View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9595A_low_17 (Length: 451)

Name: NF9595A_low_17
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9595A_low_17
NF9595A_low_17
[»] chr7 (19 HSPs)
chr7 (14-425)||(969035-969452)
chr7 (139-199)||(11344042-11344102)
chr7 (52-199)||(28476362-28476519)
chr7 (20-199)||(35133051-35133240)
chr7 (20-212)||(48930811-48931013)
chr7 (110-197)||(46822543-46822630)
chr7 (42-197)||(38439837-38439998)
chr7 (142-199)||(38880422-38880479)
chr7 (76-152)||(39171435-39171512)
chr7 (14-152)||(8001391-8001539)
chr7 (139-199)||(24069199-24069259)
chr7 (20-152)||(40993261-40993403)
chr7 (76-152)||(28407763-28407840)
chr7 (41-152)||(48061547-48061668)
chr7 (20-75)||(22743048-22743103)
chr7 (116-191)||(25068267-25068342)
chr7 (148-199)||(31481896-31481947)
chr7 (76-152)||(37837303-37837380)
chr7 (76-152)||(47590480-47590557)
[»] chr6 (17 HSPs)
chr6 (20-212)||(8102829-8103031)
chr6 (130-212)||(31851676-31851759)
chr6 (20-192)||(9380126-9380308)
chr6 (36-212)||(30776782-30776968)
chr6 (76-199)||(14801995-14802120)
chr6 (20-75)||(127772-127827)
chr6 (20-192)||(546134-546316)
chr6 (110-192)||(679311-679393)
chr6 (20-164)||(26588305-26588459)
chr6 (76-152)||(21426531-21426608)
chr6 (20-75)||(1523511-1523566)
chr6 (140-199)||(10084950-10085009)
chr6 (5-75)||(1933624-1933694)
chr6 (76-152)||(12170636-12170713)
chr6 (76-152)||(23128786-23128863)
chr6 (76-152)||(29319722-29319799)
chr6 (76-155)||(7976029-7976109)
[»] chr4 (25 HSPs)
chr4 (16-212)||(36194826-36195032)
chr4 (77-199)||(52933747-52933870)
chr4 (20-199)||(43853565-43853754)
chr4 (76-212)||(6155004-6155145)
chr4 (76-199)||(42032327-42032451)
chr4 (76-212)||(18935969-18936106)
chr4 (76-199)||(27652130-27652254)
chr4 (38-199)||(36161851-36162022)
chr4 (42-155)||(9643532-9643643)
chr4 (139-199)||(37465724-37465784)
chr4 (110-197)||(33332390-33332477)
chr4 (114-192)||(7393424-7393502)
chr4 (142-192)||(48350999-48351049)
chr4 (16-73)||(22038736-22038793)
chr4 (20-192)||(31891088-31891274)
chr4 (14-152)||(2520895-2521043)
chr4 (14-152)||(21686087-21686235)
chr4 (110-188)||(22038618-22038696)
chr4 (76-149)||(29960797-29960871)
chr4 (5-75)||(47320344-47320414)
chr4 (41-75)||(51888143-51888177)
chr4 (110-199)||(1621309-1621398)
chr4 (14-75)||(4142684-4142745)
chr4 (108-169)||(52060751-52060812)
chr4 (139-199)||(22806788-22806848)
[»] chr3 (28 HSPs)
chr3 (20-199)||(8914813-8915002)
chr3 (5-212)||(51923813-51924030)
chr3 (76-199)||(7546781-7546906)
chr3 (76-199)||(21289612-21289736)
chr3 (20-199)||(42460850-42461039)
chr3 (36-192)||(16235543-16235709)
chr3 (76-152)||(21533654-21533731)
chr3 (114-199)||(53508427-53508512)
chr3 (35-75)||(51487211-51487251)
chr3 (139-199)||(52115815-52115875)
chr3 (5-155)||(53807700-53807860)
chr3 (110-169)||(24175959-24176018)
chr3 (47-192)||(27856293-27856448)
chr3 (5-75)||(29922143-29922213)
chr3 (5-75)||(29971296-29971366)
chr3 (133-199)||(41818439-41818505)
chr3 (76-152)||(6954541-6954618)
chr3 (139-212)||(27706011-27706084)
chr3 (76-152)||(32701657-32701734)
chr3 (110-192)||(38142726-38142810)
chr3 (5-155)||(35175490-35175650)
chr3 (5-75)||(628855-628925)
chr3 (139-212)||(3085086-3085160)
chr3 (20-152)||(12050493-12050635)
chr3 (114-164)||(32460805-32460855)
chr3 (76-149)||(48650582-48650656)
chr3 (76-152)||(4711648-4711725)
chr3 (76-152)||(40487491-40487568)
[»] chr1 (15 HSPs)
chr1 (20-199)||(48750290-48750479)
chr1 (20-199)||(36775508-36775697)
chr1 (85-188)||(25564177-25564281)
chr1 (110-199)||(31692265-31692354)
chr1 (110-196)||(41994669-41994755)
chr1 (13-164)||(34412925-34413086)
chr1 (14-155)||(19061008-19061159)
chr1 (139-196)||(50616476-50616533)
chr1 (139-196)||(50624303-50624360)
chr1 (140-199)||(40163239-40163298)
chr1 (76-149)||(21947466-21947540)
chr1 (76-152)||(16989541-16989618)
chr1 (170-199)||(30853629-30853658)
chr1 (76-152)||(35484236-35484313)
chr1 (76-155)||(24583316-24583396)
[»] chr8 (20 HSPs)
chr8 (36-190)||(43833801-43833965)
chr8 (47-199)||(8867936-8868101)
chr8 (14-199)||(14585775-14585970)
chr8 (20-199)||(18890495-18890684)
chr8 (18-212)||(41896619-41896822)
