View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9592_low_52 (Length: 235)
Name: NF9592_low_52
Description: NF9592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9592_low_52 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0038 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 43)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 26803223 - 26803445
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26803223 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
26803322 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26803323 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
26803422 |
T |
|
| Q |
201 |
cttttgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
26803423 |
cttttgattctcgatgatgttga |
26803445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 27705809 - 27705587
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27705809 |
caagagcaatttataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaatgacttgaaacatctcca |
27705710 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| |||||| |
|
|
| T |
27705709 |
agagaagcttcttctaaaaacaactggatcgaaaataaagttagatcatgtttgtgaggggattccattcataaaggaaaggctgtgtagaaagaagatt |
27705610 |
T |
|
| Q |
201 |
cttttgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
27705609 |
cttttgattctcgatgatgttga |
27705587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 26624048 - 26624267
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26624048 |
caagagcaatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
26624147 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
||||||||| ||| | ||||||||||||||| |||| ||||| || |||||| ||||||| ||| |||| || |||||||| || |||||||| |||||| |
|
|
| T |
26624148 |
agagaagctcctttttaaaacaactggattggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaagatt |
26624247 |
T |
|
| Q |
201 |
cttttgattctcgatgatgt |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
26624248 |
cttttgattctcgatgatgt |
26624267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 26730025 - 26730244
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26730025 |
caagagcaatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
26730124 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
||||||||| ||| | ||||||||||||||| |||| ||||| || |||||| ||||||| ||| |||| || |||||||| || |||||||| |||||| |
|
|
| T |
26730125 |
agagaagctcctttttaaaacaactggattggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaagatt |
26730224 |
T |
|
| Q |
201 |
cttttgattctcgatgatgt |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
26730225 |
cttttgattctcgatgatgt |
26730244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 31285336 - 31285558
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31285336 |
caagagcaatctataattttattggtgatcaatttgacggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctcca |
31285435 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
||||||||| ||| | ||||||| ||||||| |||| |||||||| |||||| ||||||| |||||||| || |||||||| || |||||||| |||||| |
|
|
| T |
31285436 |
agagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagatt |
31285535 |
T |
|
| Q |
201 |
cttttgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
31285536 |
cttttgattctcgatgatgttga |
31285558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 27679734 - 27679949
Alignment:
| Q |
8 |
aatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaag |
107 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27679734 |
aatctataattttgttgcagatcaattcgaaggttcatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaatatctccaagagaag |
27679833 |
T |
|
| Q |
108 |
cttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttga |
207 |
Q |
| |
|
|| ||| |||||||||| || ||| |||| |||||||| |||||| ||||||| |||||| | |||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
27679834 |
ctccttttaaaaacaacaggtttggaaattaagttagaccatgttagtgagggaattccagtcataaaggaaagattatgtagaaagaagattcttttga |
27679933 |
T |
|
| Q |
208 |
ttctcgatgatgttga |
223 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
27679934 |
ttctcgatgatgttga |
27679949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 27697991 - 27697769
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||| |
|
|
| T |
27697991 |
caagagcaatctataatttggttgctgatcaatttgaaggtttatgttttcttcataatgtgagaatgaattcagctaaaaataacttggaacatctcca |
27697892 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
||||||||| ||| | ||||||||||||| | |||| || ||||| |||||| |||| || |||||||| || |||||||| || |||||||| |||||| |
|
|
| T |
27697891 |
agagaagctcctttttaaaacaactggatcggaaattaatttagaccatgttagtgacggaattccaatcattaaggaaaggctatgtagaaagaagatt |
