View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9594_1 (Length: 966)
Name: NF9594_1
Description: NF9594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9594_1 |
 | |
|
| [»] scaffold0005 (2 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 876; Significance: 0; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 876; E-Value: 0
Query Start/End: Original strand, 21 - 946
Target Start/End: Complemental strand, 42473311 - 42472387
Alignment:
| Q |
21 |
attgatgtgcaaaaatcagatcaaattaagaagaatcgagtatgtctcaagacttcgattgacattgttcgtaatttaacacttcaagatgttgatttta |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42473311 |
attgatgtgcaaaaatcagatcaaattaagaagaatcgagtatgtctcaagacttcgattgacattgttcgtaatttaacacttcaagatgttgatttta |
42473212 |
T |
|
| Q |
121 |
gtcgtgatggtgaaactagagaagcaagacaccaagatgcttttctgtcaatggcaaaggttgcagcaaaatatgatgatgaatttgccaaagttgtgct |
220 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42473211 |
gtcgtgatggtgaaactagcgaagcaagacaccaagatgcttttctgtcaatggcaaaggttgcagcaaaatatgatgatgaatttgccaaagttgtgct |
42473112 |
T |
|
| Q |
221 |
ggaaaatggcccatatctttctaggtgtgcttcatttcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaa |
320 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42473111 |
ggaaaatggcccatatctttctagttgtgcttcatttcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaa |
42473012 |
T |
|
| Q |
321 |
attggtgattccaaattttgcatagttgttgatggagtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggtt |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42473011 |
attggtgattccaaattttgcatagttgttgatggagtttgtgatggaccacaaaaggaacaaatggctcttgttttgagatttgttgataaaaatggtt |
42472912 |
T |
|
| Q |
421 |
ttatacaagagcggnnnnnnngatattgtgcatgttaaagactttgagccatcagaggaagaaatttacgctatactttctcgacacaatcttgatgttt |
520 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42472911 |
ttatacaagagcggtttttt-gatattgtgcatgttaaagactttgagccatcagaggaagaaatttacgctatactttctcgacacaatcttgatgttt |
42472813 |
T |
|
| Q |
521 |
ctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacactaattttgaatgaatgtccttatgcatacca |
620 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42472812 |
ctaatattcgtggtcaagggtatgatggcactagcgatatgagagaacaatggaatagtttgcagacactaattttgaatgaatgtccttatgcatacca |
42472713 |
T |
|
| Q |
621 |
cattcattgttttgaacataagttgcaacctgccttggtttgtgcatcgtcagaagtttttccaattcaacaattcttttcaaagttgacttctattgtc |
720 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42472712 |
cattcattgttttgaacataagttgcaacctgccttggtttgtgcatcgtcagaagtttttccaattcaacaattcttttcaaagttgacttctattgtc |
42472613 |
T |
|
| Q |
721 |
aattttttcaattcttgtagtaagccccatgatgagtcgctagctgccaagttaaatgaaatcgcacatttgctagagatcagtgaaattggcgaagggg |
820 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42472612 |
aattttttcaattcttgtagtaagccccatgatgagtcgctagctgccaagttaaatgaaatcgcacatttgctagagatcagtgaaattggcgaagggg |
42472513 |
T |
|
| Q |
821 |
caaatcaaattggtagtttacaaagagttggagatacttgtttgaggtcacatttttcttctatttgtagcttgataaggatgtacgatacaacttgttt |
920 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42472512 |
caaatcaaattggtagtttacaaagagttggagatacttgtttgaggtcacatttttcttctatttgtagcttgataaggatgtacgatacaacttgttc |
42472413 |
T |
|
| Q |
921 |
gattcttaaaaaacttgctgatgatg |
946 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
42472412 |
gattcttaaaaaacttgctgatgatg |
42472387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 223 - 802
Target Start/End: Complemental strand, 42480367 - 42479777
Alignment:
| Q |
223 |
aaaatggcccatatctttctaggtgtgcttcatttcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaat |
322 |
Q |
| |
|
||||||||| ||||||| | |||||||||| |||||||||||||||||||||||| || |||||| | ||||||||| ||||| || |||||||| |
|
|
| T |
42480367 |
aaaatggccaatatcttgacaagtgtgcttcacttcaatttcgaaaagagatcttgcgagttgtttctagtcaagtgaaaaaccatatccgtgaggaaat |
42480268 |
T |
|
| Q |
323 |
tggtgattccaaattttgcatagttgttgatggagtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggtttt |
422 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| | |||| | || ||||||||| ||||| |||||||||||||||||||||||||| || ||| |
