View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9592_low_47 (Length: 238)

Name: NF9592_low_47
Description: NF9592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9592_low_47
NF9592_low_47
[»] chr5 (23 HSPs)
chr5 (12-174)||(13956964-13957125)
chr5 (12-102)||(6459741-6459831)
chr5 (19-174)||(32383795-32383950)
chr5 (20-164)||(6273170-6273314)
chr5 (36-119)||(35456565-35456648)
chr5 (30-119)||(14351900-14351989)
chr5 (16-83)||(38040661-38040728)
chr5 (17-83)||(14635384-14635450)
chr5 (17-119)||(18942288-18942390)
chr5 (18-83)||(36745865-36745930)
chr5 (18-90)||(23015073-23015145)
chr5 (34-174)||(33112114-33112253)
chr5 (16-83)||(35758073-35758140)
chr5 (17-83)||(3752493-3752559)
chr5 (17-83)||(8761092-8761158)
chr5 (23-119)||(17644168-17644264)
chr5 (17-101)||(29823296-29823380)
chr5 (20-83)||(40143946-40144009)
chr5 (40-80)||(26166211-26166251)
chr5 (30-102)||(33224921-33224993)
chr5 (17-83)||(27194770-27194836)
chr5 (18-100)||(43581663-43581745)
chr5 (53-102)||(28015002-28015051)
[»] chr1 (43 HSPs)
chr1 (12-174)||(962402-962564)
chr1 (12-174)||(24638736-24638895)
chr1 (16-115)||(3252264-3252363)
chr1 (17-166)||(3014087-3014236)
chr1 (18-174)||(3794185-3794341)
chr1 (33-119)||(32364176-32364262)
chr1 (17-115)||(44410751-44410849)
chr1 (17-114)||(33690198-33690295)
chr1 (12-99)||(18032321-18032408)
chr1 (19-102)||(20726024-20726107)
chr1 (20-102)||(46545422-46545504)
chr1 (17-83)||(42866317-42866383)
chr1 (19-102)||(49241683-49241766)
chr1 (17-83)||(28234838-28234904)
chr1 (17-83)||(44257809-44257875)
chr1 (19-83)||(3355441-3355505)
chr1 (17-83)||(24984166-24984232)
chr1 (54-119)||(45484224-45484289)
chr1 (36-84)||(4225077-4225125)
chr1 (20-88)||(11191403-11191471)
chr1 (12-84)||(37034875-37034947)
chr1 (22-102)||(40960191-40960271)
chr1 (47-103)||(52585217-52585273)
chr1 (19-102)||(28282017-28282100)
chr1 (51-102)||(45774829-45774880)
chr1 (19-117)||(50323371-50323469)
chr1 (16-81)||(51727094-51727159)
chr1 (19-103)||(50358944-50359028)
chr1 (38-93)||(4331946-4332001)
chr1 (36-83)||(46535272-46535319)
chr1 (17-102)||(27415209-27415294)
chr1 (37-84)||(16914487-16914534)
chr1 (36-78)||(12792720-12792762)
chr1 (20-102)||(17857923-17858005)
chr1 (60-102)||(17950363-17950405)
chr1 (21-103)||(45193177-45193259)
chr1 (36-78)||(48303206-48303248)
chr1 (19-92)||(19554183-19554256)
chr1 (47-84)||(37701535-37701572)
chr1 (11-56)||(41983797-41983842)
chr1 (19-75)||(20117850-20117906)
chr1 (38-94)||(30789133-30789189)
chr1 (51-91)||(49528962-49529002)
[»] chr3 (34 HSPs)
chr3 (12-172)||(35054618-35054778)
chr3 (16-115)||(42217127-42217226)
chr3 (20-174)||(42907811-42907964)
chr3 (17-171)||(3046483-3046635)
chr3 (17-119)||(51537151-51537253)
chr3 (17-173)||(29727776-29727932)
chr3 (22-101)||(15100648-15100727)
chr3 (17-101)||(53351210-53351294)
chr3 (12-115)||(50007260-50007363)
chr3 (17-84)||(6101917-6101984)
chr3 (17-83)||(30465084-30465150)
chr3 (13-115)||(41462320-41462422)
chr3 (17-83)||(55258082-55258148)
chr3 (17-83)||(29025298-29025364)
chr3 (17-78)||(37599876-37599937)
chr3 (19-83)||(2849263-2849327)
chr3 (12-104)||(11575028-11575120)
chr3 (17-83)||(23241860-23241926)
chr3 (17-83)||(39850734-39850800)
chr3 (17-73)||(33634922-33634978)
chr3 (44-99)||(11018770-11018825)
chr3 (19-78)||(33987222-33987281)
chr3 (36-83)||(44832461-44832508)
chr3 (17-101)||(53724100-53724176)
chr3 (138-174)||(40918341-40918377)
chr3 (36-84)||(45158518-45158566)
chr3 (36-78)||(26725602-26725644)
chr3 (18-88)||(45104104-45104174)
chr3 (32-78)||(47715678-47715724)
chr3 (36-118)||(52404313-52404395)
chr3 (20-101)||(6739451-6739532)
chr3 (53-118)||(21635324-21635389)
chr3 (53-98)||(27227221-27227266)
chr3 (44-100)||(3752908-3752964)
[»] chr8 (34 HSPs)
chr8 (12-174)||(32493092-32493254)
chr8 (17-174)||(38712130-38712287)
chr8 (17-119)||(28761643-28761745)
chr8 (19-86)||(31893201-31893268)
chr8 (17-83)||(42063501-42063567)
chr8 (17-102)||(6545722-6545807)
chr8 (20-91)||(597276-597346)
chr8 (19-102)||(29867769-29867852)
chr8 (16-83)||(41726356-41726423)
chr8 (17-83)||(19726711-19726777)
chr8 (17-83)||(40485551-40485617)
chr8 (20-102)||(45219507-45219589)
chr8 (19-86)||(20821791-20821858)
chr8 (16-83)||(30360493-30360560)
chr8 (19-102)||(36823421-36823504)
chr8 (36-118)||(39375172-39375254)
chr8 (36-101)||(8014901-8014966)
chr8 (36-84)||(18656629-18656677)
chr8 (17-68)||(26403637-26403688)
chr8 (17-84)||(36833943-36834010)
chr8 (38-84)||(4455352-4455398)
chr8 (17-83)||(13487148-13487214)
chr8 (30-100)||(29190616-29190686)
chr8 (25-98)||(39533909-39533982)
chr8 (36-84)||(44056499-44056547)
chr8 (36-83)||(5970001-5970048)
chr8 (36-83)||(36658565-36658612)
chr8 (17-83)||(31008533-31008599)
chr8 (19-92)||(11031071-11031144)
chr8 (18-75)||(14910135-14910192)
chr8 (19-75)||(3655898-3655954)
chr8 (44-89)||(11922623-11922668)
chr8 (36-80)||(12639359-12639403)
chr8 (19-91)||(27845913-27845985)
[»] chr4 (29 HSPs)
chr4 (16-115)||(8132829-8132928)
chr4 (17-119)||(4414454-4414556)
chr4 (16-112)||(6354939-6355035)
chr4 (11-114)||(19916398-19916501)
chr4 (18-101)||(54822087-54822170)
chr4 (17-119)||(43245678-43245780)
chr4 (12-105)||(44352121-44352214)
chr4 (17-84)||(1936504-1936571)
chr4 (17-84)||(25232668-25232735)
chr4 (16-88)||(38519325-38519397)
chr4 (22-88)||(2039126-2039192)
chr4 (20-102)||(293529-293611)
chr4 (34-100)||(7362176-7362242)
chr4 (12-118)||(12704619-12704725)
chr4 (33-102)||(13428758-13428827)
chr4 (17-118)||(55675459-55675560)
chr4 (19-83)||(11792425-11792489)
chr4 (20-100)||(26203658-26203738)
chr4 (19-78)||(23611540-23611599)
chr4 (36-83)||(7648080-7648127)
chr4 (43-102)||(18707466-18707525)
chr4 (23-102)||(34856052-34856131)
chr4 (17-101)||(24394112-24394196)
chr4 (13-105)||(29695408-29695500)
chr4 (17-88)||(2859458-2859529)
chr4 (36-83)||(55497511-55497558)
chr4 (137-171)||(8132459-8132493)
chr4 (25-78)||(19281561-19281614)
chr4 (138-174)||(7362279-7362315)
[»] chr7 (32 HSPs)
chr7 (17-102)||(10992695-10992780)
chr7 (17-174)||(34191810-34191967)
chr7 (20-119)||(46170683-46170782)
chr7 (24-102)||(34259253-34259331)
chr7 (25-113)||(33610637-33610725)
chr7 (16-102)||(5418935-5419017)
chr7 (17-119)||(31813527-31813629)
chr7 (17-101)||(9822558-9822642)
chr7 (17-101)||(10724483-10724567)
chr7 (24-102)||(25069344-25069422)
chr7 (16-101)||(45269430-45269515)
chr7 (17-83)||(11734240-11734306)
chr7 (33-115)||(17833720-17833802)
chr7 (17-83)||(29983274-29983340)
chr7 (17-83)||(36099686-36099752)
chr7 (17-83)||(44605930-44605996)
chr7 (20-88)||(1582197-1582265)
chr7 (19-83)||(36858174-36858238)
chr7 (11-84)||(16217002-16217075)
chr7 (36-84)||(10198365-10198413)
chr7 (19-102)||(16560960-16561043)
chr7 (19-102)||(16604619-16604702)
chr7 (17-80)||(24096721-24096784)
chr7 (36-83)||(47423503-47423550)
chr7 (40-102)||(16198688-16198750)
chr7 (44-102)||(46004155-46004212)
chr7 (23-75)||(20623194-20623246)
chr7 (33-101)||(25830142-25830210)
chr7 (38-102)||(31958613-31958677)
chr7 (36-99)||(45498889-45498951)
chr7 (38-117)||(49032364-49032443)
chr7 (17-89)||(8419959-8420031)
[»] chr6 (16 HSPs)
chr6 (17-174)||(23595730-23595887)
chr6 (17-101)||(6817329-6817413)
chr6 (17-101)||(30426357-30426441)
chr6 (36-119)||(29419731-29419813)
chr6 (17-83)||(30269632-30269698)
chr6 (17-83)||(21289589-21289655)
chr6 (38-100)||(735096-735158)
chr6 (18-80)||(8464321-8464383)
chr6 (17-83)||(24068195-24068261)
chr6 (17-84)||(11465360-11465427)
chr6 (36-102)||(34779909-34779975)
chr6 (20-102)||(35166056-35166138)
chr6 (36-75)||(22351258-22351297)
chr6 (17-84)||(31513370-31513437)
chr6 (44-89)||(4455848-4455893)
chr6 (47-115)||(21528807-21528875)
[»] chr2 (35 HSPs)
chr2 (17-174)||(6065418-6065575)
chr2 (22-119)||(16106677-16106774)
chr2 (17-102)||(10810537-10810622)
chr2 (17-119)||(21800645-21800747)
chr2 (17-102)||(12365512-12365597)
chr2 (17-118)||(35305259-35305360)
chr2 (17-101)||(19881978-19882062)
chr2 (16-83)||(39678342-39678409)
chr2 (17-83)||(7153476-7153541)
chr2 (12-90)||(16457739-16457817)
chr2 (17-83)||(23293184-23293250)
chr2 (19-117)||(37484444-37484542)
chr2 (17-83)||(24128792-24128858)
chr2 (33-102)||(26606586-26606655)
chr2 (17-101)||(23251008-23251092)
chr2 (17-101)||(32878694-32878778)
chr2 (38-102)||(43869924-43869988)
chr2 (17-75)||(17513059-17513117)
chr2 (18-84)||(22315188-22315254)
chr2 (19-84)||(3988746-3988811)
chr2 (38-115)||(37032776-37032853)
chr2 (36-83)||(14885349-14885396)
chr2 (36-83)||(29523889-29523936)
chr2 (36-83)||(31900463-31900510)
chr2 (36-83)||(37314940-37314987)
chr2 (36-83)||(39061927-39061974)
chr2 (20-102)||(24934880-24934962)
chr2 (20-102)||(25683572-25683654)
chr2 (19-84)||(37254831-37254896)
chr2 (30-102)||(20907123-20907195)
chr2 (53-100)||(29781491-29781538)
chr2 (30-73)||(30963007-30963050)
chr2 (38-101)||(40404371-40404434)
chr2 (48-102)||(7399184-7399238)
chr2 (137-174)||(29781575-29781612)
[»] scaffold0131 (1 HSPs)
scaffold0131 (20-102)||(7852-7934)
[»] scaffold0043 (1 HSPs)
scaffold0043 (13-105)||(64380-64472)
[»] scaffold0116 (1 HSPs)
scaffold0116 (16-84)||(7877-7945)
[»] scaffold0070 (1 HSPs)
scaffold0070 (17-83)||(12760-12826)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-83)||(51948-52014)
[»] scaffold0712 (1 HSPs)
scaffold0712 (33-174)||(4835-4976)
[»] scaffold0709 (1 HSPs)
scaffold0709 (33-174)||(4855-4996)
[»] scaffold0242 (1 HSPs)
scaffold0242 (17-80)||(17853-17916)
[»] scaffold0231 (1 HSPs)
scaffold0231 (17-75)||(11039-11097)
[»] scaffold0045 (1 HSPs)
scaffold0045 (47-103)||(29495-29551)


Alignment Details
Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 12 - 174
Target Start/End: Original strand, 13956964 - 13957125
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgact 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13956964 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgataagttgact 13957063  T
Q  112 cggtcttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    |||||||||||||||        |||||||||| |||||||||||||||||||||||||||||    
T  13957064 cggtcttacgtttaa-ttttttgatgtatttaactagattaaatcggattgaaccgatgactc 13957125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 6459741 - 6459831
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  6459741 gcatgggtactgggtcaatgagttaatggtcgaaccactgggtcactggttgaaccgcatgactgaatcggattaaaccagataactcggt 6459831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 32383950 - 32383795
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctt 118  Q
    |||||||||| |  ||||||| | ||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||||     
T  32383950 tactgggtcactaggttaatgattgaaccactgtgtcattggttgaaccgcatgactgaattggattaaaccgaataactcggtaagatgacccggtctc 32383851  T
Q  119 acgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    | | ||||        | ||||||||| |||||||||| |||||||||||||||||    
T  32383850 aagattaaatttttataggtatttaatcagattaaatcagattgaaccgatgactc 32383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 6273170 - 6273314
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||| | || |||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||||||||||||| || |||||||| ||||    