27697792 |
T |
|
| Q |
201 |
cttttgattctcgatgatgttga |
223 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
27697791 |
cttttgattctcgacgatgttga |
27697769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 26656746 - 26656964
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||| ||| |
|
|
| T |
26656746 |
agcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatctccaggag |
26656845 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||| ||| |||||| | || |||| || ||||||| ||||| ||||||| |||||||| |||||||||||||| | |||||| |||||||||| |
|
|
| T |
26656846 |
gagctcctttcaaaaactgttagagtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagattcttt |
26656945 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
26656946 |
tgattctcgatgatgttga |
26656964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 26762717 - 26762935
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||| ||| |
|
|
| T |
26762717 |
agcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatctccaggag |
26762816 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||| ||| |||||| | || |||| || ||||||| ||||| ||||||| |||||||| |||||||||||||| | |||||| |||||||||| |
|
|
| T |
26762817 |
gagctcctttcaaaaactgttagagtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagattcttt |
26762916 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
26762917 |
tgattctcgatgatgttga |
26762935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 26647267 - 26647476
Alignment:
| Q |
12 |
tataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||| || |||| | |
|
|
| T |
26647267 |
tataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatctccagaaggagctcc |
26647366 |
T |
|
| Q |
112 |
ttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattct |
211 |
Q |
| |
|
|| ||||||| | | |||| || ||||| | ||| |||||||||| |||||||| || |||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
26647367 |
tttcaaaaacagttaaagtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattct |
26647466 |
T |
|
| Q |
212 |
cgatgatgtt |
221 |
Q |
| |
|
|||||||||| |
|
|
| T |
26647467 |
cgatgatgtt |
26647476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 26753235 - 26753444
Alignment:
| Q |
12 |
tataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||| || |||| | |
|
|
| T |
26753235 |
tataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatctccagaaggagctcc |
26753334 |
T |
|
| Q |
112 |
ttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattct |
211 |
Q |
| |
|
|| ||||||| | | |||| || ||||| | ||| |||||||||| |||||||| || |||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
26753335 |
tttcaaaaacagttaaagtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattct |
26753434 |
T |
|
| Q |
212 |
cgatgatgtt |
221 |
Q |
| |
|
|||||||||| |
|
|
| T |
26753435 |
cgatgatgtt |
26753444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 26862361 - 26862579
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||| |||||||||||||| | || |||||||||||| |||| |||| ||||||||||||||| || |
|
|
| T |
26862361 |
agcaatttataattttgttgccgatcaatttgaaggtgtatgttttcttcataaagttagagagaattcaactcataatagcttgaaacatctccagaag |
26862460 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||||||| |||||||| | |||||| || ||||||| ||| | ||||||| |||||| |||||||||||||||| ||||| |||||||||| |
|
|
| T |
26862461 |
gagcttcttttaaaaacagttaaattgaacattaagttaggagatgctagtgagggaattccacttataaaggaaagactaaatagaatgaagattcttt |
26862560 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
26862561 |
tgattctcgatgatgttga |
26862579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 26884851 - 26885069
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||| || |||||||||| ||| | || || ||||||||| |||| |||||||||||||||||||| ||| |
|
|
| T |
26884851 |
agcaatttataattatgttgctgatcaatttgaatgtgtatgttttctgcataaagtcagggagaattcaactcataataacttgaaacatctccaggag |
26884950 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
| || ||| ||||||||| | ||| || || ||||||| ||||| ||||||| |||||| | |||||||||||||| |||||| |||||||||| |
|
|
| T |
26884951 |
gaactccttttaaaaacaattaaattaaacattaagttaggagatgttagtgagggaattccactcataaaggaaagactacatagaaagaagattcttt |
26885050 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
26885051 |
tgattcttgatgatgttga |
26885069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 27427017 - 27426795
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||| ||||| |||||||| | |||| |
|
|
| T |
27427017 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttcca |
27426918 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
|||| ||| ||| ||| ||| | | ||||||| ||||||| |||| ||||||| || |||| ||||||||||| |||||||||| |||||| |
|
|
| T |
