)||(52198773-52198950)
chr3 (50-218)||(38644191-38644358)
chr3 (49-190)||(39943697-39943838)
chr3 (48-228)||(33439207-33439386)
chr3 (83-216)||(25252882-25253015)
chr3 (52-224)||(46294205-46294377)
chr3 (57-224)||(54432864-54433019)
chr3 (57-224)||(5418043-5418210)
chr3 (83-224)||(33895916-33896057)
chr3 (46-224)||(7029135-7029312)
chr3 (46-144)||(23206899-23206997)
chr3 (57-206)||(40942913-40943061)
chr3 (48-225)||(53530121-53530297)
chr3 (84-224)||(30740732-30740872)
chr3 (46-226)||(41609312-41609478)
chr3 (46-218)||(7834068-7834237)
chr3 (109-192)||(39133810-39133893)
chr3 (64-225)||(45714114-45714263)
chr3 (63-226)||(27040523-27040686)
chr3 (48-224)||(54394017-54394181)
chr3 (57-188)||(12710096-12710227)
chr3 (103-215)||(20407769-20407881)
chr3 (93-154)||(15823189-15823250)
chr3 (67-226)||(45994789-45994947)
chr3 (57-175)||(7521713-7521831)
chr3 (83-215)||(51067701-51067833)
chr3 (118-206)||(52934244-52934332)
chr3 (51-224)||(19561374-19561542)
chr3 (57-189)||(20661709-20661842)
chr3 (53-178)||(8086903-8087028)
chr3 (57-206)||(30662736-30662885)
chr3 (147-185)||(35007267-35007305)
chr3 (131-179)||(9505888-9505936)
chr3 (114-178)||(39714828-39714892)
chr3 (156-200)||(49026015-49026059)
[»] chr2 (27 HSPs)
chr2 (46-226)||(36538075-36538255)
chr2 (46-218)||(20986070-20986242)
chr2 (54-228)||(27633138-27633312)
chr2 (46-177)||(41958594-41958725)
chr2 (46-215)||(26435776-26435945)
chr2 (52-201)||(12139389-12139538)
chr2 (46-227)||(33830887-33831056)
chr2 (50-225)||(44741262-44741437)
chr2 (57-224)||(2647573-2647740)
chr2 (46-223)||(33164526-33164691)
chr2 (75-189)||(39801156-39801270)
chr2 (48-224)||(34116717-34116894)
chr2 (48-178)||(38410202-38410332)
chr2 (71-224)||(11027287-11027440)
chr2 (48-176)||(39689603-39689731)
chr2 (57-175)||(40458381-40458499)
chr2 (48-140)||(30711535-30711627)
chr2 (86-224)||(18053394-18053534)
chr2 (57-224)||(18667125-18667290)
chr2 (66-178)||(40675211-40675323)
chr2 (46-111)||(34064242-34064307)
chr2 (83-174)||(3409848-3409939)
chr2 (169-227)||(1093911-1093969)
chr2 (88-180)||(29804307-29804399)
chr2 (88-224)||(41648743-41648879)
chr2 (156-206)||(33475654-33475704)
chr2 (123-224)||(35380354-35380455)
[»] chr5 (35 HSPs)
chr5 (46-224)||(32157347-32157525)
chr5 (46-215)||(18879629-18879798)
chr5 (52-224)||(27905480-27905652)
chr5 (49-224)||(43385798-43385974)
chr5 (46-224)||(22921438-22921609)
chr5 (64-226)||(34720043-34720205)
chr5 (25-182)||(15931979-15932136)
chr5 (104-224)||(3805393-3805513)
chr5 (64-224)||(27450970-27451130)
chr5 (64-226)||(34724019-34724181)
chr5 (46-224)||(29322063-29322229)
chr5 (57-227)||(5385062-5385232)
chr5 (46-215)||(1224573-1224742)
chr5 (64-225)||(26297904-26298065)
chr5 (64-224)||(26299446-26299606)
chr5 (64-206)||(39408737-39408879)
chr5 (83-218)||(1840976-1841111)
chr5 (52-225)||(38523225-38523391)
chr5 (57-224)||(26217423-26217590)
chr5 (64-227)||(34856943-34857102)
chr5 (57-225)||(19283558-19283725)
chr5 (57-224)||(11136636-11136803)
chr5 (57-191)||(4983938-4984072)
chr5 (64-206)||(39406999-39407141)
chr5 (84-226)||(10493377-10493514)
chr5 (75-200)||(19715797-19715921)
chr5 (67-224)||(20188350-20188507)
chr5 (136-224)||(14501398-14501486)
chr5 (52-178)||(31620007-31620134)
chr5 (48-218)||(2675308-2675476)
chr5 (73-206)||(27195441-27195574)
chr5 (57-170)||(41782748-41782861)
chr5 (48-138)||(20191198-20191288)
chr5 (57-178)||(28430595-28430717)
chr5 (57-144)||(13937226-13937313)
[»] scaffold0316 (1 HSPs)
scaffold0316 (46-227)||(18707-18888)
[»] chr6 (21 HSPs)
chr6 (49-229)||(7957049-7957229)
chr6 (54-218)||(18961851-18962015)
chr6 (46-216)||(10346220-10346390)
chr6 (63-224)||(472826-472987)
chr6 (57-178)||(25181138-25181259)
chr6 (48-218)||(10962386-10962556)
chr6 (46-225)||(7436699-7436877)
chr6 (83-206)||(13311366-13311489)
chr6 (87-211)||(33109845-33109969)
chr6 (76-178)||(12428089-12428191)
chr6 (57-183)||(22295397-22295523)
chr6 (46-218)||(3082293-3082465)
chr6 (57-220)||(17493306-17493468)
chr6 (50-112)||(6998659-6998721)
chr6 (130-218)||(6998582-6998670)
chr6 (52-140)||(27925474-27925562)
chr6 (52-174)||(9463664-9463785)
chr6 (146-218)||(4442057-4442129)
chr6 (34-135)||(6194845-6194945)
chr6 (48-211)||(5641176-5641339)
chr6 (54-183)||(8291385-8291514)
[»] chr8 (19 HSPs)
chr8 (72-224)||(11161078-11161230)
chr8 (46-198)||(22563284-22563436)
chr8 (92-218)||(22930858-22930978)
chr8 (48-220)||(33280604-33280774)
chr8 (57-206)||(43966900-43967049)
chr8 (86-200)||(12377745-12377859)
chr8 (83-224)||(9413263-9413404)
chr8 (83-227)||(39477420-39477558)
chr8 (52-183)||(23180790-23180921)
chr8 (67-140)||(1091164-1091236)
chr8 (96-225)||(34515554-34515683)
chr8 (54-178)||(15211875-15211999)
chr8 (57-227)||(25731827-25731992)
chr8 (160-225)||(27189629-27189694)
chr8 (68-132)||(10750256-10750320)
chr8 (130-174)||(17865720-17865764)
chr8 (147-224)||(32740279-32740356)
chr8 (92-178)||(9133438-9133525)
chr8 (79-183)||(32554088-32554192)
[»] scaffold0658 (1 HSPs)
scaffold0658 (46-224)||(6366-6533)
[»] scaffold0043 (1 HSPs)
scaffold0043 (57-224)||(16492-16658)
[»] scaffold0106 (1 HSPs)
scaffold0106 (117-218)||(26499-26600)
[»] scaffold0444 (1 HSPs)
scaffold0444 (57-178)||(1386-1507)
[»] scaffold0135 (1 HSPs)
scaffold0135 (149-215)||(33493-33559)
[»] scaffold0025 (1 HSPs)
scaffold0025 (86-154)||(4748-4816)


Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 25 - 224
Target Start/End: Original strand, 4275483 - 4275682
Alignment:
Q  25 acttttgagtaatgtgactcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatag 124  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  4275483 acttttgagtaatgtgactcaagcaaacgaactgaacccaacgagccaaaccgaactattcgtgaactttaaacgagtcgaacccaagctgaaaaaatag 4275582  T
Q  125 ttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||    
T  4275583 tttgtgtcgaactcgagccgagtttcgagctgaaccaattcttatcgagtcgagtcgagctcaggcagattcgactcgactcggctcatttccaacccta 4275682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 50605633 - 50605455
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||     
T  50605633 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacaagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 50605534  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||| ||||  | |||||||||||||||| ||||||    
T  50605533 gtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccgacccta 50605455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 46 - 225
Target Start/End: Complemental strand, 53369240 - 53369061
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  53369240 agcaaccgaactgaacctaacgagccgaaccgaacagttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 53369141  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    ||||||||| ||||||||||||||||||| ||| |||  |||| ||||||||  | ||||||||||||||||||||||||    
T  53369140 gtttcgagccgaaccaattcttatcgagttgagccgaactcaggcagattcggttcgactcgactcatttccaaccctag 53369061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 19850310 - 19850132
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  19850310 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 19850211  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| ||||||||  ||||||||||||| |||| |||||||| ||||  | ||||||||||||||||| |||||    
T  19850210 gtttcgagccgaaccaatgtttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccagcccta 19850132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 48977182 - 48977004
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| ||||||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  48977182 agcaaccgaactgaacctaacgagccgaaccaaattgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 48977083  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| ||||||||||||||||| ||||| |||| |||| ||||||||  | ||||||||||||||||| |||||    
T  48977082 gtttcgagccgaaccaattcttatcgaatcgagccgagttcaggcagattcggttcgactcgactcatttccagcccta 48977004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 9469599 - 9469428
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcg 151  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9469599 cgaactgaacctaacgagccgaatcgaactgttcgtgaactttaaacgatccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcg 9469500  T
Q  152 agctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||| ||||||||||||||||||||||| |||| |||||||| ||||| | ||||||||||||||||| |||||    
T  9469499 agccgaaccaattcttatcgagtcgagccgagctcagacaggttcga-tcgactcgactcatttccagcccta 9469428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 49820556 - 49820384
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||     
T  49820556 agcaaccgaactgaacctaacgagccgaactgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagtcga 49820457  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||||||||| ||||||||||||||||||||||| |||| |||| ||| ||||| | ||||||| |||||||||    
T  49820456 gtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcaggttcgattcgactcgattcatttcca 49820384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 46 - 225
Target Start/End: Complemental strand, 21436485 - 21436306
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||     
T  21436485 agcaaccgaactgaacctaacgagccaaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtccgtgtcgaattcgagccga 21436386  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    ||||||||| ||| ||||||||||||||||||| |||  |||||||| ||||  | ||||||||||||||||||||||||    
T  21436385 gtttcgagccgaatcaattcttatcgagtcgagccgaactcagacaggttcggttcgactcgactcatttccaaccctag 21436306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 43386701 - 43386534
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| || ||||| ||| |    
T  43386701 tgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagtcgaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagtttcaagccg 43386602  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    | | ||||||||||||||||||||||| |||||||| |||   | ||||||||||||||||| |||||    
T  43386601 agcaaattcttatcgagtcgagtcgagctcagacaggttcagttcgactcgactcatttccagcccta 43386534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 57 - 205
Target Start/End: Original strand, 51409087 - 51409235
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||| ||||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  || ||||||||| |    
T  51409087 tgaacctaacgagccgagccgaactgtacgtgaactttaaacgagtcgaactcgagctaaaaaaatagttcgtgtcgaactcgaatcgagtttcgagccg 51409186  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgact 205  Q
    ||| ||||||||||||||||||||||| |||||||  ||||||| ||||    
T  51409187 aacaaattcttatcgagtcgagtcgagctcagacaagttcgactcgact 51409235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 222
Target Start/End: Complemental strand, 45674470 - 45674306
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||      
T  45674470 agcaaccgaactgaacctaacgagccgaaccgaactattcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcaagcc-- 45674373  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccc 222  Q
              ||||||||||||||||||||||| |||| |||| ||| ||||  | |||||||||||||||||||||    
T  45674372 ----------gaaccaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccaaccc 45674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 46 - 225
Target Start/End: Original strand, 44792755 - 44792922
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||      
T  44792755 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagcc-- 44792852  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
              ||||||||||||||||||||||| |||| ||| |||| ||||  | ||||||||||||||||| ||||||    
T  44792853 ----------gaaccaattcttatcgagtcgagccgagctcatacaggttcggttcgactcgactcatttccagccctag 44792922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 36543472 - 36543365
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||     
T  36543472 agcaaacgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtttgtgtcgaactcgagccga 36543373  T
Q  146 gtttcgag 153  Q
    ||||||||    
T  36543372 gtttcgag 36543365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 96 - 224
Target Start/End: Complemental strand, 25134061 - 25133933
Alignment:
Q  96 aacgagtcgaactcgagct-gaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagat 194  Q
    |||||| |||||| ||||| |||||||| |||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  25134061 aacgagccgaacttgagctagaaaaaat-gttcgtttcgaactcgaaccgggtttcgagccgaaccaattcttatcgagtcgagtcgagctcagacagat 25133963  T
Q  195 tcgacttgactcgactcatttccaacccta 224  Q
    |||||| ||||||||||||||||| |||||    
T  25133962 tcgactcgactcgactcatttccagcccta 25133933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 55892665 - 55892814
Alignment:
Q  71 cgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatc 170  Q
    ||||||||||| | |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||       |||||| || | ||||||||||    
T  55892665 cgaaccgaactgtacgtgtactttaaacgagtcgaactcgagctaaaaaaatagttcgtgtcgaactcgag-------tcgagccgagcaaattcttatc 55892757  T
Q  171 gagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    ||||||||||||| ||||| |||||||| | ||||||||||||||||| ||||||||    
T  55892758 gagtcgagtcgagctcagatagattcgattcgactcgactcatttccagccctagtt 55892814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 227
Target Start/End: Complemental strand, 22183937 - 22183760
Alignment:
Q  50 aacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggttt 149  Q
    |||||| |||| ||||||||| |||||||||| |||||||| |||||||||||| || |||||||||||||| ||||||||||||||||||| || ||||    
T  22183937 aacgaattgaacctaacgagcggaaccgaactgttcgtgaactttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 22183838  T
Q  150 cgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
     |||| || | |||||||||| ||||||  |||| |||||||| ||||  | ||||||| ||||||| | ||||||||    
T  22183837 tgagccgagcaaattcttatcaagtcgatccgagctcagacaggttcggttcgactcgattcatttctagccctagtt 22183760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 28266717 - 28266838
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||| |    
T  28266717 tgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagtcgaactcgagctaaaaaaagagttcgtgtcgaactcgagtcgagtttcgagccg 28266816  T
Q  157 aaccaattcttatcgagtcgag 178  Q
    | | |||||||||| |||||||    
T  28266817 agcaaattcttatccagtcgag 28266838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 24009418 - 24009551
Alignment:
Q  72 gaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcg 171  Q
    |||||||||| |||||||| ||||||||||  ||||||||||| ||||||  |||||| | ||||||||| ||||||||||| |||||||||||||||||    
T  24009418 gaaccgaactgttcgtgaactttaaacgagcagaactcgagctaaaaaaaaggttcgttttgaactcgagtcgggtttcgagttgaaccaattcttatcg 24009517  T
Q  172 agtcgagtcgagatcagacagattcgacttgact 205  Q
    | ||| |||||| ||||| |||||||||| ||||    
T  24009518 aatcgtgtcgagctcagatagattcgactcgact 24009551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 40797295 - 40797154
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    |||||||| |||||||||  |||||||||| |  ||||   ||||||   |||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  40797295 ttcgtgaactttaaacgacccgaactcgagttagaaaagaggttcgttgtgaactcgagccatgtttcgagccgaaccaattcttatcgagtcgagtcga 40797196  T
Q  183 gatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    | |||||||||||||||| ||||||||||||||||| |||||    
T  40797195 gctcagacagattcgactcgactcgactcatttccaccccta 40797154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 51994219 - 51994082
Alignment:
Q  88 gaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatca 187  Q
    |||| ||||||||| |||  | ||||| |||||| ||||||  ||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||    
T  51994219 gaatattaaacgagccgagtttgagcttaaaaaaaagttcggttcgaactcgagtcgagtttcgagctgaaccaattcttaacgagtcgagtcgagctca 51994120  T
Q  188 gacagattcgacttgactcgactcatttccaaccctag 225  Q
    ||| ||||||| | ||||||||||||||||| ||||||    
T  51994119 gacggattcgattcgactcgactcatttccagccctag 51994082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 179
Target Start/End: Complemental strand, 52813173 - 52813044
Alignment:
Q  50 aacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggttt 149  Q
    |||||| |||| | |||||| ||||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||| || ||||    
T  52813173 aacgaattgaaccgaacgagtcgaaccgaactgttcgtgaactttaaacgaggcgaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 52813074  T
Q  150 cgagctgaaccaattcttatcgagtcgagt 179  Q
    | ||| || | |||||||||||||||||||    
T  52813073 caagccgagcaaattcttatcgagtcgagt 52813044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 230
Target Start/End: Original strand, 36156874 - 36157057
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||||||||| |||| |||||||| ||||||||||||||||| |||||||||||| |||||||||| |||| || ||  |     
T  36156874 caaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagtcgaacttgagctgaaaaaaaagttcgtgtcaaacttgaaccaagg 36156973  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcaga-cagattcgacttgactcgactcatttccaaccctagtttca 230  Q
     |||| | || ||||||||||  ||||||| ||||| |||||   ||||||| || ||||||||||||||||||||||| ||||    
T  36156974 ctcgaaccgagccaattcttaatgagtcgaatcgagctcagattggattcgatttaactcgactcatttccaaccctagattca 36157057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 52705760 - 52705593
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  |||| || |||||||||| |||||||||||  ||||||  |||| | |  |||||||  || ||||||||| |    
T  52705760 tgaacctaacgagccgaaccgagttgctcgtaaactttaaacgagccgaactcgagcccaaaaaaaggttcattttaaactcgaatcgagtttcgagccg 52705661  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||||||||||||| |||| |||||||  ||||||| ||||||||||||||||| |||||    
T  52705660 aaccaattcttatcgagtcgagccgagctcagacaagttcgactcgactcgactcatttccagcccta 52705593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 206
Target Start/End: Original strand, 46945153 - 46945297
Alignment:
Q  62 ctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaacca 161  Q
    |||||||||||||||||  | |||   ||||||||||||| |||| ||||| | ||||||  ||| || || |||||||| || ||||||||| ||||||    
T  46945153 ctaacgagccgaaccgagttgttcacaaattttaaacgagccgaattcgagttaaaaaaaaggtttgtttcaaactcgagtcgagtttcgagccgaacca 46945252  T
Q  162 attcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    ||||||||||||| |||||||| |||||||| ||||||| |||||    
