View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9595A_high_3 (Length: 547)

Name: NF9595A_high_3
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9595A_high_3
NF9595A_high_3
[»] chr5 (40 HSPs)
chr5 (28-533)||(19437952-19438457)
chr5 (412-462)||(10022625-10022675)
chr5 (405-462)||(6326313-6326370)
chr5 (405-462)||(12927640-12927697)
chr5 (405-452)||(7175045-7175092)
chr5 (405-462)||(3966489-3966546)
chr5 (429-462)||(6471905-6471938)
chr5 (393-462)||(12264845-12264914)
chr5 (425-462)||(18421857-18421894)
chr5 (405-462)||(27144449-27144506)
chr5 (429-462)||(28588690-28588723)
chr5 (401-462)||(31084305-31084366)
chr5 (430-462)||(24273046-24273078)
chr5 (430-462)||(24389136-24389168)
chr5 (418-462)||(27932234-27932278)
chr5 (430-461)||(21194222-21194253)
chr5 (419-462)||(23016005-23016048)
chr5 (272-335)||(35095869-35095932)
chr5 (273-360)||(37063161-37063248)
chr5 (424-462)||(17593738-17593776)
chr5 (424-462)||(30502404-30502442)
chr5 (424-462)||(30542747-30542785)
chr5 (432-462)||(41091273-41091303)
chr5 (405-462)||(5467994-5468051)
chr5 (429-462)||(6247632-6247665)
chr5 (401-462)||(11685921-11685982)
chr5 (405-462)||(14674255-14674312)
chr5 (429-462)||(21191072-21191105)
chr5 (429-462)||(21576761-21576794)
chr5 (405-462)||(30098312-30098369)
chr5 (429-462)||(35017047-35017080)
chr5 (405-462)||(39698527-39698584)
chr5 (405-462)||(42893346-42893403)
chr5 (405-462)||(43001786-43001843)
chr5 (401-453)||(2436904-2436956)
chr5 (292-372)||(3951502-3951581)
chr5 (405-461)||(19168838-19168894)
chr5 (430-462)||(21194139-21194171)
chr5 (290-334)||(29281087-29281131)
chr5 (429-461)||(31264448-31264480)
[»] chr7 (46 HSPs)
chr7 (405-462)||(9482920-9482977)
chr7 (405-462)||(32308106-32308163)
chr7 (406-462)||(20549778-20549834)
chr7 (405-462)||(26733290-26733347)
chr7 (418-462)||(5548675-5548719)
chr7 (418-462)||(29787385-29787429)
chr7 (411-462)||(17851423-17851474)
chr7 (419-462)||(21880152-21880195)
chr7 (424-462)||(2424619-2424657)
chr7 (404-462)||(22868027-22868085)
chr7 (388-462)||(42720906-42720980)
chr7 (405-462)||(598194-598251)
chr7 (405-462)||(1401011-1401068)
chr7 (405-462)||(23191882-23191939)
chr7 (405-462)||(26329398-26329455)
chr7 (405-462)||(27945027-27945084)
chr7 (429-462)||(30731047-30731080)
chr7 (405-462)||(30813798-30813855)
chr7 (272-347)||(11721312-11721387)
chr7 (408-462)||(2948672-2948726)
chr7 (427-461)||(7133295-7133329)
chr7 (420-462)||(9938240-9938282)
chr7 (405-455)||(11722121-11722171)
chr7 (424-462)||(14729706-14729744)
chr7 (403-461)||(18750860-18750918)
chr7 (432-462)||(22602726-22602756)
chr7 (405-462)||(3721080-3721136)
chr7 (405-462)||(5235972-5236029)
chr7 (405-462)||(6630928-6630985)
chr7 (425-462)||(9778506-9778543)
chr7 (405-462)||(11061092-11061149)
chr7 (429-462)||(12289124-12289157)
chr7 (429-462)||(16341506-16341539)
chr7 (429-462)||(19992011-19992044)
chr7 (404-461)||(23930204-23930261)
chr7 (429-462)||(24339652-24339685)
chr7 (429-462)||(25481912-25481945)
chr7 (429-462)||(26033477-26033510)
chr7 (430-462)||(17307904-17307936)
chr7 (418-462)||(18035880-18035924)
chr7 (430-462)||(18233614-18233646)
chr7 (418-454)||(19206049-19206085)
chr7 (418-462)||(27093429-27093473)
chr7 (418-462)||(27184828-27184872)
chr7 (418-462)||(28155569-28155613)
chr7 (417-457)||(32287484-32287524)
[»] chr3 (40 HSPs)
chr3 (401-462)||(1438786-1438847)
chr3 (419-462)||(11251978-11252021)
chr3 (388-462)||(21479087-21479161)
chr3 (408-462)||(28917990-28918044)
chr3 (405-462)||(8383243-8383300)
chr3 (401-462)||(8789566-8789627)
chr3 (405-462)||(11493377-11493434)
chr3 (405-458)||(11658801-11658854)
chr3 (401-462)||(15544675-15544736)
chr3 (406-462)||(4987307-4987363)
chr3 (418-462)||(7928449-7928493)
chr3 (419-462)||(10690278-10690321)
chr3 (411-462)||(16192766-16192817)
chr3 (419-462)||(34307796-34307839)
chr3 (408-462)||(4990983-4991037)
chr3 (405-463)||(21720750-21720808)
chr3 (401-462)||(40993351-40993413)
chr3 (424-462)||(49505170-49505208)
chr3 (429-462)||(9624651-9624684)
chr3 (429-462)||(11313816-11313849)
chr3 (429-462)||(12704017-12704050)
chr3 (429-462)||(14840307-14840340)
chr3 (429-462)||(14979191-14979224)
chr3 (429-462)||(15812837-15812870)
chr3 (405-458)||(23870579-23870632)
chr3 (429-462)||(25948903-25948936)
chr3 (429-462)||(26508120-26508153)
chr3 (429-462)||(27277854-27277887)
chr3 (405-462)||(29112296-29112353)
chr3 (429-462)||(32804556-32804589)
chr3 (429-462)||(34910327-34910360)
chr3 (401-454)||(40052314-40052367)
chr3 (418-462)||(5407263-5407307)
chr3 (406-462)||(9800027-9800083)
chr3 (429-461)||(10954962-10954994)
chr3 (430-462)||(12704056-12704088)
chr3 (429-461)||(20691329-20691361)
chr3 (429-461)||(21149077-21149109)
chr3 (418-462)||(32429396-32429440)
chr3 (405-461)||(46191362-46191418)
[»] chr1 (53 HSPs)
chr1 (407-461)||(20157367-20157421)
chr1 (388-461)||(17831548-17831621)
chr1 (405-462)||(36878447-36878504)
chr1 (418-462)||(25098571-25098615)
chr1 (407-462)||(19324550-19324605)
chr1 (405-459)||(2896140-2896194)
chr1 (408-462)||(34298425-34298479)
chr1 (405-462)||(398781-398838)
chr1 (426-462)||(25361893-25361929)
chr1 (406-462)||(27471582-27471638)
chr1 (419-462)||(7918227-7918270)
chr1 (388-458)||(10474997-10475067)
chr1 (405-459)||(40285673-40285727)
chr1 (424-462)||(44482235-44482273)
chr1 (429-462)||(1864896-1864929)
chr1 (405-462)||(6415017-6415074)
chr1 (405-462)||(6427336-6427393)
chr1 (405-458)||(9629920-9629973)
chr1 (405-462)||(11605951-11606008)
chr1 (429-462)||(12443476-12443509)
chr1 (405-462)||(16927201-16927258)
chr1 (429-462)||(31015053-31015086)
chr1 (405-462)||(31672911-31672968)
chr1 (405-462)||(36905983-36906040)
chr1 (405-462)||(38503306-38503363)
chr1 (429-462)||(40181881-40181914)
chr1 (390-462)||(3490406-3490478)
chr1 (406-462)||(10572605-10572661)
chr1 (406-462)||(38078677-38078733)
chr1 (289-340)||(7120066-7120117)
chr1 (429-464)||(9828054-9828089)
chr1 (409-460)||(17754301-17754352)
chr1 (418-461)||(26238129-26238172)
chr1 (388-422)||(8203739-8203773)
chr1 (400-442)||(13854412-13854454)
chr1 (388-462)||(22881632-22881706)
chr1 (429-462)||(113309-113342)
chr1 (429-462)||(1486725-1486758)
chr1 (405-462)||(5376516-5376573)
chr1 (405-462)||(5898282-5898339)
chr1 (429-462)||(10233263-10233296)
chr1 (429-462)||(14332658-14332691)
chr1 (429-462)||(18337339-18337372)
chr1 (429-462)||(24577202-24577235)
chr1 (429-462)||(25452164-25452197)
chr1 (405-462)||(37055872-37055929)
chr1 (429-462)||(40258949-40258982)
chr1 (405-457)||(16812529-16812581)
chr1 (406-462)||(19562637-19562693)
chr1 (434-462)||(34371728-34371756)
chr1 (401-461)||(38075987-38076047)
chr1 (418-462)||(39953162-39953206)
chr1 (418-462)||(41877486-41877530)
[»] chr8 (28 HSPs)
chr8 (405-462)||(34897071-34897128)
chr8 (388-462)||(4786354-4786428)
chr8 (272-359)||(14482099-14482186)
chr8 (401-462)||(8342956-8343015)
chr8 (404-462)||(14134684-14134742)
chr8 (429-462)||(3025561-3025594)
chr8 (413-462)||(4611528-4611577)
chr8 (405-462)||(8343302-8343359)
chr8 (401-462)||(13844612-13844673)
chr8 (405-462)||(20679411-20679468)
chr8 (405-462)||(24362218-24362275)
chr8 (405-462)||(39954295-39954352)
chr8 (429-462)||(40332201-40332234)
chr8 (419-458)||(18067954-18067993)
chr8 (424-462)||(37283826-37283864)
chr8 (429-462)||(4948662-4948695)
chr8 (429-462)||(7658473-7658506)
chr8 (429-462)||(11803269-11803302)
chr8 (429-462)||(11927102-11927135)
chr8 (429-462)||(13203651-13203684)
chr8 (429-462)||(14731722-14731755)
chr8 (405-462)||(20873055-20873112)
chr8 (429-462)||(25566851-25566884)
chr8 (429-462)||(31236593-31236626)
chr8 (405-462)||(36934656-36934713)
chr8 (429-461)||(12985402-12985434)
chr8 (272-332)||(41620377-41620437)
chr8 (405-457)||(41838144-41838196)
[»] chr4 (35 HSPs)
chr4 (405-462)||(22440616-22440673)
chr4 (405-462)||(903908-903965)
chr4 (418-462)||(8423734-8423778)
chr4 (417-464)||(38148739-38148786)
chr4 (405-462)||(13783267-13783324)
chr4 (425-462)||(18576053-18576090)
chr4 (405-462)||(36635310-36635367)
chr4 (406-462)||(19230325-19230381)
chr4 (414-462)||(28964264-28964312)
chr4 (418-462)||(40613449-40613493)
chr4 (427-462)||(2234258-2234293)
chr4 (431-462)||(16189721-16189752)
chr4 (386-461)||(31243565-31243640)
chr4 (416-462)||(999364-999410)
chr4 (405-454)||(34200295-34200342)
chr4 (405-462)||(35723400-35723458)
chr4 (429-462)||(5775374-5775407)
chr4 (429-462)||(9996850-9996883)
chr4 (429-462)||(11596368-11596401)
chr4 (401-462)||(15029747-15029808)
chr4 (429-462)||(17425405-17425438)
chr4 (429-462)||(24343517-24343550)
chr4 (405-462)||(26504315-26504372)
chr4 (429-462)||(29205454-29205487)
chr4 (429-462)||(32910561-32910594)
chr4 (429-462)||(54580039-54580072)
chr4 (429-462)||(56257943-56257976)
chr4 (418-462)||(1747211-1747255)
chr4 (430-462)||(3064929-3064961)
chr4 (406-454)||(8820395-8820443)
chr4 (405-457)||(11651155-11651207)
chr4 (429-461)||(20743295-20743327)
chr4 (432-460)||(30522933-30522961)
chr4 (429-461)||(46180953-46180985)
chr4 (410-462)||(47263977-47264029)
[»] chr2 (38 HSPs)
chr2 (405-462)||(23718012-23718069)
chr2 (405-462)||(24105684-24105741)
chr2 (401-461)||(29970566-29970626)
chr2 (405-462)||(21616748-21616805)
chr2 (405-462)||(31808063-31808120)
chr2 (406-462)||(21782834-21782890)
chr2 (405-462)||(21091709-21091766)
chr2 (411-464)||(22084846-22084899)
chr2 (405-462)||(30717546-30717603)
chr2 (405-462)||(39323250-39323307)
chr2 (394-462)||(44860297-44860363)
chr2 (418-462)||(18276520-18276564)
chr2 (418-462)||(28677908-28677952)
chr2 (272-360)||(31461334-31461422)
chr2 (418-462)||(36409643-36409687)
chr2 (418-458)||(37411264-37411304)
chr2 (394-461)||(18889608-18889674)
chr2 (273-360)||(33192089-33192176)
chr2 (411-462)||(42832292-42832343)
chr2 (429-459)||(2331804-2331834)
chr2 (273-359)||(28803593-28803679)
chr2 (429-462)||(5367202-5367235)
chr2 (388-461)||(12748653-12748726)
chr2 (289-362)||(15173420-15173493)
chr2 (405-462)||(20539690-20539747)
chr2 (429-462)||(23921263-23921296)
chr2 (401-460)||(24975343-24975399)
chr2 (429-462)||(25846751-25846784)
chr2 (429-462)||(28412360-28412393)
chr2 (405-462)||(30404866-30404923)
chr2 (429-462)||(35449523-35449556)
chr2 (405-462)||(37419729-37419786)
chr2 (401-462)||(38117175-38117236)
chr2 (429-461)||(10535776-10535808)
chr2 (429-461)||(17520087-17520119)
chr2 (426-462)||(27447030-27447066)
chr2 (289-349)||(33197342-33197402)
chr2 (429-461)||(36281695-36281727)
[»] scaffold0590 (1 HSPs)
scaffold0590 (273-360)||(1161-1248)
[»] scaffold0275 (1 HSPs)
scaffold0275 (273-360)||(2727-2814)
[»] chr6 (44 HSPs)
chr6 (408-462)||(19040341-19040395)
chr6 (405-462)||(7265609-7265666)
chr6 (405-462)||(9658865-9658922)
chr6 (405-462)||(13851722-13851779)
chr6 (420-462)||(34073363-34073405)
chr6 (429-462)||(9025510-9025543)
chr6 (405-462)||(9027164-9027221)
chr6 (405-462)||(16766683-16766740)
chr6 (405-462)||(30866160-30866217)
chr6 (429-462)||(31579241-31579274)
chr6 (408-464)||(5000640-5000696)
chr6 (430-462)||(13360388-13360420)
chr6 (390-462)||(6665180-6665256)
chr6 (391-462)||(7377951-7378022)
chr6 (431-462)||(11591886-11591917)
chr6 (407-462)||(17341680-17341735)
chr6 (431-462)||(26562701-26562732)
chr6 (419-462)||(32511682-32511725)
chr6 (388-462)||(5970124-5970198)
chr6 (429-462)||(5462696-5462729)
chr6 (405-462)||(5732526-5732583)
chr6 (429-462)||(7086805-7086838)
chr6 (429-462)||(7569184-7569217)
chr6 (429-462)||(7996394-7996427)
chr6 (429-462)||(8022374-8022407)
chr6 (429-462)||(8805588-8805621)
chr6 (429-462)||(9617444-9617477)
chr6 (429-462)||(9629393-9629426)
chr6 (429-462)||(10770690-10770723)
chr6 (405-458)||(10888994-10889047)
chr6 (405-462)||(12696310-12696367)
chr6 (429-462)||(16388249-16388282)
chr6 (405-462)||(17435185-17435242)
chr6 (405-462)||(17841605-17841662)
chr6 (405-462)||(28152085-28152141)
chr6 (429-462)||(31384930-31384963)
chr6 (429-462)||(34595144-34595177)
chr6 (388-460)||(2140499-2140571)
chr6 (430-458)||(10339146-10339174)
chr6 (405-461)||(10842518-10842574)
chr6 (429-461)||(13364722-13364754)
chr6 (406-454)||(15443682-15443730)
chr6 (272-340)||(22742282-22742350)
chr6 (429-461)||(34446575-34446607)
[»] scaffold0004 (1 HSPs)
scaffold0004 (405-462)||(92793-92850)
[»] scaffold0103 (1 HSPs)
scaffold0103 (405-462)||(51797-51854)