T  6273170 actgggttattgggttaatggtcgaaccactgagtcaatggtcgaaccgtatgactgaaccggatcaaaccgaataactcggttagatgactcggcctta 6273269  T
Q  120 cgtttaannnnnnnnatgtatttaattagattaaatcggattgaa 164  Q
     | ||||        ||||||| ||  ||||||||||||||||||    
T  6273270 agattaaatttttatatgtattgaaccagattaaatcggattgaa 6273314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 35456565 - 35456648
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |  ||||| |||||||    
T  35456565 aatggtcgaaccactgagtcactggttgaaccgcatgactgaatcggattaaaccggataactcggttaaatgacttggtctta 35456648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 14351989 - 14351900
Alignment:
Q  30 tgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||| |  |||| ||||||||    
T  14351989 tgagttaatggtcgaaccactgagtcattagttgaaccgcatgactgaatcggattaaaccggataactcggttatatgacccggtctta 14351900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 38040661 - 38040728
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  38040661 aggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 38040728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 14635384 - 14635450
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  14635384 ggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccgga 14635450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 18942288 - 18942390
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    ||||| |||||| || || ||||||||||||||||  | ||||||||||||||||||||||| ||||||||| || ||||||| || |  ||||||||||    
T  18942288 ggtaccgggtcactgggtcaatggtcgaaccactggatgactggttgaaccgcatgactgaatcggattaaatcggataactcagttaaatgactcggtc 18942387  T
Q  117 tta 119  Q
    |||    
T  18942388 tta 18942390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 36745930 - 36745865
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  36745930 gtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 36745865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 23015073 - 23015145
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaacc 90  Q
    ||||||||||| ||||| | ||||||||||| || |||| |||||||||||||||||||||||| ||||||||    
T  23015073 gtactgggtcactgagtcattggtcgaaccattgggtcattggttgaaccgcatgactgaaccgtattaaacc 23015145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 33112253 - 33112114
Alignment:
Q  34 ttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtcttacgtttaannnnnnn 133  Q
    |||||| |||||| ||||||||| || |||||| |||||||||||| ||||||||||| |||||||||| || |||||| || ||| | ||||           
T  33112253 ttaatgatcgaactactgagtcattgattgaactgcatgactgaactggattaaaccgtataactcggttagatgactctgt-ttaggattaactttttt 33112155  T
Q  134 natgtatttaattagattaaatcggattgaaccgatgactc 174  Q
     | |||||||| || |||||||||||||||| |||||||||    
T  33112154 taagtatttaactacattaaatcggattgaatcgatgactc 33112114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 35758073 - 35758140
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||| || || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  35758073 aggtactgggtcagtgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 35758140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 3752493 - 3752559
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || |||||||||| || ||||||| |||| |||||||||||||||||||||    
T  3752493 ggtactgggtcaatgggtcaatggtcgaagcagtgagtcattggtcgaaccgcatgactgaaccgga 3752559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 8761158 - 8761092
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||  || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  8761158 ggtactgggtcaataggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 8761092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 17644264 - 17644168
Alignment:
Q  23 gggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    |||||| || || ||||||||||||||||  ||| |||| ||||| |||||||||| ||||||||| || |||||||||| |  |||||||||||||    
T  17644264 gggtcactgggtcaatggtcgaaccactggatcaatggtcgaaccacatgactgaatcggattaaatcggataactcggttaaatgactcggtctta 17644168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 29823296 - 29823380
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||||||| |  || ||||||||||||| ||| ||| || | ||||||||| ||||||||||||||||||| |||||||||    
T  29823296 ggtactgggtcactaggtcaatggtcgaaccagtgaatcattgatcgaaccgcataactgaaccggattaaaccggataactcgg 29823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 40143946 - 40144009
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||| ||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  40143946 actgagtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 40144009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 26166251 - 26166211
Alignment:
Q  40 gtcgaaccactgagtcactggttgaaccgcatgactgaacc 80  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  26166251 gtcgaaccactgagtcattggtcgaaccgcatgactgaacc 26166211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 33224993 - 33224921
Alignment:
Q  30 tgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||| ||||||||||||||||  ||| |||||||||||||||||| |  ||| || |||| |||||||||||    
T  33224993 tgagtcaatggtcgaaccactggatcattggttgaaccgcatgactaactcggtttgaaccaaataactcggt 33224921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 27194836 - 27194770
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||| |||| || ||| || ||||||||| |||| |||| ||||| |||||||||||||||    
T  27194836 ggtactgggttaatgggtcaatagttgaaccactgtgtcattggtcgaaccacatgactgaaccgga 27194770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 43581745 - 43581663
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcg 100  Q
    |||||| ||||||| || | |||| |||||||||| ||| | || |||||||||||||||||| |||| || || ||||||||    
T  43581745 gtactgagtcaatgggtcattggttgaaccactgaatcattagtcgaaccgcatgactgaaccagattgaatcgtataactcg 43581663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 28015002 - 28015051
Alignment:
Q  53 gtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||| |||||||||||||||||||| |||| ||||||| || |||||||    
T  28015002 gtcacgggttgaaccgcatgactgaatcggactaaaccggatgactcggt 28015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 962564 - 962402
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgact 111  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  962564 gcataggtactaggtcaataagttaatggtcgaaccactgagtcactggttgaaccacatgactgaaccggattaaaccgaataactcggtaagttgact 962465  T
Q  112 cggtcttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
     ||||||||||||||        |||||||||| |||||||||||||||||||||||||||||    
T  962464 tggtcttacgtttaatttttgtgatgtatttaactagattaaatcggattgaaccgatgactc 962402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 174
Target Start/End: Original strand, 24638736 - 24638895
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgact 111  Q
    |||| |||| ||||||| |||||||||||||||||   || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24638736 gcatgggtagtgggtcagtgagttaatggtcgaac---tgggtcactggttgaaccgcatgactgaactggattaaaccgaataactcggtaagttgact 24638832  T
Q  112 cggtcttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    |||||||||| ||||        |||||||||| |||||||||| ||||||||||||||||||    
T  24638833 cggtcttacgattaaatttttatatgtatttaactagattaaataggattgaaccgatgactc 24638895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 3252264 - 3252363
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggt 115  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  3252264 aggtactgggtcactgagttaatggttgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccggataactcggctagttgactcggt 3252363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 3014236 - 3014087
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||||||||||| ||  ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |  |||| |||||    
T  3014236 ggtactgggtcactggattaatggtcgaaccactgagtcattggttgaaccacatgactgaaccggattaaaccgaataactcggttaaatgacccggtc 3014137  T
Q  117 ttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaacc 166  Q
    ||| | ||||        | |||||||| || ||||||||||||||||||    
T  3014136 ttaagattaaatttttataggtatttaactatattaaatcggattgaacc 3014087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 3794185 - 3794341
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtct 117  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| || |||| || |||    
T  3794185 gtactgggtcattgggttaatggtcgaaccactgagtcattggttgaaccgcatgactgaaccagtttaaactgaataactcggttagatgacccgatct 3794284  T
Q  118 tacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    || | ||||        | ||||||||| | ||||||||||||||||| ||||||||    
T  3794285 taagattaaatttttataggtatttaatcatattaaatcggattgaactgatgactc 3794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 32364176 - 32364262
Alignment:
Q  33 gttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| || |||||||||||||    
T  32364176 gttaatggtcgaaccactgggtcactggttgaaccgcatgactgaatcggattaaaccggataactcggttagatgactcggtctta 32364262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 44410751 - 44410849
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggt 115  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||  || |||||||||    
T  44410751 ggtactgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactaaatcagattaaaccgaataactcggctagatgactcggt 44410849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 33690198 - 33690295
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcgg 114  Q
    |||||||||||| || |||||||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||    
T  33690198 ggtactgggtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgattgaatcggattaaaccgaataactcggttagatgactcgg 33690295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 18032321 - 18032408
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactc 99  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |||||||    
T  18032321 gcatgggtactggatcaatgagttaatggtcgaaccactgagtcactggttgaactgcatgactgaattggattaaaccggataactc 18032408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 20726024 - 20726107
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| || |||||||    
T  20726024 tactgggtcaatgagttaatggtcgaaccactgactcactggttgaactgcatgactgaatcggattaaaccgtatgactcggt 20726107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 46545422 - 46545504
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| |||||| || ||||||||||    
T  46545422 actgggtcaatgagtcattggtcgaaccactgagtcattggttgaaccgcatgactgaaccgtattaaatcggataactcggt 46545504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 42866317 - 42866383
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||||||||    
T  42866317 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccgga 42866383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 49241683 - 49241766
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||| ||| || ||||||||||||||||| |||||  ||||||||||||||| ||||||| ||||||||| |||||||||||    
T  49241683 tactggatcattgggttaatggtcgaaccaccgagtcgttggttgaaccgcatggctgaacctgattaaaccaaataactcggt 49241766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 28234838 - 28234904
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  28234838 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 28234904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 44257809 - 44257875