|
|
| T |
42480267 |
tggtgattccaaattttgtatagttgttgatggagctcttgataaatcaggaaaggaacaaatggcccttgttttgagatttgttgataaaaaggggttt |
42480168 |
T |
|
| Q |
423 |
atacaagagcggnnnnnnngatattgtgcatgttaaagac------tttgagccatcag------aggaagaaatttacgctatactttctcgacacaat |
510 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||| ||| | ||||| || ||| ||||||||||||| || ||| |
|
|
| T |
42480167 |
atacaagagcggttgttt-gatattgtgcatgttaaagacattaattttgaggtatccgctcttaaggaacaagtttgtgctatactttctcagcataat |
42480069 |
T |
|
| Q |
511 |
cttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacactaattttgaatgaatgtcctt |
610 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||| || ||||| |||||||||||||||||| |
|
|
| T |
42480068 |
cttgatgtttctaacattcgtggtcaagggtatgatggtacctgcgaaatgagagaacaatggaatggtttacatgcactatttttgaatgaatgtcctt |
42479969 |
T |
|
| Q |
611 |
atgcataccacattcattgttttgaacataagttgcaacctgccttggtttgtgcatcgtcagaagtttttccaattcaacaattcttttcaaagttgac |
710 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| | | |||||||| | |||| |
|
|
| T |
42479968 |
ctgcatatcacattcattgttttgctcataagttgcaatctgccttggtttgtgcatcgtcagaagttactccaatttacctgttcttttctgaattgaa |
42479869 |
T |
|
| Q |
711 |
ttctattgtcaattttttcaattcttgtagtaagccccatgatgagtcgctagctgccaagttaaatgaaatcgcacatttgctagagatca |
802 |
Q |
| |
|
||||||||| |||||||| || ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||||||| |||||| |
|
|
| T |
42479868 |
ttctattgtagattttttctcttgttgtagtaagccccatgatgagttacttgctgccaagttagatgaaattgcacatttgctaaagatca |
42479777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 490 - 668
Target Start/End: Complemental strand, 42467524 - 42467346
Alignment:
| Q |
490 |
gctatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacac |
589 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||||| | || || ||| |
|
|
| T |
42467524 |
gctatactttctcgacataatcttgatgtttctaacattcgtggtcaaggttatgacggtacctgcgatatgagagaacaatggaatggcttacaagcac |
42467425 |
T |
|
| Q |
590 |
taattttgaatgaatgtccttatgcataccacattcattgttttgaacataagttgcaacctgccttggtttgtgcatc |
668 |
Q |
| |
|
|| |||||||| ||||||||| ||||||| ||||||| ||||||| |||||||||| | | |||||||||| ||||||| |
|
|
| T |
42467424 |
tatttttgaatcaatgtccttctgcatactacattcactgttttgcacataagttggatcttgccttggttggtgcatc |
42467346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 246 - 428
Target Start/End: Complemental strand, 42467750 - 42467568
Alignment:
| Q |
246 |
tgtgcttcatttcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatag |
345 |
Q |
| |
|
||||||||||||| ||||| |||| | ||||||||| ||||| ||| || |||||||| ||||| || || |||||||||||||||||||||||||| | |
|
|
| T |
42467750 |
tgtgcttcatttccatttcaaaaacacatcttgcatgttcttgctagtagagtgaaaaagcatatccgtgacgaaattggtgattccaaattttgcattg |
42467651 |
T |
|
| Q |
346 |
ttgttgatggagtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaa |
428 |
Q |
| |
|
|| | ||||||| ||| ||| | ||||| | ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |
|
|
| T |
42467650 |
ttctggatggagcttgggataaatcacaatatgaacaaatgcctcttattttgagatttgttcataaaaatggttttacacaa |
42467568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 266 - 413
Target Start/End: Original strand, 33362082 - 33362229
Alignment:
| Q |
266 |
aaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatggagtttgtgat |
365 |
Q |
| |
|
||||||||| ||||| |||||||||| || |||| || |||||||| || |||||||||||||| ||||||||||| || ||||||| || | ||||| |
|
|
| T |
33362082 |
aaaagagatattgcaaattctttctagtagggtgagaaaacatattcgtgaagaaattggtgattctaaattttgcatcgtcgttgatgaagctcgtgat |
33362181 |
T |
|
| Q |
366 |
ggaccacaaaaggaacacatggctcttgttttgagatttgttgataaa |
413 |
Q |
| |
|
| || |||||||||| ||||||||||| || || |||||||||||| |
|
|
| T |
33362182 |
gagtcaaaaaaggaacaaatggctcttgtgttaaggtttgttgataaa |
33362229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 492 - 581
Target Start/End: Original strand, 33362311 - 33362400
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagttt |
581 |
Q |
| |
|
||||||||||||||| || ||||||||||| ||||||||||||||||||||||| || ||||| ||||||||| | |||||||| |||| |