T  46945253 attcttatcgagttgagtcgagctcagacaggttcgactcgactc 46945297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 12790125 - 12790218
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccg 144  Q
    ||||| ||||||||| |||||||||||||| |     |||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  12790125 agcaaccgaactgaacctaacgagccgaactg-----ttcgtgaactttaaacgagccgaactcgagttgaaaaaatagttcgtgtcgaactcgagccg 12790218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 50240893 - 50241034
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    ||||| |||||||| |||| ||||| |||||| ||||||  ||| || |||||||||||  | ||||||||||||||||||| ||| |||||||||||||    
T  50240893 ttcgttaattttaagcgagccgaacacgagctaaaaaaaaggtttgtttcgaactcgagtagagtttcgagctgaaccaatttttaacgagtcgagtcga 50240992  T
Q  183 gatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    | |||||    ||||| |||||||| |||||||||| |||||    
T  50240993 gctcagatgcgttcgatttgactcggctcatttccagcccta 50241034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 79894 - 79760
Alignment:
Q  89 aattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcag 188  Q
    |||||| | ||||||||| |||||||||||||| ||||||||||||||||||| || ||||||| | || | || ||||||||||||||| |||  | ||    
T  79894 aatttttatcgagtcgaa-tcgagctgaaaaaagagttcgtgtcgaactcgagtcgagtttcgaaccgagcaaaatcttatcgagtcgagccgaacttag 79796  T
Q  189 acagattcgacttgactcgactcatttccaacccta 224  Q
    |||| ||||| | || |||||||||||||| |||||    
T  79795 acaggttcgattcgattcgactcatttccagcccta 79760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 12673640 - 12673808
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatag-ttcgtgtcgaactcgagccgggtttcgagct 155  Q
    |||| |||||||| ||||||||  | |||| ||| |||||||||| |||| | ||| | ||| || || ||||| || |||||||| || |||||||||     
T  12673640 tgaacctaacgagtcgaaccgagttgttcgcgaactttaaacgagccgaaattgagttaaaataaaaggttcgtttcaaactcgagtcgagtttcgagcc 12673739  T
Q  156 gaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||| | ||||||  |||| |||||||| |||||||| ||||||| |||||||||||||| ||||||||    
T  12673740 gaactatttcttaaagagttgagtcgagctcagacaggttcgactcgactcgactcattttcaacccta 12673808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 7505513 - 7505430
Alignment:
Q  135 actcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||||||| || ||||||||| ||| ||||||||||||||||||| |||| |||||||  ||||||| |||||||||||||||||    
T  7505513 actcgagtcgagtttcgagccgaatcaattcttatcgagtcgagccgagctcagacaagttcgactcgactcgactcatttcca 7505430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 1803327 - 1803185
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| |||||||||| || ||||| |||||||||  |||||||||||| ||||||  |||||  ||||||||||| |  ||||||| | ||||||||    
T  1803327 aacgagctgaaccgaactcttagtgaactttaaacgaaccgaactcgagcttaaaaaaaggttcgcttcgaactcgagtcaagtttcgaaccgaaccaat 1803228  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    | ||||||| |||| ||||  |||||||| ||| ||| |||||    
T  1803227 ttttatcgaatcgaatcgaactcagacaggttcaactcgactc 1803185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 206
Target Start/End: Original strand, 32398343 - 32398500
Alignment:
Q  50 aacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctg-aaaaaatagttcgtgtcgaactcgagccgggtt 148  Q
    |||||| |||| |||| || ||||||| |||| |||||||| | |||||||| |||||| |||||| |||||| | ||| |||| ||||||| ||| | |    
T  32398343 aacgaaatgaacctaatgaaccgaaccaaactgttcgtgaactctaaacgagccgaacttgagctgaaaaaaaaaattcatgtcaaactcgaaccgaggt 32398442  T
Q  149 tcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    |||| | || |||||| ||| |||||||||||||| |||||||  ||||||| |||||    
T  32398443 tcgaacggagccaatttttaacgagtcgagtcgagctcagacaagttcgactcgactc 32398500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 44377772 - 44377651
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| ||||||||||||||| |  | |||||||| |||||||||| ||||||| || |  | |||  |||||| || |||||||| || ||||||||| |    
T  44377772 tgaacctaacgagccgaaccaagttgttcgtgaactttaaacgagccgaactcaagttagagaaaaggttcgtttcaaactcgagtcgagtttcgagccg 44377673  T
Q  157 aaccaattcttatcgagtcgag 178  Q
    ||||||||||||||||||||||    
T  44377672 aaccaattcttatcgagtcgag 44377651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 18990336 - 18990192
Alignment:
Q  80 ctattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagt 179  Q
    ||||||||||| |||||||||| |||||| ||| | |||||| |||||||||| ||||| | ||| | ||| |  ||||||||||| |  ||||||||||    
T  18990336 ctattcgtgaactttaaacgagccgaacttgagttaaaaaaaaagttcgtgtcaaactcaaaccgagattcaaattgaaccaattcctgacgagtcgagt 18990237  T
Q  180 cgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||  ||| |||| |||||  ||| |||||||||||||| |||||    
T  18990236 cgaactcaaacaggttcgatctgattcgactcatttccagcccta 18990192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 11055819 - 11055965
Alignment:
Q  65 acgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaatt 164  Q
    ||||||||||||||  | |||||||| |||||| |||  |||||||||   | ||||| |||||| |||||||||||     |||||||| ||  |||||    
T  11055819 acgagccgaaccgagttgttcgtgaactttaaatgagctgaactcgagtcaagaaaatggttcgtatcgaactcgag-----tttcgagccgagtcaatt 11055913  T
Q  165 cttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttc 216  Q
    |||| |||||||||||||  |||||  ||||||||| |||||||||||||||    
T  11055914 cttaccgagtcgagtcgaactcagatggattcgactcgactcgactcatttc 11055965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 9222840 - 9222906
Alignment:
Q  149 tcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcattt 215  Q
    |||||| |||||||||||||| |||| |||||||| |||||||| ||||| ||||||||||||||||    
T  9222840 tcgagccgaaccaattcttattgagttgagtcgagctcagacagtttcgatttgactcgactcattt 9222906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 227
Target Start/End: Complemental strand, 54742261 - 54742080
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaa--aaaatagttcgtgtcgaactcgagccgg 145  Q
    |||||||| |||| || | ||| |||||| |||| |||||||| |||||||||  |||||||||||||||  |||| | |||||||  |||||||   |     
T  54742261 caaacgaattgaacctgatgagtcgaaccaaactgttcgtgaactttaaacgaaccgaactcgagctgaaaaaaaaaaattcgtgttaaactcgaattga 54742162  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    | ||||  | || |||||||||| |||||| ||||||| |||||||| || || | || ||||||||||||||||| |||||    
T  54742161 ggttcggaccgagccaattcttaacgagtcaagtcgagctcagacaggtttgattcgaatcgactcatttccaaccttagtt 54742080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 178
Target Start/End: Original strand, 16743080 - 16743213
Alignment:
Q  45 aagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccg 144  Q
    ||||||||||  |||| ||| ||| |||| ||||  | |||||||| ||||| | |||||||||| || | ||||||| ||||||  | |||| ||| ||    
T  16743080 aagcaaacgagttgaacctaccgaaccgagccgagttgttcgtgaactttaatcaagtcgaactcaagttaaaaaaatggttcgtaacaaacttgagtcg 16743179  T
Q  145 ggtttcgagctgaaccaattcttatcgagtcgag 178  Q
     ||||||||| |||||||||||||||||||||||    
T  16743180 agtttcgagccgaaccaattcttatcgagtcgag 16743213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 50711443 - 50711535
Alignment:
Q  86 gtgaattttaaacgagtcgaactcgagct-gaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgag 178  Q
    ||||| |||||||||| |||||||||||| ||||||| | ||||| | |||||||| ||| |||| |||| |||||||||||||||||||||||    
T  50711443 gtgaactttaaacgagccgaactcgagctagaaaaaaga-ttcgttttgaactcgaaccgagttttgagccgaaccaattcttatcgagtcgag 50711535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 140
Target Start/End: Original strand, 48340210 - 48340303
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagct-gaaaaaatagttcgtgtcgaactcga 140  Q
    |||||||| ||||||||| ||| |||||| |||| || ||||| |||||||||||||||||  ||||  |||||| |||||||||| |||||||    
T  48340210 caaacgaattgaatctaatgagtcgaaccaaactgtttgtgaactttaaacgagtcgaacttaagctcaaaaaaaaagttcgtgtcaaactcga 48340303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 48732022 - 48732097
Alignment:
Q  150 cgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    |||||||||||||||| |||||||||||| |||| ||| ||   ||| ||| ||||||||||||||||| ||||||    
T  48732022 cgagctgaaccaattcatatcgagtcgagccgagctcacacgagttcaactcgactcgactcatttccagccctag 48732097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 6874934 - 6874988
Alignment:
Q  67 gagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaa 121  Q
    |||||||||| |||| || ||||| ||||| ||||||||||||||||||||||||    
T  6874934 gagccgaaccaaactgtttgtgaactttaagcgagtcgaactcgagctgaaaaaa 6874988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 224
Target Start/End: Original strand, 5769715 - 5769896
Alignment:
Q  43 tcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 142  Q
    |||||| ||| ||| ||| |||||||| ||||| ||  | ||| |||| ||| || ||||||||||  |||  |||||||||||||| ||||| |||||     
T  5769715 tcaagctaactaaccgaagctaacgagtcgaactgagttgttcatgaacttttaatgagtcgaacttaagccaaaaaaatagttcgtatcgaattcgagt 5769814  T
Q  143 cgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    || ||||||||| |||| | ||||||  |||| |||||||| | |||||  ||||||  || ||||  |||||||| |||||    
T  5769815 cgagtttcgagccgaactatttcttaaagagttgagtcgagcttagacaagttcgacacgattcgatacatttccagcccta 5769896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 48731976 - 48732025
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgag 101  Q
    ||||||||| ||||| |||||||||||||| ||||||||| |||||||||    
T  48731976 cgaactgaacctaacaagccgaaccgaactgttcgtgaatcttaaacgag 48732025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 22720822 - 22720750
Alignment:
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||||||||| ||||||||||||||||||| ||| |||| ||||||   ||||| | ||||||| |||||||||    
T  22720822 gtttcgagccgaaccaattcttatcgagttgagccgagctcagactagttcgattcgactcgattcatttcca 22720750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 49084565 - 49084612
Alignment:
Q  27 ttttgagtaatgtgactcaagcaaacgaactgaatctaacgagccgaa 74  Q
    |||||||| |||||| |||| |||||||| ||||||||||||||||||    
T  49084565 ttttgagttatgtgattcaaccaaacgaattgaatctaacgagccgaa 49084612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 224
Target Start/End: Original strand, 5765171 - 5765351
Alignment:
Q  43 tcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 142  Q
    |||||| ||| ||| ||| |||||||| ||||| ||  | ||| |||| ||| || ||||||||||  |||  |||||||||||| | ||||| |||||     
T  5765171 tcaagctaactaaccgaacctaacgagtcgaactgagttgttcatgaacttttaatgagtcgaacttaagcc-aaaaaatagttcatatcgaattcgagt 5765269  T
Q  143 cgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    || ||||||||| |||| | ||||||  |||| |||||||| |||||||  ||||||  || ||||  |||||||| |||||    
T  5765270 cgagtttcgagccgaactatttcttaaagagttgagtcgagctcagacaagttcgacacgattcgatacatttccagcccta 5765351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 224
Target Start/End: Original strand, 5767415 - 5767595
Alignment:
Q  43 tcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 142  Q
    |||||| ||| ||| ||| |||||||| ||||| ||  | ||| |||| ||| || ||||||||||  |||  |||||||||||| | ||||| |||||     
T  5767415 tcaagctaactaaccgaacctaacgagtcgaactgagttgttcatgaacttttaatgagtcgaacttaagcc-aaaaaatagttcatatcgaattcgagt 5767513  T
Q  143 cgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    || ||||||||| |||| | ||||||  |||| |||||||| |||||||  ||||||  || ||||  |||||||| |||||    
T  5767514 cgagtttcgagccgaactatttcttaaagagttgagtcgagctcagacaagttcgacacgattcgatacatttccagcccta 5767595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 12790221 - 12790286
Alignment:
Q  159 ccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||||| ||||| |||| |||||||| ||||  | |||||||||||||| || |||||    
T  12790221 ccaattcttatcgaatcgagccgagctcagacaggttcggttcgactcgactcattttcagcccta 12790286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 45654308 - 45654513
Alignment:
Q  24 gacttttgagtaatgtgactcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaata 123  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| | || |||||||||||||||| |||||||||||||||    
T  45654308 gacttttgagtaatgtga-tcaagcaaacaaactgaacctaacgagccgaaccgaactattcataaactttaaacgagtcgaacccgagctgaaaaaata 45654406  T
Q  124 gttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccct 223  Q
     ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||    
T  45654407 attcgtgtcgaactcgagccgaatttcaagctgaaccaattcttatcgagtcgagtcgagctcaggcaggttcgactcgactcgactcatttccaaccct 45654506  T
Q  224 agtttca 230  Q
    |||||||    
T  45654507 agtttca 45654513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 24 - 224
Target Start/End: Original strand, 21681562 - 21681762
Alignment:
Q  24 gacttttgagtaatgtgactcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaata 123  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  21681562 gacttttgagtaatgtaactcaagcaaacgagctgaacctaacgagccgaaccgaactattcatgaattttaaacgagttgaacccgagctgaaaaaata 21681661  T
Q  124 gttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccct 223  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||| ||| ||||||| |||||| |||||||||||||||    
T  21681662 gttcgtgtcgaactcgagccgagttttaagctgaaccaattcttatcgagtcgagttgagctcaggcaggttcgactcgactcggctcatttccaaccct 21681761  T
Q  224 a 224  Q
    |    
T  21681762 a 21681762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 36418698 - 36418516
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||||||     
T  36418698 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgaaccgaactcgagctgaaaaaataattcgtgtcgaactcgagccga 36418599  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagttt 228  Q
    ||||||||| ||||||||||||||||||||||| |||| |||| ||||||||| | ||||||||||||||||| || ||||||    
T  36418598 gtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcagattcgattcgactcgactcatttccagccttagttt 36418516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 32179494 - 32179333
Alignment:
Q  63 taacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaa 162  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||    
T  32179494 taacgagccgaaccgaactgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcgtgtcaaactcaagccgagtttcgagccgaaccaa 32179395  T
Q  163 ttcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||| ||||| |||| |||| ||  ||||  | ||||||||||||||||| |||||    
T  32179394 ttcttatcgaatcgagccgagctcaggcaagttcggttcgactcgactcatttccagcccta 32179333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 37441791 - 37441912
Alignment:
Q  62 ctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaacca 161  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  37441791 ctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccgaacca 37441890  T
Q  162 attcttatcgagtcgagtcgag 183  Q
    ||||||||||||||||| ||||    
T  37441891 attcttatcgagtcgagccgag 37441912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 45582063 - 45582239
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||| ||||||||  |||||||| |||  |||||||||| ||| |||||||||  ||||||||||||||||||| ||| |||||||||||| | ||| ||    
T  45582063 caaatgaactgaacttaacgagctgaattgaactattcgcgaactttaaacgaaccgaactcgagctgaaaaaaaagtccgtgtcgaactcaaaccgagt 45582162  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||| ||| ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||    
T  45582163 ttcgagctgaactaatccttatcgagtcgagtcgagctcatacagattcgactcgactcgactcatttccagcccta 45582239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 7955790 - 7955646
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagct-gaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcg 181  Q
    |||||||| |||||||||| |||||||||||| ||||||| | ||||| |||||||||| ||| ||||||||| |||||||||||||| |||||||||||    
T  7955790 ttcgtgaactttaaacgagccgaactcgagctagaaaaaaga-ttcgtttcgaactcgaaccgagtttcgagccgaaccaattcttattgagtcgagtcg 7955692  T
Q  182 agatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    || |||||||||||||||| ||||||||||||||||||||||||||    
T  7955691 agctcagacagattcgactcgactcgactcatttccaaccctagtt 7955646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 226
Target Start/End: Complemental strand, 24575467 - 24575298
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  | |||||||| |||||||||| |||||||||| | |||||| ||||||| || |||||||| || ||||||||| |    
T  24575467 tgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagccgaactcgagttaaaaaaaaagttcgtttcaaactcgagtcgagtttcgagccg 24575368  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    |||||||||||||||| || | ||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  24575367 aaccaattcttatcgattcaaatcgagctcagacaggttcgactcgactcgactcatttccaaccctagt 24575298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 15257819 - 15257968
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| ||||||||    |||||||| |||||||||| ||||||||||||  |||||| |||||| |||||||||| ||| ||||||||| |    
T  15257819 tgaacctaacgagtcgaaccgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaatggttcgtttcgaactcgaaccgagtttcgagccg 15257918  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  15257919 aaccaattcttatcgagtcgagttgagctcagacagattcgactcgactc 15257968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 24470488 - 24470654
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||      
T  24470488 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtatcgaactcgagcc-- 24470585  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
              ||||||||||||||||||| ||| |||| |||| ||| ||||  | ||||||||||||||||| |||||    
T  24470586 ----------gaaccaattcttatcgagttgagccgagctcaggcaggttcggttcgactcgactcatttccagcccta 24470654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 227
Target Start/End: Original strand, 29678082 - 29678247
Alignment:
Q  62 ctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaacca 161  Q
    |||||||||||||| ||  |  ||||||| |||||||||| |||||||||| ||||||||  |||||| ||||||| ||| || ||||||||| ||||||    
T  29678082 ctaacgagccgaacagagttgctcgtgaactttaaacgagccgaactcgagatgaaaaaaaggttcgtttcgaacttgagtcgagtttcgagccgaacca 29678181  T
Q  162 attcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
     |||||||||||||||||| || |||||||| ||||| | ||||||||||||||||| ||||||||    
T  29678182 tttcttatcgagtcgagtcaagctcagacaggttcgattcgactcgactcatttccagccctagtt 29678247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 5205082 - 5205252
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatag-ttcgtgtcgaactcgagccgggtttcgagct 155  Q
    |||| |||||||||||||||||  | |||| ||| |||||| |||||||||| ||| | |||||| || ||||| || |||||||| || |||||||||     
