View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9595A_low_162 (Length: 257)
Name: NF9595A_low_162
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9595A_low_162 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 40521892 - 40522132
Alignment:
| Q |
1 |
tcaaacaaaattttagttctgtttggtttgagataacgttcgctattttcatttcgtactcttattttttaattgcaaaattacctcttcttttcattat |
100 |
Q |
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| T |
40521892 |
tcaaacaaaattttagttctgtttggtttgagataacgttcgctattttcatttcgtactcttatttt-taattgcaaaattacctcttcttttcattat |
40521990 |
T |
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| Q |
101 |
gtttcctgtgtttcgaatatttgaacatgaataggtaaaaacactttatcaaactagaatgctgaagttaagaactgaggacacaacggcgagtgtgctt |
200 |
Q |
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| T |
40521991 |
gtttcctgtgtttcgaatatttgaacatgaataggtaaaaacactttatcaaactagaatgctgaagttaagaactgaggacacaacggcgagtgtgctt |
40522090 |
T |
|
| Q |
201 |
acctgaaaaaggcacaattgaacgtatcttctccttctagat |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
40522091 |
acctgaaaaaggcacaattgaacgtatcttctccttctagat |
40522132 |
T |
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