|
|
| T |
33362311 |
tatactttctcgacataaccttgatgtttcaaacattcgtggtcaagggtatgacggtgctagaaatatgagaggagaatggaatggttt |
33362400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 66; Significance: 1e-28; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 492 - 757
Target Start/End: Original strand, 5087402 - 5087667
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |||||||| |||| || |||| |
|
|
| T |
5087402 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgatggtgctagcaatatgagaggagaatggaattgtttacaagcactt |
5087501 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgcataccacattcattgttttgaacataagttgcaacctgccttggtttgtgcatcgtcagaagtttttccaattcaac |
691 |
Q |
| |
|
|| |||| || ||||||||||| ||| | | |||||||||| ||| |||||||| |||||| ||| |||||| ||||||| ||||||| | |
|
|
| T |
5087502 |
tttatgaaagattgtccttatgcttactatgtccattgttttgctcatcggttgcaacttgccttagttactgcatcaagagaagttacatcaattcatc |
5087601 |
T |
|
| Q |
692 |
aattcttttcaaagttgacttctattgtcaattttttcaattcttgtagtaagccccatgatgagt |
757 |
Q |
| |
|
|||||||| |||||| ||| | |||||||| || | ||||| || ||||| ||||||||||| |
|
|
| T |
5087602 |
aattctttgagaagttggcttttgttgtcaatgttgttggttcttctactaagcgccatgatgagt |
5087667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 257 - 433
Target Start/End: Original strand, 43523802 - 43523978
Alignment:
| Q |
257 |
tcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatgga |
356 |
Q |
| |
|
|||| ||| ||||||| ||||| |||||||||| || |||||||| ||||| || |||||||||||||||||||| ||||| || |||| |||| | |
|
|
| T |
43523802 |
tcaagttcaaaaagagctcttggcaattctttctagtagagtgaaaaaacatatccgtgaggaaattggtgattccaagttttgtatcattgtagatgaa |
43523901 |
T |
|
| Q |
357 |
gtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagagcg |
433 |
Q |
| |
|
| | | |||| ||||||||||||| ||||||||||| || ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
43523902 |
gctcgcgatgagtcacaaaaggaacaaatggctcttgtgttaagatttgttgataaagatggtttaatacaagagcg |
43523978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 492 - 660
Target Start/End: Original strand, 43524041 - 43524209
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| | ||||||| |||| || || | |
|
|
| T |
43524041 |
tatactttctcgacataaccttgatgtttctaaccttcgtggtcaagggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagcattg |
43524140 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgcataccacattcattgttttgaacataagttgcaacctgccttggtt |
660 |
Q |
| |
|
|| |||| || ||||||||||||||| |||| |||||||||| |||| || |||| |||||||||| |
|
|
| T |
43524141 |
tttatgaaggattgtccttatgcatactacatccattgttttgctcatagattacaacttgccttggtt |
43524209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 257 - 431
Target Start/End: Original strand, 5087162 - 5087336
Alignment:
| Q |
257 |
tcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatgga |
356 |
Q |
| |
|
|||| ||| ||||||| | ||||| |||||||||| || ||| || |||||||| || |||||||||||||| ||||||||||| |||||||||| | |
|
|
| T |
5087162 |
tcaaattcaaaaagagcttttgcaaattctttctagtagggtgggaaaacatattcgtgaagaaattggtgattctaaattttgcatcgttgttgatgaa |
5087261 |
T |
|
| Q |
357 |
gtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagag |
431 |
Q |
| |
|
| | |||||| || |||||||||| ||||||||||| || ||||||||||||||| |||||| ||||||||| |
|
|
| T |
5087262 |
gctcgtgatgagtcaaaaaaggaacaaatggctcttgtgttaagatttgttgataaagctggtttgatacaagag |
5087336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 65; Significance: 5e-28; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 257 - 433
Target Start/End: Complemental strand, 23122644 - 23122468
Alignment:
| Q |
257 |
tcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatgga |
356 |
Q |
| |
|
|||| ||| ||||||| ||||| | |||||||||| || |||||||| |||||||| |||||||||||||||||||| ||||| || |||| |||| | |
|
|
| T |
23122644 |
tcaagttcaaaaagagctcttggaaattctttctagtagagtgaaaaaacatattcgtgaggaaattggtgattccaagttttgtatcattgtagatgaa |
23122545 |
T |
|
| Q |
357 |
gtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagagcg |
433 |
Q |
| |
|
| | | |||| ||||||||||||| |||||||| || || ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