T  5205082 tgaacctaacgagccgaaccgagttgttcgcgaactttaaatgagtcgaacttgaggtaaaaaaaaaggttcgtttcaaactcgagtcgagtttcgagcc 5205181  T
Q  156 gaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    |||||||||||||| ||||||| ||||| |||||||| ||||||| ||||||||||||||||| |||||||    
T  5205182 gaaccaattcttatggagtcgaatcgagctcagacaggttcgactcgactcgactcatttccagccctagt 5205252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 14578995 - 14579171
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| ||| |||||| |||| ||||||||||||||||||| |||||| || || |||||| |||||||||| ||||||| ||| |     
T  14578995 caaacgaattgaacctaatgagtcgaaccaaactgttcgtgaattttaaacgagccgaacttgaactcaaaaaaaagttcgtgtcaaactcgaaccgagg 14579094  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    || || |  | |||||||||| |||||||||||||| ||| |||| ||||| | ||||||||||||||||| |||||    
T  14579095 tttgaacaaagccaattcttaacgagtcgagtcgagctcatacaggttcgattcgactcgactcatttccagcccta 14579171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 35309182 - 35309009
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||| || |||||| ||| |||||||||||||||||||    |||||| |||||||| |||     
T  35309182 agcaaccgaactgaacctaacgagccgaacggaactgttcgtaaactttaaatgagccgaactcgagctgaaaaaa----tcgtgtggaactcgaaccga 35309087  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccct 223  Q
    ||||||||| ||||||||||||||||||||||  |||| ||||  || ||||  | ||||| ||||||||||| ||||    
T  35309086 gtttcgagccgaaccaattcttatcgagtcgaaccgagctcaggtaggttcggttcgactcaactcatttccagccct 35309009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 14770827 - 14771003
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| ||||||||||||||| |||| ||  |||| |||||||||| |||||||| |||||||||| |||||||||| | ||||| ||| |     
T  14770827 caaacgaaatgaacctaacgagccgaaccaaactgtttctgaactttaaacgagccgaactcgggctgaaaaaaaagttcgtgtcaagctcgaaccgagg 14770926  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||  | || |||||||||| |||||||||||||| ||| |||  ||||| | |||||| |||||||||| |||||    
T  14770927 ttcggaccgagccaattcttaacgagtcgagtcgagttcaaacatgttcgattcgactcggctcatttccagcccta 14771003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 38061637 - 38061760
Alignment:
Q  102 tcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgactt 201  Q
    ||||||||||||| ||||||  |||||  ||||||||||| ||  ||| |||| |||||||||||||||||||||| ||||| |||||||| |||||||     
T  38061637 tcgaactcgagcttaaaaaaaggttcgcttcgaactcgagtcgaattttgagccgaaccaattcttatcgagtcgaatcgagctcagacaggttcgactc 38061736  T
Q  202 gactcgactcatttccaaccctag 225  Q
    ||||||||||||||||| ||||||    
T  38061737 gactcgactcatttccagccctag 38061760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 39577782 - 39577641
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||||||| ||||||| ||  |  |||| |||| ||||||||||  |||||| |||||    
T  39577782 ttcgtgaactttaaacgagccgaacttgagctgaaaaaaaagttcgtgtcaaactcgaaccaaggctcgaactgagccaattcttaatgagtcgggtcga 39577683  T
Q  183 gatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    | ||||| |||||||| | ||||||||||||||||| |||||    
T  39577682 gctcagatagattcgattcgactcgactcatttccagcccta 39577641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 224
Target Start/End: Original strand, 48575739 - 48575876
Alignment:
Q  87 tgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatc 186  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||| ||||| ||| || ||||||||   ||  ||||||||||||||||||||||| ||    
T  48575739 tgaactttaaacgagttgaactcgagctgaaaaaagagttcgtgttgaacttgagtcgagtttcgagtcaaataaattcttatcgagtcgagtcgagctc 48575838  T
Q  187 agacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||  ||||| | || ||||||||||| ||||||||    
T  48575839 agacatgttcgattcgattcgactcattttcaacccta 48575876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 43090005 - 43090167
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  ||||||| |||||||||| |||||||||||  ||||||  |||||| | ||||||||| || ||||||||| |    
T  43090005 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaatgttcgttttgaactcgagtcgagtttcgagccg 43090104  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||     |||||| |||| |||||||  ||||||| ||||||||||||||||| |||||    
T  43090105 aaccaattctt-----gtcgagccgagctcagacaagttcgactcgactcgactcatttccagcccta 43090167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 23916306 - 23916137
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| ||||||||| || ||||||| |||| |||||| | |||||||||| |||||| |||||| ||||| ||||| |||| ||||||| ||| |     
T  23916306 caaacgaattgaatctaatgaaccgaaccaaactgttcgtggactttaaacgagccgaacttgagctggaaaaa-agttcttgtcaaactcgaaccgaga 23916208  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||| | | || | |||||||| |||||||||||||| | |||||| ||||| | |||||||||||||||||    
T  23916207 ttcaaaccgagcaaattcttaacgagtcgagtcgagcttagacaggttcgattcgactcgactcatttcca 23916137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 7994912 - 7994764
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| |||| |||||||||||| || |||| |||||  ||||||| ||| ||||||  |||||| ||||||||||| || |||||||||||    
T  7994912 tgaacctaacgagtcgaatcgaactattcgtaaactttatacgagctgaactcgtgctaaaaaaag-gttcgtttcgaactcgagtcgagtttcgagctg 7994814  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    || ||||||||||||||| |||||||  ||| |||| ||||||| |||||    
T  7994813 aatcaattcttatcgagttgagtcgaactcaaacaggttcgactcgactc 7994764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 7595896 - 7595720
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||| ||| |||| |||| |||||||||| || | | |||||| |||||||||| |||||| |||||||||||| || ||||||| ||||||| ||| |     
T  7595896 caaatgaattgaacctaatgagccgaaccaaattgtccgtgaactttaaacgagccgaacttgagctgaaaaaaaagctcgtgtcaaactcgaaccgagg 7595797  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||| | || | |||||||| |||||||||| ||| |||||||||||||| | || | |||| ||||||| |||||    
T  7595796 ttcgaaccgagctaattcttaacgagtcgagttgagctcagacagattcgattcgatttgacttatttccagcccta 7595720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 28005827 - 28005735
Alignment:
Q  132 cgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||| ||| || ||||||||| |||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||| |||||    
T  28005827 cgaacttgagtcgagtttcgagccgaaccaattcttatcgagtcgagtcgagctcagagaggttcgactcgactcgactcatttccagcccta 28005735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 35810285 - 35810110
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||||||||| |||| |||||||| || ||||||| |||||| |||||| ||||| |||||||||  ||||| | ||| |     
T  35810285 caaacgaattgaacctaatgagccgaaccaaactgttcgtgaactt-aaacgagccgaacttgagctggaaaaaaagttcgtgttcaactcaaaccgagg 35810187  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||| | ||  ||||||||| |||||||||| ||| ||||| || ||||| | ||||||||||||||||| |||||    
T  35810186 ttcgaaccgagtcaattcttaacgagtcgagttgagctcagataggttcgattcgactcgactcatttccagcccta 35810110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 226
Target Start/End: Complemental strand, 40002457 - 40002318
Alignment:
Q  87 tgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatc 186  Q
    |||| ||||||||||||||||| |||||| ||||| |||||||||| |||| || ||| | ||||| | || |||||||||| |||||||||||||  |     
T  40002457 tgaactttaaacgagtcgaacttgagctggaaaaaaagttcgtgtcaaacttgaaccgaggttcgaaccgagccaattcttaacgagtcgagtcgaattt 40002358  T
Q  187 agacagattcgacttgactcgactcatttccaaccctagt 226  Q
    |||| | ||||| | ||||||||||||||||| |||||||    
T  40002357 agacgggttcgattcgactcgactcatttccagccctagt 40002318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 38061570 - 38061648
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 142  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||    
T  38061570 aacgagctgaaccgaactgttcgtgaattttaaacgagccgaactcgagcttaaaaaatggttcgtttcgaactcgagc 38061648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 13645716 - 13645815
Alignment:
Q  84 tcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgag 183  Q
    |||||||||||||| ||||||||||||||| | ||||| |||| || || |||||||| || ||||||||| ||||||||||| ||||||||||| ||||    
T  13645716 tcgtgaattttaaatgagtcgaactcgagccggaaaaaaagtttgtttcaaactcgagtcgagtttcgagccgaaccaattctaatcgagtcgagccgag 13645815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 31869049 - 31868894
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    |||||||||||||||  | |||||||| |||||||||| ||||| |||| | ||||||| ||| || ||||||||||| || ||||||||| ||  ||||    
T  31869049 aacgagccgaaccgagatgttcgtgaactttaaacgagccgaacccgagtttaaaaaatggtttgtatcgaactcgagtcgagtttcgagccgagtcaat 31868950  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||| |||||||| |||| |||||| || |    |||||||||||||||| ||||||||    
T  31868949 tcttattgagtcgagccgagctcagac-gagt----ttgactcgactcattttcaacccta 31868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 15662466 - 15662298
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| ||| |||||| |||| |||||||| |||||||||| |||||  |||||||||||| |||||||||| || |||| ||| |     
T  15662466 caaacgaattgaacctaatgagtcgaaccaaactgttcgtgaactttaaacgagccgaacatgagctgaaaaaaaagttcgtgtcaaattcgaaccgaga 15662367  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttc 216  Q
     ||||   || |||||||||| ||||| |||||||| ||| |||||||  | | ||||||| |||||||    
T  15662366 ctcgaatcgagccaattcttaacgagttgagtcgagctcaaacagatttaattcgactcgagtcatttc 15662298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 46265572 - 46265746
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||||||||| |||| |||||||| |||||||||| |||||| || || ||||||  | ||||||| |||||||  || |     
T  46265572 caaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaacttgaactaaaaaaa--gctcgtgtcaaactcgaatcgagg 46265669  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||| | |||| |||||||| |||||| ||| ||| | | |||| ||||| |  |||||||||||||||| |||||    
T  46265670 ttcgaaccgaactaattcttaacgagtcaagttgagcttaaacaggttcgattcaactcgactcatttccagcccta 46265746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 7840846 - 7840739
Alignment:
Q  117 aaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttc 216  Q
    ||||| ||||||  ||||||||||| ||  |||||||| ||||||||||||| ||||||||||| || ||||||  |||||| |  ||||||||||||||    
T  7840846 aaaaaaagttcggttcgaactcgagtcga-tttcgagccgaaccaattcttaacgagtcgagtcaagttcagacgaattcgattcaactcgactcatttc 7840748  T
Q  217 caaccctag 225  Q
    |||||||||    
T  7840747 caaccctag 7840739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 3577079 - 3576984
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgag 178  Q
    |||||||| |||||||||| |||||||||| | || |||  ||| || |||||||| |  || ||||||||||||||||||||||||| |||||||    
T  3577079 ttcgtgaactttaaacgagccgaactcgagttaaataaaatgtttgtatcgaactcaaatcgagtttcgagctgaaccaattcttatcaagtcgag 3576984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 200
Target Start/End: Complemental strand, 15306041 - 15305906
Alignment:
Q  65 acgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaatt 164  Q
    ||||| ||||||||  | |||||||| |||||||||| |||||| |||   | ||||| |||||| || |||||||| || |||| |||| ||  |||||    
T  15306041 acgagtcgaaccgagtttttcgtgaactttaaacgagccgaacttgagtcaagaaaatggttcgtatcaaactcgagtcgagttttgagccgagtcaatt 15305942  T
Q  165 cttatcgagtcgagtcgagatcagacagattcgact 200  Q
    ||||| ||||||||||||| |||||  |||||||||    
T  15305941 cttattgagtcgagtcgagctcagatggattcgact 15305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 36118353 - 36118271
Alignment:
Q  95 aaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgag 178  Q
    |||||||||||||||||||| ||||||| ||| || ||||||| |||  | |||| |||||||| |||||||||||||||||||    
T  36118353 aaacgagtcgaactcgagctaaaaaaat-gtttgtatcgaacttgagttgagttttgagctgaatcaattcttatcgagtcgag 36118271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 42936649 - 42936494
Alignment:
Q  72 gaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaata--gttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttat 169  Q
    ||||| |||| |||||||| |||||||||| ||||||||| || |||||| |  ||| ||| | ||||||| | | | |||||   || ||||||||||     
T  42936649 gaaccaaactgttcgtgaactttaaacgagccgaactcgaacttaaaaaaaaaagtttgtgacaaactcgaactgaggttcgaatcgagccaattcttaa 42936550  T
Q  170 cgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    |||||||||| ||  |||||||  ||||| | ||||||||||||||||| ||||||    
T  42936549 cgagtcgagttgaactcagacaagttcgattcgactcgactcatttccagccctag 42936494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 44595964 - 44595870
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgag 178  Q
    |||||||| |||||||||| ||||||  || | ||||||  |||||| |||||||| || || ||||||| | |||||||||||||||||||||||    
T  44595964 ttcgtgaactttaaacgagccgaacttaagtt-aaaaaagggttcgtatcgaactcaagtcgagtttcgaaccgaaccaattcttatcgagtcgag 44595870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 47603471 - 47603549
Alignment:
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| ||||||||||||||||||| ||| |||  |||| ||| ||||  | ||||||||||||||||| |||||    
T  47603471 gtttcgagccgaaccaattcttatcgagttgagccgaactcaggcaggttcggttcgactcgactcatttccagcccta 47603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 179
Target Start/End: Complemental strand, 672046 - 671893
Alignment:
Q  26 cttttgagtaatgtgactcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagt 125  Q
    ||||| ||| |||||| || | |||||||||| || |||| |||  |||||||||||||| | ||||||||| ||| | ||||||| ||| ||||| |||    
T  672046 cttttaagtgatgtgattcgaacaaacgaactaaacctaaagagttgaaccgaactattcataaattttaaatgagccaaactcgaactgcaaaaaaagt 671947  T
Q  126 tcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagt 179  Q
    | ||||  ||||| ||| |  | || || | ||| |||||||||||||||||||    
T  671946 ttgtgttaaactcaagctgaatgtcaagttaaacaaattcttatcgagtcgagt 671893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 47603411 - 47603470
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcga 105  Q
    ||||| |||||| || |||||||||||||||||||  || ||||| ||||||||||||||    
T  47603411 agcaaccgaactaaacctaacgagccgaaccgaacagtttgtgaactttaaacgagtcga 47603470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 50445575 - 50445516
Alignment:
Q  131 tcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagac 190  Q
    ||||||| ||| || ||||||||||||| ||||||||| |||||||| ||||| ||||||    
T  50445575 tcgaactagagtcgagtttcgagctgaatcaattcttaacgagtcgaatcgagctcagac 50445516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 14188016 - 14188076
Alignment:
Q  77 gaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaact 137  Q
    ||||||||||||||||||||| ||| | |||||||| | |||||| |||| ||||| ||||    
T  14188016 gaactattcgtgaattttaaaggagccaaactcgagtttaaaaaagagtttgtgtcaaact 14188076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 42936376 - 42936408
Alignment:
Q  146 gtttcgagctgaaccaattcttatcgagtcgag 178  Q
    ||||||||||||||||||| |||||||||||||    
T  42936376 gtttcgagctgaaccaatttttatcgagtcgag 42936408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 36926587 - 36926406
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| ||||||||||||| |||||| ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||     
T  36926587 agcaaccgaactgaacctaacgagccgaatcgaactgttcgtgaattttaaatgagccgaactcgagatgaaaaaatagttcgtgtcgaactcgagccga 36926488  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||| ||||| | ||||||||||||||||| ||||||||    
T  36926487 gtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcgattcgactcgactcatttccagccctagtt 36926406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 5776527 - 5776705
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||     
T  5776527 agcaaccgaactgaacctaacgagccgaaccgaattgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcttgtcgaactcgagccga 5776626  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||||| |||||||||||||||||| |||| |||| ||| ||||  | ||||||||||||||||| |||||    
T  5776627 gtttcgagctgaactaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagcccta 5776705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 7444007 - 7443827
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||||||||||||| ||||| |||| ||||||||| ||||||||  |||||||||  ||||||||||||||||||||||| |||||||||||||||||     
T  7444007 agcaaacgaactgaacctaacaagccaaaccgaactgttcgtgaacattaaacgagctgaactcgagctgaaaaaatagtttgtgtcgaactcgagccga 7443908  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    ||||||| | ||||||||||||||||||||||| |||| |||||||||||||  | |||||||||||||||||||||||||    
T  7443907 gtttcgaaccgaaccaattcttatcgagtcgagccgagctcagacagattcggttcgactcgactcatttccaaccctagt 7443827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 46 - 221
Target Start/End: Original strand, 3931310 - 3931486
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaa-aatagttcgtgtcgaactcgagccg 144  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  3931310 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaaatagttcgtgtcgaactcgagccg 3931409  T
Q  145 ggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacc 221  Q
     ||||||||| ||||||||||||||||||||||| |||| |||||||| ||||  | ||||| ||||||||||||||    
T  3931410 agtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcggttggactcaactcatttccaacc 3931486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 666178 - 666350
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||| |||||||||||||||||     
T  666178 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaacttgagctgaaaaaatagtttgtgtcgaactcgagccga 666277  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||||||||| |||||||||||||||||||| || |||| |||||||  ||||  | |||||||||||||||||    
T  666278 gtttcgagccgaaccaattcttatcgagtcaagccgagctcagacatgttcggttcgactcgactcatttcca 666350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 26215895 - 26215723
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||| | ||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||     
T  26215895 agcaaccgaactgaacctaacgagtcaaaccgaactgttcgtgaactttaaacgagccgaactcgagttgaaaaaatagttcgtgtcgaactcgagccga 26215796  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||||||||| ||||||||||||||||||||||| |||| |||| ||| ||||  | |||||||||||||||||    
T  26215795 gtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttcca 26215723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 37333876 - 37333697
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaa-tagttcgtgtcgaactcgagccg 144  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||| | ||||||||||||||    