27426917 |
ggagatgctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagatt |
27426818 |
T |
|
| Q |
201 |
cttttgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
27426817 |
cttttgattctcgatgacgttga |
27426795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 26143656 - 26143867
Alignment:
| Q |
12 |
tataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||| |||||| ||||||||||||| || | || | |
|
|
| T |
26143656 |
tataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtcataataacctgaaacatctccaggaagatctcc |
26143755 |
T |
|
| Q |
112 |
ttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattct |
211 |
Q |
| |
|
|| ||| |||| | |||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||| | |||||| ||||||||||||||||| |
|
|
| T |
26143756 |
ttttaagaacagttaaattgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattct |
26143855 |
T |
|
| Q |
212 |
cgatgatgttga |
223 |
Q |
| |
|
||||||||||| |
|
|
| T |
26143856 |
tgatgatgttga |
26143867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 27337496 - 27337278
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||| |||| ||||||||| |||| |||||||||||||||| || ||||||||||||||||| || |
|
|
| T |
27337496 |
agcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatctccagaag |
27337397 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||| ||| ||||||| | | |||| || |||||| |||||| |||||| |||||||| || |||||||| || ||||| || |||||||||| |
|
|
| T |
27337396 |
gagctcctttcaaaaacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagattcttt |
27337297 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
27337296 |
tgattctcgatgatgttga |
27337278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 27398236 - 27398018
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||| |||| ||||||||| |||| |||||||||||||||| || ||||||||||||||||| || |
|
|
| T |
27398236 |
agcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatctccagaag |
27398137 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||| ||| ||||||| | | |||| || |||||| |||||| |||||| |||||||| || |||||||| || ||||| || |||||||||| |
|
|
| T |
27398136 |
gagctcctttcaaaaacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagattcttt |
27398037 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
27398036 |
tgattctcgatgatgttga |
27398018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 25539333 - 25539542
Alignment:
| Q |
14 |
taattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttctt |
113 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||||| ||||||| ||| |
|
|
| T |
25539333 |
taattttgttgctgatcaatttgaagttgtatgttttcttcataatgtcagagagaattcaagtcataataacttgaaacatctccaaaagaagctcctt |
25539432 |
T |
|
| Q |
114 |
ctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcg |
213 |
Q |
| |
|
||||| | | ||| | |||||||| ||||| ||||||| || |||| |||||||||||||| | || ||| ||||||||||||||||| | |
|
|
| T |
25539433 |
tcaaaaatagttaaatttgacggtaagttagaagatgttagtgagggaataacaatcataaaggaaagactatctaaaaagaagattcttttgattcttg |
25539532 |
T |
|
| Q |
214 |
atgatgttga |
223 |
Q |
| |
|
|||||||||| |
|
|
| T |
25539533 |
atgatgttga |
25539542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 27530702 - 27530484
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||| |||||||||||| | ||||||||| |||||| || | ||||||||||||||||||||||| |
|
|
| T |
27530702 |
agcaatttataatttcattgctgatcaatttgaagttttatgttttctagaaaatgtgagagtgaattcgacttcagataacttgaaacatctccaagag |
27530603 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|| || ||| |||||||| | ||||| | || ||||||| |||| || |||| |||||||| || ||| |||| || |||||||| |||||||||| |
|
|
| T |
27530602 |
aaactccttttaaaaacagttagattggacattaagttaggaggtgttagtcagggaattccaatcattaagcaaaggctatgtagaaagaagattcttt |
27530503 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
27530502 |
tgattcttgatgatgttga |
27530484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 25483849 - 25484058
Alignment:
| Q |
14 |
taattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttctt |
113 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||| |||||| |||||||||||||| ||| ||| ||| |
|
|
| T |
25483849 |
taattttcttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtcataataacctgaaacatctccaaaagatgctcctt |
25483948 |
T |
|
| Q |
114 |
ctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcg |
213 |
Q |
| |
|
||||| | | ||| | |||||||| ||||| ||||||| || ||||| |||||||||||||| | |||||| ||||||||||||||| | | |
|
|
| T |
25483949 |
tcaaaaatagttaaatttgacggtaagttagaagatgttagtgagggaataccaatcataaaggaaagactatctagaaagaagattcttttgattgttg |
25484048 |
T |
|
| Q |
214 |
atgatgttga |
223 |
Q |
| |
|
|||||||||| |
|
|
| T |
25484049 |
atgatgttga |