23122544 |
gctcgcgatgagtcacaaaaggaacaaatggctctggtgttaagatttgttgataaagatggtttaatacaagagcg |
23122468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 257 - 433
Target Start/End: Original strand, 14008046 - 14008222
Alignment:
| Q |
257 |
tcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatgga |
356 |
Q |
| |
|
|||| ||| ||||||| ||||| |||||||||| || |||||||| ||||| || |||||||||||||||||||| ||||| || |||| |||| | |
|
|
| T |
14008046 |
tcaagttcaaaaagagctcttggcaattctttctagtagagtgaaaaaacatatccgtgaggaaattggtgattccaagttttgtatcattgtagatgaa |
14008145 |
T |
|
| Q |
357 |
gtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagagcg |
433 |
Q |
| |
|
| | | |||| ||||||||||||| ||||||||||| || ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
14008146 |
gctcgcgatgagtcacaaaaggaacaaatggctcttgtgttaagatttgttgataaagatggtttaatacaagagcg |
14008222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 492 - 614
Target Start/End: Complemental strand, 22271733 - 22271611
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| ||||||||| | |||||||| |||| || |||| |
|
|
| T |
22271733 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcactt |
22271634 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgc |
614 |
Q |
| |
|
|| |||| || ||||||||||| |
|
|
| T |
22271633 |
tttatgaaagattgtccttatgc |
22271611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 492 - 634
Target Start/End: Complemental strand, 23122404 - 23122262
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| | ||||||| |||| || || | |
|
|
| T |
23122404 |
tatactttctcgacataaccttgatgtttctaaccttcgtggtcaagggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagcattg |
23122305 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgcataccacattcattgttttg |
634 |
Q |
| |
|
|| |||| || ||||||||||||||| |||| |||||||||| |
|
|
| T |
23122304 |
tttatgaaggattgtccttatgcatactacatccattgttttg |
23122262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 492 - 660
Target Start/End: Original strand, 14008286 - 14008454
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||||||||||| |||||||||| || ||| ||||||||| | ||||||| |||| || || | |
|
|
| T |
14008286 |
tatactttctcgacataaccttgatgtttctaaccttcgtggtcaatggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagcattg |
14008385 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgcataccacattcattgttttgaacataagttgcaacctgccttggtt |
660 |
Q |
| |
|
|| |||| || ||||||||||||||| |||| |||||||||| |||| || |||| |||||||||| |
|
|
| T |
14008386 |
tttatgaaggattgtccttatgcatactacatccattgttttgctcatagattacaacttgccttggtt |
14008454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 266 - 431
Target Start/End: Complemental strand, 22271964 - 22271799
Alignment:
| Q |
266 |
aaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatggagtttgtgat |
365 |
Q |
| |
|
||||||||| ||||| |||||||||| || |||| || |||||| | || |||||||||||||| |||||||| || | ||||||| || | ||||| |
|
|
| T |
22271964 |
aaaagagatattgcaaattctttctagtagggtgagaaaacatatttgtgaagaaattggtgattctaaattttgtatcatcgttgatgaagctcgtgat |
22271865 |
T |
|
| Q |
366 |
ggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagag |
431 |
Q |
| |
|
| || |||||||||| ||||||||||| || || |||||||||||| |||||| ||||||||| |
|
|
| T |
22271864 |
gagtcaaaaaaggaacaaatggctcttgtgttaaggtttgttgataaagctggtttgatacaagag |
22271799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 62; Significance: 3e-26; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 266 - 431
Target Start/End: Original strand, 40924119 - 40924284
Alignment:
| Q |
266 |
aaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatggagtttgtgat |
365 |
Q |
| |
|
||||||||| ||||| |||||||||| || |||| || |||||||| || |||||||||||||| ||||||||||| || ||||||| || ||||||| |
|
|
| T |
40924119 |
aaaagagatattgcaaattctttctagtagggtgagaaaacatattcgtgaagaaattggtgattctaaattttgcatcgtcgttgatgaagcttgtgat |
40924218 |
T |
|
| Q |
366 |
ggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagag |
431 |
Q |
| |
|
| || |||||||||| ||||||||||| || || |||||||||||| |||||| ||||||||| |
|
|
| T |
