View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9592_low_32 (Length: 250)
Name: NF9592_low_32
Description: NF9592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9592_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 37200625 - 37200386
Alignment:
| Q |
1 |
cattgagttgaatataacaaatggtttttgaagagaagaagagaaaagtgaagtttttgtgttagtgttaatgaataaattagtgtaagaaagaagataa |
100 |
Q |
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| T |
37200625 |
cattgagttgaatataacaaatggtttttgaagagaagaagagaaaattgaagtttttgtgttagtgttaatgaataaattagtgtaagaaagaagataa |
37200526 |
T |
|
| Q |
101 |
gacaatattttaagcatgtgtgtaagaggttgctaatttccgcgtagtgttagtgttgtcgtcatgacatgaacagacattcatgttggcaacttgacat |
200 |
Q |
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| T |
37200525 |
gacaatattttaagcatgtgtgtaagaggttgctaatttccgcgtagtgttagtgttgtcgtcatgacatgaacagacattcatgttggcaacttgacat |
37200426 |
T |
|
| Q |
201 |
gttggtgtgaaaagggacccacacatccactttgcctttg |
240 |
Q |
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| T |
37200425 |
gttggtgtgaaaagggacccacacatccactttgcctttg |
37200386 |
T |
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