T  37333876 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaaatagttcatatcgaactcgagccg 37333777  T
Q  145 ggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
     ||||||||| ||||||||||||||||||||||| | || |||| ||| ||||  | |||||||||||||||||||||||    
T  37333776 agtttcgagccgaaccaattcttatcgagtcgagccaagctcaggcaggttcggttcgactcgactcatttccaacccta 37333697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 42071698 - 42071520
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  42071698 agcaaccgaactgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 42071599  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| |||||||||||||| |||||||| |||| |||||||  || |  | |||||||||||||| || |||||    
T  42071598 gtttcgagccgaaccaattcttattgagtcgagccgagctcagacatgtttggttcgactcgactcattttcagcccta 42071520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 43052460 - 43052282
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||| ||||| |||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||      
T  43052460 agcaaccgaactgaacctaacgagccgaactgaactgttcgtgaactttaaatgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccaa 43052361  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| ||||||||||||||||||||||| |||| |||| ||| ||||  | ||||||||| ||||||| |||||    
T  43052360 gtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactgatttccagcccta 43052282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 50 - 226
Target Start/End: Original strand, 222909 - 223085
Alignment:
Q  50 aacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggttt 149  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| || ||||    
T  222909 aacgaattgaacctaacgagccgaaccgaactgttcgtgaattttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 223008  T
Q  150 cgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    ||||| || | |||| ||||||||||||| | || |||||||| |||||   ||||| |||||||||||||||||||    
T  223009 cgagccgagcaaatttttatcgagtcgagccaagctcagacaggttcgatccgactcaactcatttccaaccctagt 223085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 49 - 224
Target Start/End: Original strand, 7539616 - 7539791
Alignment:
Q  49 aaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtt 148  Q
    |||||||||||| ||| ||||| |||||||||| ||||| || |||||||||| ||||||||||||||||||| | |||| ||||||||||||||| |||    
T  7539616 aaacgaactgaacctatcgagctgaaccgaactgttcgtaaactttaaacgagccgaactcgagctgaaaaaaaaattcgagtcgaactcgagccgagtt 7539715  T
Q  149 tcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||||||||||||||||||||| |||| ||||||   |||||||  ||||| |||||||||| |||||    
T  7539716 tcgagctgaaccaattcttatcgagtcgagccgagctcagacgagttcgactcaactcggctcatttccagcccta 7539791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 388593 - 388495
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccg 144  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  388593 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccg 388495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 5795493 - 5795640
Alignment:
Q  71 cgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatc 170  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||            |||||||||||||||    
T  5795493 cgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagcc------------gaaccaattcttatc 5795580  T
Q  171 gagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtttca 230  Q
    |||||||| |||| |||| ||| ||||| | |||||||||||||||||  ||||||||||    
T  5795581 gagtcgagccgagctcaggcaggttcgattcgactcgactcatttccagtcctagtttca 5795640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 17025970 - 17026132
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatag-ttcgtgtcgaactcgagccgggtttcgagct 155  Q
    |||| |||||||| ||||||||  | |||| ||| |||||||||| |||||||||| | |||||| || ||||| || |||||||| || |||||||||     
T  17025970 tgaacctaacgagtcgaaccgagttgttcgcgaactttaaacgagccgaactcgagttaaaaaaaaagattcgtttcaaactcgagtcgagtttcgagcc 17026069  T
Q  156 gaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    |||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||    
T  17026070 gaaccaattcttatcgagtcgagtcgagctcagacaagttcgactcgactcgactcatttcca 17026132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 49035027 - 49035205
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||||| ||||||| ||||||||||||| |||||| ||||||||  ||||| |||||||||||||||| |||||| |||||||||| |||||||| ||     
T  49035027 agcaaacaaactgaacctaacgagccgaatcgaactgttcgtgaaccttaaaagagtcgaactcgagctaaaaaaagagttcgtgtcaaactcgagtcga 49035126  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| || | || ||||||| ||||||| |||| |||||||  || || | || |||||||||||||| |||||    
T  49035127 gtttcgagccgagcaaaatcttatcaagtcgagccgagctcagacatgtttgattcgattcgactcatttccagcccta 49035205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 15433789 - 15433697
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccg 144  Q
    ||||||||| |||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15433789 cgaactgaacctaacgagccgaaccgaactgttcatgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccg 15433697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 20400339 - 20400173
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| | |||||||||||||||||| |||||||||| | |||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||    
T  20400339 tgaacctaacgagtcaaaccgaactattcgtgaactttaaacgagccaaactcgagct-aaaaaatggtttgtgtcgaactcgaaccgagtttcaagctg 20400241  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||| | ||| |||||||||||||| ||||     ||| ||| |||||| ||||||||||||||||    
T  20400240 aaccaaatattaccgagtcgagtcgagctcaggtgagttcaactagactcggctcatttccaacccta 20400173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 28950267 - 28950366
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctg-aaaaaatagttcgtgtcgaactcgagccg 144  Q
    ||||| ||||||||| ||||||||| |||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  28950267 agcaaccgaactgaacctaacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaaatagttcgtgtcgaactcgagccg 28950366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 8110934 - 8110805
Alignment:
Q  49 aaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtt 148  Q
    ||||||||| || |||| ||| |||| |||||| || ||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||| |||    
T  8110934 aaacgaactaaacctaatgagtcgaatcgaactgtttgtgaactttaaacgagctgaactcgagctgaaaaaagagttcgtgtcgaactcgagccgagtt 8110835  T
Q  149 tcgagctgaaccaattcttatcgagtcgag 178  Q
    || ||||| | ||||||||||| |||||||    
T  8110834 tcaagctggaacaattcttatcaagtcgag 8110805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 20259953 - 20260070
Alignment:
Q  107 ctcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    |||||||| |||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||  |||||| | | |||    
T  20259953 ctcgagctaaaaaaagagttcgtgtcgaactcgagccgagttttaagctgaaccaattcttatcgagtcgagtcgagctcagacgaattcgagtcggctc 20260052  T
Q  207 gactcatttccaacccta 224  Q
    |||||||| ||| |||||    
T  20260053 gactcattaccagcccta 20260070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 33899578 - 33899727
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| ||||||||    |||||||| |||||||||| ||||||||||||  |||||  |||||| | |||| ||| ||| ||||||||| |    
T  33899578 tgaacctaacgagtcgaaccgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaaaggttcgttttgaacccgaaccgagtttcgagccg 33899677  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    || |||||||||||||||||||||||| | |||||||||||||| |||||    
T  33899678 aatcaattcttatcgagtcgagtcgagctgagacagattcgactcgactc 33899727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 8390079 - 8390245
Alignment:
Q  25 acttttgagtaatgtgactcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatag 124  Q
    |||||||| | |||| |||| |||||||||  |||| |||||||||||||||||  | ||||||||  ||||||||| | |||||||||| | ||||  |    
T  8390079 acttttgaattatgttactcgagcaaacgagttgaacctaacgagccgaaccgagttgttcgtgaacattaaacgagccaaactcgagctaagaaaaagg 8390178  T
Q  125 ttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagaca 191  Q
    || || ||||| |||||  | |||||||||||| || |||||||||||||||||||||| |||||||    
T  8390179 tttgtatcgaattcgagttgagtttcgagctgagccgattcttatcgagtcgagtcgagctcagaca 8390245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 18250619 - 18250745
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| ||||||||||| |||||||| |||||||||| |||||||||| |  | |||  |||||| || |||||||| |  ||||||||| |    
T  18250619 tgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactcgagttagagaaaaggttcgtttcaaactcgagtcaagtttcgagccg 18250718  T
Q  157 aaccaattcttatcgagtcgagtcgag 183  Q
    |||||||||||||||||||||||||||    
T  18250719 aaccaattcttatcgagtcgagtcgag 18250745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 45054960 - 45054811
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  ||||||| |||||||||| |||||||||||  ||||||  |||||| | ||||||||| || ||||| ||| |    
T  45054960 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcaagccg 45054861  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    |||||||||||||||||||||| | || |||||||  ||||||| |||||    
T  45054860 aaccaattcttatcgagtcgagccaagctcagacaagttcgactcgactc 45054811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 22074723 - 22074610
Alignment:
Q  62 ctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaacca 161  Q
    |||||||| ||||||||  | ||||||||||||||||||| |||| | ||||   ||||| ||||| | ||||||||||| || ||||||||| ||||||    
T  22074723 ctaacgagtcgaaccgagttgttcgtgaattttaaacgagccgaatttgagccataaaaaaagttcatatcgaactcgagtcgagtttcgagccgaacca 22074624  T
Q  162 attcttatcgagtc 175  Q
    ||||||||||||||    
T  22074623 attcttatcgagtc 22074610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 11596405 - 11596524
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  ||||||| |||||||||| |||| ||||||  ||||||  |||||| | |||||||||     ||||||||||    
T  11596405 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaaatcgagcccaaaaaaaggttcgttttgaactcgag-----tttcgagctg 11596499  T
Q  157 aaccaattcttatcgagtcgagtcg 181  Q
    |||||||||||||||||||||||||    
T  11596500 aaccaattcttatcgagtcgagtcg 11596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 37106323 - 37106152
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatag-ttcgtgtcgaactcgagccggg 146  Q
    |||||||| | || |||| |||||||||| |||| |||||||| |||||| ||| ||||||  ||||||||||| |  |||||||| ||||||| ||| |    
T  37106323 caaacgaatttaacctaatgagccgaaccaaactgttcgtgaactttaaatgagccgaacttaagctgaaaaaaaaaattcgtgtcaaactcgaaccgag 37106224  T
Q  147 tttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
      ||||   ||  ||||||||| |||||||||||||  |||||||| ||||| | |||||||||||||||||    
T  37106223 gctcgaatcgagtcaattcttaacgagtcgagtcgaactcagacaggttcgattcgactcgactcatttcca 37106152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 18740826 - 18740953
Alignment:
Q  51 acgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttc 150  Q
    ||||| |||| |||||||||||||||||  | |||||||| ||||||||||||||||||||| | ||||||   || || || |||||||| || |||      
T  18740826 acgaattgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagtcgaactcgagtttaaaaaaagatttgtttcaaactcgagtcgagttat 18740925  T
Q  151 gagctgaaccaattcttatcgagtcgag 178  Q
    || | ||| |||||||||||||||||||    
T  18740926 gaaccgaatcaattcttatcgagtcgag 18740953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 35544137 - 35544275
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcg 151  Q
    |||| |||| |||||||||| |||||| || |||||||| |||||||||| ||||||| || |  | |||| ||| || || ||||| |  || ||||||    
T  35544137 cgaattgaacctaacgagccaaaccgagctgttcgtgaactttaaacgagccgaactcaagttagagaaat-gtttgtttcaaactcaaatcgagtttcg 35544235  T
Q  152 agctgaaccaattcttatcgagtcgagtcgagatcagaca 191  Q
    ||| |||||||||||||||||||||| ||||| |||||||    
T  35544236 agccgaaccaattcttatcgagtcgaatcgagctcagaca 35544275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 39429586 - 39429503
Alignment:
Q  92 tttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtc 175  Q
    ||||||||||| ||||||||| | |||||| ||||||||||||||||||  |  ||||||||  ||||||||||||||||||||    
T  39429586 tttaaacgagttgaactcgagtttaaaaaagagttcgtgtcgaactcgaatcaagtttcgagtcgaaccaattcttatcgagtc 39429503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 45174792 - 45174637
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||||||||||||| |||||||||||||||||| | |||||||| ||||||           ||||||||||||||||||| |||||||||||||||      
T  45174792 agcaaacgaactgaacctaacgagccgaaccgaattgttcgtgaactttaaa-----------cgagctgaaaaaatagttcatgtcgaactcgagcc-- 45174706  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
              |||||||||||||| |||||||| |||| |||||||| ||||  | |||||||||||||| || |||||    
T  45174705 ----------gaaccaattcttattgagtcgagccgagctcagacaggttcggttcgactcgactcattttcagcccta 45174637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 30919008 - 30918930
Alignment:
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| || ||||  | ||||||| ||||||||| |||||    
T  30919008 gtttcgagctgaaccaattcttatcgagttgagtcgagctcagataggttcggttcgactcgattcatttccagcccta 30918930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 23224439 - 23224571
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaact---attcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccg 144  Q
    |||| ||||||||||||||||| | |||| || |   |||| | || |||||||||||| ||||| ||||||||||||| || |||||| |||||| | |    
T  23224439 caaatgaactgaatctaacgagtcaaaccaaattgtaattcataaactttaaacgagtcaaactcaagctgaaaaaataatttgtgtcgtactcgaacag 23224538  T
Q  145 ggtttcgagctgaaccaattcttatcgagtcga 177  Q
     |||| ||| ||||||||| ||||| |||||||    
T  23224539 agttttgagttgaaccaatacttattgagtcga 23224571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 26719229 - 26719153
Alignment:
Q  149 tcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtttca 230  Q
    |||||| |||||||||||||||||||||||      |||||||||||||||| |||||||||||| |||| ||||| |||||    
T  26719229 tcgagccgaaccaattcttatcgagtcgagc-----tcagacagattcgactcgactcgactcatgtccagccctactttca 26719153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 37402000 - 37402176
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaata-gttcgtgtcgaactcgagccggg 146  Q
    |||||||| |||| |||| ||| |||||| |||| |||||||| |||||| | | |||||| ||||| |||||| | ||||||||| |||| || |||      
T  37402000 caaacgaattgaacctaatgagtcgaaccaaactgttcgtgaactttaaaagcgccgaacttgagctaaaaaaaaaagttcgtgtcaaactagaaccgaa 37402099  T
Q  147 tttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
     ||||| | || |||||||||| | |||||||||||| ||| |||  ||||| || | |||||||||||||| |||||    
T  37402100 gttcgaaccgagccaattcttaactagtcgagtcgagctcatacaagttcga-ttcaatcgactcatttccagcccta 37402176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 41449314 - 41449193
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||||||||||||  |||||||    |||||||| ||||||||||  |||||||||||  |||||  ||| || ||||| ||||| ||  |||||||| |    
T  41449314 tgaatctaacgagttgaaccgagtagttcgtgaactttaaacgagctgaactcgagctagaaaaaaggtttgtatcgaattcgagtcgaatttcgagccg 41449215  T
Q  157 aaccaattcttatcgagtcgag 178  Q
    | ||||||||||||||||||||    
T  41449214 agccaattcttatcgagtcgag 41449193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 17608204 - 17608028
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||  ||| | |||| |||||||| ||||| |||| |||| |||||||  ||||| ||||| |||| ||||||| |||       
T  17608204 caaacgaaatgaacctaatgagttgaatcaaactgttcgtgaactttaagcgagccgaattcgagctagaaaaaaagttcatgtcaaactcgaaccgaag 17608105  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||| | | ||  ||||||||| ||||||||||| || |||||||| ||| | | ||||| ||||||||||| |||||    
T  17608104 ttcaaaccgagtcaattcttaacgagtcgagtcaagctcagacaggttcaattcgactctactcatttccagcccta 17608028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 42012255 - 42012312
Alignment:
Q  161 aattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    |||||||| |||||||||||||| |||||||  ||||| | |||||||||||||||||    
T  42012255 aattcttaacgagtcgagtcgagctcagacaagttcgattcgactcgactcatttcca 42012312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 178
Target Start/End: Original strand, 23236781 - 23236876
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgag 178  Q
    |||||||| |||||||||| ||||||| ||||  |||||  |||||| | ||| | ||| || ||||||||| || | ||||||||||||||||||    
T  23236781 ttcgtgaactttaaacgagccgaactcaagctagaaaaaaggttcgtattgaatttgagtcgagtttcgagccgagctaattcttatcgagtcgag 23236876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 27232473 - 27232523
Alignment:
Q  174 tcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||| ||||| |||||||||||||| | ||||||||||||||||| |||||    
T  27232473 tcgaatcgagctcagacagattcgattcgactcgactcatttccagcccta 27232523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 31490770 - 31490705
Alignment:
Q  151 gagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttc 216  Q
    |||||||||||||||||||| ||| |||| ||| |||||    ||||||| |||||||||||||||    
T  31490770 gagctgaaccaattcttatcaagttgagtagagctcagatgagttcgactcgactcgactcatttc 31490705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 46574306 - 46574358
Alignment:
Q  172 agtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| |  |||||||| ||||||| ||||||||||||||||| |||||    
T  46574306 agtcgagtcaaattcagacaggttcgactcgactcgactcatttccagcccta 46574358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 1e-59; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 46 - 226
Target Start/End: Original strand, 39471041 - 39471221
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    |||||||||||| || ||||||||||||| |||||| |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||     
T  39471041 agcaaacgaactaaacctaacgagccgaatcgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 39471140  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||| ||||  | ||||||||||||||||| |||||||    
T  39471141 gtttcgagccgaaccaattcttatcgagtcgagccgagttcagacaggttcggttcgactcgactcatttccagccctagt 39471221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 32688737 - 32688567
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||| |     
T  32688737 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcatgtcaaactcgagctga 32688638  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttc 216  Q