40924219 |
gagtcaaaaaaggaacaaatggctcttgtgttaaggtttgttgataaagctggtttgatacaagag |
40924284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 492 - 614
Target Start/End: Original strand, 2735304 - 2735426
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| ||||||||| | |||||||| |||| || |||| |
|
|
| T |
2735304 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcactt |
2735403 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgc |
614 |
Q |
| |
|
|| |||| || ||||||||||| |
|
|
| T |
2735404 |
tttatgaaagattgtccttatgc |
2735426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 492 - 614
Target Start/End: Original strand, 40924350 - 40924472
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| ||||||||| | |||||||| |||| || |||| |
|
|
| T |
40924350 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcactt |
40924449 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgc |
614 |
Q |
| |
|
|| |||| || ||||||||||| |
|
|
| T |
40924450 |
tttatgaaagattgtccttatgc |
40924472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 266 - 431
Target Start/End: Original strand, 2735073 - 2735238
Alignment:
| Q |
266 |
aaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatggagtttgtgat |
365 |
Q |
| |
|
||||||||| ||||| |||||||||| || |||| || |||||||| || |||||||||||||| |||||||| || || ||||||| || | ||||| |
|
|
| T |
2735073 |
aaaagagatattgcaaattctttctagtagggtgagaaaacatattcgtgaagaaattggtgattctaaattttgtatcgtcgttgatgaagctcgtgat |
2735172 |
T |
|
| Q |
366 |
ggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagag |
431 |
Q |
| |
|
| || ||||| |||| ||||||||||| || || |||||||||||| |||||| ||||||||| |
|
|
| T |
2735173 |
gagtcaaaaaagaaacaaatggctcttgtgttaaggtttgttgataaagctggtttgatacaagag |
2735238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 492 - 614
Target Start/End: Complemental strand, 22127904 - 22127782
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
|||||||| |||||| || |||| |||||||||||| |||||||||||||||| || |||||| ||||||||| | |||||||| |||| || ||||| |
|
|
| T |
22127904 |
tatactttttcgacataactttgacgtttctaacatttgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcacta |
22127805 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgc |
614 |
Q |
| |
|
|| |||| || ||||||||||| |
|
|
| T |
22127804 |
tttatgaaagattgtccttatgc |
22127782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 492 - 634
Target Start/End: Complemental strand, 22511007 - 22510865
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||| ||||||||||||| |||| || ||| ||||||||| | ||||||| |||| || || | |
|
|
| T |
22511007 |
tatactttctcgacataaccttgatgtttctaaccttcatggtcaagggtataatggtgcaagcaatatgagaggagaatggaacggtttacaagcattg |
22510908 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgcataccacattcattgttttg |
634 |
Q |
| |
|
|| |||| || |||||||||||||| |||| |||||||||| |
|
|
| T |
22510907 |
tttatgaaggatcgtccttatgcatactacatccattgttttg |
22510865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 22511134 - 22511071
Alignment:
| Q |
370 |
cacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagagcg |
433 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
22511134 |
cacaaaaggaacaaatggctcttgtgttaagatttgttgataaagatggtttaatacaagagcg |
22511071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 61; Significance: 1e-25; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 257 - 433
Target Start/End: Original strand, 41595195 - 41595371
Alignment:
| Q |
257 |
tcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatgga |
356 |
Q |
| |
|
|||| ||| ||||||| ||||| |||||||||| || |||||||| ||||| || |||||||||||||||||||| ||||| || |||| |||| | |
|
|
| T |
41595195 |
tcaagttcaaaaagagctcttggcaattctttctagtagagtgaaaaaacatatccgtgaggaaattggtgattccaagttttgtatcattgtagatgaa |
41595294 |
T |
|
| Q |
357 |
gtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagagcg |
433 |
Q |
| |
|
| | | |||| ||||||||||||| ||||||||||| || ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
41595295 |
gctcgcgatgagtcacaaaaggaacaaatggctcttgtgttaagatttgttgataaagatggtttaatacaagagcg |