[»] scaffold0044 (1 HSPs)
scaffold0044 (429-462)||(53190-53223)
[»] scaffold0024 (1 HSPs)
scaffold0024 (388-461)||(18125-18198)
[»] scaffold0123 (1 HSPs)
scaffold0123 (390-462)||(44541-44613)
[»] scaffold1528 (1 HSPs)
scaffold1528 (409-460)||(1025-1076)
[»] scaffold0020 (1 HSPs)
scaffold0020 (412-462)||(135328-135378)
[»] scaffold0361 (1 HSPs)
scaffold0361 (429-462)||(14540-14573)
[»] scaffold0306 (1 HSPs)
scaffold0306 (405-462)||(13386-13443)
[»] scaffold0223 (1 HSPs)
scaffold0223 (429-462)||(20182-20215)
[»] scaffold0152 (1 HSPs)
scaffold0152 (405-462)||(21884-21941)
[»] scaffold0085 (1 HSPs)
scaffold0085 (405-454)||(26379-26428)
[»] scaffold0036 (1 HSPs)
scaffold0036 (429-462)||(9763-9796)
[»] scaffold0027 (1 HSPs)
scaffold0027 (429-462)||(46692-46725)
[»] scaffold0022 (1 HSPs)
scaffold0022 (429-462)||(90853-90886)
[»] scaffold0018 (1 HSPs)
scaffold0018 (405-462)||(192265-192322)
[»] scaffold0008 (1 HSPs)
scaffold0008 (429-462)||(263388-263421)


Alignment Details
Target: chr5 (Bit Score: 482; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 28 - 533
Target Start/End: Original strand, 19437952 - 19438457
Alignment:
Q  28 caaagacctcaaatatcttcagtttttctgttaccaaaaagagtttcatgttcaactagttatggattgttgaagtctagaacacttcaacatgagtcta 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19437952 caaagacctcaaatatcttcagtttttctgttaccaaaaagagtttcaagttcaactagttatggattgttgaagtctagaacacttcaacatgagtcta 19438051  T
Q  128 taaattcaagcttggtgttctctccattggtgaagaaggcctttggagtaaatcaaagaaggtttcctgttgttgcagccttagcagcagatgctgatga 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  19438052 taaattcaagcttggtgttctctccattggtgaagaaggcctttggagtaaatcaaagaaggtttccagttgttacagccttagcagcagatgctgatga 19438151  T
Q  228 tagtgaaattgaaatctctaatgggttagagttccacacttcatatttgactttttcttagcttttgttatacaaatattttatatataagcacttgtac 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19438152 tagtgaaattgaaatctctaatgggttagagttccacacttcatatttgactttttcttagcttttgttatagaaatattttatatataagcacttgtac 19438251  T
Q  328 gataagcgtttatcctataagtacttaattaagatatgtatccaactataaagcacgaatacacagacaccaaacacgacactgacacatcgacatcgct 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  19438252 gataagcgtttatcctataagtacttaattaagatatgtatccaactataaagcacgaatacacggataccaaacacgacactgacacatcgacatcgct 19438351  T
Q  428 gataatttgagaaaatcacataattcagtgtaattttgattttaaaccttgtgtttaactttttctgatatttccctttcttaattcttttgcttattga 527  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19438352 gataatttgagaaaatcacataattcagtgtaattttgattttaaaccttgtgtttaactttttctgatatttccctttcttaattcttttgcttattga 19438451  T
Q  528 tgtcca 533  Q
    ||||||    
T  19438452 tgtcca 19438457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 10022625 - 10022675
Alignment:
Q  412 acacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  10022625 acacatcgacatcgttgataatttgataaaatcatataattcagtgtaatt 10022675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 6326370 - 6326313
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||||||||  |||||||||||||| ||||||||||||||||||    
T  6326370 gacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaatt 6326313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 12927640 - 12927697
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||| |||||||||| ||||||||||||||||| |||||| |||||||||    
T  12927640 gacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaatt 12927697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 452
Target Start/End: Complemental strand, 7175092 - 7175045
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataatt 452  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||    
T  7175092 gacactgacacatcgacaccgttaataatttgagaaaatcacataatt 7175045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 3966489 - 3966546
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||   ||||| |||| ||||||||||||||||||| ||||||||||||||    
T  3966489 gacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaatt 3966546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 6471938 - 6471905
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  6471938 ataatttgagaaaatcacataattcagtgtaatt 6471905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 12264914 - 12264845
Alignment:
Q  393 gacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||   | ||| |||| || |||||||||||| |||| |||||||||||||    
T  12264914 gacaccaaacacgacactgacatgccaacaccgctaattatttgagaaaattacatgattcagtgtaatt 12264845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 462
Target Start/End: Complemental strand, 18421894 - 18421857
Alignment:
Q  425 gctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  18421894 gctgataatttgagaaaatcacataatccagtgtaatt 18421857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 27144449 - 27144506
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| |||| |||||||||| ||||||||||||| |||||||||    
T  27144449 gacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaatt 27144506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 28588723 - 28588690
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  28588723 ataatttgagaaaatcacataattcagtgtaatt 28588690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 31084305 - 31084366
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||  |||||  ||| ||||||||| |||||||||||||||| |||||||    
T  31084305 acacgacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaatt 31084366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 462
Target Start/End: Complemental strand, 24273078 - 24273046
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaatt 24273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 462
Target Start/End: Original strand, 24389136 - 24389168
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaatt 24389168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 27932234 - 27932278
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  27932234 cgacaccgctaataatttgagaaaattacataattcagtgtaatt 27932278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 461
Target Start/End: Complemental strand, 21194253 - 21194222
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||||||||||||||||||||    
T  21194253 taatttgagaaaatcacataattcagtgtaat 21194222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 23016048 - 23016005
Alignment:
Q  419 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||| | || |||||||||||||||||||||||||||||||    
T  23016048 gacatcgttaatcatttgagaaaatcacataattcagtgtaatt 23016005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 35095869 - 35095932
Alignment:
Q  272 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcg 335  Q
    |||||||||| | ||| ||||||||||| ||||| |||| |||||||||||| || ||||||||    
T  35095869 atttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataagcg 35095932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 37063161 - 37063248
Alignment:
Q  273 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 360  Q
    ||||||||| | ||| ||||||||||| ||||| |||||| ||||||| || || || |||| ||||| ||||||||| || ||||||    
T  37063161 tttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataagtagttgattaag 37063248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 17593776 - 17593738
Alignment:
Q  424 cgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  17593776 cgctaataatttgagaaaatcacgtaattcagtgtaatt 17593738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 30502442 - 30502404
Alignment:
Q  424 cgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  30502442 cgctaataatttgagaaaatcacttaattcagtgtaatt 30502404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 30542785 - 30542747
Alignment:
Q  424 cgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  30542785 cgctaataatttgagaaaatcacttaattcagtgtaatt 30542747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 462
Target Start/End: Complemental strand, 41091303 - 41091273
Alignment:
Q  432 atttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||||||    
T  41091303 atttgagaaaatcacataattcagtgtaatt 41091273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 5468051 - 5467994
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| || | | || | ||||||||| ||||||||||||||||||||||||    
T  5468051 gacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaatt 5467994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 6247632 - 6247665
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  6247632 ataatttgaaaaaatcacataattcagtgtaatt 6247665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 11685921 - 11685982
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||   ||||| |||| ||||||||||||| || ||||||| |||||||||    
T  11685921 acacgacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaatt 11685982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 14674255 - 14674312
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||  ||| ||||||||| |||||||||||||| |||||||||    
T  14674255 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatt 14674312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 21191105 - 21191072
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  21191105 ataatttgaaaaaatcacataattcagtgtaatt 21191072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 21576794 - 21576761
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  21576794 ataatttgaaaaaatcacataattcagtgtaatt 21576761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 30098312 - 30098369
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||| | || | |||||||||||||||||||||||||| |||||||    
T  30098312 gacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaatt 30098369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 35017047 - 35017080
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  35017047 ataatttgagaaaatcacataatttagtgtaatt 35017080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 39698527 - 39698584
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||   ||||  ||| ||||||||| ||||||||||||||||||||||||    
T  39698527 gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatt 39698584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 42893346 - 42893403
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||| |||||  ||| ||||||||| ||||||||||||| ||||||||||    
T  42893346 gacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaatt 42893403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 43001786 - 43001843
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||  ||||||  ||| ||||||||| ||||| ||||||||||||||||||    
T  43001786 gacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaatt 43001843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 2436904 - 2436956
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattc 453  Q
    |||||||||||||||  ||||| |||| ||||||||  |||||||||||||||    
T  2436904 acacgacactgacacgccgacaccgctaataatttgcaaaaatcacataattc 2436956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 3951581 - 3951502
Alignment:
Q  292 ttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaagatatgtatccaa 372  Q
    ||||| || |||||||||||| |||||||||| || ||||||| ||||| ||||||   |||||||||| ||| |||||||    
T  3951581 ttgttgtataaatattttatacataagcacttatatgataagcatttatgctataa-cgcttaattaagttatttatccaa 3951502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 19168894 - 19168838
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||||||||| | ||| ||||  |||||||| |||||||||| ||||||||||||    
T  19168894 gacactgacacacctacaccgctattaatttgataaaatcacattattcagtgtaat 19168838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 462
Target Start/End: Complemental strand, 21194171 - 21194139
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||| |||||||||||||    
T  21194171 taatttgagaaaatcacatcattcagtgtaatt 21194139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 29281131 - 29281087
Alignment:
Q  290 ttttgttatacaaatattttatatataagcacttgtacgataagc 334  Q
    |||||||||| ||||| |||||||||||| |||| ||||||||||    
T  29281131 ttttgttataaaaatagtttatatataagtacttatacgataagc 29281087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 31264448 - 31264480
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||| |||||||||||||||||    
T  31264448 ataatttgagaaaatgacataattcagtgtaat 31264480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 9482920 - 9482977