    ||||||||| ||||||||| ||||||||||||| |||| |||||||||||||  |  ||||||||||||||    
T  32688637 gtttcgagccgaaccaatttttatcgagtcgagccgagctcagacagattcggttcaactcgactcatttc 32688567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 50 - 227
Target Start/End: Complemental strand, 52198950 - 52198773
Alignment:
Q  50 aacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggttt 149  Q
    |||||| |||| ||||||||||||||| |||| || ||||| |||||||||||| || |||||||||||||| ||||||||||||||||||| || ||||    
T  52198950 aacgaattgaacctaacgagccgaaccaaactgtttgtgaactttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 52198851  T
Q  150 cgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    ||||| || |  |||| |||||||||||| |||| |||||||| ||||  | ||||||||||||||||| ||||||||    
T  52198850 cgagccgagcagattcatatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccagccctagtt 52198773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 38644191 - 38644358
Alignment:
Q  50 aacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggttt 149  Q
    |||||| |||| |||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||| || ||||    
T  38644191 aacgaattgaacctaacgagtcgaaccgaactattcgtgaactttaaacaagtcgaattcgagctgaaaaaa-agttcgtgtcgaactcgagtcgagttt 38644289  T
Q  150 cgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
     |||| |||| |||||||||| ||||||| |||| |||||||| ||||  | ||||| |||||||||||    
T  38644290 tgagccgaacaaattcttatctagtcgagccgagctcagacaggttcggttcgactccactcatttcca 38644358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 39943697 - 39943838
Alignment:
Q  49 aaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtt 148  Q
    ||||||| |||| ||| |||||||||| ||||| | |||||| ||||||| || ||||||| ||||||||||| |||||||||| ||||||||||| |||    
T  39943697 aaacgaaatgaacctatcgagccgaactgaactgtacgtgaactttaaacaagccgaactcaagctgaaaaaaaagttcgtgtcaaactcgagccgagtt 39943796  T
Q  149 tcgagctgaaccaattcttatcgagtcgagtcgagatcagac 190  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  39943797 tcgagctgaaccaattcttatcgagtcgagccgagctcagac 39943838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 33439207 - 33439386
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||||||||| |||| |||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||||| ||  |     
T  33439207 caaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagtcgaacttgagctgaaaaaa-agttcgtgtcaaactcgaaccaagg 33439305  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagttt 228  Q
     |||| | || ||||||||||  ||||||||||||| ||||| || ||||| | |||||||||||||||||||||||||||    
T  33439306 ctcgaaccgagccaattcttaatgagtcgagtcgagctcagataggttcgattcgactcgactcatttccaaccctagttt 33439386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 25253015 - 25252882
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    |||||||| |||||||||| |||||||||||| || ||| ||||||| | ||||||||| || |||| |||| |||||||||||||||||||||||| ||    
T  25253015 ttcgtgaactttaaacgagccgaactcgagcttaacaaaaagttcgtattgaactcgagtcgagttttgagccgaaccaattcttatcgagtcgagttga 25252916  T
Q  183 gatcagacagattcgacttgactcgactcatttc 216  Q
    | |||||||| ||||||| |||||||||||||||    
T  25252915 gctcagacaggttcgactcgactcgactcatttc 25252882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 46294205 - 46294377
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcg 151  Q
    ||||||||| |||||||  ||||||||||| |||| |||  |||||||||  ||||||||||| |||||| |||||||||| | |||||| || ||||||    
T  46294205 cgaactgaacctaacgaatcgaaccgaactgttcgcgaaccttaaacgagctgaactcgagctaaaaaaagagttcgtgtcaatctcgagtcgagtttcg 46294304  T
Q  152 agctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    | |||||||||||||||| | |||||| |||| ||||||   ||||||| ||||||||||||||||| |||||    
T  46294305 aactgaaccaattcttattgcgtcgagccgagctcagacgagttcgactcgactcgactcatttccagcccta 46294377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 54432864 - 54433019
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| ||||||||  | ||||||||||||||||||| |||||||||||| ||||||  |||||| | ||||||||||||                
T  54432864 tgaacctaacgagtcgaaccgagttgttcgtgaattttaaacgagccgaactcgagctaaaaaaaaggttcgttttgaactcgagccg------------ 54432951  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  54432952 aaccaattcttatcgagtcgagtcgagctcagacatattcgacttgactcgactcatttccagcccta 54433019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 5418210 - 5418043
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    ||||||||||||||||||||||  |  ||||||| ||||||||||  ||| ||||||  ||||||  |||||| | ||||||||| || ||||||||| |    
T  5418210 tgaatctaacgagccgaaccgagttgctcgtgaactttaaacgagctgaaatcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 5418111  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||||||||||||| || |||  |||||||  ||||||| ||||||||||||||||| |||||    
T  5418110 aaccaattcttatcgagtcaagccgaactcagacaagttcgactcgactcgactcatttccagcccta 5418043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 33896057 - 33895916
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    |||||||| |||||||||| |||| ||||||| ||||||  |||||||||||||||||| || |||| ||||||||||| ||||||| ||||||||||||    
T  33896057 ttcgtgaactttaaacgagccgaattcgagctaaaaaaaaggttcgtgtcgaactcgagtcgagtttggagctgaaccatttcttattgagtcgagtcga 33895958  T
Q  183 gatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    | |||||||  ||||  | |||| ||||||||| ||||||||    
T  33895957 gctcagacaagttcggttcgacttgactcattttcaacccta 33895916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 7029312 - 7029135
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||||| |||| || |||| || || |||| || | ||||| || |||||||||| ||||||  | || |||||| | ||||||||||||||||||||     
T  7029312 agcaaacaaactaaacctaaagaacctaaccaaattgttcgtaaactttaaacgagccgaacttaaacttaaaaaaaa-ttcgtgtcgaactcgagccga 7029214  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||||| ||||||||||||||||||||||  |||||    ||||||| ||||||||||||||||| |||||    
T  7029213 gtttcgagctgaacaaattcttatcgagtcgagtcgaactcagatgagttcgactggactcgactcatttccagcccta 7029135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 23206899 - 23206997
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccg 144  Q
    ||||| ||||||||| |||||||| ||||||||||| |||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| ||||||    
T  23206899 agcaaccgaactgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactcgagctcaaataatagttcgtgtcgaactagagccg 23206997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 40943061 - 40942913
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| ||||||||    |||||||| |||||| ||| ||||||||||||  |||||  |||||| | |||||||||||| ||||||||  |    
T  40943061 tgaacctaacgagtcgaaccgagtggttcgtgaactttaaatgagccgaactcgagctagaaaaag-gttcgttttgaactcgagccgagtttcgagtcg 40942963  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  40942962 aaccaattcttatcgagttgagtcgagctcagacagattcgactcgactc 40942913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 225
Target Start/End: Original strand, 53530121 - 53530297
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    ||||| || ||||| ||| |||| ||||| |||| |||||||| |||||||||| |||||| |||||||||||| |||| ||||  ||||||| ||| |     
T  53530121 caaacaaattgaatttaatgagctgaaccaaactgttcgtgaactttaaacgagccgaacttgagctgaaaaaa-agtttgtgttaaactcgaaccgagg 53530219  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    ||| | |||| |||||||||| |||||||||||||| |||||||  ||||| | || |||||||||||||| ||||||    
T  53530220 ttcaaactgagccaattcttaacgagtcgagtcgagctcagacatgttcgattcgattcgactcatttccagccctag 53530297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 224
Target Start/End: Complemental strand, 30740872 - 30740732
Alignment:
Q  84 tcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgag 183  Q
    ||||||| |||||||||| |||||||||||| ||||||  |||||||||||||||||| || |||||||||  ||||| ||||||||||||| |||  ||    
T  30740872 tcgtgaactttaaacgagccgaactcgagctaaaaaaaaggttcgtgtcgaactcgagtcgagtttcgagccaaaccatttcttatcgagtcaagtaaag 30740773  T
Q  184 atcagacagattcgacttgactcgactcatttccaacccta 224  Q
     |||||||  ||||  | ||||||||||||||||| |||||    
T  30740772 ctcagacaagttcggttcgactcgactcatttccagcccta 30740732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 41609478 - 41609312
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| ||||| |||||||||||| |  ||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||| |      
T  41609478 agcaaccgaactgaacctaacaagccgaaccgaagt--tcgtgaccttcaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagtc-- 41609383  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
              ||||||||||||||||||||||| |||| |||| ||| ||||  | ||||||||||||||||| |||||||    
T  41609382 ----------gaaccaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagccctagt 41609312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 7834237 - 7834068
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaata--gttcgtgtcgaactcgagcc 143  Q
    |||||||||  |||| |||| |||  |||||||||| |||||||| |||||| |||  ||||||||||| |||||| |  |||||| || |||||||       
T  7834237 agcaaacgagttgaacctaatgagttgaaccgaactgttcgtgaactttaaatgagctgaactcgagctaaaaaaaaaaggttcgtttcaaactcgaatt 7834138  T
Q  144 gggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    | |||| |||||||||||||||||||||||||||||     |||||||| ||||||| |||||||||||||||||    
T  7834137 gagttttgagctgaaccaattcttatcgagtcgagt-----tcagacaggttcgactcgactcgactcatttcca 7834068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 39133893 - 39133810
Alignment:
Q  109 cgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacag 192  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  39133893 cgagctgaaaaaataatttgtgtcgaactcgagccgagtttcgagccgaaccaattcttatcgagtcgagctgagctcagacag 39133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 45714263 - 45714114
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| ||||| |||| |||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||||| ||            || |||||    
T  45714263 aacgagctgaaccaaactgttcgtgaactttaaacgagtcgaacttgagctgaaaaaaaagttcgtgtcaaactcgaacc------------gagccaat 45714176  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    |||||  ||||||||||||| ||||| || ||||| |  |||||||||||||||||||||||    
T  45714175 tcttaatgagtcgagtcgagctcagataggttcgattcaactcgactcatttccaaccctag 45714114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 27040523 - 27040686
Alignment:
Q  63 taacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaa 162  Q
    |||||||  |||||||| |||||| ||| || || ||||||||| | ||||| ||| || |||| ||   ||||||||| || ||||||||| |||||||    
T  27040523 taacgagttgaaccgaaatattcgcgaacttcaaccgagtcgaatttgagctaaaataaaagtttgtaatgaactcgagtcgagtttcgagccgaaccaa 27040622  T
Q  163 ttcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
     ||||| |||||||||| ||| ||| |||  ||||||| ||||||||||||||||| |||||||    
T  27040623 atcttaacgagtcgagttgagctcaaacaagttcgactcgactcgactcatttccagccctagt 27040686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 54394017 - 54394181
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||||||||  |||| |||||||| |||||||||| |||||| |||||| ||||| |||||||||| ||||||| ||| |     
T  54394017 caaacgaattgaacctaatgagccgaactaaactgttcgtgaactttaaacgagccgaacttgagctggaaaaaaagttcgtgtcaaactcgaaccgag- 54394115  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
               |||||||||| |||||||||| ||  |||||||| ||||| | |||||||||||||||||||||||    
T  54394116 -----------ccaattcttaacgagtcgagttgaactcagacaggttcgattcgactcgactcatttccaacccta 54394181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 12710227 - 12710096
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctga-aaaaatagttcgtgtcgaactcgagccgggtttcgagct 155  Q
    |||| |||||||||||||||||  | |||| ||| |||||||||| |||||||||| | | |||||  |||||| || |||||||| || |||||||||     
T  12710227 tgaacctaacgagccgaaccgagttgttcgcgaactttaaacgagccgaactcgagttaagaaaaaaggttcgtttcaaactcgagtcgagtttcgagcc 12710128  T
Q  156 gaaccaattcttatcgagtcgagtcgagatcag 188  Q
    | |||||||||||||||||||||||||| ||||    
T  12710127 g-accaattcttatcgagtcgagtcgagctcag 12710096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 215
Target Start/End: Original strand, 20407769 - 20407881
Alignment:
Q  103 cgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttg 202  Q
    |||||| ||||| | |||| ||||||| ||||||||||| || ||||||||| |||||||| |||||||||||||| |||| ||| |||  || |||| |    
T  20407769 cgaacttgagctaagaaaaaagttcgtatcgaactcgagtcgagtttcgagccgaaccaatacttatcgagtcgagccgagctcaaacacgttggactcg 20407868  T
Q  203 actcgactcattt 215  Q
    |||||||||||||    
T  20407869 actcgactcattt 20407881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 15823189 - 15823250
Alignment:
Q  93 ttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagc 154  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||    
T  15823189 ttaaacgagtcgaactcgagctgaaaaaagagttcatgtcgaactcgagtcgagtttcgagc 15823250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 45994947 - 45994789
Alignment:
Q  67 gagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattct 166  Q
    |||||||||| |||| || ||||| |||||||||| |||||| |||||||||||| |||||||||| ||||  |  || | ||||| |  |  |||||||    
T  45994947 gagccgaaccaaactgtttgtgaactttaaacgagccgaacttgagctgaaaaaa-agttcgtgtcaaacttaaatcgaggttcgaaccaagtcaattct 45994849  T
Q  167 tatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    || ||||| |||||||  | ||||| |||||| | |||||||||| ||||||||||||||    
T  45994848 taacgagttgagtcgaacttagacaaattcgattcgactcgactcttttccaaccctagt 45994789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 7521713 - 7521831
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| | |||||| || |||||||||||||||| |||| |||| ||| | ||||||   ||||| ||||||||||| || ||||||||| |    
T  7521713 tgaacctaacgagtcaaaccgagctgttcgtgaattttaaacaagtcaaacttgagttaaaaaaaagattcgtttcgaactcgagtcgagtttcgagccg 7521812  T
Q  157 aaccaattcttatcgagtc 175  Q
    ||| |||| ||||||||||    
T  7521813 aacgaatttttatcgagtc 7521831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 215
Target Start/End: Complemental strand, 51067833 - 51067701
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    ||||| ||||||||| |||||||||||||||  |||||||  || || ||||| |||||  | ||||||||| |||| |||||||||||| | || | ||    
T  51067833 ttcgttaattttaaatgagtcgaactcgagccaaaaaaatgatttgtatcgaagtcgagttgagtttcgagccgaactaattcttatcgattagaattga 51067734  T
Q  183 gatcagacagattcgacttgactcgactcattt 215  Q
    | | |||||  ||||| ||||||||||||||||    
T  51067733 gcttagacaagttcgatttgactcgactcattt 51067701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 52934332 - 52934244
Alignment:
Q  118 aaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    ||||| |||||| |||||||| || || ||||||||| ||  |||||||||||||||||||||||| |||||  ||||||||| |||||    
T  52934332 aaaatggttcgtatcgaactcaagtcgagtttcgagccgagtcaattcttatcgagtcgagtcgagctcagatggattcgactcgactc 52934244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 19561374 - 19561542
Alignment:
Q  51 acgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttc 150  Q
    |||||||||| |||| ||| ||| |||| || ||||  || |||||||||  ||||||| |||| |||||| |||| || ||||||||||  || ||||     
T  19561374 acgaactgaacctaaagagtcgagccgagctgttcgataactttaaacgaaccgaactcaagcttaaaaaaaagtttgtatcgaactcgaatcgagtttt 19561473  T
Q  151 gagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    || || ||| ||||||||||||||||||      ||||||  |||| ||| ||||||||||||||||| |||||    
T  19561474 gaactaaactaattcttatcgagtcgagc-----tcagacgaattcaactcgactcgactcatttccagcccta 19561542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 189
Target Start/End: Complemental strand, 20661842 - 20661709
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  | |||||||| ||||||||||  |||||||| |   |||||  ||| || || ||||| || || |||||||||||    
T  20661842 tgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagctgaactcgaaccttaaaaaaggtttgtatcaaactcaagtcgagtttcgagctg 20661743  T
Q  157 aaccaattcttatcgagtc-gagtcgagatcaga 189  Q
    || ||||| |||||||||| |||||||| |||||    
T  20661742 aatcaatttttatcgagtcagagtcgagctcaga 20661709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 8086903 - 8087028
Alignment:
Q  53 gaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcga 152  Q
    |||||||| |||||||||||||||||  | || | ||| |  || ||||||||  |||||||||||||   ||||||  |||||| ||| || |||||||    
T  8086903 gaactgaacctaacgagccgaaccgagttgtttgcgaactcgaaccgagtcgagttcgagctgaaaaatatgttcgtaacgaactagagtcgagtttcga 8087002  T
Q  153 gctgaaccaattcttatcgagtcgag 178  Q
    ||||||| || | |||||||||||||    
T  8087003 gctgaacaaaattttatcgagtcgag 8087028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 30662736 - 30662885
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||| ||  | |||  ||| |||||||||| | |||| ||| | ||||||  ||| || || ||||||||  | ||||||| | |    
T  30662736 tgaacctaacgagccgaactgagttgttcacgaactttaaacgagccaaacttgagttaaaaaaaaggtttgtttcaaactcgagttgagtttcgaaccg 30662835  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    || |||||||||||||||||| ||||| |||||||| ||| ||| |||||    
T  30662836 aatcaattcttatcgagtcgaatcgagctcagacaggttcaactcgactc 30662885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 35007267 - 35007305
Alignment:
Q  147 tttcgagctgaaccaattcttatcgagtcgagtcgagat 185  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  35007267 tttcgagctgaaccaattcatatcgagtcaagtcgagat 35007305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 9505888 - 9505936
Alignment:
Q  131 tcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagt 179  Q
    |||||||||||  | ||||||||| ||| ||||||||||||||||||||    
T  9505888 tcgaactcgagttgagtttcgagccgaatcaattcttatcgagtcgagt 9505936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 39714892 - 39714828
Alignment:
Q  114 tgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgag 178  Q
    |||||||| |||||||||||||||||||    |||| ||| ||||| ||||||||| ||||||||    
T  39714892 tgaaaaaagagttcgtgtcgaactcgagtaaagttttgagttgaactaattcttattgagtcgag 39714828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 49026059 - 49026015
Alignment:
Q  156 gaaccaattcttatcgagtcgagtcgagatcagacagattcgact 200  Q
    |||||||||||||||||||||||||||| |||  ||| |||||||    
T  49026059 gaaccaattcttatcgagtcgagtcgagctcacgcaggttcgact 49026015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 36538255 - 36538075
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||     