41595371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 492 - 660
Target Start/End: Original strand, 41595435 - 41595603
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| | ||||||| |||| || || | |
|
|
| T |
41595435 |
tatactttctcgacataaccttgatgtttctaaccttcgtggtcaagggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagcattg |
41595534 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgcataccacattcattgttttgaacataagttgcaacctgccttggtt |
660 |
Q |
| |
|
|| |||| || ||||||||||||||| |||| |||||||||| |||| || |||| |||||||||| |
|
|
| T |
41595535 |
tttatgaaggattgtccttatgcatactacatccattgttttgctcatagattacaacttgccttggtt |
41595603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 492 - 614
Target Start/End: Original strand, 31420673 - 31420795
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| ||||||||| | |||||||| |||| || |||| |
|
|
| T |
31420673 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcactt |
31420772 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgc |
614 |
Q |
| |
|
|| |||| || ||||||||||| |
|
|
| T |
31420773 |
tttatgaaagattgtccttatgc |
31420795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 266 - 431
Target Start/End: Original strand, 31420442 - 31420607
Alignment:
| Q |
266 |
aaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatggagtttgtgat |
365 |
Q |
| |
|
||||||||| || || |||||||||| || |||| || |||||||| || |||||||||||||| ||||||||||| || ||||||| || | ||||| |
|
|
| T |
31420442 |
aaaagagatattacaaattctttctagtagggtgagaaaacatattcgtgaagaaattggtgattctaaattttgcatcgtcgttgatgaagctcgtgat |
31420541 |
T |
|
| Q |
366 |
ggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagag |
431 |
Q |
| |
|
| || |||||||||| ||||||||||| || || |||||||||||| |||||| ||||||||| |
|
|
| T |
31420542 |
gagtcaaaaaaggaacaaatggctcttgtgttaaggtttgttgataaagctggtttgatacaagag |
31420607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 2e-24; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 492 - 614
Target Start/End: Original strand, 95976 - 96098
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagtttgcagacacta |
591 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| ||||||||| | |||||||| |||| || |||| |
|
|
| T |
95976 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcactt |
96075 |
T |
|
| Q |
592 |
attttgaatgaatgtccttatgc |
614 |
Q |
| |
|
|| |||| || ||||||||||| |
|
|
| T |
96076 |
tttatgaaagattgtccttatgc |
96098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 333 - 431
Target Start/End: Original strand, 95812 - 95910
Alignment:
| Q |
333 |
aaattttgcatagttgttgatggagtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagag |
431 |
Q |
| |
|
||||||||||| |||||||||| || | |||||| || |||||||||| |||||| |||| || ||||||||||||||| |||||| || |||||| |
|
|
| T |
95812 |
aaattttgcatcgttgttgatgaagctcgtgatgagtcaaaaaaggaacaaatggctattgtgttaagatttgttgataaagctggtttgatgcaagag |
95910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 529
Target Start/End: Original strand, 9303551 - 9303588
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattc |
529 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
9303551 |
tatactttctcgacataaccttgatgtttctaacattc |
9303588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 58; Significance: 7e-24; HSPs: 2)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 266 - 431
Target Start/End: Original strand, 40944 - 41109
Alignment:
| Q |
266 |
aaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatggagtttgtgat |
365 |
Q |
| |
|
||||||||| || || |||||||||| || |||| || |||||||| || |||||||||||||| ||||||||||| || ||||||| || ||||||| |
|
|
| T |
40944 |
aaaagagatatttcaaattctttctagtagggtgagaaaacatattcgtgaagaaattggtgattctaaattttgcatcgtcgttgatgaagcttgtgat |
41043 |
T |
|
| Q |
366 |
ggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagag |
431 |
Q |
| |
|
| || |||||||||| ||||||||||| || || |||||||||||| |||||| ||||||||| |
|
|
| T |
41044 |
gagtcaaaaaaggaacaaatggctcttgtgttaaggtttgttgataaagctggtttgatacaagag |
41109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 492 - 581
Target Start/End: Original strand, 41175 - 41264