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||| ||||    
T  44257809 ggtactgggtcaatgagtcaatggtcgaaccaccgagtcattggtcgaaccgcatgactgaatcgga 44257875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 3355441 - 3355505
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||| || |||||||||| |||||||||| |||| |||||||||||||||||||||    
T  3355441 tactgggtcaatgggtcaatggtcgaatcactgagtcattggtcgaaccgcatgactgaaccgga 3355505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 24984232 - 24984166
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  24984232 ggtactgggtcaatgggtcaatggtcgaactagtgagtcattggtcgaaccgcatgactgaaccgga 24984166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 45484224 - 45484289
Alignment:
Q  54 tcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||| || |||| | ||||||    
T  45484224 tcactggttgaaccgcatgactgaatcggattaaaccggataactcggttaggtgaccccgtctta 45484289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 4225125 - 4225077
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  4225125 aatggtcgaaccactgagtcattggttgaaccgcataactgaaccggat 4225077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 11191471 - 11191403
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaa 88  Q
    ||||||||  ||||| | ||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  11191471 actgggtcgctgagtcattggtcgaaccactgagtcattggttgaaccacatgactgaaccgtattaaa 11191403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 37034947 - 37034875
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||| |||||||||| | || || |||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  37034947 gcatgggtactgggttactgggtcaatggtcgaaccactgggtcattggtcgaaccgcatgactgaaccggat 37034875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 40960271 - 40960191
Alignment:
Q  22 tgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||| ||||||||||||||| |||||| |||||||||||| ||  |||||||| | |||||||  ||||||||||||    
T  40960271 tgggtcaacgagttaatggtcgaatcactgaatcactggttgaatcgtttgactgaatcagattaaattgaataactcggt 40960191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 52585217 - 52585273
Alignment:
Q  47 cactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggta 103  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| | ||||||||    
T  52585217 cactgagtcattggtcgaaccgcatgactgaaccggattaaaccgattgactcggta 52585273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 28282017 - 28282100
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||| ||||| | |||| |||||| || |||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  28282017 tactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgatagaacctgattaaaccggatgactcggt 28282100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 45774829 - 45774880
Alignment:
Q  51 gagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||||    
T  45774829 gagtcattgattgagccgcatgactgaaccggattaaaccgaataactcggt 45774880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 50323371 - 50323469
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtct 117  Q
    |||||||||| || |||| ||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||  | ||||||| || |||||| ||||    
T  50323371 tactgggtcactgggttattggtcgaaccattaggtcactggtcgaaccgcatgatagaaccggattaaaccggttgactcggttagatgactcagtct 50323469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 51727094 - 51727159
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccg 81  Q
    ||||||||| ||| ||||| | || |||||||| ||||||| ||||||||||||||||||||||||    
T  51727094 aggtactggatcactgagtcattgatcgaaccattgagtcattggttgaaccgcatgactgaaccg 51727159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 50359028 - 50358944
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggta 103  Q
    |||| ||||| ||||| | ||||||||||||||| ||| |||| ||||||||||||||||  | |||||||||| | ||||||||    
T  50359028 tactaggtcactgagtcattggtcgaaccactgaatcattggtcgaaccgcatgactgaattgaattaaaccgattgactcggta 50358944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 4332001 - 4331946
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaa 93  Q
    |||| ||||||||| |||| |||||||||||||||||| || ||||||||||||||    
T  4332001 tggttgaaccactgggtcattggttgaaccgcatgactaaatcggattaaaccgaa 4331946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 46535319 - 46535272
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  46535319 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 46535272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 27415294 - 27415209
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||||| ||  | |||||| |||||||||  ||| ||||||||||||| ||||||| || ||| |||||||| |||||||    
T  27415294 ggtactgggtcactggttcaatggttgaaccactggatcattggttgaaccgcacgactgaatcgaattgaaccgaatgactcggt 27415209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 16914534 - 16914487
Alignment:
Q  37 atggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||||||||||| ||||||  |||||||||||||||||| |||||    
T  16914534 atggtcgaaccactgggtcactaattgaaccgcatgactgaatcggat 16914487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 12792720 - 12792762
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaa 78  Q
    |||||||||||||| |||||| |||| ||||||||||||||||    
T  12792720 aatggtcgaaccaccgagtcattggtcgaaccgcatgactgaa 12792762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 17857923 - 17858005
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||| | ||||| ||||||  |||||||  |||| |||||||||  |||||||||||| ||||| |||| ||||||||||    
T  17857923 actgggttactgagtcaatggttcaaccactaggtcattggttgaactacatgactgaaccagattataccggataactcggt 17858005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 17950363 - 17950405
Alignment:
Q  60 gttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||||||||||| | |||||||||| ||||||||||    
T  17950363 gttgaaccgcatgactgaatcagattaaaccggataactcggt 17950405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 45193259 - 45193177
Alignment:
Q  21 ctgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggta 103  Q
    |||||||| || || | ||||||||||||||| ||| | || |||||||||||| ||| |||||| ||||| || ||||||||    
T  45193259 ctgggtcactgggtcattggtcgaaccactgaatcattagtcgaaccgcatgaccgaatcggattgaaccggatgactcggta 45193177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 48303248 - 48303206
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaa 78  Q
    ||||||||||||||||||||| | || ||||||||||||||||    
T  48303248 aatggtcgaaccactgagtcattagtggaaccgcatgactgaa 48303206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 19554256 - 19554183
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccga 92  Q
    |||||| ||| ||||| | || |||||||||||| ||| |||| |||||| |||||||||| | ||||||||||    
T  19554256 tactggatcactgagtcattgatcgaaccactgaatcattggtcgaaccgtatgactgaactgaattaaaccga 19554183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 37701572 - 37701535
Alignment:
Q  47 cactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  37701572 cactgagtcattggttgaaccgcatgactgaatcggat 37701535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 41983842 - 41983797
Alignment:
Q  11 agcataggtactgggtcaatgagttaatggtcgaaccactgagtca 56  Q
    ||||| ||||||| |||| ||||||||||||||||||| |||||||    
T  41983842 agcatgggtactgagtcagtgagttaatggtcgaaccattgagtca 41983797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 20117906 - 20117850
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgact 75  Q
    ||||| |||| || || ||||||||||||| ||||| | ||||||||||||||||||    
T  20117906 tactgagtcattgggtcaatggtcgaaccattgagttattggttgaaccgcatgact 20117850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 30789189 - 30789133
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaat 94  Q
    |||| ||||||||  |||||||||| |||||||||||||||  |||||||| |||||    
T  30789189 tggttgaaccactaggtcactggttaaaccgcatgactgaattggattaaatcgaat 30789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 49528962 - 49529002
Alignment:
Q  51 gagtcactggttgaaccgcatgactgaaccggattaaaccg 91  Q
    |||||||||||||||||||||| ||||| | ||||||||||    
T  49528962 gagtcactggttgaaccgcatggctgaatcagattaaaccg 49529002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 8e-48; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 35054778 - 35054618
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgact 111  Q
    |||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  35054778 gcatgggtactgggtcagtgagttaatggtcgaaccattgggtcactggttgaaccgcatgactgaaccgaattaaaccaaataactcgataagttgact 35054679  T
Q  112 cggtcttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgac 172  Q
    |||||||||| ||||        |||||||||| |||||||||| ||||||||||||||||    
T  35054678 cggtcttacgattaaatttttatatgtatttaactagattaaattggattgaaccgatgac 35054618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 42217226 - 42217127
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggt 115  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||    
T  42217226 aggtactgggtcattgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaatcggattaaaccgaataactcggctagatgactcggt 42217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 42907811 - 42907964
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||||| |  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||| || |||||||| ||||    
T  42907811 actgggtcattaggttaatggtcgaaccactgagtcattggttgaaccgcatgactgaaccggattaaaccgtattactcggttagatgactcgg-ctta 42907909  T
Q  120 cgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
     | ||||        | |||||||| |||||||||||||||||||||||||||||    
T  42907910 ggattaactttttttaagtatttaactagattaaatcggattgaaccgatgactc 42907964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 3046483 - 3046635
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||||||| ||| |||||||| |||||||||||||  ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  3046483 ggtactggatcagtgagttaacggtcgaaccactggatcactagttgaaccgcatgactgaacc-gattaaactgaataactcggtaagttgactcggtc 3046581  T
Q  117 ttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatga 171  Q
    ||||| ||||        |||||||||| |||||||||||  |||||||||||||    
T  3046582 ttacgattaa-attttatatgtatttaactagattaaatcaaattgaaccgatga 3046635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 51537253 - 51537151
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||| ||||||| || ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||| || ||||||||||    
T  51537253 ggtattgggtcactgggttaatggtcgaaccactgggtcactggttgaaccgcatgtctgaatcggattaaaccggataactcggttagatgactcggtc 51537154  T
Q  117 tta 119  Q
    |||    
T  51537153 tta 51537151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 29727776 - 29727932
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||| ||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| || || ||||||||||    
T  29727776 ggtattgggtcattgggttaatggttgaaccactgagtcactagttgaaccgcatgactgaatcggattaaaccggataactcagttagatgactcggtc 29727875  T
Q  117 ttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgact 173  Q
    ||| | ||||        |  ||||||| |||||||||||| ||||||||| |||||    
T  29727876 ttaagattaaatttttatagctatttaactagattaaatcgaattgaaccggtgact 29727932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 15100648 - 15100727