chr8 (20-212)||(42046325-42046527)
chr8 (110-199)||(26468946-26469035)
chr8 (139-199)||(18846265-18846325)
chr8 (39-75)||(34609959-34609995)
chr8 (78-164)||(470995-471082)
chr8 (140-199)||(19443860-19443919)
chr8 (5-75)||(15344397-15344467)
chr8 (5-75)||(15433462-15433532)
chr8 (5-75)||(15524766-15524836)
chr8 (5-75)||(39657543-39657613)
chr8 (84-164)||(5046930-5047011)
chr8 (139-192)||(34610069-34610122)
chr8 (5-73)||(1236629-1236697)
chr8 (5-73)||(1239329-1239397)
chr8 (76-191)||(34493171-34493287)
[»] chr5 (11 HSPs)
chr5 (20-212)||(2979091-2979293)
chr5 (20-192)||(19103272-19103454)
chr5 (5-199)||(14211313-14211517)
chr5 (5-199)||(39567356-39567560)
chr5 (20-199)||(28540704-28540893)
chr5 (114-199)||(35920794-35920879)
chr5 (76-152)||(13007395-13007472)
chr5 (5-146)||(8088063-8088214)
chr5 (110-199)||(19121113-19121202)
chr5 (76-152)||(25980323-25980400)
chr5 (76-152)||(38597963-38598040)
[»] chr2 (16 HSPs)
chr2 (5-212)||(10237002-10237219)
chr2 (20-212)||(14955641-14955844)
chr2 (75-199)||(3309121-3309246)
chr2 (77-188)||(28533764-28533876)
chr2 (110-192)||(19595705-19595788)
chr2 (76-199)||(37416887-37417010)
chr2 (142-212)||(14416399-14416470)
chr2 (76-152)||(7677719-7677796)
chr2 (5-155)||(10929762-10929922)
chr2 (76-197)||(19598016-19598138)
chr2 (76-149)||(7646655-7646729)
chr2 (139-192)||(3460527-3460580)
chr2 (76-152)||(4778930-4779007)
chr2 (76-199)||(12553979-12554104)
chr2 (76-152)||(25508914-25508991)
chr2 (47-75)||(37994423-37994451)
[»] scaffold0039 (2 HSPs)
scaffold0039 (140-199)||(93338-93397)
scaffold0039 (15-75)||(93204-93264)
[»] scaffold0884 (1 HSPs)
scaffold0884 (38-152)||(1818-1942)
[»] scaffold0021 (1 HSPs)
scaffold0021 (139-199)||(4377-4437)
[»] scaffold0050 (1 HSPs)
scaffold0050 (76-152)||(65887-65964)
[»] scaffold0888 (2 HSPs)
scaffold0888 (35-75)||(1610-1650)
scaffold0888 (110-199)||(1476-1565)
[»] scaffold0015 (1 HSPs)
scaffold0015 (111-199)||(3843-3931)
[»] scaffold0347 (1 HSPs)
scaffold0347 (20-75)||(6132-6187)
[»] scaffold0121 (1 HSPs)
scaffold0121 (18-75)||(31206-31263)
[»] scaffold0603 (1 HSPs)
scaffold0603 (77-199)||(7883-8007)
[»] scaffold0064 (1 HSPs)
scaffold0064 (133-189)||(18891-18947)


Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 14 - 425
Target Start/End: Complemental strand, 969452 - 969035
Alignment:
Q  14 tggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatattcattttgccgttgtatgttattaacatgagtgtatgag 113  Q
    ||||| ||||| ||||| ||||| || |||||||||||  |||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||    
T  969452 tggacgtcaatattgcagattcataagcatgagtattctagtgatttagattttatcatatttattttaccgttgtatgttattaacatgggtgtatgag 969353  T
Q  114 tttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaa-tttgaataaatgaagatattttgtttt 212  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||| |||   |||||||||||||| |||||||||||||||||||| ||||||    
T  969352 tttgtttgcatatttaccttttatgtttttagtgacgttgatcatgttattgtat---atgtattatatcaaatttgaataaatgaagatattgtgtttt 969256  T
Q  213 gtnnnnnnnnn--tgcaagtggatcatttcatttagtttgagtcaggtacctatatgacatggttcattattcatggttctttccacgcaataagggagc 310  Q
    ||           ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  969255 gtaaaaaaaaaaatgcaagtggatcatttcctttagtttgaatcagctacctatatgacatggttcattattcatgattctttccacgcgataagggagc 969156  T
Q  311 cttaggtaagaaataacaatgttttctttttt-----aaggaaggtaagaaataacaatgtatagttactatatgggagcaaataatacaagcaacat-a 404  Q
    ||||||||||||||||||| ||||| ||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  969155 cttaggtaagaaataacaaggtttttttttttttttgaaggaaggtaagaaataacaatgtatagttactatatgggagcaaataatacaagcaacataa 969056  T
Q  405 atgaatgtgatgggtatttag 425  Q
    |||||||||||||||||||||    
T  969055 atgaatgtgatgggtatttag 969035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 11344042 - 11344102
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  11344042 tttttagcgatgttgatcatgttattgtatctgatgtattatatcaatttgaataaatgaa 11344102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 199
Target Start/End: Original strand, 28476362 - 28476519
Alignment:
Q  52 cggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatattt 141  Q