T  36538255 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccaaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 36538156  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||| |||   | ||||||||||||||||| |||||||    
T  36538155 gtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcagttcgactcgactcatttccagccctagt 36538075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 20986242 - 20986070
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    |||||||| ||||||  ||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||     
T  20986242 agcaaacggactgaacttaacgagccgaacagaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcaagccga 20986143  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||| ||||  | |||||||||||||||||    
T  20986142 gtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 20986070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 54 - 228
Target Start/End: Complemental strand, 27633312 - 27633138
Alignment:
Q  54 aactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgag 153  Q
    ||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||| ||||| |||||| ||||||||    
T  27633312 aactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtttgtgttgaacttgagccgagtttcgag 27633213  T
Q  154 ctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagttt 228  Q
    | ||||||||||||||| ||||||| |||| |||| ||| ||||  | ||||||||||||||||| |||||||||    
T  27633212 ccgaaccaattcttatcaagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagccctagttt 27633138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 41958725 - 41958594
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  41958725 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 41958626  T
Q  146 gtttcgagctgaaccaattcttatcgagtcga 177  Q
    ||||||||| ||||||||| ||||||||||||    
T  41958625 gtttcgagccgaaccaatttttatcgagtcga 41958594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 26435945 - 26435776
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||| | |||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||| |||     
T  26435945 agcaaccgaactgaacctaacgagccgaaccgaattgttcgtgaactttaaacaagtcgaactcgagttgaaaaaatatttcgtgtcgaactcgaaccga 26435846  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcattt 215  Q
    ||||||| | ||||||||||||||||| ||||| |||| |||||||||||||  | ||||||||||||||    
T  26435845 gtttcgaaccgaaccaattcttatcgaatcgagccgagctcagacagattcggttcgactcgactcattt 26435776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 52 - 201
Target Start/End: Complemental strand, 12139538 - 12139389
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcg 151  Q
    |||||||||  |||||||| |||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12139538 cgaactgaacttaacgagctgaaccgaacagttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcg 12139439  T
Q  152 agctgaaccaattcttatcgagtcgagtcgagatcagacagattcgactt 201  Q
    ||| ||||||||||||||||||||||  |||| |||||||| ||| ||||    
T  12139438 agccgaaccaattcttatcgagtcgaaccgagctcagacaggttcaactt 12139389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 33831056 - 33830887
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||| ||||| |||||||||||||||||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||      
T  33831056 agcaaccgagctgaacctaacgagccgaaccgaattgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagcc-- 33830959  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
              ||||||||||||||||||||||| |||| |||||||| ||||  | ||||||||||||||||||||||||||    
T  33830958 ----------gaaccaattcttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccaaccctagtt 33830887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 225
Target Start/End: Original strand, 44741262 - 44741437
Alignment:
Q  50 aacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggttt 149  Q
    |||||| |||| |||||||| | ||||||||| |||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||| || ||||    
T  44741262 aacgaattgaacctaacgagtcaaaccgaactgttcgtgaactttaaacgagtcgaatttgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 44741361  T
Q  150 cgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    ||||| || | |||||||||| ||||||| |||| |||||||| ||||  |  |||| ||||||||||||||||||    
T  44741362 cgagccgagcaaattcttatcaagtcgagccgagctcagacaggttcggttcaactcaactcatttccaaccctag 44741437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 2647573 - 2647740
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  ||||||| |||||||||| |||||||||||  ||||||  ||| || | ||||||||| || ||||||||| |    
T  2647573 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttggttttgaactcgagtcgagtttcgagccg 2647672  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||| |||||    
T  2647673 aaccaattcttatcgagtcgagccgagttcagacaaattcgactcgactcgactcatttccagcccta 2647740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 33164526 - 33164691
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||      
T  33164526 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactggagctgaaaaaatagttcgtgtcgaactcgagcc-- 33164623  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccct 223  Q
              ||||||||| ||||||||||||| | |  |||||||||||||  | ||||||||||||||||| ||||    
T  33164624 ----------gaaccaatttttatcgagtcgagccaaattcagacagattcggttcgactcgactcatttccagccct 33164691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 39801270 - 39801156
Alignment:
Q  75 ccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagt 174  Q
    ||||||| || |||||| |||||||||  |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||| ||||||    
T  39801270 ccgaactgtttgtgaatcttaaacgagctgaactcgagctgaaaaaagagttcgtgtcgaactcgagccgaatttcgagctgaactaattcttctcgagt 39801171  T
Q  175 cgagtcgagatcaga 189  Q
    |||| |||| |||||    
T  39801170 cgagccgagctcaga 39801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 34116717 - 34116894
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctg-aaaaaatagttcgtgtcgaactcgagccggg 146  Q
    |||||||| |||| |||| |||||||||| |||| |||||||| |||||||||| | |||| |||||| |||||| || ||||||| ||||||| ||  |    
T  34116717 caaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccaaacttgagctgaaaaaaaaagctcgtgtcaaactcgaaccaag 34116816  T
Q  147 tttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
     || || |||| | |||||||| ||||| |||| ||| |||||||| ||||| | ||||||||||||||||| |||||    
T  34116817 gtttgaactgagctaattcttaacgagttgagttgagctcagacaggttcgattcgactcgactcatttccatcccta 34116894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 38410202 - 38410332
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||||||||| |||| |||||||| |||||||||| | ||||||||||||||||| |||| ||||| | ||||| ||| |     
T  38410202 caaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagcctaactcgagctgaaaaaaaagtttgtgtcaagctcgaaccgagg 38410301  T
Q  148 ttcgagctgaaccaattcttatcgagtcgag 178  Q
    ||||  |||| |||||||||| |||||||||    
T  38410302 ttcggactgagccaattcttaacgagtcgag 38410332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 11027440 - 11027287
Alignment:
Q  71 cgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatc 170  Q
    |||||| |||| |||||||| |||||||||| |||||| ||| || ||||| |||||||||| ||||||| ||| | ||||| | |||| ||||||||      
T  11027440 cgaaccaaactgttcgtgaactttaaacgagccgaacttgagttggaaaaaaagttcgtgtcaaactcgatccgaggttcgaaccgaacaaattcttaat 11027341  T
Q  171 gagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||| |||||||  |||||||  ||||| | ||||||||||||||||| |||||    
T  11027340 gagttgagtcgaactcagacaagttcgattcgactcgactcatttccagcccta 11027287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 39689731 - 39689603
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||||||||| ||||  ||||||| |||||| ||| |||||| ||||||||||||||||| ||||| ||||||||||| |     
T  39689731 caaacgaattgaacctaatgagccgaaccaaactgatcgtgaactttaaaggagccgaacttgagctgaaaaaatagtttgtgtcaaactcgagccgagg 39689632  T
Q  148 ttcgagctgaaccaattcttatcgagtcg 176  Q
    |||||    |||||||||||| |||||||    
T  39689631 ttcgaatcaaaccaattcttaacgagtcg 39689603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 40458499 - 40458381
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||| ||||||||| |  |||||||||||||||||| |||||||||| ||||||||  |||||| ||||||||||| || |||| |||| |    
T  40458499 tgaacctaacgagtcgaaccgaattgctcgtgaattttaaacgagccgaactcgagttgaaaaaaatgttcgtttcgaactcgagtcgagttttgagccg 40458400  T
Q  157 aaccaattcttatcgagtc 175  Q
    || || ||||||| |||||    
T  40458399 aatcatttcttattgagtc 40458381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 30711627 - 30711535
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcga 140  Q
    |||||||| | || |||| |||||||||| |||| |||||||| |||||||||| |||||| |||||||||||| |||||||||| |||||||    
T  30711627 caaacgaattaaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaacttgagctgaaaaaaaagttcgtgtcaaactcga 30711535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 18053534 - 18053394
Alignment:
Q  86 gtgaattttaaacgagtcgaactcgagctgaaaaaata--gttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgag 183  Q
    ||||| |||||||||| ||||||  ||||||||||| |  ||||||| | ||||| | ||| | ||| | | || |||||||||| ||||||||||||||    
T  18053534 gtgaactttaaacgagccgaacttaagctgaaaaaaaaaagttcgtgccaaactcaaaccgaggttcaaaccgagccaattcttaacgagtcgagtcgag 18053435  T
Q  184 atcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||  ||||| | ||||||||||||||||| |||||    
T  18053434 atcagacaagttcgattcgactcgactcatttccagcccta 18053394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 18667290 - 18667125
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||| ||||||||||||  || |||| || |||||||||| | |||| ||||||||||||   || || ||||||||||| |  ||||||||| |    
T  18667290 tgaacctaatgagccgaaccgagttactcgtaaactttaaacgagccaaacttgagctgaaaaaaa--tttgtttcgaactcgagtcaagtttcgagccg 18667193  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    || | ||||||||||||||||| | || ||||||   ||||| | ||||||| |||||||||||||||    
T  18667192 aagctattcttatcgagtcgagccaagctcagacgagttcgattcgactcgattcatttccaacccta 18667125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 40675323 - 40675211
Alignment:
Q  66 cgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattc 165  Q
    |||||||||||||  | || ||||| |||||||||| | || | ||| | ||||||| |||||| ||||||||||| || ||||||||| ||||||||||    
T  40675323 cgagccgaaccgagttgtttgtgaactttaaacgagccaaatttgagttaaaaaaatggttcgtatcgaactcgagtcgagtttcgagccgaaccaattc 40675224  T
Q  166 ttatcgagtcgag 178  Q
    ||||||| |||||    
T  40675223 ttatcgaatcgag 40675211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 34064307 - 34064242
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcga 111  Q
    ||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||| |||||||||    
T  34064307 agcaaccgaactgaacctaacgaaccgaaccgaactgttcgtgaactttaaacgagccgaactcga 34064242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 3409848 - 3409939
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagt 174  Q
    |||||||| |||||||||| |||||||||| | ||||||  |||||| ||||||||||| || ||||| ||| || | ||||||||||||||    
T  3409848 ttcgtgaactttaaacgagccgaactcgagttaaaaaaaaggttcgtatcgaactcgagtcgagtttcaagccgagctaattcttatcgagt 3409939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 1093969 - 1093911
Alignment:
Q  169 tcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    ||||||||||||||  |||||||| ||||||| ||||||||||||||||| ||||||||    
T  1093969 tcgagtcgagtcgaactcagacaggttcgactcgactcgactcatttccagccctagtt 1093911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 29804399 - 29804307
Alignment:
Q  88 gaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtc 180  Q
    |||||||||||||| |||||||||| | | ||||  |||| | ||||||| ||| || ||||||||| ||||||||| |||||||||| ||||    
T  29804399 gaattttaaacgagccgaactcgagttaagaaaaaggttcatttcgaacttgagtcgagtttcgagccgaaccaatttttatcgagtcaagtc 29804307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 224
Target Start/End: Complemental strand, 41648879 - 41648743
Alignment:
Q  88 gaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatca 187  Q
    |||||||||| ||| ||||||| |||| ||||||   || || |  |||||||| ||  ||| |||||||||||||| |||||||||  |||| |  |||    
T  41648879 gaattttaaatgagccgaactcaagcttaaaaaaagatttgttttaaactcgagtcgaattttgagctgaaccaatttttatcgagttaagtcaaactca 41648780  T
Q  188 gacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||| ||||||| |||||||||||||| || |||||    
T  41648779 gacagtttcgactcgactcgactcattttcagcccta 41648743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 33475704 - 33475654
Alignment:
Q  156 gaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    ||||||||||||| ||||||||||| || |||||||| ||||| |||||||    
T  33475704 gaaccaattcttaacgagtcgagtcaagttcagacaggttcgatttgactc 33475654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 35380455 - 35380354
Alignment:
Q  123 agttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccc 222  Q
    |||||||  ||||||  ||||| ||||||||| || | |||||||||||||||||| |||| | || ||  |||||||  |||| |||||||||||| ||    
T  35380455 agttcgttacgaactttagccgagtttcgagccgatctaattcttatcgagtcgagccgagctaagtcaacttcgactcaactccactcatttccaaacc 35380356  T
Q  223 ta 224  Q
    ||    
T  35380355 ta 35380354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 32157347 - 32157525
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||      
T  32157347 agcaaacgaactgaatctaacgagccgaaccgaactggtcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccaa 32157446  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||||||| |||   | ||||||||||||||||| |||||    
T  32157447 gtttcgagccgaaccaattcttatcgagtcgagccgagcccagacaggttcagttcgactcgactcatttccagcccta 32157525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 18879798 - 18879629
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||      
T  18879798 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaatgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccaa 18879699  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcattt 215  Q
    ||||||||| ||||||||||||||||||||||| |||  |||||||||||||  | ||||||||||||||    
T  18879698 gtttcgagccgaaccaattcttatcgagtcgagccgaactcagacagattcggttcgactcgactcattt 18879629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 27905652 - 27905480
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcg 151  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  27905652 cgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaattcgggctgaaaaaatagttcgtgtcgaactcgagccgagtttcg 27905553  T
Q  152 agctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
     || ||||||||||||||| ||||||| |||| ||||| |  ||||  | ||||||||||||||||| |||||    
T  27905552 tgccgaaccaattcttatcaagtcgagccgagctcagataagttcggttcgactcgactcatttccagcccta 27905480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 49 - 224
Target Start/End: Complemental strand, 43385974 - 43385798
Alignment:
Q  49 aaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaata-gttcgtgtcgaactcgagccgggt 147  Q
    |||||||||||| ||| |||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||| | ||| ||||||||||||||||| ||    
T  43385974 aaacgaactgaacctatcgagccgaactgaactattcgtgaactttaaacgagccgaactcaagctgaaaaaaaaagtttgtgtcgaactcgagccgagt 43385875  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||||||||||||||||||||||||| |||| ||||||   ||||||| |||||| | |||||||| |||||    
T  43385874 ttcgagctgaaccaattcttatcgagtcgagccgagctcagacgagttcgactcgactcggcacatttccagcccta 43385798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 22921609 - 22921438
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||       
T  22921609 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagatgaaaaaatagttcgtgtcgaattcgagc--- 22921513  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
        ||||| ||||||||| ||||||||| |||||||| ||||||||  |||| | ||||||||||||||||| |||||    
T  22921512 ----cgagcagaaccaatttttatcgagtggagtcgagctcagacaggctcgattcgactcgactcatttccagcccta 22921438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 34720043 - 34720205
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| |||||||||| |||||||| ||||||||||  ||||||||||| |||||| ||||||  ||||||||||| || ||||||| | ||||||||    
T  34720043 aacgagctgaaccgaactgttcgtgaactttaaacgagctgaactcgagcttaaaaaaaagttcgcttcgaactcgagtcgagtttcgaaccgaaccaat 34720142  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    |||||||||||||| ||||| || ||||| ||||||| ||||||||||||||||| |||||||    
T  34720143 tcttatcgagtcgaatcgagctcggacaggttcgactcgactcgactcatttccagccctagt 34720205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 15932136 - 15931979
Alignment:
Q  25 acttttgagtaatgtgactcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatag 124  Q
    |||||||||| |||||| |  | ||||||||||||| ||| |||||||||||||||| |||||||| |||||||||  ||||||||||  ||||||| ||    
T  15932136 acttttgagttatgtgatttgaacaaacgaactgaacctatcgagccgaaccgaactgttcgtgaactttaaacgaaccgaactcgagtcgaaaaaagag 15932037  T
Q  125 ttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    ||||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  15932036 ttcgtgttgaactcgaaccgagtttcaagctgaaccaattcttatcgagtcgagtcga 15931979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 3805393 - 3805513
Alignment:
Q  104 gaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttga 203  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||||| ||||  | ||    
T  3805393 gaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcggttcga 3805492  T
Q  204 ctcgactcatttccaacccta 224  Q
    ||||||||||||||| |||||    
T  3805493 ctcgactcatttccagcccta 3805513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 27450970 - 27451130
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| |||||||||| |||||||| |||||||||| |||||||||| | ||||||  |||||  |||||||||||  | ||||||||| ||||||||    
T  27450970 aacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagtttaaaaaaatgttcgcttcgaactcgagttgagtttcgagccgaaccaat 27451069  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||||| ||||| |||||||| || |||| |||||||||||||||||||||||    
T  27451070 tcttatcgagtcgaatcgagctcagacaggtttgactcgactcgactcatttccaacccta 27451130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 34724019 - 34724181
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| |||||||||| |||||||| | ||||||||  ||||||||||| ||||||  |||||  ||||||||||| || ||||||| ||||||||||    