Alignment:
Q  22 tgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  15100648 tgggtcattgggttaatggtcgaaccactgagtcactgattgaaccgcatgactgaatcggattaaaccgaataactcgg 15100727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 53351210 - 53351294
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||||||| |  ||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  53351210 ggtactgggtcattaggttaatggttgaaccactgagtcgttggttgaaccgcatgactgaaccggattaaaccggataactcgg 53351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 50007363 - 50007260
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgact 111  Q
    ||||||||||||||||| |||||  ||||||||||||  | || ||||||||||||||||||||||| ||||| |||||| || |||||||||| | |||    
T  50007363 gcataggtactgggtcactgagtcgatggtcgaaccatcgggttactggttgaaccgcatgactgaatcggatcaaaccggatgactcggtaagataact 50007264  T
Q  112 cggt 115  Q
    ||||    
T  50007263 cggt 50007260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 6101984 - 6101917
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||||||||||||||||| | ||||||||||| |||||||||||| |||||||||||||||| |||||    
T  6101984 ggtactgggtcaatgagtcattggtcgaaccattgagtcactggtcgaaccgcatgactgaatcggat 6101917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 30465150 - 30465084
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  30465150 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 30465084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 41462422 - 41462320
Alignment:
Q  13 cataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactc 112  Q
    |||||||||||||||| |||||  ||||||||||||  | |||||| ||||||||||||||||||| | |||||||||| || | |||||||| | ||||    
T  41462422 cataggtactgggtcactgagtcgatggtcgaaccatcgggtcacttgttgaaccgcatgactgaatctgattaaaccggatgattcggtaagataactc 41462323  T
Q  113 ggt 115  Q
    |||    
T  41462322 ggt 41462320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 55258148 - 55258082
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  55258148 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 55258082  T

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Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 29025298 - 29025364
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || |||||| |||||| ||||||| |||| |||||||||||||||||||||    
T  29025298 ggtactgggtcaatgggtcaatggttgaaccagtgagtcattggtcgaaccgcatgactgaaccgga 29025364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 37599937 - 37599876
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 78  Q
    |||||||||||||||  | ||||||||||||||||||||| |||| ||||||||||||||||    
T  37599937 ggtactgggtcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 37599876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 2849327 - 2849263
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||| ||||||||||||| || ||||||| |||| |||||||||||||||| ||||    
T  2849327 tactgggtcaatgggttaatggtcgaatcattgagtcattggtcgaaccgcatgactgaatcgga 2849263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 11575028 - 11575120
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaa 104  Q
    ||||||||||||||||| ||| |  ||||||||||||  | |||| |||||||||||| |||||||| ||||| |||||| || |||||||||    
T  11575028 gcataggtactgggtcattgaatcgatggtcgaaccatcgggtcattggttgaaccgcgtgactgaatcggatcaaaccggatgactcggtaa 11575120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 23241926 - 23241860
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||| |||||||||| || ||||||||||||||||| ||| |||| |||||||||||||||| ||||    
T  23241926 ggtattgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactgaatcgga 23241860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 39850734 - 39850800
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||| |||||||| || ||||||||||||||||||||| |||| ||||||||||| |||| ||||    
T  39850734 ggtactaggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgattgaatcgga 39850800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 33634922 - 33634978
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatga 73  Q
    |||||||||| |||| || ||||||||||||||||||||| |||| |||||||||||    
T  33634922 ggtactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatga 33634978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 11018770 - 11018825
Alignment:
Q  44 aaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactc 99  Q
    ||||| ||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  11018770 aaccagtgagtcattggtcgaaccgcataactgaaccggattaaaccggataactc 11018825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 33987281 - 33987222
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 78  Q
    |||||| ||||||||| |||||| ||| |||||||||| |||| ||||||||||||||||    
T  33987281 tactggatcaatgagtcaatggttgaatcactgagtcattggtcgaaccgcatgactgaa 33987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 44832461 - 44832508
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||| |||||| |||| |||||||||||||||||||||    
T  44832461 aatggtcgaaccaccgagtcattggtcgaaccgcatgactgaaccgga 44832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 53724100 - 53724176
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    ||||||||||||||||||||||||||||||        |||| ||||||||| |||||||||  |||||||||| ||||||||||    
T  53724100 ggtactgggtcaatgagttaatggtcgaac--------cactagttgaaccgaatgactgaattggattaaaccaaataactcgg 53724176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 40918341 - 40918377
Alignment:
Q  138 tatttaattagattaaatcggattgaaccgatgactc 174  Q
    |||||||| ||||||||||||||||||||||||||||    
T  40918341 tatttaatcagattaaatcggattgaaccgatgactc 40918377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 45158518 - 45158566
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||||| ||||||| |||||| |||| ||||||||||||||||||||||    
T  45158518 aatggttgaaccaccgagtcattggtcgaaccgcatgactgaaccggat 45158566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 26725602 - 26725644
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaa 78  Q
    ||||||||||||||||||| | |||| ||||||||||||||||    
T  26725602 aatggtcgaaccactgagttattggtcgaaccgcatgactgaa 26725644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 45104174 - 45104104
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaa 88  Q
    ||||||||||| || || ||||||||||||||||  |||||||| |||| ||||||  ||| |||||||||    
T  45104174 gtactgggtcactgggtcaatggtcgaaccactggatcactggtcgaactgcatgaaagaatcggattaaa 45104104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 47715724 - 47715678
Alignment:
Q  32 agttaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 78  Q
    |||||||||||||| || ||| |||||||||||| ||||||||||||    
T  47715724 agttaatggtcgaatcattgaatcactggttgaatcgcatgactgaa 47715678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 52404395 - 52404313
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctt 118  Q
    ||||||| ||||||||||||| |||| ||||||||||| | |||||||| ||  || || ||||||| || | ||||||||||    
T  52404395 aatggtcaaaccactgagtcattggtcgaaccgcatgattaaaccggatcaactcggatgactcggttagataactcggtctt 52404313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 6739532 - 6739451
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||||  |||| ||||||  ||||| || |||| ||||||||||||||||| |||||| |||||| || ||| |||||    
T  6739532 actgggtcaccgagtcaatggttcaaccattgggtcattggttgaaccgcatgacagaaccgaattaaatcggatagctcgg 6739451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 21635389 - 21635324
Alignment:
Q  53 gtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctt 118  Q
    |||||||||||||| | |||||||||||||| | || || || ||||||| |||| ||||||||||    
T  21635389 gtcactggttgaacagtatgactgaaccggaatgaatcggatgactcggtcagttaactcggtctt 21635324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 27227221 - 27227266
Alignment:
Q  53 gtcactggttgaaccgcatgactgaaccggattaaaccgaataact 98  Q
    ||||||||||||||||||||| |||| ||||| ||| |||||||||    
T  27227221 gtcactggttgaaccgcatgattgaatcggatcaaatcgaataact 27227266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 3752964 - 3752908
Alignment:
Q  44 aaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcg 100  Q
    |||||||  |||| ||||||||| ||||||||||||| |||| || |||||||||||    
T  3752964 aaccactaggtcaatggttgaactgcatgactgaaccagattgaatcgaataactcg 3752908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 32493254 - 32493092
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgact 111  Q
    |||| |||| ||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||||||| |||||||| |||    
T  32493254 gcatgggtattgggtcagtgagttaatggtcgaaccactggatcattggttgaaccgcatgactgaaccgaattaaaccgaataacttggtaagttcact 32493155  T
Q  112 cggtcttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    |||||||||| ||||         ||||||||| ||||||||||||||||||||| |||||||    
T  32493154 cggtcttacgattaaatttttatgtgtatttaactagattaaatcggattgaacccatgactc 32493092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 38712287 - 38712130
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||| ||||||| |||||||||||  ||||| ||| || |||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  38712287 ggtaatgggtcagtgagttaatgggggaaccgctgggttactggttgaatcgcatgactgaatcggattaaaccaaataactcggtaagttgattcggtc 38712188  T
Q  117 ttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    ||||| ||||        |||||||||| |||||||||||||||||||||||||||||    
T  38712187 ttacgattaaatttttatatgtatttaactagattaaatcggattgaaccgatgactc 38712130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 28761745 - 28761643
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||||||||| | || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| || ||||||||||    
T  28761745 ggtactgggttattgggtcaatggtcgaaccactgagtcactggttgaaccgcatgactgaatcggattaaaccggataactcggttaggtgactcggtc 28761646  T
Q  117 tta 119  Q
    |||    
T  28761645 tta 28761643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 31893268 - 31893201
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggatta 86  Q
    |||||||||||||||| |  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  31893268 tactgggtcaatgagtcatcggtcaaaccactgagtcactggttgaaccgcatgactgaaccggatta 31893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 42063501 - 42063567
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||||||||    
T  42063501 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccgga 42063567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 6545722 - 6545807
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||||| || || |||||||||||||  |||||| |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  6545722 ggtactgggtcactgggtcaatggtcgaaccagcgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcggt 6545807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 597276 - 597346
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccg 91  Q
    ||||| ||| ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||    
T  597276 actggatcattgagttaatggtcgaaccactgagtca-ttgttgaaccgcgtgactgaaccggattaaaccg 597346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 29867769 - 29867852
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||| || || | |||| |||||| ||||||||||||||||||||||||||||||||||||||| || || |||||||    