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  9482920 gacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaatt 9482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 32308106 - 32308163
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 462
Target Start/End: Original strand, 20549778 - 20549834
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaatt 20549834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 26733290 - 26733347
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| |||||| |||| ||||||||| |||||||||||||||||| |||||    
T  26733290 gacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatt 26733347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 5548675 - 5548719
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  5548675 cgacaccgctgataatttgagaaaatcaaataattcagtgtaatt 5548719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 29787429 - 29787385
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||    
T  29787429 cgacaccgctaataatttgagaaaatcacataattcagtgtaatt 29787385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 17851423 - 17851474
Alignment:
Q  411 gacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||| | |||| ||||||| ||||||||||||||||||||||||||    
T  17851423 gacacatcgataccgctaataattttagaaaatcacataattcagtgtaatt 17851474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 462
Target Start/End: Original strand, 21880152 - 21880195
Alignment:
Q  419 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  21880152 gacatcgctaataatttgagaaaattacataattcagtgtaatt 21880195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 462
Target Start/End: Original strand, 2424619 - 2424657
Alignment:
Q  424 cgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagtgtaatt 2424657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 22868027 - 22868085
Alignment:
Q  404 cgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||  ||||| | || ||||| ||||||||||||||||||||||||||||    
T  22868027 cgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaatt 22868085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 42720980 - 42720906
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| || ||| ||||||||||| | |||| |||| ||||||||| |||||||||||||| | |||||||    
T  42720980 acacagacatcagacatgacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaatt 42720906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 598194 - 598251
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||| |||| ||||||| |||||||||| ||||| | |||||||    
T  598194 gacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaatt 598251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 1401011 - 1401068
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||   || |||||| ||||||||||||| ||||||||||||||||||||    
T  1401011 gacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaatt 1401068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 23191882 - 23191939
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| ||  ||||| |||| ||||||||||||||||||||| ||||||||||||    
T  23191882 gacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaatt 23191939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 26329455 - 26329398
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||||| | |||||||||||||| |||| ||||||||||||||    
T  26329455 gacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaatt 26329398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 27945027 - 27945084
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| | || ||||||||||||||| ||||||||||||||||||    
T  27945027 gacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaatt 27945084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 30731047 - 30731080
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  30731047 ataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 30813798 - 30813855
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| ||  |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  30813798 gacactgatactccgacattgctaataatttgagaaaattacataattcagtgtaatt 30813855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 11721312 - 11721387
Alignment:
Q  272 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataa 347  Q
    |||||||||| | ||| ||||||||||| ||||| |||||| | || ||||| || ||||||||||||| ||||||    
T  11721312 atttgactttcttttaacttttgttatagaaatagtttataaagaaacacttatatgataagcgtttattctataa 11721387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 462
Target Start/End: Original strand, 2948672 - 2948726
Alignment:
Q  408 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||  ||||| |||||||||||| |||||||||| ||||| |||||||||    
T  2948672 actgacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaatt 2948726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 461
Target Start/End: Complemental strand, 7133329 - 7133295
Alignment:
Q  427 tgataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||||| |||||||||||||||||    
T  7133329 tgataatttgagaaaatgacataattcagtgtaat 7133295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 462
Target Start/End: Original strand, 9938240 - 9938282
Alignment:
Q  420 acatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||| |||||| ||||||| |||||||||    
T  9938240 acatcgctgataatttgacaaaatcgcataattaagtgtaatt 9938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 455
Target Start/End: Complemental strand, 11722171 - 11722121
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcag 455  Q
    |||||||||||  ||||| |||| | |||||||||||||||||||||||||    
T  11722171 gacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 462
Target Start/End: Original strand, 14729706 - 14729744
Alignment:
Q  424 cgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  14729706 cgctaataatttgagaaaatcacgtaattcagtgtaatt 14729744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 18750860 - 18750918
Alignment:
Q  403 acgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||||||||||||||||| || | ||||||| ||||||| |||||||| | ||||||    
T  18750860 acgacactgacacatcgacaacggtaataatttaagaaaatgacataattgaatgtaat 18750918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 462
Target Start/End: Complemental strand, 22602756 - 22602726
Alignment:
Q  432 atttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaatt 22602726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 3721080 - 3721136
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||  ||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  3721080 gacactgacatttcgacat-gctaataatttgagaaaatcacataatttagtataatt 3721136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 5235972 - 5236029
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| |||||| |||| ||||||| ||||||| | |||||| |||||||||    
T  5235972 gacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaatt 5236029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 6630985 - 6630928
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| | || ||||||||||||| |||| |||||||||||||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaatt 6630928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 462
Target Start/End: Original strand, 9778506 - 9778543
Alignment:
Q  425 gctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  9778506 gctgataatttgaaaaaatcacataattcagtataatt 9778543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 11061149 - 11061092
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| |||||  ||| ||||||||| |||||||||||||| ||| |||||    
T  11061149 gacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataatt 11061092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 12289124 - 12289157
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||| ||||    
T  12289124 ataatttgagaaaatcacataattcagtggaatt 12289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 16341506 - 16341539
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  16341506 ataatttgagaaaatcacataattaagtgtaatt 16341539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 19992011 - 19992044
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||| ||||||||||||    
T  19992011 ataatttgagaaaatcacatatttcagtgtaatt 19992044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 23930204 - 23930261
Alignment:
Q  404 cgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||| |||||||||||||  | |  |||||||||||||| |||||||||||||||||    
T  23930204 cgacattgacacatcgacacggatagtaatttgagaaaatgacataattcagtgtaat 23930261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 24339652 - 24339685
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  24339652 ataatttgaaaaaatcacataattcagtgtaatt 24339685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 25481912 - 25481945
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  25481912 ataatttgaaaaaatcacataattcagtgtaatt 25481945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 26033510 - 26033477
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  26033510 ataatttgaaaaaatcacataattcagtgtaatt 26033477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 462
Target Start/End: Original strand, 17307904 - 17307936
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||| ||||||||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaatt 17307936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 18035924 - 18035880
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||||||||| || |||||||||||||||| ||||||    
T  18035924 cgacaccgctgataattttaggaaatcacataattcagcgtaatt 18035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 462
Target Start/End: Complemental strand, 18233646 - 18233614
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||| ||||||||||||||||||    
T  18233646 taatttgagaaaatgacataattcagtgtaatt 18233614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 454
Target Start/End: Original strand, 19206049 - 19206085
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattca 454  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  19206049 cgacaccgctaataatttgagaaaatcacataattca 19206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 27093473 - 27093429
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||| |||||||||||||||| |||||||||    
T  27093473 cgacaccgctaataatttaagaaaatcacataatttagtgtaatt 27093429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 27184828 - 27184872
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||| |||||||||||||||| |||||||||    
T  27184828 cgacaccgctaataatttaagaaaatcacataatttagtgtaatt 27184872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 28155569 - 28155613
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||||||||||| ||||||||| ||||||||    
T  28155569 cgacaccgctaataatttgagaaaattacataattcggtgtaatt 28155613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 457
Target Start/End: Complemental strand, 32287524 - 32287484
Alignment:
Q  417 tcgacatcgctgataatttgagaaaatcacataattcagtg 457  Q
    |||||| |||| ||||| |||||||||||||||||||||||    
T  32287524 tcgacaccgctaataatctgagaaaatcacataattcagtg 32287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 1438786 - 1438847
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||    
T  1438786 acacgacactgacacaccgacatcgctaacaatttgagaaaatcacataattcagtataatt 1438847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 462
Target Start/End: Original strand, 11251978 - 11252021
Alignment:
Q  419 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  11251978 gacattgctaataatttgagaaaatcacataattcagtgtaatt 11252021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 21479087 - 21479161
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||||  |||||||||||||||  |||||  ||| ||||||||| ||||||||| ||||||||||||||    
T  21479087 acacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatt 21479161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 462
Target Start/End: Original strand, 28917990 - 28918044
Alignment:
Q  408 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||  |||||| ||| ||||||||| ||||||||||||||||||||||||    
T  28917990 actgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaatt 28918044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 8383243 - 8383300
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||||  ||||| |||| ||||||||||||||||| ||||||||||||||||    
