View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9595A_low_100 (Length: 309)

Name: NF9595A_low_100
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9595A_low_100
NF9595A_low_100
[»] chr1 (10 HSPs)
chr1 (105-223)||(31771310-31771428)
chr1 (101-223)||(7608318-7608440)
chr1 (76-169)||(7608224-7608317)
chr1 (76-169)||(31771212-31771305)
chr1 (23-81)||(7608097-7608155)
chr1 (25-81)||(31771087-31771143)
chr1 (166-223)||(1721556-1721613)
chr1 (166-233)||(17726023-17726089)
chr1 (179-224)||(32440659-32440704)
chr1 (166-224)||(22368196-22368254)
[»] scaffold0152 (1 HSPs)
scaffold0152 (127-223)||(10195-10291)
[»] chr3 (10 HSPs)
chr3 (149-228)||(19766009-19766088)
chr3 (236-291)||(11427105-11427160)
chr3 (179-234)||(11394007-11394062)
chr3 (127-212)||(31687881-31687966)
chr3 (38-78)||(31688056-31688096)
chr3 (179-223)||(46233973-46234017)
chr3 (38-78)||(31896771-31896811)
chr3 (38-78)||(31912480-31912520)
chr3 (166-229)||(52130783-52130846)
chr3 (38-78)||(31946128-31946168)
[»] chr2 (5 HSPs)
chr2 (166-237)||(997806-997877)
chr2 (149-224)||(4453777-4453852)
chr2 (179-224)||(9208569-9208614)
chr2 (189-228)||(7161811-7161850)
chr2 (170-233)||(3625169-3625234)
[»] chr4 (5 HSPs)
chr4 (166-233)||(32651267-32651334)
chr4 (149-233)||(38467690-38467775)
chr4 (149-221)||(3649873-3649945)
chr4 (168-231)||(41810163-41810226)
chr4 (188-223)||(26720237-26720272)
[»] scaffold0003 (3 HSPs)
scaffold0003 (127-223)||(36966-37062)
scaffold0003 (188-228)||(43199-43239)
scaffold0003 (39-78)||(36837-36876)
[»] chr6 (3 HSPs)
chr6 (189-234)||(31444760-31444805)
chr6 (188-228)||(27444122-27444162)
chr6 (181-229)||(33054175-33054223)
[»] scaffold0014 (1 HSPs)
scaffold0014 (188-230)||(32608-32650)
[»] chr8 (2 HSPs)
chr8 (149-223)||(44663663-44663737)
chr8 (149-223)||(35348991-35349066)
[»] chr7 (2 HSPs)
chr7 (179-228)||(16262692-16262741)
chr7 (181-223)||(21820186-21820228)


Alignment Details
Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 31771310 - 31771428
Alignment:
Q  105 gaggaaaaaatggcaaacagattagatccaagggctgaggtttgttggcacctaaaataggagaattagggttgggagtgttatttggagtgttaactag 204  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31771310 gaggaaaaaattgcaaacagattagatccaagggctgaggtttgttggcgcctaaaacaggagaattagggttgggagtgttatttggagtgttaactag 31771409  T
Q  205 gattaggaataagttagat 223  Q
    |||||||||||||||||||    
T  31771410 gattaggaataagttagat 31771428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 7608318 - 7608440
Alignment:
Q  101 aaaggaggaaaaaatggcaaacagattagatccaagggctgaggtttgttggcacctaaaataggagaattagggttgggagtgttatttggagtgttaa 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  7608318 aaaggaggaaaaaattgcaaacagattagatccaagggctgagatttgttggcgcctaaaacaggagaattagggttgggagtgttatttggagttttaa 7608417  T
Q  201 ctaggattaggaataagttagat 223  Q
    |||||||||||||||||||||||    
T  7608418 ctaggattaggaataagttagat 7608440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 7608224 - 7608317
Alignment:
Q  76 aatacaattaattttgtcacgtaagaaaggaggaaaaaatggcaaacagattagatccaagggctgaggtttgttggcacctaaaataggagaa 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  7608224 aatacaattaattttgtcacgtaagaaaggaggaaaaaatggcaaacagattagatccaagggctgaggtttgttggcgcctaaaacaggagaa 7608317  T

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Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 31771212 - 31771305
Alignment:
Q  76 aatacaattaattttgtcacgtaagaaaggaggaaaaaatggcaaacagattagatccaagggctgaggtttgttggcacctaaaataggagaa 169  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  31771212 aatacaattaattttgtcacgtaagaaaggaggaaaaactggcaaacagattagatccaagggctgaggtttgttggcgcctaaaacaggagaa 31771305  T

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Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 7608097 - 7608155
Alignment:
Q  23 ggagagaaaggagggttattggaaaccaataacattaattatttgtcatttacaataca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7608097 ggagagaaaggagggttattggaaaccaataacattaattatttgtcatttacaataca 7608155  T