T  29867769 tactgggtcattgggtcattggttgaaccagtgagtcactggttgaaccgcatgactgaaccggattaaatcggatgactcggt 29867852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 41726423 - 41726356
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  41726423 aggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 41726356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 19726777 - 19726711
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  19726777 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 19726711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 40485617 - 40485551
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  40485617 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 40485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 45219589 - 45219507
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||| ||||| | ||||||||||| || |||| ||||||||||||||||||||| |||||||||||| || |||||||    
T  45219589 actgggtcactgagtcattggtcgaaccattgggtcaatggttgaaccgcatgactgaatcggattaaaccggatgactcggt 45219507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 20821858 - 20821791
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggatta 86  Q
    ||||| |||| || |||||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  20821858 tactgagtcactgggttaatggtcgaaccactgagtcacctgttgaaccgcataactgaaccggatta 20821791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 30360493 - 30360560
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||||| || ||||||||||||||||||||| || | |||||||||||||||| ||||    
T  30360493 aggtactgggtcaatgggtcaatggtcgaaccactgagtcattgttcgaaccgcatgactgaatcgga 30360560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 36823504 - 36823421
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||| ||||||| |||| |||||| || |||||||||||||||||||||  ||||||||||||| || || |||||||    
T  36823504 tactgggtcactgagttattggttgaaccattgggtcactggttgaaccgcatgatggaaccggattaaatcggatgactcggt 36823421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 39375172 - 39375254
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctt 118  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| ||  || || ||||||| || | ||||||||||    
T  39375172 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggatcaactcggatgactcggttagataactcggtctt 39375254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 8014966 - 8014901
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    ||||||||||||| ||||||| |||| ||||||||| |||||| |||||||||||| |||||||||    
T  8014966 aatggtcgaaccagtgagtcattggtcgaaccgcataactgaatcggattaaaccggataactcgg 8014901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 18656677 - 18656629
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  18656677 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 18656629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 26403688 - 26403637
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccg 68  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  26403688 ggtactgtgtcattgagttaatggttgaaccactgagtcactggttgaaccg 26403637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 36833943 - 36834010
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||||||||||| || || ||||||||||||||||| ||| || | ||||||||||||||||||||||    
T  36833943 ggtactgggtcattgggtcaatggtcgaaccactgaatcattgatcgaaccgcatgactgaaccggat 36834010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 4455398 - 4455352
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  4455398 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 4455352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 13487214 - 13487148
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||| ||||||  | ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  13487214 ggtactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 13487148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 29190686 - 29190616
Alignment:
Q  30 tgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcg 100  Q
    ||||||| |||| |||| | || |||||||||||||||||||||  ||||||||||||||||||| |||||    
T  29190686 tgagttattggttgaacaattgggtcactggttgaaccgcatgatggaaccggattaaaccgaatgactcg 29190616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 39533909 - 39533982
Alignment:
Q  25 gtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataact 98  Q
    |||| ||||| ||||||||||||||| ||||| ||| |||||||||||| |||| |  ||||||||||||||||    
T  39533909 gtcactgagtcaatggtcgaaccactaagtcattgggtgaaccgcatgattgaatcaaattaaaccgaataact 39533982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 44056547 - 44056499
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  44056547 aatggtcgaaccactgagtcattggtcgaaccgtatgactgaaccggat 44056499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 5970048 - 5970001
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  5970048 aatggtcgaaccattgagtcattggttgaaccgcatgactgaatcgga 5970001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 36658565 - 36658612
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  36658565 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 36658612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 31008599 - 31008533
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||| ||||||| || ||||||||||||| ||||||| |||| ||||||||||| |||| ||||    
T  31008599 ggtactgagtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgattgaatcgga 31008533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 11031071 - 11031144
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccga 92  Q
    |||||||||| || || ||||||||||||   | |||| ||||||||||||||||  |||||||||||||||||    
T  11031071 tactgggtcactgggtcaatggtcgaaccgtcgggtcattggttgaaccgcatgatagaaccggattaaaccga 11031144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14910135 - 14910192
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgact 75  Q
    ||||||| |||||| || |||| |||||||||||||||| |||| |||||||||||||    
T  14910135 gtactggatcaatgggtcaatgatcgaaccactgagtcattggtcgaaccgcatgact 14910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 3655898 - 3655954
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgact 75  Q
    |||||| ||||||  | ||||||||||||||||||||| |||| |||||||||||||    
T  3655898 tactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgact 3655954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 11922623 - 11922668
Alignment:
Q  44 aaccactgagtcactggttgaaccgcatgactgaaccggattaaac 89  Q
    |||||| |||||| ||||||||||||||||||||| | ||||||||    
T  11922623 aaccacggagtcattggttgaaccgcatgactgaatcagattaaac 11922668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 12639403 - 12639359
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaacc 80  Q
    |||||| |||||| ||||||| |||||||||||||||||| ||||    
T  12639403 aatggttgaaccattgagtcattggttgaaccgcatgacttaacc 12639359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 27845985 - 27845913
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccg 91  Q
    |||||||| | ||||| | |||| |||||| || || ||||||||||||| ||||  ||||||||||||||||    
T  27845985 tactgggttactgagtcattggttgaaccattgggttactggttgaaccgtatgatagaaccggattaaaccg 27845913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 8132829 - 8132928
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggt 115  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  8132829 aggtactgggtcactgagttaatggttgaaccactgagtcattggttgaaccgcatgactgaaccggattaaaccggataactcggctagttgactcggt 8132928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 4414454 - 4414556
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| | |  ||||||||||    
T  4414454 ggtactgggtcactgggtcaatggtcgaaccactgagtcacttgttgaaccgcatgactgaatcggattaaaccggataactcgattaaatgactcggtc 4414553  T
Q  117 tta 119  Q
    |||    
T  4414554 tta 4414556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 6355035 - 6354939
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactc 112  Q
    |||| ||| |||| || |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  6355035 aggttctgagtcactgggttaatggtcgaaccattgagtcaatagttgaaccgcatgactgaaccggattaaaccgaataacccggttagatgactc 6354939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 19916501 - 19916398
Alignment:
Q  11 agcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgac 110  Q
    |||| ||||||||||||| ||  ||||||||||||||||||| ||  |||||||||||||||||||||| | ||||||| |||||||||||| || ||||    
T  19916501 agcagaggtactgggtcattggattaatggtcgaaccactgaatcgttggttgaaccgcatgactgaactgaattaaactgaataactcggttagatgac 19916402  T
Q  111 tcgg 114  Q
    ||||    
T  19916401 tcgg 19916398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 54822087 - 54822170
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |||||||||    
T  54822087 gtactgggtcactgagtcaatgatcgaaccactgagtcactggttgaaccgcatgactgaaacagattaaatcggataactcgg 54822170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 43245780 - 43245678
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||| ||||||| || |||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||| | ||||||||||| |  ||||||||||    
T  43245780 ggtattgggtcactgggttaatggtcgaaccattgagttactggttgaaccgcataactgaaccggatcaaatcaaataactcggtcatatgactcggtc 43245681  T
Q  117 tta 119  Q
    |||    
T  43245680 tta 43245678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 44352121 - 44352214
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaag 105  Q
    ||||||||||||||||| |||||  |||||||||||| || |||||||||||||||||||||||||| | ||| |||||| || ||||||||||    
T  44352121 gcataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactgaatcagatcaaaccggatgactcggtaag 44352214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 1936571 - 1936504
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  1936571 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 1936504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 25232735 - 25232668
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  25232735 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 25232668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 38519325 - 38519397
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaa 88  Q
    ||||| ||||||| || |||||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  38519325 aggtattgggtcactgggttaatggtcgaaccattgagtcactggttgaaccgcatgacttaaccagattaaa 38519397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 2039126 - 2039192
Alignment:
Q  22 tgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaa 88  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  2039126 tgggtcaatgagtcatcggtcgaaccactgagtcactggttgaacctcattactgaaccggattaaa 2039192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 293611 - 293529
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||| |||||   ||||||||||| || |||||||||||||||||||||||||| |||| ||||||| || |||||||    
T  293611 actgggtcactgagtcgttggtcgaaccattgggtcactggttgaaccgcatgactgaatcggactaaaccggatgactcggt 293529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 7362176 - 7362242
Alignment:
Q  34 ttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcg 100  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||  |||||||||||||||||||    
