View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9595A_high_20 (Length: 345)
Name: NF9595A_high_20
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9595A_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 1676552 - 1676419
Alignment:
| Q |
143 |
aaaagtaaatatgtgatgataatcacaaaaaattactatttttcaaaaacaaacaacatatttaaaagataattataaacatggcttataactgggagtt |
242 |
Q |
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| T |
1676552 |
aaaagtaaatatgtgatgatgatcacaaaaaattactatttttcaaaaacaaacaacatattttaaagataattataaacatggcttataactgggagtt |
1676453 |
T |
|
| Q |
243 |
gggtcttacccatctcgaggttgttcatttcagt |
276 |
Q |
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| T |
1676452 |
gggtcttacccatctcgaggttgttcttttcagt |
1676419 |
T |
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