T  8383243 gacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaatt 8383300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 8789627 - 8789566
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||| |||||| |||||  ||| ||||||||||||||||||||||||| ||||||||    
T  8789627 acacaacacagacacaccgacacggcttataatttgagaaaatcacataattccgtgtaatt 8789566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 11493434 - 11493377
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||||| |||||| | || ||||| ||||||||||||||||||||||||||||    
T  11493434 gacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaatt 11493377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 11658801 - 11658854
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 458  Q
    |||||||||||| | |||||| | |||||||||||||||| |||||||||||||    
T  11658801 gacactgacacaccaacatcgttaataatttgagaaaatcgcataattcagtgt 11658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 15544675 - 15544736
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||| | |||| |||| ||||||||| ||||||||||||||| || |||||    
T  15544675 acacgacactgacacgttgacaccgctaataatttgataaaatcacataattctgtataatt 15544736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 4987363 - 4987307
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||  |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 4987307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 7928449 - 7928493
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  7928449 cgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 7928493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 10690321 - 10690278
Alignment:
Q  419 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaatt 10690278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 16192817 - 16192766
Alignment:
Q  411 gacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| ||||| || | ||||||||||||||| ||||||||||||||||||    
T  16192817 gacacaccgacaccgttaataatttgagaaaataacataattcagtgtaatt 16192766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 34307839 - 34307796
Alignment:
Q  419 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaatt 34307796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 462
Target Start/End: Complemental strand, 4991037 - 4990983
Alignment:
Q  408 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||  ||||| |||| ||| ||||||||||| ||||||||||||||||||    
T  4991037 actgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaatt 4990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 21720750 - 21720808
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaattt 463  Q
    |||||||||||  ||||| || | |||||||||||| ||| ||||||||||||||||||    
T  21720750 gacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaattt 21720808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 40993413 - 40993351
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaa-tcacataattcagtgtaatt 462  Q
    ||||||||| ||||| |||||| |||| ||||||| | |||| ||||||||||||||||||||    
T  40993413 acacgacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaatt 40993351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 49505208 - 49505170
Alignment:
Q  424 cgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  49505208 cgctaataatttgagaaaatcacataatttagtgtaatt 49505170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 9624651 - 9624684
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||| |||||||    
T  9624651 ataatttgagaaaatcacataattcaatgtaatt 9624684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 11313849 - 11313816
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  11313849 ataatttgagaaaatcacataatttagtgtaatt 11313816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 12704017 - 12704050
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||| |||||||||||||||||||    
T  12704017 ataatttgagaaaagcacataattcagtgtaatt 12704050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 14840340 - 14840307
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||| ||||||||||||||||||||||||||    
T  14840340 ataatttcagaaaatcacataattcagtgtaatt 14840307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 14979191 - 14979224
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  14979191 ataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 15812870 - 15812837
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||| |||||||||||    
T  15812870 ataatttgagaaaatcacataactcagtgtaatt 15812837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 23870632 - 23870579
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 458  Q
    ||||| ||||| |||||| |||| ||||||||| ||||||| ||||||||||||    
T  23870632 gacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgt 23870579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 25948936 - 25948903
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  25948936 ataatttgaaaaaatcacataattcagtgtaatt 25948903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 26508120 - 26508153
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  26508120 ataatttgaaaaaatcacataattcagtgtaatt 26508153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 27277887 - 27277854
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  27277887 ataatttgagaaaatcacataatttagtgtaatt 27277854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 29112353 - 29112296
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| | |||| | || || |||||||||||||| ||||||||||||||||    
T  29112353 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatt 29112296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 32804589 - 32804556
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  32804589 ataatttgagaaaatcacataatttagtgtaatt 32804556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 34910327 - 34910360
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  34910327 ataatttgaaaaaatcacataattcagtgtaatt 34910360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 40052314 - 40052367
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattca 454  Q
    |||||||||||||||  |||||  ||| ||||||||| ||||||||||||||||    
T  40052314 acacgacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 5407307 - 5407263
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| | |||||||||||||||||||||||| |||||||    
T  5407307 cgacaccgctaaaaatttgagaaaatcacataattcattgtaatt 5407263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 462
Target Start/End: Original strand, 9800027 - 9800083
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||  ||||| | || ||||||||||||||| ||||||||| ||||||||    
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaatt 9800083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 10954962 - 10954994
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||| |||||||||||||||||||||||    
T  10954962 ataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 462
Target Start/End: Original strand, 12704056 - 12704088
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||| |||||||    
T  12704056 taatttgagaaaatcacataattcaatgtaatt 12704088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 20691329 - 20691361
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||| |||||||||||||||||    
T  20691329 ataatttgagaaaatgacataattcagtgtaat 20691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 21149077 - 21149109
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||| |||||||||||||||||    
T  21149077 ataatttgagaaaatgacataattcagtgtaat 21149109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 32429440 - 32429396
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||| ||||||||||||||||||||| ||||    
T  32429440 cgacaacgctaataatttaagaaaatcacataattcagtgcaatt 32429396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 46191418 - 46191362
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||| |||||||||||| |  | |||||||||||||||||||||||| | ||||||    
T  46191418 gacacggacacatcgacaccaataataatttgagaaaatcacataattaaatgtaat 46191362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 461
Target Start/End: Complemental strand, 20157421 - 20157367
Alignment:
Q  407 cactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  20157421 cactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaat 20157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 461
Target Start/End: Complemental strand, 17831621 - 17831548
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||||||||  | |||||||||||||  ||||| |||| |||||||||||||||||||| ||||||||||||    
T  17831621 acacagacaccggatacgacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaat 17831548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 36878447 - 36878504
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 36878504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 25098615 - 25098571
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  25098615 cgacaccgctgataatttgagaaaatcacataattcagtgtaatt 25098571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 462
Target Start/End: Original strand, 19324550 - 19324605
Alignment:
Q  407 cactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| || ||||||  ||||||||||||||||||||||||||||||||||||||    
T  19324550 cactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaatt 19324605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 405 - 459
Target Start/End: Complemental strand, 2896194 - 2896140
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgta 459  Q
    |||||||||||  ||||| |||| |||||||||||||||||||||||||||||||    
T  2896194 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 462
Target Start/End: Original strand, 34298425 - 34298479
Alignment:
Q  408 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||| | || ||||||||||||||||||||||||||||||||||    
T  34298425 actgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatt 34298479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 398838 - 398781
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  398838 gacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 462
Target Start/End: Original strand, 25361893 - 25361929
Alignment:
Q  426 ctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  25361893 ctgataatttgagaaaatcacataattcagtgtaatt 25361929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 27471638 - 27471582
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| ||| | |||| |||||||||||||| |||||||||||||||||||    
T  27471638 acactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaatt 27471582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 7918270 - 7918227
Alignment:
Q  419 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  7918270 gacatcactaataatttgagaaaatcacataattcagtgtaatt 7918227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 458
Target Start/End: Complemental strand, 10475067 - 10474997
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 458  Q
    |||| ||||||  |||||||| ||||||  ||||| |||| |||| |||||||||||||||||||||||||    
T  10475067 acacggacaccggacacgacattgacacgccgacaccgctaataacttgagaaaatcacataattcagtgt 10474997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 459
Target Start/End: Complemental strand, 40285727 - 40285673
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgta 459  Q
    |||||||||||| | ||| |||| |||||||||||||||| ||||||||||||||    
T  40285727 gacactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgta 40285673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 462
Target Start/End: Original strand, 44482235 - 44482273
Alignment:
Q  424 cgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  44482235 cgcttataatttgagaaaatcacataattcagtgtaatt 44482273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 1864929 - 1864896
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  1864929 ataatttgagaaaatcacataattcagtgtaatt 1864896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 6415074 - 6415017
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||||||| || |||||||||||||||||||| |||| |||||    
T  6415074 gacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaatt 6415017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 6427336 - 6427393