    ||||||||||||||||||||||||         |||||||||||   ||||||||||| |||||| | |||||||||||||| ||| ||| ||||  |||    
T  28476362 cggtgatttagattttatcatattatttgtaggcattttgccgtgcaatgttattaacttgagtgctgtgagtttgtttgcagattcaccatttacgttt 28476461  T
Q  142 ttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||| || |||||||||||||| | || |||||||| ||||||| ||||| ||||||    
T  28476462 ttagcaatattgatcatgttattatctctgatgtattctatcaatatgaatgaatgaa 28476519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 35133051 - 35133240
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| |||||| || || || |||||||||||  ||||||||||||| ||||||||         ||||||||||||||||| ||||||| || ||| |     
T  35133051 tcaacgttgcagatccaaaagcatgagtattctagtgatttagatttcatcatattatttctaggcattttgccgttgtatgctattaacttgggtgatg 35133150  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| | ||  |||||| |||| |||||||||||||| | || |||||||| ||||||||||||| ||||||    
T  35133151 tgagtttgttcgcagattcaccctatacgtttttaacgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaa 35133240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 48930811 - 48931013
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta- 109  Q
    |||| |||||| || |||||||||  |||||| |||||||||||||| ||||||||         ||||||||||||||||| ||||||| || || |      
T  48930811 tcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatattatttgttggcattttgccgttgtatgctattaacttgggtattg 48930910  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagatattttgt 209  Q
    |||||||||| ||| ||| | | | ||  ||||||||||| |||||||||||||| | || |||||||| ||||||||| ||| |||||| ||  |||||    
T  48930911 tgagtttgttcgcagattcaacctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttaaatgaatgaatatcctttgt 48931010  T
Q  210 ttt 212  Q
    |||    
T  48931011 ttt 48931013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 46822630 - 46822543
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatg 197  Q
    |||||||||| ||||||| || |||||  ||| |||||||||||||||||||||| ||||  ||| ||| ||||||||||||| ||||    
T  46822630 tgagtttgttcgcatattcactttttacgtttgtagcgatgttgatcatgttattgtatctaatgcattctatcaatttgaatgaatg 46822543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 38439837 - 38439998
Alignment:
Q  42 atgagtattccggtgatttagattttatcatattc-----attttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttacctttt 135  Q
    |||||||||| |||||||| |||||||||||| |      |||||||||| ||||||||||||  ||  |||  || ||||||||||| ||| |   |||    
T  38439837 atgagtattctggtgattttgattttatcataatattggtattttgccgtagtatgttattaatctggatgttgtgggtttgtttgcaaattcataattt 38439936  T
Q  136 atatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatg 197  Q
    | |||||||| ||||||||||||| |||| |||| ||| |||||||||||||| ||| ||||    
T  38439937 acatttttagtgatgttgatcatgatattgtatcagatatattatatcaatttaaatgaatg 38439998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 38880479 - 38880422
Alignment:
Q  142 ttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||| |||||||||||||| |||| |||||||| || |||||||||||||||||    
T  38880479 ttagcgatattgatcatgttattatatctgatgtattctaacaatttgaataaatgaa 38880422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 39171512 - 39171435
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||||||| ||| ||| ||||  ||||||||||||||    
T  39171512 cattttgccgttgtatgctattaacttgggtgctatgagtttgtttgcagattcaccctttacgtttttagcgatgtt 39171435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 8001539 - 8001391
Alignment:
Q  14 tggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatga 104  Q
    ||||| |||| |||||| |||| ||| |||||||||| |||||| |||| ||||||||||||         ||||||||||||||||| ||||||| ||     
T  8001539 tggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttaggttttatcatattatttataggcattttgccgttgtatgctattaacttgg 8001440  T
Q  105 gtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||| | |||||||||| ||| ||| ||| ||||  ||||||||||||||    
T  8001439 gtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 8001391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 24069259 - 24069199