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagttt |
581 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| ||||||||| | |||||||| |||| |
|
|
| T |
41175 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggttt |
41264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 58; Significance: 7e-24; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 492 - 581
Target Start/End: Complemental strand, 14798553 - 14798464
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagttt |
581 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| ||||||||| | |||||||| |||| |
|
|
| T |
14798553 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggttt |
14798464 |
T |
|
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Target: chr4; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 266 - 431
Target Start/End: Complemental strand, 14798784 - 14798619
Alignment:
| Q |
266 |
aaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatggagtttgtgat |
365 |
Q |
| |
|
||||||||| || || |||||||||| || |||| || |||||||| || |||||||||||||| ||||||||||| || ||||||| || | ||||| |
|
|
| T |
14798784 |
aaaagagatattacaaattctttctagtagggtgagaaaacatattcgtgaagaaattggtgattctaaattttgcatcgtcgttgatgaagctcgtgat |
14798685 |
T |
|
| Q |
366 |
ggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttatacaagag |
431 |
Q |
| |
|
| || |||||||||| ||||||||||| || || |||||||||||| |||||| ||||||||| |
|
|
| T |
14798684 |
gagtcaaaaaaggaacaaatggctcttgtgttaaggtttgttgataaagctggtttgatacaagag |
14798619 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 54; Significance: 2e-21; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 492 - 581
Target Start/End: Original strand, 27132123 - 27132212
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagttt |
581 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||| || ||| || ||||||||| | |||||||| |||| |
|
|
| T |
27132123 |
tatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctggcaatatgagaggagaatggaatggttt |
27132212 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 266 - 427
Target Start/End: Original strand, 27129722 - 27129882
Alignment:
| Q |
266 |
aaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatggagtttgtgat |
365 |
Q |
| |
|
||||||||| ||||| |||||||||| || |||| || |||||||| || |||||||||||||| ||||||||||| |||||||||| || | ||||| |
|
|
| T |
27129722 |
aaaagagatattgcaaattctttctagtagggtgagaaaacatattcgtgaagaaattggtgattctaaattttgcatcgttgttgatgaagctcgtgat |
27129821 |
T |
|
| Q |
366 |
ggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttataca |
427 |
Q |
| |
|
| || |||||||||| ||||||| ||| || || |||||||||||| |||||| ||||| |
|
|
| T |
27129822 |
gagtcaaaaaaggaacaaatggctcctgtgtt-aggtttgttgataaagctggtttgataca |
27129882 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 257 - 427
Target Start/End: Complemental strand, 11054110 - 11053942
Alignment:
| Q |
257 |
tcaatttcgaaaagagatcttgcatattctttctaataaagtgaaaagtcatattcgcgaggaaattggtgattccaaattttgcatagttgttgatgga |
356 |
Q |
| |
|
|||| ||| ||||||| ||||| | |||||||||| || |||| || ||||||| || |||||||||||||| ||||||||||| |||||||||| | |
|
|
| T |
11054110 |
tcaaattcaaaaagagctcttgtaaattctttctagtagggtgagaaaatatattcgtgaagaaattggtgattctaaattttgcatcgttgttgatgaa |
11054011 |
T |
|
| Q |
357 |
gtttgtgatggaccacaaaaggaacacatggctcttgttttgagatttgttgataaaaatggttttataca |
427 |
Q |
| |
|
| ||||| || |||||||||| ||||||| || || ||||||||||||||| |||||||||||| |
|
|
| T |
11054010 |
actcatgatgagtcaaaaaaggaacaaatggctc--gtgttaagatttgttgataaagctggttttataca |
11053942 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 581
Target Start/End: Original strand, 25535945 - 25536034
Alignment:
| Q |
492 |
tatactttctcgacacaatcttgatgtttctaacattcgtggtcaagggtatgatggcgctagcgatatgagagaacaatggaatagttt |
581 |
Q |
| |
|
|||||||||| |||| || |||||||||||||||| |||||| ||| ||||||| || | ||| ||||||||| | |||||||| |||| |
|
|
| T |
25535945 |
tatactttctagacataaccttgatgtttctaacaatcgtggccaatggtatgaaggtgttagtaatatgagaggagaatggaatggttt |
25536034 |
T |
|
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