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  | ||| |||| |||||||||||||||||||||||||| |||||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaatt 6427393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 9629973 - 9629920
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 458  Q
    ||||| |||||||||||| |||| ||||||||| ||||||| ||||||||||||    
T  9629973 gacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgt 9629920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 11606008 - 11605951
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| | |||||||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  11606008 gacacttaaacatcgacatcgctaataatttgaaaaaatcatataattcagtgaaatt 11605951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 12443509 - 12443476
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  12443509 ataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 16927258 - 16927201
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| ||| ||| ||| ||||||||| ||||||| ||||||||||||||||    
T  16927258 gacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaatt 16927201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 31015053 - 31015086
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  31015053 ataatttgagaaaatcacataattcagtgtaatt 31015086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 31672968 - 31672911
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| |||||  ||| ||||||||| |||||||| |||||||||||||||    
T  31672968 gacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaatt 31672911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 36905983 - 36906040
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| | ||| |||| ||||| ||||||||||||||||||||| ||||||    
T  36905983 gacactgacacaccaacaccgctaataatctgagaaaatcacataattcagagtaatt 36906040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 38503306 - 38503363
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| ||||| ||||| |||| ||||||||||||||||| ||| ||||||||||||    
T  38503306 gacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaatt 38503363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 40181881 - 40181914
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  40181881 ataatttgagaaaatcacataattcagtgtaatt 40181914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 3490478 - 3490406
Alignment:
Q  390 acagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||  |||||||||||||||  |||||  ||| ||||||||||||||  |||| |||||||||||||    
T  3490478 acagacaccggacacgacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaatt 3490406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 10572661 - 10572605
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||  ||||| | || ||||||||||||||||||||||||| ||||||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaatt 10572605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 38078733 - 38078677
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||| ||||||  ||| ||||||||| |||||||||||||||| |||||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatt 38078677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 7120117 - 7120066
Alignment:
Q  289 cttttgttatacaaatattttatatataagcacttgtacgataagcgtttat 340  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||| ||||    
T  7120117 cttttgttatataaatagtttatatataagcacttataccataagcgcttat 7120066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 464
Target Start/End: Original strand, 9828054 - 9828089
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatttt 464  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9828054 ataatttgataaaatcacataattcagtgtaatttt 9828089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 460
Target Start/End: Original strand, 17754301 - 17754352
Alignment:
Q  409 ctgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 460  Q
    |||||||| ||||| |||| ||||||||| ||||| ||||||||||||||||    
T  17754301 ctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 17754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 26238172 - 26238129
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||    
T  26238172 cgacaccgctaataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 8203739 - 8203773
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgaca 422  Q
    ||||| |||||||||||||||||||||||||||||    
T  8203739 acacatacaccaaacacgacactgacacatcgaca 8203773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 442
Target Start/End: Complemental strand, 13854454 - 13854412
Alignment:
Q  400 aacacgacactgacacatcgacatcgctgataatttgagaaaa 442  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||    
T  13854454 aacatgacactgacacatcgacatcggtgataattttagaaaa 13854412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 22881706 - 22881632
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||||  |||||||||||||||  |||||   || ||||||||| |||||||||||||| |||||||||    
T  22881706 acacggacaccggacacgacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatt 22881632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 113309 - 113342
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  113309 ataatttgaaaaaatcacataattcagtgtaatt 113342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 1486758 - 1486725
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  1486758 ataatttgaaaaaatcacataattcagtgtaatt 1486725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 5376573 - 5376516
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| ||||  ||||| |||| ||||||| ||||||| ||||||||||||||||||    
T  5376573 gacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaatt 5376516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 5898339 - 5898282
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| ||  ||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  5898339 gacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaatt 5898282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 10233263 - 10233296
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||||||||||||||||||||||||||||    
T  10233263 ataaattgagaaaatcacataattcagtgtaatt 10233296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 14332691 - 14332658
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  14332691 ataatttgagaaaatcacataatttagtgtaatt 14332658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 18337339 - 18337372
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  18337339 ataatttgaaaaaatcacataattcagtgtaatt 18337372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 24577235 - 24577202
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  24577235 ataatttgaaaaaatcacataattcagtgtaatt 24577202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 25452197 - 25452164
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||| |||||||||||||||||    
T  25452197 ataatttgagaaaatctcataattcagtgtaatt 25452164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 37055929 - 37055872
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| ||||||| |  ||| ||||||||||||||| |||||||| |||||||||    
T  37055929 gacactgatacatcgatactgctaataatttgagaaaattacataatttagtgtaatt 37055872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 40258982 - 40258949
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  40258982 ataatttgaaaaaatcacataattcagtgtaatt 40258949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 457
Target Start/End: Original strand, 16812529 - 16812581
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtg 457  Q
    |||||||||||| ||||| |  | ||||||||| |||||||||||||||||||    
T  16812529 gacactgacacaccgacaccaataataatttgacaaaatcacataattcagtg 16812581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 19562693 - 19562637
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||  |||||  ||| |||||||||||||||| |||| ||||||||||||    
T  19562693 acactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaatt 19562637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 34371728 - 34371756
Alignment:
Q  434 ttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaatt 34371756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 461
Target Start/End: Complemental strand, 38076047 - 38075987
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||| |||||  |||||  ||| |||||||||| ||||||||||| ||||||||||    
T  38076047 acacgacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaat 38075987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 39953206 - 39953162
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||| |||||||||||||||| |||||||||    
T  39953206 cgacaccgctaataattttagaaaatcacataatttagtgtaatt 39953162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 41877530 - 41877486
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||||||||||| |||||||| |||||||||    
T  41877530 cgacaccgctaataatttgagaaaattacataatttagtgtaatt 41877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 34897071 - 34897128
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaatt 34897128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 4786428 - 4786354
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||||| ||||||||||||||||  ||||| |  | ||||||| ||||||||||||||||||||||||||    
T  4786428 acactgacaccgaacacgacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaatt 4786354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 14482186 - 14482099
Alignment:
Q  272 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaa 359  Q
    |||||||||| | ||| ||||||||||| ||||| |||||| |||||||||| || |||||||  | || ||||||| ||||||||||    
T  14482186 atttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataagaacttaattaa 14482099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 8342956 - 8343015
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||  |||||| ||| ||||||||| |||||||||||||| |||||||||    
T  8342956 acacgacactgacac--cgacatagctaataatttgaaaaaatcacataatttagtgtaatt 8343015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 14134684 - 14134742
Alignment:
Q  404 cgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| ||||| ||||||   || ||||||||||||||||||||||||||||||||||    
T  14134684 cgacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaatt 14134742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 3025561 - 3025594
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  3025561 ataatttgagaaaatcacataattcagtgtaatt 3025594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 4611528 - 4611577
Alignment:
Q  413 cacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  4611528 cacaccgacaccgctaataatttgagaaaataacataattcagtgtaatt 4611577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 8343302 - 8343359
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||| |||||| ||| ||||||||| |||||||||||||| |||||||||    
T  8343302 gacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaatt 8343359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 13844673 - 13844612
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| |||||  |||||  ||| |||||||||||||||||||||||| |||||||||    
T  13844673 acacgacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaatt 13844612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 20679468 - 20679411
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||  |||||| | || ||||||||||||||||||||| ||||||||||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaatt 20679411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 24362275 - 24362218
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||  ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  24362275 gacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaatt 24362218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 39954352 - 39954295
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||| |||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaatt 39954295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 40332201 - 40332234
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  40332201 ataatttgagaaaatcacataattcagtgtaatt 40332234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Complemental strand, 18067993 - 18067954
Alignment:
Q  419 gacatcgctgataatttgagaaaatcacataattcagtgt 458  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  18067993 gacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 37283864 - 37283826