25484058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 26056720 - 26056921
Alignment:
| Q |
22 |
ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaac |
121 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||| || ||||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
26056720 |
ttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaat |
26056819 |
T |
|
| Q |
122 |
aactgga-ttgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcgatgatgt |
220 |
Q |
| |
|
| | | |||| || ||||||| ||||| ||||||| || |||||||||||||||||||| | |||||| ||||||||||||||||| || ||||| |
|
|
| T |
26056820 |
agttaaatttgacggtc-agttagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgt |
26056918 |
T |
|
| Q |
221 |
tga |
223 |
Q |
| |
|
||| |
|
|
| T |
26056919 |
tga |
26056921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 28787019 - 28787237
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| || |||||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
28787019 |
agcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggag |
28787118 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
||| ||| |||||||| | | ||||||| ||||||| |||| ||||||| ||||| |||||||||||| ||| || ||| |||| ||||| |
|
|
| T |
28787119 |
gtgctccttttaaaaacacttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttt |
28787218 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28787219 |
tgattctcgatgatgttga |
28787237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 26076690 - 26076891
Alignment:
| Q |
22 |
ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaac |
121 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||| || ||||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
26076690 |
ttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaat |
26076789 |
T |
|
| Q |
122 |
aactgga-ttgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcgatgatgt |
220 |
Q |
| |
|
| | | |||| || || |||| ||||| ||||||| || |||||||||||||||||||| | |||||| ||||||||||||||||| || ||||| |
|
|
| T |
26076790 |
agttaaatttgacggtc-agatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgt |
26076888 |
T |
|
| Q |
221 |
tga |
223 |
Q |
| |
|
||| |
|
|
| T |
26076889 |
tga |
26076891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 28781899 - 28782100
Alignment:
| Q |
22 |
ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaac |
121 |
Q |
| |
|
||||||||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |||| ||| ||||| | |
|
|
| T |
28781899 |
ttgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaagc |
28781998 |
T |
|
| Q |
122 |
aactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcgatgatgtt |
221 |
Q |
| |
|
| | | ||||||| ||||||| |||| ||||||| ||||| |||||||||||| ||| || ||| |||| |||||||||||||||||||||| |
|
|
| T |
28781999 |
acttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgtt |
28782098 |
T |
|
| Q |
222 |
ga |
223 |
Q |
| |
|
|| |
|
|
| T |
28782099 |
ga |
28782100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 25511690 - 25511891
Alignment:
| Q |
22 |
ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaac |
121 |
Q |
| |
|
||||||||||||||||| || |||||||||||||| |||| |||||||||||| ||| || ||||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
25511690 |
ttgctgatcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaat |
25511789 |
T |
|
| Q |
122 |
aactgga-ttgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcgatgatgt |
220 |
Q |
| |
|
| | | |||| || || |||| ||||| ||||||| || |||||||||||||||||||| | |||||| ||||||||||||||||| || ||||| |
|
|
| T |
25511790 |
agttaaatttgacggtc-agatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgt |
25511888 |
T |
|
| Q |
221 |
tga |
223 |
Q |
| |
|
||| |
|
|
| T |
25511889 |
tga |
25511891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 27604105 - 27603887
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
27604105 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggag |
27604006 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||| ||| |||||||| | | | |||| ||||||| |||| ||||||| ||| | |||||||||||| ||| | || |||||||||| |
|
|
| T |
27604005 |
gagctccttttaaaaacacttcaacttgaaattaagttaggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaatgaagattcttt |
27603906 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
27603905 |
tgattctcgatgatgttga |
27603887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 28793140 - 28793358
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| || |||||||||||||| | | |||||||||| | |||||||||||| ||||||| ||||| |||||||||||||| ||| |
|
|
| T |
28793140 |
agcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagagttcagcttcaaatagattgaaacatctccaggag |