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||||||||||||| ||||||||||||| || ||||| |||| |||||||| ||||||    
T  24069259 tttttagcgatgttgattatgttattttatctgaggtattctatcgatttgaatcaatgaa 24069199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 40993261 - 40993403
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| ||||||||||||||| |||| ||||| |||||| |||  ||||||||||||         ||||||| ||||||||||||||||| || ||| |     
T  40993261 tcaacgttgcatattcagaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttg 40993360  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    |||||||||| ||| ||| ||| ||||  ||||||||||||||    
T  40993361 tgagtttgttcgcagattcaccctttacgtttttagcgatgtt 40993403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 28407840 - 28407763
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| ||  || | |||||||||| ||| ||||||| ||||| ||||||||||||||    
T  28407840 cattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagatttaccctttatgtttttagcgatgtt 28407763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 48061547 - 48061668
Alignment:
Q  41 catgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttac 130  Q
    |||||||||| ||||||||||| ||||||||||||         ||||||||||||||||| ||||||| || ||| |||||||||||| ||| ||| ||    
T  48061547 catgagtatttcggtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttatgagtttgttcgcagattcac 48061646  T
Q  131 cttttatatttttagcgatgtt 152  Q
    | ||||  ||||||| ||||||    
T  48061647 cctttacgtttttagagatgtt 48061668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 22743048 - 22743103
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||| |||||| || ||||| ||||||||||| |||||||||||||| ||||||||    
T  22743048 tcaacgttgcagatccagaagcatgagtattctggtgatttagatttcatcatatt 22743103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 25068267 - 25068342
Alignment:
Q  116 tgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaa 191  Q
    |||||||| ||| ||| ||||  ||||||||||| ||||| |||||||| | || |||||||| ||||||||||||    
T  25068267 tgtttgcagattcaccatttacgtttttagcgatattgatgatgttattgtttctgatgtattctatcaatttgaa 25068342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 31481947 - 31481896
Alignment:
Q  148 atgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||| ||||||    
T  31481947 atgttgatcatgttattgtatatgatgtattctatcaatttgaatgaatgaa 31481896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 37837380 - 37837303
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    |||||||||||| |||| ||||||| || ||| | |||||||||| ||||||| ||| ||||  ||||||||||||||    
T  37837380 cattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgatgtt 37837303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 47590480 - 47590557
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||| | ||||||| || ||||  |||||||||||||| ||||||| ||||  |||| |||||||||    
T  47590480 cattttgccgttgtaagctattaacttgggtgttgtgagtttgtttgcagatttaccctttacgttttcagcgatgtt 47590557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 8102829 - 8103031
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| |||||| || ||||||||||| ||||| | |||||||||||||||||||||         ||||||||||| | ||||||||||| || ||| |     
T  8102829 tcaacgttgcagatccagaaacatgaatattctgatgatttagattttatcatattatttgtaggcattttgccgtggaatgttattaacttgggtgctg 8102928  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagatattttgt 209  Q
    |||||||||||||| ||| ||||||||  ||||||||||| |||||||||||||| | || |||||||| ||||||| ||||| |||||| ||  |||||    
T  8102929 tgagtttgtttgcagattcaccttttacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatatgaatgaatgaatatcctttgt 8103028  T
Q  210 ttt 212  Q
    |||    
T  8103029 ttt 8103031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 31851759 - 31851676
Alignment:
Q  130 ccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaaga-tattttgtttt 212  Q
    |||||||| |||||||||||||||||| |||||||  ||| |||||||| ||||||||||||| |||||| | |||||||||||    
T  31851759 ccttttatgtttttagcgatgttgatcttgttattgcatctgatgtattctatcaatttgaatgaatgaatattattttgtttt 31851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 9380126 - 9380308
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta- 109  Q