T  34724019 aacgagctgaaccgaactgttcgtgaactctaaacgagctgaactcgagcttaaaaaaaggttcgcttcgaactcgagtcgagtttcgaactgaaccaat 34724118  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
    |||||||||||||| ||||| || ||||| ||||||| ||||||||||||||||| |||||||    
T  34724119 tcttatcgagtcgaatcgagctcggacaggttcgactcgactcgactcatttccagccctagt 34724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 29322229 - 29322063
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||      
T  29322229 agcaaccgaactgaacctaacgagccgaaccgaacagttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagcc-- 29322132  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
              ||||||||||||||||||||||| |||| |||| ||| ||||  | ||||||||||||||||| |||||    
T  29322131 ----------gaaccaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagcccta 29322063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 57 - 227
Target Start/End: Original strand, 5385062 - 5385232
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    ||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||| |  ||||||||| |    
T  5385062 tgaatctaatgagccgaaccgaattgttcgtgaactttaaacgagtcgaactcgagctaaaaaaagagttcgtgttgaactcgagtcaagtttcgagccg 5385161  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    ||| |||| | ||||| |||| ||||| ||||| |  ||||| | ||||||||||||||||| ||||||||    
T  5385162 aacaaattttaatcgaatcgaatcgagctcagaaaagttcgattcgactcgactcatttccagccctagtt 5385232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 1224742 - 1224573
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||     
T  1224742 agcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttaaacgagtcgaactcgagcggaataaagagttcgtgtcgaactcgagtcga 1224643  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcattt 215  Q
    ||||||||  || | || |||||| |||||||| |||| | |||||| ||||| | || |||||||||||    
T  1224642 gtttcgagtcgagcaaaatcttattgagtcgagccgagcttagacaggttcgattcgattcgactcattt 1224573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 26298065 - 26297904
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||| | ||||||  |||||  ||||||||||  || ||||||||| ||||||||    
T  26298065 aacgagctgaaccgaactattcgtgaactttaaacgagccgaactcgagtttaaaaaaaggttcgcttcgaactcgaatcgagtttcgagccgaaccaat 26297966  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    |||||||||||||| ||||| ||| |||| || ||||||| ||||||||||| || ||||||    
T  26297965 tcttatcgagtcgaatcgagctcacacaggtttgacttgattcgactcattttcagccctag 26297904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 26299606 - 26299446
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| |||||||||| |||||||| |||||||||| |||||||||| | ||||||  ||||   ||||||||||| || ||||||||| ||||||||    
T  26299606 aacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagtttaaaaaaaggttcacttcgaactcgagtcgagtttcgagccgaaccaat 26299507  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||||||||| ||||| |||||||  || |||| |||||||||||||| ||||||||    
T  26299506 tcttatcgagtcgaatcgagctcagacaagtttgactcgactcgactcattttcaacccta 26299446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 39408879 - 39408737
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| |||||||||| |||||||| |||||||||| |||||||||||| |||||| ||||||  ||||||||||| || ||||||||| ||||||||    
T  39408879 aacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagcttaaaaaaaagttcgcttcgaactcgagtcgagtttcgagccgaaccaat 39408780  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    |||||||||||||| ||||| || ||||| | ||||| |||||    
T  39408779 tcttatcgagtcgaatcgagctcggacaggtacgactcgactc 39408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 218
Target Start/End: Original strand, 1840976 - 1841111
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    |||||||| |||||||||| |||||||||| | ||||||  |||||| ||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  1840976 ttcgtgaactttaaacgagccgaactcgagttaaaaaaagggttcgtatcgaactcgagtcgagtttcgagccgaaccaattcttatcgagtcgagtcga 1841075  T
Q  183 gatcagacagattcgacttgactcgactcatttcca 218  Q
    | |||||||| || |  | |||||||||||||||||    
T  1841076 gctcagacaggtttggttcgactcgactcatttcca 1841111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 225
Target Start/End: Original strand, 38523225 - 38523391
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcg 151  Q
    ||||||||| ||||||||||||||| |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||            
T  38523225 cgaactgaacctaacgagccgaaccaaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgaacc-------- 38523316  T
Q  152 agctgaaccaattcttatcgagtcgagt-----cgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
        ||||||||||||||||||||||||     |||| |||||||| ||||  | ||||||||||||||||| ||||||    
T  38523317 ----gaaccaattcttatcgagtcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccagccctag 38523391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 26217590 - 26217423
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| ||||||| |||||||||  |  ||||||| |||||||||| |||||| ||||  ||||||  |||||| | ||||||||| || ||||||||| |    
T  26217590 tgaacctaacgaaccgaaccgagtttctcgtgaactttaaacgagccgaactggagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 26217491  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||||||| |||||||  |||| |||||||  ||||||| |||||||||||||||||||||||    
T  26217490 aaccaattcttattgagtcgaaccgagctcagacaagttcgactcgactcgactcatttccaacccta 26217423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 34857102 - 34856943
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| |||||||||| ||||||||     |||||| ||||||||| || ||||||  |||||  ||||||||||| |  ||||||||| ||||||||    
T  34857102 aacgagctgaaccgaactgttcgtgaac----aacgagccgaactcgaacttaaaaaaatgttcgcttcgaactcgagtcaagtttcgagccgaaccaat 34857007  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    |||||||||||||| ||||  |||||||||||||||| |||||||||||||||||  |||||||    
T  34857006 tcttatcgagtcgaatcgaactcagacagattcgactcgactcgactcatttccagtcctagtt 34856943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 225
Target Start/End: Original strand, 19283558 - 19283725
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    ||||||||| ||| ||||||||  | |||||||| ||||||  ||| ||||||||| | ||||||  |||||| ||||||||||| || ||||||||||     
T  19283558 tgaatctaatgagtcgaaccgagttgttcgtgaactttaaatcagtagaactcgagttaaaaaaag-gttcgtatcgaactcgagtcgagtttcgagcta 19283656  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    ||||||||||||||||||||||||||| ||||| |  ||||| |  |||||||||||||||| ||||||    
T  19283657 aaccaattcttatcgagtcgagtcgagctcagataagttcgattctactcgactcatttccagccctag 19283725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 11136636 - 11136803
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  ||||||| |||||||||  ||| |||||||  ||||||  |||||| | ||||||||| || ||||||||| |    
T  11136636 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgaaccgagctcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 11136735  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||| ||||||||||| ||||| |||| |||||||  ||||||| ||||||||||||||||| |||||    
T  11136736 aacctattcttatcgaatcgagccgagttcagacaagttcgactcgactcgactcatttccagcccta 11136803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 4983938 - 4984072
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  ||||||| |||||||||| |||||||||||  ||||||  |||||| | ||||||||| || ||||| |||||    
T  4983938 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcaagctg 4984037  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagaca 191  Q
    |||||||||||||||||||||| |||| |||||||    
T  4984038 aaccaattcttatcgagtcgagccgagctcagaca 4984072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 39407141 - 39406999
Alignment:
Q  64 aacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaat 163  Q
    ||||||| |||||||||| |||||||| |||||||||| |||||||||||| |||||| |||||   ||||||||||| || ||||||| | ||||||||    
T  39407141 aacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagcttaaaaaaaagttcacttcgaactcgagtcgagtttcgaaccgaaccaat 39407042  T
Q  164 tcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    |||||||||||||| || || || ||||| | ||||| |||||    
T  39407041 tcttatcgagtcgaatcaagctcggacaggtacgactcgactc 39406999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 10493514 - 10493377
Alignment:
Q  84 tcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgag 183  Q
    ||||||| |||||||||| |||||| ||| ||||||||  |||||| ||||||||||| || ||||||||| |||||| ||||||||||||||||         
T  10493514 tcgtgaactttaaacgagccgaacttgagttgaaaaaaaggttcgtttcgaactcgagtcgagtttcgagccgaaccatttcttatcgagtcgagc---- 10493419  T
Q  184 atcagacagattcgacttgactcgactcatttccaaccctagt 226  Q
     |||||||| ||||| | ||||||||||||||||| |||||||    
T  10493418 -tcagacaggttcgattcgactcgactcatttccagccctagt 10493377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 19715921 - 19715797
Alignment:
Q  75 ccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagt 174  Q
    |||||||||||||||| |||||||||| |||||||||| | ||||||  |||||  ||||||||||| || ||||||||| ||||||||| |||||||||    
T  19715921 ccgaactattcgtgaactttaaacgagccgaactcgagtttaaaaaag-gttcgcttcgaactcgagtcgagtttcgagccgaaccaattattatcgagt 19715823  T
Q  175 cgagtcgagatcagacagattcgact 200  Q
    ||| ||||| |||||||  |||||||    
T  19715822 cgaatcgagctcagacaagttcgact 19715797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 20188507 - 20188350
Alignment:
Q  67 gagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattct 166  Q
    |||||||||| |||| |||||||| ||||||||||  ||||| ||| || ||||| |||||||||| ||||||| ||| | ||||| | |||| ||||||    
T  20188507 gagccgaaccaaactgttcgtgaactttaaacgagcggaacttgagttggaaaaaaagttcgtgtcaaactcgatccgagattcgaaccgaacaaattct 20188408  T
Q  167 tatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||  ||||||||||||  |||||||  ||||| | |||| |||||||||||| |||||    
T  20188407 taatgagtcgagtcgaactcagacaagttcgattcgacttgactcatttccagcccta 20188350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 14501398 - 14501486
Alignment:
Q  136 ctcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||| || ||||||||| ||||| ||||||||||||||||| |||| ||||||| |||||||| ||| |||||||||||||||||||    
T  14501398 ctcgagtcgagtttcgagccgaaccgattcttatcgagtcgagccgagctcagacaaattcgactcgacgcgactcatttccaacccta 14501486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 178
Target Start/End: Complemental strand, 31620134 - 31620007
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctg-aaaaaatagttcgtgtcgaactcgagccgggtttc 150  Q
    |||||| || |||||||||||||||||| | ||||||||  |||||||||||||||| ||| || |||||| || ||||||| |||| || ||| ||||     
T  31620134 cgaactaaacctaacgagccgaaccgaattgttcgtgaaccttaaacgagtcgaacttgagttgaaaaaaaaagctcgtgtcaaacttgaaccgagtttt 31620035  T
Q  151 gagctgaaccaattcttatcgagtcgag 178  Q
    |||||||||||| ||||||||| |||||    
T  31620034 gagctgaaccaaatcttatcgaatcgag 31620007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 2675476 - 2675308
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| ||||||| || |||| |||||||| |||||||||||||||||||||||||||||| ||||||| || | ||||| |||       
T  2675476 caaacgaattgaacctaatgagccga-ccaaactgttcgtgaactttaaacgagtcgaactcgagctgaaaaaa-agttcgtatcaagctcgaaccgaag 2675379  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||||| | || |||||||||| ||| |||||||||  | |||||  ||||| | |||||| ||||||||||    
T  2675378 ttcgaaccgagccaattcttaacgaatcgagtcgaacttagacaagttcgattcgactcggctcatttcca 2675308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 206
Target Start/End: Complemental strand, 27195574 - 27195441
Alignment:
Q  73 aaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcga 172  Q
    |||||| || |||||||| |||||||||| |||||||||| |  | |||  |||||| || ||||||||  | ||||||||| |||||||||||||| ||    
T  27195574 aaccgagctgttcgtgaactttaaacgagccgaactcgagttagagaaaaggttcgtttcaaactcgagtagagtttcgagccgaaccaattcttattga 27195475  T
Q  173 gtcgagtcgagatcagacagattcgacttgactc 206  Q
    ||||||||||| |||||||  ||||||| |||||    
T  27195474 gtcgagtcgagctcagacatgttcgactcgactc 27195441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 41782861 - 41782748
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  ||||||| |||||||||| |||||||||||  ||||||  |||||| | ||||||||| || ||||||||| |    
T  41782861 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 41782762  T
Q  157 aaccaattcttatc 170  Q
    ||||||||||||||    
T  41782761 aaccaattcttatc 41782748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 20191198 - 20191288
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactc 138  Q
    |||||||| |||| |||| |||||||||| |||| || ||||| |||||||||| |||||| |||||||||||| || ||||||| |||||    
T  20191198 caaacgaattgaacctaatgagccgaaccaaactgtttgtgaactttaaacgagccgaacttgagctgaaaaaaaagctcgtgtcaaactc 20191288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 28430717 - 28430595
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatag-ttcgtgtcgaactcgagccgggtttcgagct 155  Q
    |||||||||| |||| ||||||  | ||||| || |||||||||| |||||||||  | ||| || || ||||| ||||||||||| || |||| |||||    
T  28430717 tgaatctaacaagccaaaccgagttgttcgttaactttaaacgagccgaactcgaattaaaagaaaaggttcgtatcgaactcgagtcgagttttgagct 28430618  T
Q  156 gaaccaattcttatcgagtcgag 178  Q
    |||| ||||||||||||||||||    
T  28430617 gaactaattcttatcgagtcgag 28430595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 13937226 - 13937313
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagct-gaaaaaatagttcgtgtcgaactcgagccg 144  Q
    |||| |||||||| ||||||||    || ||||| |||||||||| |||||||||||| |||||||| ||| || ||||||||||||||    
T  13937226 tgaacctaacgagtcgaaccgagtggtttgtgaactttaaacgagccgaactcgagctagaaaaaat-gtttgtttcgaactcgagccg 13937313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 18888 - 18707
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||     
T  18888 agcaaccgaactgaacctaatgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgaaccga 18789  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    |||| |||| ||||||||||||||||||||||| |||| ||| |||||||||  | ||||||||||||||||| ||||||||    
T  18788 gttttgagccgaaccaattcttatcgagtcgagccgagctcaaacagattcggttcgactcgactcatttccagccctagtt 18707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 3e-57; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 7957229 - 7957049
Alignment:
Q  49 aaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtt 148  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||| |||    
T  7957229 aaacgaactaaacctaacgagccgaaccgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtgttgaactcgagccgagtt 7957130  T
Q  149 tcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtttc 229  Q
    |||||| ||||||||||||||||||||||| |||| |||||||| ||||  | ||||||||||||||||| ||||| ||||    
T  7957129 tcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcgggtcgactcgactcatttccagccctaatttc 7957049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 18962015 - 18961851
Alignment:
Q  54 aactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgag 153  Q
    ||||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  18962015 aactgaacctagcgagccgaaccgaactgttcgtgaactttaaacgagtcgaactcgggctgaaaaaatagtttgtgtcgaactcgagccgagtttcgag 18961916  T
Q  154 ctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    | ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||||||||||||    
T  18961915 ccgaaccaattcttatcgagtcgagccgagctcaggcaggttcgatttgactcgactcatttcca 18961851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 10346390 - 10346220
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  10346390 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccga 10346291  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttc 216  Q
    ||||||||| ||||||||||||||||| ||||| |||| ||| |||| ||||  | |||| ||||||||||    
T  10346290 gtttcgagccgaaccaattcttatcgaatcgagccgagctcaaacaggttcggttcgacttgactcatttc 10346220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 472987 - 472826
Alignment:
Q  63 taacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaa 162  Q
    |||||||| ||| | |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| || ||||| | |||| | ||    
T  472987 taacgagctgaatcaaactgttcgtgaactttaaacgagtcgaactcgagctgaaaaaagagttcgtgtcgaacttgagtcgagtttcaaactgagcaaa 472888  T
Q  163 ttcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||||||| |||||||||||| ||| ||| ||| || | |||||||||||||| || |||||    
T  472887 ttcttatcaagtcgagtcgagctcatacatatttgattcgactcgactcatttacatcccta 472826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 25181138 - 25181259
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| | |||||||||||    
T  25181138 tgaaactaacgagccgaatcgaactgtttgtgaattttaaacgagtcgaactcgagcttaaaaaagagttcgtgtcgaactcaagctgagtttcgagctg 25181237  T
Q  157 aaccaattcttatcgagtcgag 178  Q
    | | |||||||| |||||||||    
T  25181238 agcaaattcttaacgagtcgag 25181259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 10962386 - 10962556
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    |||||||| |||| |||| |||||||||| |||| |||||||| |||||||||| ||||||  ||||||||||| |||||||||| ||||||| ||  |     
T  10962386 caaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaacttaagctgaaaaaaaagttcgtgtcaaactcgaaccaaga 10962485  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
     |||| | |||||||||||||  || |||||||||| ||||| || ||||| | |||||||||||||||||    
T  10962486 ctcgaaccgaaccaattcttaatgaatcgagtcgagctcagataggttcgattcgactcgactcatttcca 10962556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 225
Target Start/End: Complemental strand, 7436877 - 7436699
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    |||||||||  |||| ||||||||| ||||| |  |  ||||||| |||||||||| |||||||||| ||||||||  |||||| || ||||||||  |     
T  7436877 agcaaacgagttgaacctaacgagctgaaccaagttgctcgtgaactttaaacgagccgaactcgagttgaaaaaag-gttcgtttcaaactcgagtgga 7436779  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||| ||||| | ||||||||| |||| || ||||||    
T  7436778 gtttcgagccgaaccatttcttatcgagtcgagtcgagctcagacaggttcgattcgactcgacttattttcagccctag 7436699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 13311489 - 13311366
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    |||||||| |||||||||| ||||||||||||  |||||  |||||| |||||||||| ||| |||| |||  |||||||||||||||||||||||||||    
T  13311489 ttcgtgaactttaaacgagccgaactcgagctagaaaaaaggttcgtttcgaactcgaaccgagttttgagtcgaaccaattcttatcgagtcgagtcga 13311390  T
Q  183 gatcagacagattcgacttgactc 206  Q