T  7362176 ttaatggtcgaaccactaaatcattggttgaaccgcatgattgaactagattaaaccgaataactcg 7362242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 12704725 - 12704619
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgact 111  Q
    |||| |||||||||||| | ||| ||||||||||||||||||||| || | ||||||||| |||||||||||| ||  || || ||||||| || | |||    
T  12704725 gcatgggtactgggtcactaagtcaatggtcgaaccactgagtcattgatcgaaccgcattactgaaccggatcaactcggatgactcggttagataact 12704626  T
Q  112 cggtctt 118  Q
    |||||||    
T  12704625 cggtctt 12704619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 13428827 - 13428758
Alignment:
Q  33 gttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||| || ||| | |||||||||||    
T  13428827 gttaatggtcgaaccactgagtcactaattgaaccgcataactgaaccgaatcaaaacaaataactcggt 13428758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 55675459 - 55675560
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    ||||||||||||||  || |||||||||| |||||||||| |||| |||||||| |||| |||||||||||  |||||  |||||| || | ||||||||    
T  55675459 ggtactgggtcaataggtcaatggtcgaatcactgagtcattggtcgaaccgcaagactaaaccggattaactcgaatggctcggttagataactcggtc 55675558  T
Q  117 tt 118  Q
    ||    
T  55675559 tt 55675560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 11792425 - 11792489
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||| || ||||||||||||||||| ||| |||| |||||||||||||||| ||||    
T  11792425 tactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactgaatcgga 11792489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 26203738 - 26203658
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcg 100  Q
    ||||||||| |||||  ||||||||||||  |||||| ||||||||| ||||||||||| |||||||||||| || |||||    
T  26203738 actgggtcactgagtggatggtcgaaccatcgagtcattggttgaactgcatgactgaatcggattaaaccggatgactcg 26203658  T

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Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 23611599 - 23611540
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 78  Q
    |||||||| |||| || ||||||||||||||||||||| |||| ||||||||||||||||    
T  23611599 tactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 23611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 7648080 - 7648127
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  7648080 aatggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccgga 7648127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 18707525 - 18707466
Alignment:
Q  43 gaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||| |||| ||||||||||||| ||||||| |||||| |||||||| |||||||    
T  18707525 gaaccactgtgtcattggttgaaccgcacgactgaatcggattgaaccgaatgactcggt 18707466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 34856052 - 34856131
Alignment:
Q  23 gggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||| ||||| ||||||||||||||||  ||| |||||||||||||||||| |  ||| || |||| |||||||||||    
T  34856052 gggtcactgagtcaatggtcgaaccactggatcattggttgaaccgcatgactaactcggtttgaaccaaataactcggt 34856131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 24394112 - 24394196
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||||||| || || ||||||||||||| ||||| | |||| ||| | ||| |||||||| ||||||| || |||||||||    
T  24394112 ggtactgggtcactgggtcaatggtcgaaccagtgagttattggtcgaatcacataactgaaccagattaaatcggataactcgg 24394196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 29695500 - 29695408
Alignment:
Q  13 cataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaag 105  Q
    ||||| |||||||||| |||||  |||||||||  | || |||||||||||||||||||| | ||| | ||| |||||| || ||||||||||    
T  29695500 catagatactgggtcactgagtcgatggtcgaattattgggtcactggttgaaccgcatggccgaatcagatcaaaccggatgactcggtaag 29695408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 2859458 - 2859529
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaa 88  Q
    |||| ||||||| || || |||||||||||||||| ||||||||| |||| ||||||  ||| |||||||||    
T  2859458 ggtattgggtcactgggtcaatggtcgaaccactgggtcactggtcgaactgcatgaaagaatcggattaaa 2859529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 55497511 - 55497558
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| || | |||||||||||||||| ||||    
T  55497511 aatggtcgaaccactgagtcattgatcgaaccgcatgactgaatcgga 55497558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 8132459 - 8132493
Alignment:
Q  137 gtatttaattagattaaatcggattgaaccgatga 171  Q
    ||||||||| |||||||||||||||||||||||||    
T  8132459 gtatttaatcagattaaatcggattgaaccgatga 8132493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 19281614 - 19281561
Alignment:
Q  25 gtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaa 78  Q
    |||| ||| |||||| |||||||| ||||| || ||||||||||||||||||||    
T  19281614 gtcactgaattaatgatcgaaccattgagttacaggttgaaccgcatgactgaa 19281561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 7362279 - 7362315
Alignment:
Q  138 tatttaattagattaaatcggattgaaccgatgactc 174  Q
    |||||||  ||||||||||||||||||||||||||||    
T  7362279 tatttaaccagattaaatcggattgaaccgatgactc 7362315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 10992780 - 10992695
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  10992780 ggtactgggtcaatgagttaatggtcgaaccactaagtcactggttgaactgcatgactgaatcggattaaaccggataactcggt 10992695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 34191967 - 34191810
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||||||| ||| || ||| |||||||||||||||||||| |||||||||||||||||| || ||||||||||| ||||||||||  || |||| ||||     
T  34191967 ggtactggatcactgggttgatggtcgaaccactgagtcattggttgaaccgcatgactaaatcggattaaaccaaataactcggctagatgacccggtt 34191868  T
Q  117 ttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    ||| | ||||        | |||||||| |||||||||||||||||||||||||||||    
T  34191867 ttaagattaattttttataagtatttaactagattaaatcggattgaaccgatgactc 34191810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 46170683 - 46170782
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||||| || |||||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||| || |||||||| ||||    
T  46170683 actgggtcattgggttaatggtcgaaccactgagtcaatggtcgaaccgcatgaatgaaccggatcaaaccgaataactcggttagatgactcggcctta 46170782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 34259331 - 34259253
Alignment:
Q  24 ggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || ||||||||||    
T  34259331 ggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaatcgaattaaatcggataactcggt 34259253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 33610637 - 33610725
Alignment:
Q  25 gtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcg 113  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||||||||| || |||||||    
T  33610637 gtcactgagttaatggtcgaaccactgagtcattggttgaaccgcatgactgaatcagattaaaccaaataactcggttagatgactcg 33610725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 5418935 - 5419017
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||    ||||||| |||||||||||||||||||||||    
T  5418935 aggtactgggttaatgggttaatggtcgaaccactgagtcactggttgaacc----gactgaatcggattaaaccgaataactcggt 5419017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 31813527 - 31813629
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||||||| |||||| |||||||||||||||||||||||| ||||||||  |||||| |||| || |||||||||||||||||||| || |||  |||||    
T  31813527 ggtactggttcaatgggttaatggtcgaaccactgagtcagtggttgaattgcatgattgaatcgaattaaaccgaataactcggttagatgatccggtc 31813626  T
Q  117 tta 119  Q
    |||    
T  31813627 tta 31813629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 9822558 - 9822642
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||| ||||||| ||||| ||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||| |||||||||    
T  9822558 ggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcgg 9822642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 10724483 - 10724567
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||| ||||||| ||||| ||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||| |||||||||    
T  10724483 ggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcgg 10724567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 25069344 - 25069422
Alignment:
Q  24 ggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||| | | ||||||||||||||||||| |||||||||||||||||||||||| |||||| || ||||||||||    
T  25069344 ggtcaatgaatcattggtcgaaccactgagtcattggttgaaccgcatgactgaaccgtattaaatcggataactcggt 25069422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 45269515 - 45269430
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    ||||||||||||| || || ||||||||||||| ||||||| |||| ||||||||| |||||| |||||||||||| |||||||||    
T  45269515 aggtactgggtcactgggtcaatggtcgaaccagtgagtcattggtcgaaccgcataactgaatcggattaaaccggataactcgg 45269430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 11734306 - 11734240
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  11734306 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 11734240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 17833720 - 17833802
Alignment:
Q  33 gttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggt 115  Q
    ||||||| |||||||||||||||  ||||||| ||||||||||||||| || ||||||| ||||||||||||| |||| ||||    
T  17833720 gttaatgatcgaaccactgagtcgttggttgagccgcatgactgaaccagactaaaccggataactcggtaagatgacccggt 17833802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 29983274 - 29983340
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  29983274 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 29983340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36099752 - 36099686
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  36099752 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 36099686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 44605996 - 44605930
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || |||||| |||||||||||||| |||| |||||||||||||||||||||    
T  44605996 ggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactgaaccgga 44605930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 1582197 - 1582265
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaa 88  Q
    ||||||||||||||| ||||||||||||  ||||||| || |||||||||||||||||| |||||||||    
T  1582197 actgggtcaatgagtcaatggtcgaaccgttgagtcattgattgaaccgcatgactgaatcggattaaa 1582265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 36858174 - 36858238
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  36858174 tactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 36858238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 16217075 - 16217002
Alignment:
Q  11 agcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||| |||| ||||||| || || ||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  16217075 agcatgggtattgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccacatgactgaaccggat 16217002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 10198365 - 10198413
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  10198365 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 10198413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 16560960 - 16561043
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||| ||||| | |||| |||||| || |||||||||||||||||||||  |||||||||||||| | || |||||||    