    ||||||||| | |||||||| |||| |||||  |||||||||||||||||||||||         ||||||| ||||||||  ||||| | ||  |||      
T  9380126 tcaatgttgtagattcagaagcatgggtattttggtgatttagattttatcatattatttgtatgcattttgtcgttgtattctattatcttggatgttg 9380225  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||||||| ||||||| ||| |||| ||||||| | ||||||||||||||||  |||  ||| ||||||||||||||||||    
T  9380226 tgagtttgttcgcatattcaccatttacatttttatcaatgttgatcatgttatagtatttgatatattatatcaatttgaat 9380308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 212
Target Start/End: Original strand, 30776782 - 30776968
Alignment:
Q  36 agaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcata 125  Q
    |||| |||| |||||| |||||||||||||||||||||||         ||||||||||| | ||| ||||||| || ||||  |||||||||| ||| |    
T  30776782 agaagcatgggtattctggtgatttagattttatcatattatttgtaggcattttgccgtggaatgctattaacttgggtgttgtgagtttgttcgcaga 30776881  T
Q  126 tttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagatattttgtttt 212  Q
    || ||| ||||  ||||||||||| |||||||||||||| | || || ||||| ||||||| ||||| |||||| ||  ||||||||    
T  30776882 ttcaccctttacgtttttagcgatattgatcatgttattgtctctgacgtattctatcaatatgaatgaatgaatatcatttgtttt 30776968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 14801995 - 14802120
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttac-cttttatatttttagcgatgttgatcatgttattttatccgat 173  Q
    ||||||||||||||||| ||||||| ||  || | |||||||||| ||| ||| || || |||  ||||||||||| || ||||||||||| | || |||    
T  14801995 cattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcactctattacgtttttagcgatattaatcatgttattgtctctgat 14802094  T
Q  174 gtattatatcaatttgaataaatgaa 199  Q
    ||||| ||||||||||||| ||||||    
T  14802095 gtattctatcaatttgaatgaatgaa 14802120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 127772 - 127827
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||| |||||| |||| ||| |||||||||| ||||||||||||||||||||||||    
T  127772 tcaacgttgcagattcggaagcatgagtatttcggtgatttagattttatcatatt 127827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 546134 - 546316
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| |||||| || ||||| |||| |||||| |||| ||||||||| ||||||||         ||||||||||||||||| ||||||| || ||| |     
T  546134 tcaacgttgcagatccagaagcatgggtattctggtggtttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctg 546233  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||||||| ||| ||| | | | ||  ||||||||||| |||||||||| ||| | || ||| |||| |||||||||||||    
T  546234 tgagtttgttcgcagattcatcctatacgtttttagcgatattgatcatgtcattgtgtctgatatattctatcaatttgaat 546316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 679311 - 679393
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||||||| | | ||| ||| ||||  |||||||| |||||||| |||||||| |||| |||||||| |||||||||||||    
T  679311 tgagtttgttcgtagattcaccctttacgtttttagcaatgttgattatgttattgtatctgatgtattctatcaatttgaat 679393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 26588459 - 26588305
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta- 109  Q
    |||| |||||| || ||||| ||||||||||  |||||||| ||||||||||||||         |||||||| |||||||| | ||||| ||  |||      
T  26588459 tcaacgttgcaaatccagaagcatgagtatttgggtgattttgattttatcatattatttttagacattttgctgttgtatgctcttaacttggatgtcg 26588360  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttatt 164  Q
    ||||||||||||||  || ||| ||||  ||||||||||||||||||||||||||    
T  26588359 tgagtttgtttgcagcttcaccctttaagtttttagcgatgttgatcatgttatt 26588305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 21426608 - 21426531
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||| ||||||| ||| ||||  ||||||||||||||    
T  21426608 cattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccgtttacgtttttagcgatgtt 21426531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 1523511 - 1523566
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||| |||||| || ||||| |||| |||||| |||||||||||||||||||||||    
T  1523511 tcaacgttgcagatccagaagcatgggtattctggtgatttagattttatcatatt 1523566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 10085009 - 10084950