28793239 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
||| ||| |||||||| | | ||||||| ||||||| |||| ||||||| ||||| |||||||||||| || || ||| |||||||||| |
|
|
| T |
28793240 |
gtgctccttttaaaaacacttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagattcttt |
28793339 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28793340 |
tgattctcgatgatgttga |
28793358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 25580510 - 25580598
Alignment:
| Q |
12 |
tataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| || |||||||||||||||||||| |
|
|
| T |
25580510 |
tataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagatttcaattcttaataacttgaaacatctcca |
25580598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 27610521 - 27610303
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| | | |||||||||| | ||||||||||||||||| || |||||| ||||||||||| || ||| |
|
|
| T |
27610521 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcaggag |
27610422 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||| ||| |||||||| | | | |||| ||||| | |||| ||||||| ||||| |||||||||||| || |||||| ||| |||||| |
|
|
| T |
27610421 |
gagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaaggttcttt |
27610322 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
27610321 |
tgattcttgatgatgttga |
27610303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 27717900 - 27717682
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| | | |||||||||| | ||||||||||||||||| || |||||| ||||||||||| || || |
|
|
| T |
27717900 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcagaag |
27717801 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||| ||| |||||||| | | | |||| ||||| | |||| ||||||| ||||| |||||||||||| || |||||| ||| |||||| |
|
|
| T |
27717800 |
gagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaaggttcttt |
27717701 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
27717700 |
tgattcttgatgatgttga |
27717682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 25492718 - 25492625
Alignment:
| Q |
7 |
caatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||| ||||||| |
|
|
| T |
25492718 |
caatctataacttcattgctgatcaatttgaaggtttatgttttctaggagatgtgagagagaattcaactccaagaaacttgaaagatctcca |
25492625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 27677021 - 27676904
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||||| ||||| ||||||| ||||||||||||| ||||||| || |
|
|
| T |
27677021 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatctccagcag |
27676922 |
T |
|
| Q |
105 |
aagcttcttctaaaaaca |
122 |
Q |
| |
|
|||| ||| |||||||| |
|
|
| T |
27676921 |
gagctccttttaaaaaca |
27676904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 27592422 - 27592305
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||| ||| ||||||||||||||||| | | |||||||||| | |||||| ||||| ||||||| ||||||||||||| ||||||| || |
|
|
| T |
27592422 |
agcaatttataactttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatctccagcag |
27592323 |
T |
|
| Q |
105 |
aagcttcttctaaaaaca |
122 |
Q |
| |
|
|||| ||| |||||||| |
|
|
| T |
27592322 |
gagctccttttaaaaaca |
27592305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 28140316 - 28140388
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagct |
77 |
Q |
| |
|
|||||| ||||||||| |||| |||||||||||| |||| |||||||||||| |||||||||| | ||||||| |
|
|
| T |
28140316 |
agcaatttataattttattgccgatcaatttgaatgtttgtgttttcttcataatgtgagagaaatttcagct |
28140388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 29843389 - 29843280
Alignment:
| Q |
4 |
gagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaaga |
103 |
Q |
| |
|
||||||| |||||||| |||||||| |||||||| |||| ||||||||||| || | |||||| | ||||||| || || ||| | ||||||||||| |
|
|
| T |
29843389 |
gagcaatttataatttgattgctgataaatttgaatgtttgtgttttcttcacgacgggagagaaagttcagctaaacatggcttagagcatctccaaga |
29843290 |
T |
|
| Q |
104 |
gaagcttctt |
113 |
Q |
| |
|
|||||||||| |
|
|
| T |
29843289 |
gaagcttctt |
29843280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 25580646 - 25580721
Alignment:
| Q |
148 |
atgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcgatgatgttga |
223 |
Q |
| |
|
||||| ||||||| ||| |||| || ||||||||||| | |||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
25580646 |
atgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgatttttgatgatgttga |
25580721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 25492576 - 25492502
Alignment:
| Q |
149 |
tgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcgatgatgttga |
223 |
Q |
| |
|
|||| ||||||| ||| |||| ||||| || |||| |||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
25492576 |