Alignment:
Q  424 cgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  37283864 cgctaataatctgagaaaatcacataattcagtgtaatt 37283826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 4948662 - 4948695
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  4948662 ataatttgaaaaaatcacataattcagtgtaatt 4948695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 7658473 - 7658506
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||| ||||||||||||||||||    
T  7658473 ataatttgagaaaattacataattcagtgtaatt 7658506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 11803269 - 11803302
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||| ||||||||||||||||||||||||||    
T  11803269 ataatttaagaaaatcacataattcagtgtaatt 11803302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 11927135 - 11927102
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  11927135 ataatttgataaaatcacataattcagtgtaatt 11927102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 13203651 - 13203684
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||| ||||||||||||||||||    
T  13203651 ataatttgagaaaattacataattcagtgtaatt 13203684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 14731722 - 14731755
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  14731722 ataatttgagaaaatcacataatttagtgtaatt 14731755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 20873055 - 20873112
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||| | | ||||||||| |||||||||||||| |||||||||    
T  20873055 gacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaatt 20873112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 25566851 - 25566884
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  25566851 ataatttgaaaaaatcacataattcagtgtaatt 25566884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 31236626 - 31236593
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||| |||||||    
T  31236626 ataatttgagaaaatcacataattcaatgtaatt 31236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 36934656 - 36934713
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| |||| |||||| |||| |||||| || |||||||||||||||| |||||||    
T  36934656 gacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatt 36934713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 12985402 - 12985434
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||||||||||||||||||||||| ||||||    
T  12985402 ataatttgagaaaatcacataattcaatgtaat 12985434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 41620377 - 41620437
Alignment:
Q  272 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataa 332  Q
    |||||||||| | ||| ||||||||| | |||||  ||||||||||||||||||| |||||    
T  41620377 atttgactttattttatcttttgttacaaaaataacttatatataagcacttgtatgataa 41620437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 457
Target Start/End: Complemental strand, 41838196 - 41838144
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtg 457  Q
    ||||||||||| ||||||  ||| ||||||| | |||||||||||||||||||    
T  41838196 gacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 22440673 - 22440616
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| ||||||||| || | ||||||||||||||||||||||||||||||||||    
T  22440673 gacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaatt 22440616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 903908 - 903965
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| || || || | ||||||||||||||||||||||||||||||||||    
T  903908 gacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaatt 903965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 8423778 - 8423734
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||    
T  8423778 cgacaccgctaataatttgagaaaatcacataattcagtgtaatt 8423734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 38148786 - 38148739
Alignment:
Q  417 tcgacatcgctgataatttgagaaaatcacataattcagtgtaatttt 464  Q
    |||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  38148786 tcgacaccgctaatagtttgagaaaatcacataattcagtgtaatttt 38148739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 13783267 - 13783324
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| ||||| |||| || ||||||||| |||||| ||||||||||||||    
T  13783267 gacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaatt 13783324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 462
Target Start/End: Complemental strand, 18576090 - 18576053
Alignment:
Q  425 gctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  18576090 gctgataatttgagaaaatcacataattcggtgtaatt 18576053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 36635310 - 36635367
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  | ||| | || ||||||||||||||||||||||||||||||||||    
T  36635310 gacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatt 36635367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 19230381 - 19230325
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| ||||| | | ||||||||||||||| |||||||||| |||||||    
T  19230381 acactgacacatggacatagataataatttgagaaaataacataattcaatgtaatt 19230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 28964312 - 28964264
Alignment:
Q  414 acatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||| ||| ||||||||| ||||||||||||||||||||||||    
T  28964312 acattgacatagctaataatttgaaaaaatcacataattcagtgtaatt 28964264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 40613449 - 40613493
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||    
T  40613449 cgacaccgctaatattttgagaaaatcacataattcagtgtaatt 40613493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 462
Target Start/End: Original strand, 2234258 - 2234293
Alignment:
Q  427 tgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||| |||||||    
T  2234258 tgataatttgagaaaatcacataattcaatgtaatt 2234293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 462
Target Start/End: Original strand, 16189721 - 16189752
Alignment:
Q  431 aatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||    
T  16189721 aatttgagaaaatcacataattcagtgtaatt 16189752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 461
Target Start/End: Complemental strand, 31243640 - 31243565
Alignment:
Q  386 atacacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||| ||||| | ||||||||| | ||||||||||    | ||||||||||||||| |||||||||||||||||    
T  31243640 atacacggacacaagacacgacacaggcacatcgacacttataataatttgagaaaatgacataattcagtgtaat 31243565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 462
Target Start/End: Complemental strand, 999410 - 999364
Alignment:
Q  416 atcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| |||||||||| |||||| |||||| |||||||||    
T  999410 atcgacatcgctaataatttgagtaaatcatataatttagtgtaatt 999364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 454
Target Start/End: Complemental strand, 34200342 - 34200295
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattca 454  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  34200342 gacacttacacatcgac--cgctaataatttgagaaaatcacataattca 34200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 35723458 - 35723400
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaat-cacataattcagtgtaatt 462  Q
    |||||||||||  ||||| |||| ||||||||||||||| ||||||||||| |||||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaatt 35723400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 5775407 - 5775374
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  5775407 ataatttgagaaaatcacataattaagtgtaatt 5775374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 9996850 - 9996883
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||| |||||    
T  9996850 ataatttgagaaaatcacataattcagtataatt 9996883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 11596401 - 11596368
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  11596401 ataatttgaaaaaatcacataattcagtgtaatt 11596368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 15029747 - 15029808
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||   ||||  ||| ||||||||| || |||||||||||||||||||||    
T  15029747 acacgacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaatt 15029808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 17425438 - 17425405
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||| |||||||||||||||||    
T  17425438 ataatttgagaaaatcgcataattcagtgtaatt 17425405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 24343517 - 24343550
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||| ||||||||||||||||||    
T  24343517 ataatttgagaaaattacataattcagtgtaatt 24343550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 26504372 - 26504315
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| |||||||||  ||| ||||||| ||||||||| ||| ||||||||||||    
T  26504372 gacactgaaacatcgacactgctaataatttaagaaaatcaaatagttcagtgtaatt 26504315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 29205454 - 29205487
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  29205454 ataatttgaaaaaatcacataattcagtgtaatt 29205487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 32910561 - 32910594
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||| ||||||||||||||||||    
T  32910561 ataatttgagaaaatgacataattcagtgtaatt 32910594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 54580072 - 54580039
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  54580072 ataatttgaaaaaatcacataattcagtgtaatt 54580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 56257943 - 56257976
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||| ||||||||||||||||    
T  56257943 ataatttgagaaaatcatataattcagtgtaatt 56257976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 1747211 - 1747255
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| |||| ||||||||||||||||||||||| |||||    
T  1747211 cgacaccgctaataaattgagaaaatcacataattcagtttaatt 1747255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 462
Target Start/End: Complemental strand, 3064961 - 3064929
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||| ||||||||||||||    
T  3064961 taatttgagaaaatcacacaattcagtgtaatt 3064929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 8820395 - 8820443
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattca 454  Q
    |||||||||| || |||||| | ||||||||| ||||||||||||||||    
T  8820395 acactgacacgtcaacatcgataataatttgataaaatcacataattca 8820443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 457
Target Start/End: Complemental strand, 11651207 - 11651155
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtg 457  Q
    ||||||||||| ||||||  ||| ||||||| | |||||||||||||||||||    
T  11651207 gacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 20743327 - 20743295
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||| |||||||||||||||||    
T  20743327 ataatttgagaaaatgacataattcagtgtaat 20743295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 432 - 460
Target Start/End: Complemental strand, 30522961 - 30522933
Alignment:
Q  432 atttgagaaaatcacataattcagtgtaa 460  Q
    |||||||||||||||||||||||||||||    
T  30522961 atttgagaaaatcacataattcagtgtaa 30522933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 46180985 - 46180953
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||| |||||||||||||||||    
T  46180985 ataatttgagaaaataacataattcagtgtaat 46180953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 462
Target Start/End: Original strand, 47263977 - 47264029
Alignment:
Q  410 tgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| ||||||| ||| ||||||||  ||||||||||||||| ||||||||    
T  47263977 tgacacgtcgacatagctaataatttgtaaaaatcacataattctgtgtaatt 47264029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 23718012 - 23718069
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||    
T  23718012 gacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaatt 23718069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 24105684 - 24105741
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||    
T  24105684 gacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaatt 24105741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 401 - 461
Target Start/End: Complemental strand, 29970626 - 29970566
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||||| |||| |||| |||||||||||||||| |||| |||||||||||    