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Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 31771087 - 31771143
Alignment:
Q  25 agagaaaggagggttattggaaaccaataacattaattatttgtcatttacaataca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31771087 agagaaaggagggttattggaaaccaataacattaattatttgtcatttacaataca 31771143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 1721613 - 1721556
Alignment:
Q  166 agaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagat 223  Q
    |||||||||||||| || |||| |||||||||||| ||||||||||||||||||||||    
T  1721613 agaattagggttggcagcgttaattggagtgttaattaggattaggaataagttagat 1721556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 17726089 - 17726023
Alignment:
Q  166 agaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagattagattagat 233  Q
    ||||||||||||   |||| || |||||||||||||||||||||||||||| ||||||||||||||||    
T  17726089 agaattagggttttaagtgataattggagtgttaactaggattaggaataa-ttagattagattagat 17726023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 32440659 - 32440704
Alignment:
Q  179 ggagtgttatttggagtgttaactaggattaggaataagttagatt 224  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  32440659 ggagtgataattggagtgttaactaggattaggaataagttagatt 32440704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 22368196 - 22368254
Alignment:
Q  166 agaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagatt 224  Q
    ||||||||||||   |||| || ||| ||||||||||||||||||||||||||||||||    
T  22368196 agaattagggttttaagtgataattgaagtgttaactaggattaggaataagttagatt 22368254  T

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Target: scaffold0152 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 10291 - 10195
Alignment:
Q  127 tagatccaagggctgaggtttgtt-ggcacctaaaataggagaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagat 223  Q
    |||||||||||||| ||| ||||| ||| ||||||| || |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  10291 tagatccaagggct-aggattgtttggcgcctaaaaaagtagaattagggtttggagtgttaattggagtgttaactaggattgggaataagttagat 10195  T

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Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 19766088 - 19766009
Alignment:
Q  149 ttggcacctaaaataggagaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagattagat 228  Q
    ||||| ||||||| || || ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  19766088 ttggcgcctaaaaaagtaggattagggtttggagtgttaattggagtgttaactaggattagaaataagttagattagat 19766009  T

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Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 11427105 - 11427160
Alignment:
Q  236 attacctgattgcaaaatgtaattagttttgcatcttgatactatgaaaatgatgt 291  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  11427105 attacctgattgcaaaatataattagttttgcatcttgataccatgaaaatgatgt 11427160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 11394062 - 11394007
Alignment:
Q  179 ggagtgttatttggagtgttaactaggattaggaataagttagattagattagata 234  Q
    |||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  11394062 ggagtgataattggagtgttaactaggattagaaataagttagattagattagata 11394007  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 31687966 - 31687881
Alignment:
Q  127 tagatccaagggctgaggtttgtt-ggcacctaaaataggagaattagggttgggagtgttatttggagtgttaactaggattagga 212  Q
    |||||||||||||| ||| ||||| ||| ||||||| || |||||||||||| ||||||| | |||||||||||||||||| |||||    
T  31687966 tagatccaagggct-aggattgtttggcgcctaaaaaagtagaattagggtttggagtgtaagttggagtgttaactaggactagga 31687881  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 31688096 - 31688056
Alignment:
Q  38 ttattggaaaccaataacattaattatttgtcatttacaat 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  31688096 ttattggaaaccgataacattaattatttgtcatttacaat 31688056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 46233973 - 46234017
Alignment:
Q  179 ggagtgttatttggagtgttaactaggattaggaataagttagat 223  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  46233973 ggagtgataattggagtgttaactaggattaggaataagttagat 46234017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 31896771 - 31896811
Alignment:
Q  38 ttattggaaaccaataacattaattatttgtcatttacaat 78  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  31896771 ttattggaaatcgataacattaattatttgtcatttacaat 31896811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 31912480 - 31912520
Alignment:
Q  38 ttattggaaaccaataacattaattatttgtcatttacaat 78  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  31912480 ttattggaaatcgataacattaattatttgtcatttacaat 31912520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 52130846 - 52130783
Alignment:
Q  166 agaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagattagatt 229  Q
    ||||||||||||   |||| || ||||||||||| |||||||||| ||||||||||| ||||||    
T  52130846 agaattagggttttaagtggtaattggagtgttacctaggattagaaataagttagactagatt 52130783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 31946128 - 31946168
Alignment:
Q  38 ttattggaaaccaataacattaattatttgtcatttacaat 78  Q
    |||||||||| | |||||||| |||||||||||||||||||    
T  31946128 ttattggaaatcgataacattcattatttgtcatttacaat 31946168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 997877 - 997806
Alignment:
Q  166 agaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagattagattagatagat 237  Q
    |||||||||||||| || | || ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  997877 agaattagggttggcagggctaattgaagtgttaactaggattaggaataagttagattagattagatagat 997806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 4453852 - 4453777
Alignment:
Q  149 ttggcacctaaaataggagaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagatt 224  Q
    ||||| ||||||||   ||||||||||||   |||| || ||||||||||||||||||||||||||||||||||||    
T  4453852 ttggcgcctaaaatcatagaattagggttttaagtggtaattggagtgttaactaggattaggaataagttagatt 4453777  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 9208614 - 9208569
Alignment:
Q  179 ggagtgttatttggagtgttaactaggattaggaataagttagatt 224  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  9208614 ggagtgataattggagtgttaactaggattaggaataagttagatt 9208569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 7161850 - 7161811
Alignment:
Q  189 ttggagtgttaactaggattaggaataagttagattagat 228  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  7161850 ttggagtgttaactaggattagaaataagttagattagat 7161811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 3625234 - 3625169
Alignment:
Q  170 ttagggttgggagtgttatttggagtgttaactaggattaggaataagttaga--ttagattagat 233  Q
    |||||||||| |  |||| |||||||||||| |||||||||||||||||||||  |||||||||||    
T  3625234 ttagggttggcatggttaattggagtgttaattaggattaggaataagttagaagttagattagat 3625169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 32651267 - 32651334
Alignment:
Q  166 agaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagattagattagat 233  Q
    ||||||||||||   |||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  32651267 agaattagggttttaagtgataattggagtgttaactaggattaggaataagttagattagattagat 32651334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 38467690 - 38467775
Alignment:
Q  149 ttggcacctaaaatagg-agaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagattagattagat 233  Q
    ||||| ||||||||| | ||||||||||||   ||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  38467690 ttggcgcctaaaataagtagaattagggttttaagtgttaattggagtgttaactaggattataaataagttagattagattagat 38467775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 3649945 - 3649873
Alignment:
Q  149 ttggcacctaaaataggagaattagggttgggagtgttatttggagtgttaactaggattaggaataagttag 221  Q
    ||||| ||||||| || ||| ||||||||   ||||||| |||||||||||||||||||||||||||||||||    
T  3649945 ttggcgcctaaaaaagtagatttagggttttaagtgttaattggagtgttaactaggattaggaataagttag 3649873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 41810226 - 41810163
Alignment:
Q  168 aattagggttgggagtgttatttggagtgttaactaggattaggaataagttagattagattag 231  Q
    ||||||||||   |||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  41810226 aattagggttttaagtggtaattggagtgttaactaggattagaaataagttagattagattag 41810163  T