tgttagtgagggaattgcaatcataaaacaaggactatgtagagagaagattcttttgattctcgatgatgttga |
25492502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 27215233 - 27215322
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaaca |
94 |
Q |
| |
|
|||||| | |||||| |||||||||| |||||||||| || |||||| | ||||||| |||||||||| || ||||||||||||||| |
|
|
| T |
27215233 |
agcaatttttaatttcattgctgatcagtttgaaggttcatattttctagaagatgtgaaagagaattcaactttaaataacttgaaaca |
27215322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 26824617 - 26824723
Alignment:
| Q |
22 |
ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaac |
121 |
Q |
| |
|
|||||||| ||||||||| ||| ||||||||| | | |||||||||||||||||| | || |||| || ||||||||||| | || ||| ||||||| |
|
|
| T |
26824617 |
ttgctgataaatttgaagttttttgttttcttgagaacgtgagagagaattcagctaagcatggcttggaaaatctccaagagcaactccttttaaaaac |
26824716 |
T |
|
| Q |
122 |
aactgga |
128 |
Q |
| |
|
|| |||| |
|
|
| T |
26824717 |
aattgga |
26824723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 26937809 - 26937866
Alignment:
| Q |
4 |
gagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
61 |
Q |
| |
|
||||||| |||||||| ||| ||||||||||||| |||| |||||||||||| |||| |
|
|
| T |
26937809 |
gagcaatttataatttgattggtgatcaatttgaaagtttgtgttttcttcataatgt |
26937866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 28227740 - 28227805
Alignment:
| Q |
12 |
tataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagct |
77 |
Q |
| |
|
||||||||| | || ||||||||||| ||||| ||||||||||| ||||| || || ||||||||| |
|
|
| T |
28227740 |
tataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagct |
28227805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 29826766 - 29826875
Alignment:
| Q |
4 |
gagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaaga |
103 |
Q |
| |
|
||||||| |||||| | ||| |||| |||||||| | || |||||||||||||| ||||||| | ||||||| || || ||| ||||||||||| | |
|
|
| T |
29826766 |
gagcaatttataatatgattggtgataaatttgaatgcttgtgttttcttcatgacttgagagaaagttcagctaaacatggcttagaacatctccaaca |
29826865 |
T |
|
| Q |
104 |
gaagcttctt |
113 |
Q |
| |
|
|||||||||| |
|
|
| T |
29826866 |
gaagcttctt |
29826875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 26724366 - 26724418
Alignment:
| Q |
22 |
ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattca |
74 |
Q |
| |
|
||||||||||||||||||| || ||||| ||||| |||||||||| |||||| |
|
|
| T |
26724366 |
ttgctgatcaatttgaagggttgtgtttccttcacaatgtgagagaaaattca |
26724418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 29273243 - 29273020
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29273243 |
caagagcaatctataatttttttgctgatcaatttgaagatttatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctcca |
29273144 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
|||||| || ||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| || || ||||||| || ||| |
|
|
| T |
29273143 |
agagaaactccttttaaaaacaactggattggaaattaagttagatcatgttagtgaggggattccaattataaaggagaggctaagtagaaagaaaatt |
29273044 |
T |
|
| Q |
201 |
cttttgattctcgatgatgttgat |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
29273043 |
cttttgattctcgatgatgttgat |
29273020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 267745 - 267525
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||||||||||| |
|
|
| T |
267745 |
caagagcaatctataattttattgctgatcaatttgaaggattatgttttcttcatgatgtgagagaaaattcagctataagtaacttgaaacatctcca |
267646 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| |||| |||||||| |||||| ||||||| |||||||| || |||||||| || |||||||| |||||| |
|
|
| T |
267645 |
agagaagctccttttaaaaacaactggattggaaattaagttagaccatgttagtgagggcattccaatcattaaggaaaggctatgtagaaagaagatt |
267546 |
T |
|
| Q |
201 |
cttttgattctcgatgatgtt |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
267545 |
cttttgattctcgatgatgtt |
267525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 28127076 - 28126861
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| |||| ||| | |||| ||||||||||||||||| |
|
|
| T |
28127076 |
agcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagatttcaactccatataatttgaaacatctccaagaa |
28126977 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
||||| ||| | |||||| ||||||| | || ||||||| |||| ||||||| ||| |||| ||||| |||| || || ||||| |||||||||| |
|
|
| T |
28126976 |
aagctccttttgaaaacagttggattggacattaagttaggaggtgttagtgagggaattgcaatcataaaacaaaggctatgcagaaagaagattcttt |
28126877 |
T |
|
| Q |
205 |
tgattctcgatgatgt |
220 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
28126876 |
tgattcttgatgatgt |
28126861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 28163776 - 28163681