T  16560960 tactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgatagaaccggattaaactggatgactcggt 16561043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 16604702 - 16604619
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||| ||||| | |||| |||||| || |||||||||||||||||||||  |||||||||||||| | || |||||||    
T  16604702 tactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgatagaaccggattaaactggatgactcggt 16604619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 24096784 - 24096721
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaacc 80  Q
    |||||||||||| ||  | ||||||||||||||||||||| |||| |||||||||| |||||||    
T  24096784 ggtactgggtcactggatcaatggtcgaaccactgagtcattggtcgaaccgcatgtctgaacc 24096721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 47423503 - 47423550
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  47423503 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 47423550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 16198750 - 16198688
Alignment:
Q  40 gtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||| ||| || || |||||||    
T  16198750 gtcgaaccactgggtcactggttgaaccgcatggctgaaacggatcaaatcggatgactcggt 16198688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 46004212 - 46004155
Alignment:
Q  44 aaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||  ||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  46004212 aaccactggatcattggttgaactgcatgactgaaccggattaaaccg-ataactcggt 46004155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 20623194 - 20623246
Alignment:
Q  23 gggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgact 75  Q
    |||||| ||||| |||||||||| ||||| |||| ||||||||||||||||||    
T  20623194 gggtcactgagtcaatggtcgaatcactgggtcattggttgaaccgcatgact 20623246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 25830142 - 25830210
Alignment:
Q  33 gttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    ||||||||| |||||||||  ||||||||||||||   ||||||||||  ||||||||| |||||||||    
T  25830142 gttaatggttgaaccactggttcactggttgaaccatttgactgaaccaaattaaaccggataactcgg 25830210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 31958677 - 31958613
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||| |||||||||||| |||||||||||  ||| |||||| || ||||| |||||||    
T  31958677 tggtcgaaccattgagtcactggtcgaaccgcatgatagaatcggattgaatcgaatgactcggt 31958613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 45498889 - 45498951
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactc 99  Q
    ||||||||||||| ||||||| || | |||||| ||||||||||| |||||||||| |||||||    
T  45498889 aatggtcgaaccattgagtcattgatcgaaccgaatgactgaacc-gattaaaccggataactc 45498951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 49032364 - 49032443
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtct 117  Q
    ||||||||||| ||| ||  |||| ||||||||| ||||||||| |||||||||  | |||||||||| |||| ||||||    
T  49032364 tggtcgaaccattgaatcgttggtcgaaccgcataactgaaccgtattaaaccggttgactcggtaagatgacccggtct 49032443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 8420031 - 8419959
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaac 89  Q
    |||| ||||||| || || | ||||||||||| || ||||||||| |||||||||||   |||||||||||||    
T  8420031 ggtattgggtcactgggtcattggtcgaaccattgggtcactggtcgaaccgcatgatgaaaccggattaaac 8419959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 23595730 - 23595887
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||||||||||| || ||| |||||||||||||||||||| |||||||||||||||| | || ||||||||||| ||||||||||  || |||| ||||     
T  23595730 ggtactgggtcactgggttgatggtcgaaccactgagtcattggttgaaccgcatgattaaatcggattaaaccaaataactcggctagatgacccggtt 23595829  T
Q  117 ttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    ||| | ||||        | |||||||| |||||||||||||||||||||||||||||    
T  23595830 ttaagattaattttttataagtatttaactagattaaatcggattgaaccgatgactc 23595887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 6817329 - 6817413
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||    
T  6817329 ggtactgggtcattgggttaatggtcgaaccactgagtcactggttgaaccgcataactaaatcggattaaaccgaataattcgg 6817413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 30426357 - 30426441
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  30426357 ggtactggatcaataagttaatggtcgaaccactaagtcactggttgaaccgcatgattgaatcagattaaaccaaataactcgg 30426441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 29419813 - 29419731
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| || |||||||||||||    
T  29419813 aatggtcaaaccactgagtcactggttgaaccgcatgactgaatcggattaaa-cggataactcggttaggtgactcggtctta 29419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 30269632 - 30269698
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| ||||    
T  30269632 ggtactgggtcaatgagttaatggtcgaaccactgagtcgttggtcgaaccgcatgactgaatcgga 30269698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 21289589 - 21289655
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  21289589 ggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccgga 21289655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 735096 - 735158
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcg 100  Q
    ||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||| |||||    
T  735096 tggtcgaaccattgagtaactggttgaactgcatgactgaatcggattaaaccgaatgactcg 735158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 8464321 - 8464383
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaacc 80  Q
    ||||||||||| ||||||||||||||||||||| | ||| |||| ||||||||||||||||||    
T  8464321 gtactgggtcactgagttaatggtcgaaccactaaatcattggtcgaaccgcatgactgaacc 8464383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 24068261 - 24068195
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||| |||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  24068261 ggtattgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 24068195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 11465360 - 11465427
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||||||||||||||||| | ||||||||||| ||  |||||||| |||||||||||||||| |||||    
T  11465360 ggtactgggtcaatgagtcattggtcgaaccattggatcactggtcgaaccgcatgactgaatcggat 11465427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 34779975 - 34779909
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||||| ||||||  || | ||||||||| | ||||||||||||||||| ||||||||||    
T  34779975 aatggtcgaaccagtgagtcgttgatcgaaccgcataattgaaccggattaaaccggataactcggt 34779909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 35166138 - 35166056
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||| || ||||||| |||| |||||||||  ||| |||||||||||||| ||||||| | |||||| || ||||||||||    
T  35166138 actgggccactgagttattggttgaaccactggatcattggttgaaccgcataactgaactgtattaaatcggataactcggt 35166056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 22351297 - 22351258
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgact 75  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  22351297 aatggtcgaaccactgagtcattggtcgaaccgcatgact 22351258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 31513437 - 31513370
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||||| ||||||| || |||||| |||||| || |||| |||| ||||||||||||| ||||||||    
T  31513437 ggtactgagtcaatgggtcaatggttgaaccattgggtcattggtcgaaccgcatgactaaaccggat 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 4455893 - 4455848
Alignment:
Q  44 aaccactgagtcactggttgaaccgcatgactgaaccggattaaac 89  Q
    ||||||||| | ||||||| ||||||||||||||||||||| ||||    
T  4455893 aaccactgatttactggttaaaccgcatgactgaaccggatgaaac 4455848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 21528875 - 21528807
Alignment:
Q  47 cactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggt 115  Q
    ||||| ||||||||| |||||||||||||||| |||||| || || || ||||||| |  |||||||||    
T  21528875 cactgggtcactggtcgaaccgcatgactgaatcggattgaatcggatgactcggttatatgactcggt 21528807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 6065575 - 6065418
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    ||||||| |||| || ||||||||||||||||||| |||| ||||||||||||||||||||| | |||||||||||||||||||||  | ||||| || |    
T  6065575 ggtactgagtcactgggttaatggtcgaaccactgggtcattggttgaaccgcatgactgaatcagattaaaccgaataactcggtttgatgacttggcc 6065476  T
Q  117 ttacgtttaannnnnnnnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
    ||| |  |||        | ||||||||| ||||||||||||||||||||||||||||    
T  6065475 ttaagaataattttttataggtatttaatcagattaaatcggattgaaccgatgactc 6065418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 16106774 - 16106677
Alignment:
Q  22 tgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtctta 119  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| || ||||||| |||||    
T  16106774 tgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactgaatcggattaaaccagataactcggttagatgactcgatctta 16106677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 10810622 - 10810537
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||||||| ||||||| ||||||||||| ||||  |||||||||||||||||||| | |||||||||||||||||||||    
T  10810622 ggtactgggtcaatgggttaatgatcgaaccactgggtcatcggttgaaccgcatgactgaatcagattaaaccgaataactcggt 10810537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 21800747 - 21800645
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    ||||| |||||| || || |||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| || |||||||||| |  ||||||||||    
T  21800747 ggtaccgggtcactgggtcaatggtcgaatcactgggtcactggttgaactgcatgactgaatcggattaaatcggataactcggttaaatgactcggtc 21800648  T
Q  117 tta 119  Q
    |||    
T  21800647 tta 21800645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 12365597 - 12365512
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||||||||| ||  ||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| || |||||||    
T  12365597 ggtactgggtcactggtttattggtcgaaccactgggtcactggttgaaccgcatgactgaaccgggataaaccggatgactcggt 12365512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 35305360 - 35305259
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtc 116  Q
    |||||||||||| || || ||||||||||||||||||||| |||| |||||||||||||||||||||| ||  || || ||||||| || | ||||||||    
T  35305360 ggtactgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggatcaactcggatgactcggttagataactcggtc 35305261  T
Q  117 tt 118  Q
    ||    
T  35305260 tt 35305259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 19881978 - 19882062
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||||||| |  || ||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||| |||||||||    
T  19881978 ggtactgggtcacttggtcaatggtcgaaccagtgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcgg 19882062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 39678342 - 39678409
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||| |||||||||||||||| ||||    
T  39678342 aggtactgggtcaatgagtcaatggtcgaatcactgagtcattggtcgaaccgcatgactgaatcgga 39678409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7153476 - 7153541