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Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 26720272 - 26720237
Alignment:
Q  188 tttggagtgttaactaggattaggaataagttagat 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  26720272 tttggagtgttaactaggattaggaataagttagat 26720237  T

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Target: scaffold0003 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 36966 - 37062
Alignment:
Q  127 tagatccaagggctgaggtttgtt-ggcacctaaaataggagaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagat 223  Q
    |||||||||||||| ||| ||||| ||| ||||||| || ||||||||| || | ||||||| |||||||||||| ||||||||||||||||||||||    
T  36966 tagatccaagggct-aggattgtttggcgcctaaaaaagaagaattaggatttgaagtgttaattggagtgttaattaggattaggaataagttagat 37062  T

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Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 43199 - 43239
Alignment:
Q  188 tttggagtgttaactaggattaggaataagttagattagat 228  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  43199 tttggagtgttaactacgattaggaataagttagattagat 43239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 36837 - 36876
Alignment:
Q  39 tattggaaaccaataacattaattatttgtcatttacaat 78  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  36837 tattggaaaccgataacattaattatttgtcatttacaat 36876  T

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Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 31444805 - 31444760
Alignment:
Q  189 ttggagtgttaactaggattaggaataagttagattagattagata 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31444805 ttggagtgttaactaggattaggaataagttagattagattagata 31444760  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 27444162 - 27444122
Alignment:
Q  188 tttggagtgttaactaggattaggaataagttagattagat 228  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  27444162 tttggagtgttaactacgattaggaataagttagattagat 27444122  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 33054175 - 33054223
Alignment:
Q  181 agtgttatttggagtgttaactaggattaggaataagttagattagatt 229  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  33054175 agtgttaattgtagtgttaattaggattaggaataagttagattagatt 33054223  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 32650 - 32608
Alignment:
Q  188 tttggagtgttaactaggattaggaataagttagattagatta 230  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  32650 tttggagtgttaactaggattagaaataagttagattagatta 32608  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 44663663 - 44663737
Alignment:
Q  149 ttggcacctaaaataggagaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagat 223  Q
    ||||| ||||||||   ||||||||||||   |||| || |||||||||||||||||||||||||||||||||||    
T  44663663 ttggcgcctaaaatcatagaattagggttttaagtggtaattggagtgttaactaggattaggaataagttagat 44663737  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 35349066 - 35348991
Alignment:
Q  149 ttggcacctaaaatagg-agaattagggttgggagtgttatttggagtgttaactaggattaggaataagttagat 223  Q
    ||||| ||||||||| | ||||||||| ||   ||||||| |||||||||||||||||||||| ||||||||||||    
T  35349066 ttggcgcctaaaataagtagaattaggattttaagtgttaattggagtgttaactaggattagaaataagttagat 35348991  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 16262692 - 16262741
Alignment:
Q  179 ggagtgttatttggagtgttaactaggattaggaataagttagattagat 228  Q
    |||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  16262692 ggagtgataattgaagtgttaactaggattaggaataagttagattagat 16262741  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 21820186 - 21820228
Alignment:
Q  181 agtgttatttggagtgttaactaggattaggaataagttagat 223  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  21820186 agtgttaattggagtgttaattaggattaggaataagttagat 21820228  T

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