    | ||||||||| |||||| |||||    
T  13311389 gctcagacagactcgactcgactc 13311366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 33109969 - 33109845
Alignment:
Q  87 tgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatc 186  Q
    |||| |||||||||| |||||||||||  ||||||  |||||| | ||||||||| || ||||||||| ||||||||||||||||||||||| |||| ||    
T  33109969 tgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccgaaccaattcttatcgagtcgagccgagctc 33109870  T
Q  187 agacagattcgacttgactcgactc 211  Q
    |||||  ||||||| ||||||||||    
T  33109869 agacaagttcgactcgactcgactc 33109845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 12428191 - 12428089
Alignment:
Q  76 cgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtc 175  Q
    |||||| ||||| || ||||||||||||||||||||||| || ||| ||||||| ||||||||||| || ||||||||| ||| ||||||||||||||||    
T  12428191 cgaactgttcgtaaactttaaacgagtcgaactcgagcttaacaaaaagttcgtatcgaactcgagtcgagtttcgagccgaatcaattcttatcgagtc 12428092  T
Q  176 gag 178  Q
    |||    
T  12428091 gag 12428089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 22295523 - 22295397
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||||||||||||| |||||||  |  |||||||||||||| ||| ||||||||||| | ||||| |||| || ||||||||||| || ||||||||| |    
T  22295523 tgaatctaacgagctgaaccgagttgctcgtgaattttaaatgagccgaactcgagccggaaaaaaagtttgtttcgaactcgagtcgagtttcgagccg 22295424  T
Q  157 aaccaattcttatcgagtcgagtcgag 183  Q
    |||||||||| ||||||| ||| ||||    
T  22295423 aaccaattctaatcgagttgagccgag 22295397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 3082293 - 3082465
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    |||||||||  |||| |||||||| ||||| ||  |  ||||||| || |||||||||||||||||| ||||||||  |||||| |||||||| || ||     
T  3082293 agcaaacgagttgaacctaacgagtcgaactgagttgctcgtgaacttaaaacgagtcgaactcgagttgaaaaaaaggttcgtttcgaactctagtcga 3082392  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    |||||||||  ||||| ||||||| || ||||||| || ||||| || ||||  | ||||| |||||||||||    
T  3082393 gtttcgagcccaaccatttcttattgaatcgagtcaagctcagataggttcggttcgactcaactcatttcca 3082465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 220
Target Start/End: Original strand, 17493306 - 17493468
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||| |||| ||||| |||||| |||||| |||||| ||| |||||| |||||||||||| |||| ||||| ||||||| | | | |||||   |    
T  17493306 tgaacctaatgagctgaaccaaactatccgtgaactttaaatgagccgaacttgagctgaaaaaa-agtttgtgtcaaactcgaactgaggttcgaatcg 17493404  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaac 220  Q
     |||||||||||  | ||||||||||  ||||||| |||||| | |||||||||||||||||||    
T  17493405 taccaattcttaatgtgtcgagtcgaattcagacaaattcgattcgactcgactcatttccaac 17493468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 6998721 - 6998659
Alignment:
Q  50 aacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgag 112  Q
    |||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  6998721 aacgaattgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagtcgaactcgag 6998659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 6998670 - 6998582
Alignment:
Q  130 gtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    |||||||||||| || ||||||||| || | |||||||||||||||||| |||| |||||||| ||||  | |||||||||||||||||    
T  6998670 gtcgaactcgagtcgagtttcgagccgagcaaattcttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 6998582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 27925562 - 27925474
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcga 140  Q
    |||| |||| |||| |||||||||| |||| ||||||||||||||||||| |||||| ||| |||||||| ||||| |||| |||||||    
T  27925562 cgaaatgaacctaatgagccgaaccaaactgttcgtgaattttaaacgagccgaacttgagatgaaaaaaaagttcttgtcaaactcga 27925474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 9463664 - 9463785
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcg 151  Q
    |||||||||||||| ||||||||||||  || |||| || || ||||||| |||||||||||| ||||||  ||| || | |||||||||  | |||||     
T  9463664 cgaactgaatctaaagagccgaaccgagttactcgtaaacttaaaacgagccgaactcgagct-aaaaaaaggtttgttttgaactcgagttgagtttca 9463762  T
Q  152 agctgaaccaattcttatcgagt 174  Q
    ||||||||||||||| |||||||    
T  9463763 agctgaaccaattctaatcgagt 9463785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 4442057 - 4442129
Alignment:
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttcca 218  Q
    ||||||||| |||  ||||||||||||||||||| ||| |||||||| ||||  | |||||||||||||||||    
T  4442057 gtttcgagccgaattaattcttatcgagtcgagttgagctcagacaggttcggttcgactcgactcatttcca 4442129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 6194845 - 6194945
Alignment:
Q  34 taatgtgactcaagcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcg 133  Q
    |||||| | |||||||||| ||||| || ||||||| | |||| |||  ||| | |||||||||||| | |||||||||||| |||||||||| ||||||    
T  6194845 taatgtaattcaagcaaacaaactggatttaacgagtcaaaccaaacggttcataaattttaaacgatttgaactcgagctg-aaaaatagtttgtgtcg 6194943  T
Q  134 aa 135  Q
    ||    
T  6194944 aa 6194945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 5641176 - 5641339
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    ||||||||  ||| |||| ||||| |||| || | |||||||| |||||||||| || ||| ||| || ||||| |||||||||| |||| || | | |     
T  5641176 caaacgaatcgaacctaatgagccaaaccaaattgttcgtgaactttaaacgagccgtacttgagttggaaaaaaagttcgtgtcaaacttgatctgagg 5641275  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactc 211  Q
    ||||| |  ||| ||||||||  ||||||||||||  |||||||  ||||| | ||||||||||    
T  5641276 ttcgaaccaaacaaattcttaatgagtcgagtcgaactcagacaagttcgattcgactcgactc 5641339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 183
Target Start/End: Original strand, 8291385 - 8291514
Alignment:
Q  54 aactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgag 153  Q
    ||||||| |||  |||| ||||||| ||||||||||  ||||| ||||||||  |||| |||||||| || |||||  |||| | |||  | ||||||||    
T  8291385 aactgaacctattgagctgaaccgagctattcgtgagctttaatcgagtcgagttcgaactgaaaaattatttcgtaacgaatttgagttgagtttcgag 8291484  T
Q  154 ctgaaccaattcttatcgagtcgagtcgag 183  Q
    | |||| || | ||||||||||||| ||||    
T  8291485 ccgaactaaattttatcgagtcgagccgag 8291514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 224
Target Start/End: Complemental strand, 11161230 - 11161078
Alignment:
Q  72 gaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcg 171  Q
    |||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  11161230 gaaccgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtggcgaactcgagccgaggttcgagccgaaccaattcttatcg 11161131  T
Q  172 agtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||| ||| |||| |||| ||| | ||  | |||||||||||||| ||||||||    
T  11161130 agtggagccgagctcaggcaggtccggttcgactcgactcatttgcaacccta 11161078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 198
Target Start/End: Complemental strand, 22563436 - 22563284
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||||| || |||| ||||||| |||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||     
T  22563436 agcaaacaaattgaacctaacgaaccgaaccgaactgttcgtgaaccttaaacgagtcgaactcgagctgaaaaaagagttcgtgttgaactcgagtcga 22563337  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcga 198  Q
    ||||||||| || | || ||||||||||| ||| |||| ||||||||||||||    
T  22563336 gtttcgagccgagcaaaatcttatcgagttgagccgagctcagacagattcga 22563284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 22930858 - 22930978
Alignment:
Q  92 tttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagaca 191  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||     |||||||    
T  22930858 tttaaacgagt-gaactcgagctgaaaaaatagtttgtgtcgaactcgagccgagtttcgagccgaaccaattcttatcgagtcgagt-----tcagaca 22930951  T
Q  192 gattcgacttgactcgactcatttcca 218  Q
    | ||||  | |||||||||||||||||    
T  22930952 ggttcggttcgactcgactcatttcca 22930978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 220
Target Start/End: Original strand, 33280604 - 33280774
Alignment:
Q  48 caaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggt 147  Q
    ||||||||||||| |||| |||||||||| || | |||||||| |||||| |||||||||| |||||||||||  |||||||||| ||||||| | | |     
T  33280604 caaacgaactgaacctaatgagccgaaccaaattgttcgtgaactttaaatgagtcgaacttgagctgaaaaa--agttcgtgtcaaactcgaactgagg 33280701  T
Q  148 ttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaac 220  Q
    ||| | |||| |||||||| | |||||||||||||  |||||||| ||||| | |||||||||||||||||||    
T  33280702 ttctaactgatccaattctaaacgagtcgagtcgaactcagacaggttcgattcgactcgactcatttccaac 33280774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 43967049 - 43966900
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| |||||||||||||||||  |  ||||||| |||||||||| |||||||||||  |||||| | ||||| | ||||||||| || ||||||||| |    
T  43967049 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaaattcgttttgaactcgagtcgagtttcgagccg 43966950  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactc 206  Q
    |||||||||||||||||||||| |||| |||||||  ||||||| |||||    
T  43966949 aaccaattcttatcgagtcgagccgagttcagacaagttcgactcgactc 43966900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 12377859 - 12377745
Alignment:
Q  86 gtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagat 185  Q
    ||||| ||||||||||  ||||||||| | |||||||||||||| ||||||||||| || ||||||||||||||  ||||||||||| |||||||||| |    
T  12377859 gtgaactttaaacgagatgaactcgagttaaaaaaatagttcgtttcgaactcgagtcgagtttcgagctgaacacattcttatcgaatcgagtcgagtt 12377760  T
Q  186 cagacagattcgact 200  Q
    ||||||| |||||||    
T  12377759 cagacaggttcgact 12377745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 9413263 - 9413404
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    |||||||| |||||| ||| |||||| ||||| ||||||  ||||||||||||||| || || ||||||||| |||||| ||||||||||||||||||||    
T  9413263 ttcgtgaactttaaatgagccgaacttgagctaaaaaaaaggttcgtgtcgaactcaagtcgagtttcgagccgaaccatttcttatcgagtcgagtcga 9413362  T
Q  183 gatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    | |||||||  |||   | ||||||||||||||||| |||||    
T  9413363 gctcagacaagttcagttcgactcgactcatttccagcccta 9413404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 39477558 - 39477420
Alignment:
Q  83 ttcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcga 182  Q
    |||||||| ||||||| || ||||||||||||  |||||| |||||| ||||| |||||||  |||||||   |||||||||||||||||||||||||||    
T  39477558 ttcgtgaactttaaacaagccgaactcgagctagaaaaat-gttcgtttcgaattcgagccaagtttcgaatcgaaccaattcttatcgagtcgagtcga 39477460  T
Q  183 gatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    | ||||||||||||     ||||||||||||||||| ||||||||    
T  39477459 gctcagacagattc-----gactcgactcatttccagccctagtt 39477420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 183
Target Start/End: Complemental strand, 23180921 - 23180790
Alignment:
Q  52 cgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcg 151  Q
    |||| |||| |||| |||||||||| |||| ||||| || ||||||||||||||||| ||| |||||||| ||||| |||| ||||||| ||| | ||||    
T  23180921 cgaaatgaacctaatgagccgaaccaaactgttcgtaaactttaaacgagtcgaacttgagatgaaaaaaaagttcctgtcaaactcgaaccgaggttcg 23180822  T
Q  152 agctgaaccaattcttatcgagtcgagtcgag 183  Q
    | | |||| |||||||| ||||||||||||||    
T  23180821 aaccgaacaaattcttaacgagtcgagtcgag 23180790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 1091236 - 1091164
Alignment:
Q  67 gagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcga 140  Q
    ||||||||| ||||| |||||||| |||||||||||||||||| | || |||||| ||||||||||||||||||    
T  1091236 gagccgaactgaactgttcgtgaactttaaacgagtcgaactcaaact-aaaaaagagttcgtgtcgaactcga 1091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 34515683 - 34515554
Alignment:
Q  96 aacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagatt 195  Q
    |||||| |||||| |||||||||||| |||||||||| ||||||| ||  |  |||| | || ||||||||||  || |||| ||||| ||||| || ||    
T  34515683 aacgagccgaacttgagctgaaaaaaaagttcgtgtcaaactcgaaccaaggctcgaaccgagccaattcttaatgaatcgaatcgagctcagataggtt 34515584  T
Q  196 cgacttgactcgactcatttccaaccctag 225  Q
    ||| | ||||||||||||||||| ||||||    
T  34515583 cgattcgactcgactcatttccagccctag 34515554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 15211875 - 15211999
Alignment:
Q  54 aactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgag 153  Q
    ||||||| ||||||||||||| |||  | || ||||| |  || ||||||||  ||||||| |||||| |||| ||  ||||||||||||| ||||||||    
T  15211875 aactgaacctaacgagccgaatcgagttgttagtgaactcaaaccgagtcgagttcgagctaaaaaaaaagtttgtaacgaactcgagccgagtttcgag 15211974  T
Q  154 ctgaaccaattcttatcgagtcgag 178  Q
    || |||||| |||||| ||||||||    
T  15211975 ctaaaccaaatcttatggagtcgag 15211999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 227
Target Start/End: Original strand, 25731827 - 25731992
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| ||| |||||||||| ||  | |||||||| |||||| ||| ||||||| || | ||||||  ||| |  ||||||| ||| ||  |||||||| |    
T  25731827 tgaacctaccgagccgaactgagtttttcgtgaactttaaatgagccgaactcaagttaaaaaaagggtttgcatcgaacttgagtcgactttcgagccg 25731926  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctagtt 227  Q
    ||||||||||||||||||||||      ||||||| |||||  | ||||||||||||||||||| ||||||    
T  25731927 aaccaattcttatcgagtcgagc-----tcagacaaattcggttcgactcgactcatttccaacactagtt 25731992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 27189629 - 27189694
Alignment:
Q  160 caattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaaccctag 225  Q
    ||||||||| |||||||||||||| |||||||  ||||| | ||||||||||||||||| ||||||    
T  27189629 caattcttaacgagtcgagtcgagctcagacaagttcgattcgactcgactcatttccagccctag 27189694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 10750256 - 10750320
Alignment:
Q  68 agccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtc 132  Q
    ||||||||| ||||||||||||| |||||| ||| || ||||||||| |||||| ||||||||||    
T  10750256 agccgaaccaaactattcgtgaactttaaaagagccgtactcgagctaaaaaaaaagttcgtgtc 10750320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 17865720 - 17865764
Alignment:
Q  130 gtcgaactcgagccgggtttcgagctgaaccaattcttatcgagt 174  Q
    |||||||||||| || |||||||||||||||||||||||||||||    
T  17865720 gtcgaactcgagtcgagtttcgagctgaaccaattcttatcgagt 17865764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 32740356 - 32740279
Alignment:
Q  147 tttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||||||||||| ||||||||| ||||||| ||||  ||||| | |||||||| || ||||||||||| || |||||    
T  32740356 tttcgagctgaactaattcttattgagtcgaatcgaactcagataaattcgactcgattcgactcattttcagcccta 32740279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 9133525 - 9133438
Alignment:
Q  92 tttaaacgagtcgaactcgagctgaaaaaatag-ttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgag 178  Q
    ||||||||||||||||||||| | |||||| || ||||  || || ||||| || |||| || |||||||| ||||||||||||||||    
T  9133525 tttaaacgagtcgaactcgagtttaaaaaaaaggttcgattcaaattcgagtcgagttttgaactgaaccatttcttatcgagtcgag 9133438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 32554088 - 32554192
Alignment:
Q  79 actattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgag 178  Q
    |||||||||||| |||||||||| |||| || | || | |||| ||||| | || ||||||||  | |||||||  | || |||| ||||||||||||||    
T  32554088 actattcgtgaaatttaaacgagacgaattcaaacttataaaagagttcatttcaaactcgagttgagtttcgaattaaatcaatccttatcgagtcgag 32554187  T
Q  179 tcgag 183  Q
    |||||    
T  32554188 tcgag 32554192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 6366 - 6533
Alignment:
Q  46 agcaaacgaactgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgg 145  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||| |||| |||||           ||||||||||||||||||||||||||||||||     
T  6366 agcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttagacgag-----------ctgaaaaaatagttcgtgtcgaactcgagccga 6454  T
Q  146 gtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    ||||| | | |||||||||||||||||||||||||||| |||| ||| ||| | | |||||||||||||| || |||||    
T  6455 gtttcaacccgaaccaattcttatcgagtcgagtcgagctcaggcaggttcaattcgactcgactcattttcagcccta 6533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 16658 - 16492
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| | |||| ||||  ||||||  ||| || || |||||||| || ||||||||| |    
T  16658 tgaacctaaccagccgaactgaactattcgtgaattttaaacgagccaaacttgagcctaaaaaag-gtttgtttcaaactcgagtcgagtttcgagccg 16560  T
Q  157 aaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttccaacccta 224  Q
    |||  ||| || | |||| |||||||| |||||||| ||||| | ||||||||||||||||| |||||    
T  16559 aacatatttttgttgagttgagtcgagctcagacaggttcgattcgactcgactcatttccagcccta 16492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 26600 - 26499
Alignment:
Q  117 aaaaatagttcgtgtcgaactcgagccgggtttcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcatttc 216  Q
    ||||| ||||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |  |||||||| |||||    
T  26600 aaaaaaagttcgtttcgaactcgagtcgaatttcgagctgaaccaattcttatcgagtcgagtcgagctcaaacaggttcgattcaactcgactgatttc 26501  T
Q  217 ca 218  Q
    ||    
T  26500 ca 26499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 1386 - 1507
Alignment:
Q  57 tgaatctaacgagccgaaccgaactattcgtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagctg 156  Q
    |||| ||||||||||||||| |  | |||||||| |||||||||| ||||||| || |  | |||  |||||| || |||||||| || ||||||||| |    
T  1386 tgaacctaacgagccgaaccaagttgttcgtgaactttaaacgagccgaactcaagttagagaaaaggttcgtttcaaactcgagtcgagtttcgagccg 1485  T
Q  157 aaccaattcttatcgagtcgag 178  Q
    ||||||||||||||||||||||    
T  1486 aaccaattcttatcgagtcgag 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 33493 - 33559
Alignment:
Q  149 tcgagctgaaccaattcttatcgagtcgagtcgagatcagacagattcgacttgactcgactcattt 215  Q
    |||||| |||||||||||||| |||| |||||||| |||||||| ||||| ||||||||||||||||    
T  33493 tcgagccgaaccaattcttattgagttgagtcgagctcagacagtttcgatttgactcgactcattt 33559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 4816 - 4748
Alignment:
Q  86 gtgaattttaaacgagtcgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgggtttcgagc 154  Q
    ||||| |||||||||| |||||| |||   ||||||| |||||| ||||||||||| || |||||||||    
T  4816 gtgaactttaaacgagccgaacttgagtcaaaaaaatggttcgtatcgaactcgagtcgagtttcgagc 4748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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