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  7153476 ggtactgggtcaatga-ttaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 7153541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 16457817 - 16457739
Alignment:
Q  12 gcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaacc 90  Q
    |||| |||| |||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||| || ||||||||    
T  16457817 gcatgggtattgggtcaatgagttaatggtggaaccactgaatcactggttgaatcgcataactgaatcgaattaaacc 16457739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 23293250 - 23293184
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  23293250 ggtactgggtcaatgggtgaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 23293184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 37484444 - 37484542
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtct 117  Q
    |||||||||| || |||| || |||||||| |||||||||||| |||||||||||  |||| ||||||||||| || ||||||| || |||||||||||    
T  37484444 tactgggtcattgggttattgatcgaaccattgagtcactggtcgaaccgcatgatggaactggattaaaccggatgactcggttagatgactcggtct 37484542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 24128792 - 24128858
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||| ||| |||| |||||||||||||||| ||||    
T  24128792 ggtactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactgaatcgga 24128858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 26606586 - 26606655
Alignment:
Q  33 gttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||| |||||||||||||||| | ||||||||| ||||||||||| |  ||||||||||||||||||||    
T  26606586 gttaacggtcgaaccactgagttaatggttgaactgcatgactgaatcaaattaaaccgaataactcggt 26606655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 23251008 - 23251092
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||||||| ||  | |||||||||||||  |||||| |||| ||||||||| |||||| |||||||||||| |||||||||    
T  23251008 ggtactgggtcactggatcaatggtcgaaccagcgagtcattggtcgaaccgcataactgaatcggattaaaccggataactcgg 23251092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 32878778 - 32878694
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    |||||||||||  || || ||||||||||||| ||||||| |||| ||||||||| |||||| || ||||||||| |||||||||    
T  32878778 ggtactgggtccctgggtcaatggtcgaaccaatgagtcattggtcgaaccgcataactgaatcgaattaaaccggataactcgg 32878694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 43869988 - 43869924
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||| || |||||||||||||||||||||||||| |||| ||||||| || |||||||    
T  43869988 tggtcgaaccattgggtcactggttgaaccgcatgactgaatcggactaaaccggatgactcggt 43869924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 17513059 - 17513117
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgact 75  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||| ||||||||    
T  17513059 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaactgcatgact 17513117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 22315254 - 22315188
Alignment:
Q  18 gtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    ||||| |||||  |||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  22315254 gtactaggtcaccgagtcaatggtcgaaccactcagtcactggttgaaccacatgattgaaccggat 22315188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 3988746 - 3988811
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||||||||| || || |||||||||| || || |||| |||||||||||||||||||||||||||    
T  3988746 tactgggtcattgggtcaatggtcgaatcattgggtcattggttgaaccgcatgactgaaccggat 3988811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 37032853 - 37032776
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggt 115  Q
    ||||||||||||||| ||||||||||||| ||||||||||| | ||||||| || || ||||| |||| | |||||||    
T  37032853 tggtcgaaccactgaatcactggttgaactgcatgactgaatcagattaaatcggatgactcgttaagataactcggt 37032776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 14885349 - 14885396
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||    
T  14885349 aatggtcgaaccactgagtcattagtcgaaccgcatgactgaaccgga 14885396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 29523936 - 29523889
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  29523936 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 29523889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 31900463 - 31900510
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  31900463 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 31900510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 37314987 - 37314940
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  37314987 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 37314940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 39061974 - 39061927
Alignment:
Q  36 aatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  39061974 aatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 39061927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 24934880 - 24934962
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||| || ||||||| |||| |||||||||  ||| |||||||||||||| ||||||| | |||||| || ||||||||||    
T  24934880 actgggccactgagttattggttgaaccactggatcattggttgaaccgcataactgaactgtattaaatcggataactcggt 24934962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 25683572 - 25683654
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    |||||| || ||||||| |||| |||||||||  ||| |||||||||||||| ||||||| | |||||| || ||||||||||    
T  25683572 actgggccactgagttattggttgaaccactggatcattggttgaaccgcataactgaactgtattaaatcggataactcggt 25683654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 37254896 - 37254831
Alignment:
Q  19 tactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||||||||| ||||| | |||| |||||| || |||||||||||||||||||||  |||||||||    
T  37254896 tactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgatagaaccggat 37254831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 20907123 - 20907195
Alignment:
Q  30 tgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||| ||||||||||| ||||||| |||| |||||||||||||| || ||| |||| || || |||||||    
T  20907123 tgagttactggtcgaaccattgagtcattggtagaaccgcatgactggactggaataaatcggatgactcggt 20907195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 29781491 - 29781538
Alignment:
Q  53 gtcactggttgaaccgcatgactgaaccggattaaaccgaataactcg 100  Q
    |||||||||||||||||||| ||||| |||||||||||| || |||||    
T  29781491 gtcactggttgaaccgcatggctgaatcggattaaaccggatgactcg 29781538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 30963050 - 30963007
Alignment:
Q  30 tgagttaatggtcgaaccactgagtcactggttgaaccgcatga 73  Q
    ||||| |||||||||||||| || ||||||||||||||||||||    
T  30963050 tgagtcaatggtcgaaccaccgaatcactggttgaaccgcatga 30963007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 40404371 - 40404434
Alignment:
Q  38 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcgg 101  Q
    ||||||||||||||  |||||||| |||||||||||| ||| |||||| || || |||||||||    
T  40404371 tggtcgaaccactggatcactggtcgaaccgcatgacagaatcggattgaatcggataactcgg 40404434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 7399184 - 7399238
Alignment:
Q  48 actgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||| | |||||||||||| |||||| |||||||||  ||||||||||||    
T  7399184 actgagtcattcgttgaaccgcattactgaatcggattaaattgaataactcggt 7399238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 29781575 - 29781612
Alignment:
Q  137 gtatttaattagattaaatcggattgaaccgatgactc 174  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  29781575 gtatttaatcagattaaatcggattgaaccggtgactc 29781612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 7934 - 7852
Alignment:
Q  20 actgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggt 102  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||| |||||| || ||||||||||    
T  7934 actgggtcaatgagtcattggtcgaaccactgagtcattggttgaatcgcatgactgaaccgtattaaatcggataactcggt 7852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 64380 - 64472
Alignment:
Q  13 cataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaag 105  Q
    |||||||||||||||| |||||  |||||||||||| || |||||||||||||||||||||||||| ||||| |||||| || ||||| ||||    
T  64380 cataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactgaatcggatcaaaccggatgactcgataag 64472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 7877 - 7945
Alignment:
Q  16 aggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggat 84  Q
    |||||||| |||| || |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  7877 aggtactgagtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgactgaaccggat 7945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 12760 - 12826
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  12760 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaatcgga 12826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 51948 - 52014
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccgga 83  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||  ||||||||||||||||||||    
T  51948 ggtactgggtcaatgagtcaatggtcgaaccacagagtcattggtcaaaccgcatgactgaaccgga 52014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 174
Target Start/End: Complemental strand, 4976 - 4835
Alignment:
Q  33 gttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtcttacgtttaannnnnn 132  Q
    ||||||||||||||||||||||| ||||| || |||| |||||||| | ||||||||| |||||||| || || |||  |||||||| | ||||          
T  4976 gttaatggtcgaaccactgagtcgctggtcgagccgcttgactgaatcagattaaaccaaataactcagttagatgatccggtcttaagattaaattttt 4877  T
Q  133 nnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
      | ||||||||  ||||||||||||||||||| ||||||||    
T  4876 ataggtatttaaccagattaaatcggattgaactgatgactc 4835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 174
Target Start/End: Complemental strand, 4996 - 4855
Alignment:
Q  33 gttaatggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggtaagttgactcggtcttacgtttaannnnnn 132  Q
    ||||||||||||||||||||||| ||||| || |||| |||||||| | ||||||||| |||||||| || || |||  |||||||| | ||||          
T  4996 gttaatggtcgaaccactgagtcgctggtcgagccgcttgactgaatcagattaaaccaaataactcagttagatgatccggtcttaagattaaattttt 4897  T
Q  133 nnatgtatttaattagattaaatcggattgaaccgatgactc 174  Q
      | ||||||||  ||||||||||||||||||| ||||||||    
T  4896 ataggtatttaaccagattaaatcggattgaactgatgactc 4855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 17916 - 17853
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaacc 80  Q
    ||||||| |||| || |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  17916 ggtactgagtcattgggttaatggtcgaaccattgagtcattggttgaaccgcatgactgaacc 17853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 11097 - 11039
Alignment:
Q  17 ggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgact 75  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||    
T  11097 ggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgact 11039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 29551 - 29495
Alignment:
Q  47 cactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcggta 103  Q
    |||||||||| ||||  |||||||| ||||||| |||||||||||| | ||||||||    
T  29551 cactgagtcattggtcaaaccgcatcactgaactggattaaaccgattgactcggta 29495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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