View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9592_low_20 (Length: 327)
Name: NF9592_low_20
Description: NF9592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9592_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 36467036 - 36467347
Alignment:
| Q |
1 |
tagttaagagagagtaaagggaggtcattttgagcgaaggaagaaatgacagagctccaagtagtggcggatttgtgaggagaatcgtggaagatttgaa |
100 |
Q |
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| T |
36467036 |
tagttaagagagagtaaagggaggtcattttgagcgaaggaagaaatgacagagctccaagtagtggcggatttgtgaggagaatcgtggaagatttgaa |
36467135 |
T |
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| Q |
101 |
gggaggaataagggagatgggttttggagtagaagttgatgaggtgatgagaaagaagaggaatagtttgtaaccctaatttgatgatatgagcgtggag |
200 |
Q |
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| T |
36467136 |
gggaggaataagggagatgggttttggagtagaagttgatgaggtgatgagaaagaagaggaatagtttgtaaccctaatttgatgatatgagcgtggag |
36467235 |
T |
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| Q |
201 |
ttgaagacctttggggagggagcgagagaatgttaaagagagaagcgtgttgcatatgtttctgtataaaggttgttggttgaagctgtggggaagttgg |
300 |
Q |
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| T |
36467236 |
ttgaagacctttggggagggagcgagaaaatgttaaagagagaagcgtgttgcataagtttctgtataaaggttgttggttgaagctgtggggaagttgg |
36467335 |
T |
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| Q |
301 |
agttgatgttga |
312 |
Q |
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|||||||||||| |
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| T |
36467336 |
agttgatgttga |
36467347 |
T |
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