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| | ||||||||||||||||| |
|
|
| T |
28163776 |
agcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctcca |
28163681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 60346 - 60568
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||| ||||| |||||||| | |||| |
|
|
| T |
60346 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttcca |
60445 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
|||| ||| ||| ||| ||| | | ||||||| ||||||| |||| ||||||| || |||| ||||||||||| |||||||||| |||||| |
|
|
| T |
60446 |
ggagatgctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagatt |
60545 |
T |
|
| Q |
201 |
cttttgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
60546 |
cttttgattctcgatgacgttga |
60568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18074538 - 18074760
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||| ||||| |||||||| | |||| |
|
|
| T |
18074538 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttcca |
18074637 |
T |
|
| Q |
101 |
agagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagatt |
200 |
Q |
| |
|
|||| ||| ||| ||| ||| | | ||||||| ||||||| |||| ||||||| || |||| ||||||||||| |||||||||| |||||| |
|
|
| T |
18074638 |
ggagatgctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagatt |
18074737 |
T |
|
| Q |
201 |
cttttgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
18074738 |
cttttgattctcgatgacgttga |
18074760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 18698797 - 18698579
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||||||||||||||||||| |||| | |||||||||||||| ||| |
|
|
| T |
18698797 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggag |
18698698 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
| || ||| |||||||| | | ||||||| ||||||| |||| ||||||| ||||| |||||||||||| ||| || ||| |||||||||| |
|
|
| T |
18698697 |
gaactccttttaaaaacactagcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagattcttt |
18698598 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
18698597 |
tgattctcgatgatgttga |
18698579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 18678957 - 18678742
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||||||||||||||||||| |||| | |||||||||||||| ||| |
|
|
| T |
18678957 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggag |
18678858 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
| || ||| |||||||| | | ||||||| ||||||| |||| ||||||| ||||| |||||||||||| || || ||| |||||||||| |
|
|
| T |
18678857 |
gaactccttttaaaaacactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagattcttt |
18678758 |
T |
|
| Q |
205 |
tgattctcgatgatgt |
220 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
18678757 |
tgattctcgatgatgt |
18678742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 18730894 - 18730683
Alignment:
| Q |
12 |
tataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttc |
111 |
Q |
| |
|
||||||||| ||||||||||||||||| | | |||||||||| | |||||||||||||||||||| |||| | |||||||||||||| ||| | || | |
|
|
| T |
18730894 |
tataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactcc |
18730795 |
T |
|
| Q |
112 |
ttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattct |
211 |
Q |
| |
|
|| |||||||| | | ||||||| ||||||| |||| ||||||| ||||| |||||||||||| || || ||| ||||||||||||||||| |
|
|
| T |
18730794 |
ttttaaaaacactagcactgaaaattaagttaggaggtgttagtgagggaattccctatataaaggaaaggctacatacaaagaagattcttttgattct |
18730695 |
T |
|
| Q |
212 |
cgatgatgttga |
223 |
Q |
| |
|
|||||||||||| |
|
|
| T |
18730694 |
cgatgatgttga |
18730683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 18654866 - 18654659
Alignment:
| Q |
13 |
ataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttct |
112 |
Q |
| |
|
|||||| | ||||||||||||||||| | | |||||||||| | |||||||||| |||||| || |||| | |||||||||||||| ||| | || || |
|
|
| T |
18654866 |
ataattgtattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagaaaattcatcttcaaatcaattgaaacatctccaggaggaactcct |
18654767 |
T |
|
| Q |
113 |
tctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctc |
212 |
Q |
| |
|
| |||||||| | | ||||||| ||||||| |||| ||||||| ||||| |||||||||||| || || ||| |||||||||||||||||| |
|
|
| T |
18654766 |
tttaaaaacactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagattcttttgattctc |
18654667 |
T |
|
| Q |
213 |
gatgatgt |
220 |
Q |
| |
|
|||||||| |
|
|
| T |
18654666 |
gatgatgt |
18654659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 18723475 - 18723264
Alignment:
| Q |
12 |
tataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttc |
111 |
Q |
| |
|
||||||||| ||||||||||||||||| | | |||||||||| | | |||||||||||||||||| |||| | |||||||||||||| ||| | || | |