T  29970626 acacgacactgacacattgacaccgctaataatttgagaaaatcgcatagttcagtgtaat 29970566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 21616748 - 21616805
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  21616748 gacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 21616805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 31808063 - 31808120
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| ||||| |||| ||||||| | ||||||||||||||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaatt 31808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 21782890 - 21782834
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||  |||||  ||| ||||||||||||||||||||||||||||||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaatt 21782834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 21091709 - 21091766
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||| ||||| |||| ||||||| ||||||| ||||| ||||||||||||    
T  21091709 gacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaatt 21091766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 464
Target Start/End: Complemental strand, 22084899 - 22084846
Alignment:
Q  411 gacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatttt 464  Q
    |||||||| ||| || | ||||||||||||||||| ||||||||||||||||||    
T  22084899 gacacatcaacaccgttaataatttgagaaaatcatataattcagtgtaatttt 22084846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 30717603 - 30717546
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||| | |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  30717603 gacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaatt 30717546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 39323250 - 39323307
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| || |||||| |||| ||||||||| ||||| ||||||||||||||||||    
T  39323250 gacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaatt 39323307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 44860297 - 44860363
Alignment:
Q  394 acaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| ||||||||| |||||   |||| |||| |||||||||||||||| |||||||||||||||||    
T  44860297 acaccagacacgacacggacact--gacaccgctaataatttgagaaaatcgcataattcagtgtaatt 44860363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 18276520 - 18276564
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||    
T  18276520 cgacaccgctaataatttgagaaaatcacttaattcagtgtaatt 18276564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 28677908 - 28677952
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  28677908 cgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 28677952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 31461422 - 31461334
Alignment:
Q  272 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 360  Q
    |||||||||| | ||| ||||||||||| |||||  |||||||||| ||||| || ||||  ||||||| ||| |||| ||||||||||    
T  31461422 atttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgatatacgtttatgctagaagtgcttaattaag 31461334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 36409687 - 36409643
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||    
T  36409687 cgacaccgctgataatttgaaaaaatcacataatttagtgtaatt 36409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 458
Target Start/End: Complemental strand, 37411304 - 37411264
Alignment:
Q  418 cgacatcgctgataatttgagaaaatcacataattcagtgt 458  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  37411304 cgacaccgctaataatttgagaaaatcacataattcagtgt 37411264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 461
Target Start/End: Complemental strand, 18889674 - 18889608
Alignment:
Q  394 acaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||| ||||||||| |||||  ||||  |||| |||| ||||||||||||||||||||||||||||    
T  18889674 acaccagacacgacacggacacg-cgacgccgctaataaattgagaaaatcacataattcagtgtaat 18889608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 33192176 - 33192089
Alignment:
Q  273 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 360  Q
    ||||||||| | ||| ||| ||||||| ||||| ||| |||||||||||||||  |||||| |||||| || ||||  ||||||||||    
T  33192176 tttgactttattttatcttatgttatagaaatagtttttatataagcacttgtgtgataagagtttatgctttaagcgcttaattaag 33192089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 42832343 - 42832292
Alignment:
Q  411 gacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||| ||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaattacatatttcagtgtaatt 42832292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 459
Target Start/End: Original strand, 2331804 - 2331834
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgta 459  Q
    |||||||||||||||||||||||||||||||    
T  2331804 ataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 28803593 - 28803679
Alignment:
Q  273 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaa 359  Q
    ||||||||| | ||| ||||||||||  |||||  |||||||||||||||| || ||||||| ||||| | ||||  ||||||||||    
T  28803593 tttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttatgccataaacacttaattaa 28803679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 5367202 - 5367235
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||| |||||||||||||||||||||||    
T  5367202 ataatttgaggaaatcacataattcagtgtaatt 5367235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 461
Target Start/End: Original strand, 12748653 - 12748726
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||||||||  ||||||||| |||||   ||||| | | ||||||||||||||| ||||| |||||||||||    
T  12748653 acacagacaccggacacgacacggacacgctgacatggataataatttgagaaaatgacatagttcagtgtaat 12748726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 15173493 - 15173420
Alignment:
Q  289 cttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaagat 362  Q
    ||||||||||| |||||  ||||| |||  |||||||||||||||||||||| |||| |   ||||||||||||    
T  15173493 cttttgttatagaaataacttatacatagacacttgtacgataagcgtttatgctatcaacgcttaattaagat 15173420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 20539747 - 20539690
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| ||||||  ||| ||||||||| ||||||| |||||| |||||||||    
T  20539747 gacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaatt 20539690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 23921263 - 23921296
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||| ||||||||||||||||||    
T  23921263 ataatttgagaaaattacataattcagtgtaatt 23921296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 24975399 - 24975343
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 460  Q
    |||||||||||||||   |||| |||| ||||||||||||||||  ||||||||||||||    
T  24975399 acacgacactgacac---gacaccgctaataatttgagaaaatcgtataattcagtgtaa 24975343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 25846751 - 25846784
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||| |||||||||||||    
T  25846751 ataatttgagaaaatcacatgattcagtgtaatt 25846784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 28412360 - 28412393
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  28412360 ataatttgataaaatcacataattcagtgtaatt 28412393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 30404923 - 30404866
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||  | | ||||||||| ||||||||||||||||||||||||    
T  30404923 gacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaatt 30404866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 35449523 - 35449556
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||| ||||||||||||||    
T  35449523 ataatttgagaaaatcacagaattcagtgtaatt 35449556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 37419729 - 37419786
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||| ||  ||||||||| ||||||||| ||||||||||||||    
T  37419729 gacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaatt 37419786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 38117236 - 38117175
Alignment:
Q  401 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||  |||||  ||| ||||||||| ||||||||||| ||| ||||||||    
T  38117236 acacgacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaatt 38117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 10535808 - 10535776
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||| |||||||||||||||||    
T  10535808 ataatttgagaaaatgacataattcagtgtaat 10535776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 17520119 - 17520087
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||| |||||||||||||||||||||||||    
T  17520119 ataatttaagaaaatcacataattcagtgtaat 17520087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 462
Target Start/End: Complemental strand, 27447066 - 27447030
Alignment:
Q  426 ctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  27447066 ctgataatttgagaagatcccataattcagtgtaatt 27447030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 33197342 - 33197402
Alignment:
Q  289 cttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagt 349  Q
    ||||||||||| |||||  ||||| |||||||||| || |||||||||||||  |||||||    
T  33197342 cttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagt 33197402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 36281695 - 36281727
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    |||||||||||||||||||||||| ||||||||    
T  36281695 ataatttgagaaaatcacataatttagtgtaat 36281727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 1161 - 1248
Alignment:
Q  273 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 360  Q
    ||||||||| | ||| ||||||||||| |||||  ||||| |||||||||| || ||||  ||||||| |||||||||||||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaag 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 2814 - 2727
Alignment:
Q  273 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 360  Q
    ||||||||| | ||| ||||||||||| |||||  ||||| |||||||||| || ||||  ||||||| |||||||||||||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaag 2727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 462
Target Start/End: Original strand, 19040341 - 19040395
Alignment:
Q  408 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 19040395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 7265666 - 7265609
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  | ||| |||| ||||||||||||||||||||||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaatt 7265609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 9658865 - 9658922
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| |||| ||||||| ||||||||||||||||||||||||||    
T  9658865 gacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaatt 9658922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 13851722 - 13851779
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||| |||||| |||| ||||||||||||||| || |||||||||||||||    
T  13851722 gacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaatt 13851779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 462
Target Start/End: Complemental strand, 34073405 - 34073363
Alignment:
Q  420 acatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  34073405 acatcgctaataatttgagaaaatctcataattcagtgtaatt 34073363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 9025543 - 9025510
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  9025543 ataatttgagaaaatcacataattcagtgtaatt 9025510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 9027164 - 9027221
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| |||| ||||||||||| ||||||||||||| ||||||||    
T  9027164 gacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaatt 9027221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 16766683 - 16766740
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  16766683 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 16766740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 30866217 - 30866160
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||| | ||| |||| |||||||||||||||||||||||||| |||||||    
T  30866217 gacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaatt 30866160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 31579274 - 31579241
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  31579274 ataatttgagaaaatcacataattcagtgtaatt 31579241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 5000696 - 5000640
