View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9595A_low_112 (Length: 294)
Name: NF9595A_low_112
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9595A_low_112 |
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Alignment Details
Target: chr4 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 6 - 289
Target Start/End: Complemental strand, 24211105 - 24210822
Alignment:
| Q |
6 |
aaattcaactttggatgagataaagaattggatgaaagagtgggaaccatggatggttatagttaagattttccaacaagttcacactctttgtttcaac |
105 |
Q |
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| T |
24211105 |
aaattcaactttggatgagataaagaattggatgaaagagtgggaaccatggatggttatagttaagattttccaacaagttcacactctttgtttcaac |
24211006 |
T |
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| Q |
106 |
tatagaacatgttttttggtttgtgaaacattaacatagtaatgtttatctttggctttggaccgttaatctagtttggtgtttgtgggaattatcttga |
205 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24211005 |
tatagaacatgttttttggtttgtgaaacataaacatagtaatgtttatctttggctttggaccgttaatctagtttggtgtttgtgggaattatcttga |
24210906 |
T |
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| Q |
206 |
atagaagaggtaagctagatgtagcgaattggatttagccacgtaatcagagtttatccattgaagaaatattgaacaccaaac |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24210905 |
atagaagaggtaagctagatgtagcgaattggatttagccacgtaatcagagtttatccattgaagaaatattgaacaccaaac |
24210822 |
T |
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