|
|
| T |
18723475 |
tataattttattgctgatcaatttgaatgctcatgttttcttgaaaacgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactcc |
18723376 |
T |
|
| Q |
112 |
ttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattct |
211 |
Q |
| |
|
|| |||||||| | | ||||||| || |||| |||| ||||| | ||||| ||||||| |||| || || ||| ||||||||||||||||| |
|
|
| T |
18723375 |
ttttaaaaacactttcactgaaaattaacttaggaggtgttagtgagagaattccttatataaagaaaaggctacatacaaagaagattcttttgattct |
18723276 |
T |
|
| Q |
212 |
cgatgatgttga |
223 |
Q |
| |
|
|||||||||||| |
|
|
| T |
18723275 |
cgatgatgttga |
18723264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 8268 - 8486
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| || |||||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
8268 |
agcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggag |
8367 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
| || ||| |||||||| | | ||||| ||||||| |||| ||||||| ||||| |||||||||||| ||| || ||| |||| ||||| |
|
|
| T |
8368 |
gaactccttttaaaaacacttcaacagaaaactaagttaggaagtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttt |
8467 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8468 |
tgattctcgatgatgttga |
8486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 4113 - 3895
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| |||||||| |||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
4113 |
agcaatttataattttattgctgatgaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggag |
4014 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
|||| ||| |||||||| | | | |||| ||||||| |||| ||||||| ||| | |||||||||||| ||| | ||| |||||||||| |
|
|
| T |
4013 |
gagctccttttaaaaacacttcaacttgaaattaagttaggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaagattcttt |
3914 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
3913 |
tgattctcgatgatgttga |
3895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 13076 - 12858
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagag |
104 |
Q |
| |
|
|||||| ||||||||| || |||||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
13076 |
agcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggag |
12977 |
T |
|
| Q |
105 |
aagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttt |
204 |
Q |
| |
|
| || ||| |||||||| | | ||||| ||||||| |||| ||||||| ||||| |||||||||||| ||| || ||| |||| ||||| |
|
|
| T |
12976 |
gaactccttttaaaaacacttcaacagaaaactaagttaggaagtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttt |
12877 |
T |
|
| Q |
205 |
tgattctcgatgatgttga |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
12876 |
tgattctcgatgatgttga |
12858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 2940 - 2848
Alignment:
| Q |
5 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatct |
97 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
2940 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatct |
2848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 16691647 - 16691869
Alignment:
| Q |
4 |
gagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaaga |
103 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| |||| |||||||||||||| |||||||| |||||| || || || ||| ||||||| ||||| |
|
|
| T |
16691647 |
gagcaatttataatttgattgctgatcaatttgaatgtttgtgttttcttcatgacgtgagagaaaattcatctaaacatggcttagaacatcttcaaga |
16691746 |
T |
|
| Q |
104 |
gaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattctt |
203 |
Q |
| |
|
| ||| ||| ||||| | |||||| | || ||||||| |||||| |||| || |||||||| ||||| |||| || ||| ||| ||||| |
|
|
| T |
16691747 |
aaggctcctttccaaaaccattggattagacattaagttaggacatgttagtgaaggaattccaataataaaacaaaggctacaacaaaaaaaggttctt |
16691846 |
T |
|
| Q |
204 |
ttgattctcgatgatgttgatga |
226 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
16691847 |
ttgattctcgatgatgttgatga |
16691869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3280436 - 3280511
Alignment:
| Q |
1 |
caagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagc |
76 |
Q |
| |
|
|||||||| | |||||||| ||||| ||||||||||| || ||||||||||||| |||||||||| |||||||| |
|
|
| T |
3280436 |
caagagcagtttataatttcattgctaatcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattcagc |
3280511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 28238 - 28303
Alignment:
| Q |
12 |
tataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagct |
77 |
Q |
| |
|
||||||||| | || ||||||||||| ||||| ||||||||||| ||||| || || ||||||||| |
|
|
| T |
28238 |
tataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagct |
28303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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