Alignment:
Q  408 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatttt 464  Q
    |||||||| |||||| |||| |||||| ||||||||||||| ||||||| |||||||    
T  5000696 actgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataatttt 5000640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 462
Target Start/End: Complemental strand, 13360420 - 13360388
Alignment:
Q  430 taatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaatt 13360388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 6665180 - 6665256
Alignment:
Q  390 acagacaccaaacacgacactgacacat----cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| |||||||||| |||||||    ||| | |||| |||||||||| |||||||||||||||| ||||||    
T  6665180 acagacaccgaacacgacacggacacatacgccgaaaccgctaataatttgagtaaatcacataattcagagtaatt 6665256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 7377951 - 7378022
Alignment:
Q  391 cagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||  |||| |||| |||||  ||||| |||| | |||||||||||||||||||||||| |||||||    
T  7377951 cagacaccggacacaacacagacaccccgacaccgctaaaaatttgagaaaatcacataattcaatgtaatt 7378022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 462
Target Start/End: Complemental strand, 11591917 - 11591886
Alignment:
Q  431 aatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaatt 11591886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 462
Target Start/End: Complemental strand, 17341735 - 17341680
Alignment:
Q  407 cactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||  ||||| || | ||||||||| ||||||||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaatt 17341680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 462
Target Start/End: Original strand, 26562701 - 26562732
Alignment:
Q  431 aatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaatt 26562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 32511725 - 32511682
Alignment:
Q  419 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagtgtaatt 32511682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 5970198 - 5970124
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||| ||||||  ||| ||||| ||||| ||||||  | | ||||||||| ||||||||||||||||||||||||    
T  5970198 acacggacaccggacatgacacggacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaatt 5970124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 5462696 - 5462729
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||| |||||||    
T  5462696 ataatttgagaaaatcacataattcattgtaatt 5462729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 5732583 - 5732526
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| || | ||||||||||||||||||||| || |||||||||    
T  5732583 gacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaatt 5732526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 7086805 - 7086838
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  7086805 ataatttgagaaaatcacataatttagtgtaatt 7086838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 7569217 - 7569184
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||| ||||||||||||||||||    
T  7569217 ataatttgagaaaattacataattcagtgtaatt 7569184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 7996427 - 7996394
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||| ||||||||||||||||    
T  7996427 ataatttgagaaaatcatataattcagtgtaatt 7996394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 8022374 - 8022407
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||| ||||||||||||||||    
T  8022374 ataatttgagaaaatcatataattcagtgtaatt 8022407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 8805621 - 8805588
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||| |||||||||    
T  8805621 ataatttgagaaaatcacataatttagtgtaatt 8805588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 9617444 - 9617477
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||| |||||||    
T  9617444 ataatttgagaaaatcacataattcaatgtaatt 9617477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 9629393 - 9629426
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||||||||||| |||||||    
T  9629393 ataatttgagaaaatcacataattcaatgtaatt 9629426  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 10770723 - 10770690
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  10770723 ataatttgaaaaaatcacataattcagtgtaatt 10770690  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 10889047 - 10888994
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 458  Q
    ||||| ||||||| |||| |||| ||||||||| |||||||||||||| |||||    
T  10889047 gacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgt 10888994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 12696310 - 12696367
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||  ||| ||||||||| ||||| ||||||||||||||||||    
T  12696310 gacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatt 12696367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 16388282 - 16388249
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  16388282 ataatttgaaaaaatcacataattcagtgtaatt 16388249  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 17435185 - 17435242
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||| || ||||||| ||| ||||||| | ||||| ||||||||||||||||||    
T  17435185 gacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaatt 17435242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 17841662 - 17841605
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||  ||| ||||||||| |||||||||||||| |||||||||    
T  17841662 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatt 17841605  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 28152085 - 28152141
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  28152085 gacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaatt 28152141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 31384930 - 31384963
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  31384930 ataatttgaaaaaatcacataattcagtgtaatt 31384963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 34595144 - 34595177
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  34595144 ataatttgaaaaaatcacataattcagtgtaatt 34595177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 460
Target Start/End: Complemental strand, 2140571 - 2140499
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 460  Q
    |||| ||||||||| || ||||  | |||||||||| | | ||||||||||||||| |||||||||| |||||    
T  2140571 acacggacaccaaatacaacacaaatacatcgacattgataataatttgagaaaatgacataattcaatgtaa 2140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 458
Target Start/End: Complemental strand, 10339174 - 10339146
Alignment:
Q  430 taatttgagaaaatcacataattcagtgt 458  Q
    |||||||||||||||||||||||||||||    
T  10339174 taatttgagaaaatcacataattcagtgt 10339146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 10842518 - 10842574
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||| |||||  ||||| |||| ||||||||| |||||||||||||| ||||||||    
T  10842518 gacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 13364754 - 13364722
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||||| |||||||||||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaat 13364722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 15443682 - 15443730
Alignment:
Q  406 acactgacacatcgacatcgctgataatttgagaaaatcacataattca 454  Q
    |||||||||| ||||||||  | ||||||||||||||| ||||||||||    
T  15443682 acactgacacgtcgacatcaataataatttgagaaaataacataattca 15443730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 22742350 - 22742282
Alignment:
Q  272 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttat 340  Q
    |||||||||| | ||| | |||||||||||||||  ||||| ||||| |||| ||||||||||| ||||    
T  22742350 atttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttat 22742282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 34446575 - 34446607
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaat 461  Q
    ||||||||||||||| |||||||||||||||||    
T  34446575 ataatttgagaaaatgacataattcagtgtaat 34446607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 92793 - 92850
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  92793 gacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaatt 92850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 51797 - 51854
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  51797 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 51854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 53190 - 53223
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||||||||||||||||||||    
T  53190 ataatttgagaaaatcacataattcagtgtaatt 53223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 461
Target Start/End: Complemental strand, 18198 - 18125
Alignment:
Q  388 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 461  Q
    |||| ||||||| ||||||||||||||| |||||| || | | | ||||||||||| |||||||||| ||||||    
T  18198 acacggacaccagacacgacactgacacgtcgacaccgataaaattttgagaaaataacataattcaatgtaat 18125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 44613 - 44541
Alignment:
Q  390 acagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||| ||||||||  ||||    |||| |||| | ||||||||||||||||||||||||||||||||    
T  44613 acagacaccagacacgacagggacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaatt 44541  T

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Target: scaffold1528 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 460
Target Start/End: Original strand, 1025 - 1076
Alignment:
Q  409 ctgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 460  Q
    |||||||| ||||| |||| ||||||||| ||||| ||||||||||||||||    
T  1025 ctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 135378 - 135328
Alignment:
Q  412 acacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||| |||||  ||| ||||||||||||||||||||||||| ||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgtaatt 135328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 14540 - 14573
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  14540 ataatttgaaaaaatcacataattcagtgtaatt 14573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 13386 - 13443
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||   || ||||||||||||||||||||||||||||| ||||    
T  13386 gacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatt 13443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 20182 - 20215
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  20182 ataatttgaaaaaatcacataattcagtgtaatt 20215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 21941 - 21884
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  |||||   || ||||||||||||||||||||||||||||| ||||    
T  21941 gacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatt 21884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 454
Target Start/End: Original strand, 26379 - 26428
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattca 454  Q
    |||| |||||| |||||| | || ||||||||||||||||||||||||||    
T  26379 gacagtgacacgtcgacaccactaataatttgagaaaatcacataattca 26428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 9796 - 9763
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||||||| |||||||||||||||    
T  9796 ataatttgagaaaatcacttaattcagtgtaatt 9763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 46692 - 46725
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  46692 ataatttgaaaaaatcacataattcagtgtaatt 46725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 90853 - 90886
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    ||||||||||||||||| ||||||||||||||||    
T  90853 ataatttgagaaaatcatataattcagtgtaatt 90886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 192322 - 192265
Alignment:
Q  405 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||  ||||| || | ||||||||||||||| ||||||||| ||||||||    
T  192322 gacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaatt 192265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 263421 - 263388
Alignment:
Q  429 ataatttgagaaaatcacataattcagtgtaatt 462  Q
    |||||||||||||| |||||||||||||||||||    
T  263421 ataatttgagaaaaccacataattcagtgtaatt 263388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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