Alignment:
Q  140 ttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||| ||| |||||| |||||||| |||| |||||||| ||||||||||||| ||||||    
T  10085009 ttttaacgacgttgatgatgttattctatctgatgtattctatcaatttgaatgaatgaa 10084950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 1933694 - 1933624
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  ||||| |||| |||||| || | ||||||||| ||||| ||||||||| |||||||||||||    
T  1933694 tcaatgatttggacgtcaacgttgcagatccggaaacatgattattctggtgatttatattttatcatatt 1933624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 12170636 - 12170713
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    |||||||| |||||||| ||||||| || ||| | |||||||| | ||||||| ||| |||| |||||||||||||||    
T  12170636 cattttgctgttgtatgctattaacttgggtgctgtgagtttgctcgcatattcaccctttacatttttagcgatgtt 12170713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 23128786 - 23128863
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||  || ||| | |||||||||| ||| ||| ||| |||| |||||||||||||||    
T  23128786 cattttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcaccctttacatttttagcgatgtt 23128863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 29319799 - 29319722
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgt-atgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    |||||| |||||||||| ||||||| ||  ||| ||||||||||| ||| ||| ||||||||  ||||||||||||||    
T  29319799 cattttaccgttgtatgctattaacttggttgttatgagtttgttcgcagattcaccttttacgtttttagcgatgtt 29319722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 7976109 - 7976029
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgat 155  Q
    ||||||||||||||||| ||||||| |  ||| | |||||||||| ||||||| | | ||||| |||||||| ||||||||    
T  7976109 cattttgccgttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatcctttatgtttttagcaatgttgat 7976029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 8e-25; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 36194826 - 36195032
Alignment:
Q  16 gacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagt 106  Q
    |||||||| |||||| || |||||||||| |||||| |||||||||||||| ||||||||         ||||||||||||||||| ||||||| ||  |    
T  36194826 gacatcaaagttgcagatccagaaacatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggat 36194925  T
Q  107 gta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagatatt 205  Q
    ||  |||||||||| ||| ||| ||||| ||| ||||||| ||| |||||| ||||||| | || |||||||| ||||||||||||| |||||| ||  |    
T  36194926 gttgtgagtttgttcgcagattcaccttatatgtttttagtgatattgatcgtgttattatgtctgatgtattctatcaatttgaatgaatgaatatcct 36195025  T
Q  206 ttgtttt 212  Q
    |||||||    
T  36195026 ttgtttt 36195032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 52933870 - 52933747
Alignment:
Q  77 attttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgt 175  Q
    |||||||  ||||||||||||||| |||||| | |||||||||  ||| ||||||  |||| |||||||||||||||| |||||||||| ||||  ||||    
T  52933870 attttgcttttgtatgttattaacttgagtgatgtgagtttgtgcgcagatttacgctttacatttttagcgatgttggtcatgttattgtatctaatgt 52933771  T
Q  176 attatatcaatttgaataaatgaa 199  Q
    ||| ||||||||||||||||||||    
T  52933770 attttatcaatttgaataaatgaa 52933747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 43853565 - 43853754
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta- 109  Q
    |||| |||||| |||| ||| |||| |||||  | |||||||||||||||||||||         |||||||  |||||||||||||||| ||  |||      
T  43853565 tcaacgttgcagattcggaagcatgcgtattaagatgatttagattttatcatattatttgtcagcattttgttgttgtatgttattaacttggatgttg 43853664  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| |||| |||||||||||||||||  |||||||| |||| |||||||| ||||||||||||| ||||||    
T  43853665 tgagtttgttcgcagattaaccatttacatttttagcgatgttgagtatgttattgtatctgatgtattctatcaatttgaatgaatgaa 43853754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 6155145 - 6155004
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg----tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccg 171  Q
    ||||||| ||||||||| ||||||| || |||    | |||||||||| ||| ||| ||| ||||| |||||||||||||||||||| ||||| ||||      
T  6155145 cattttgtcgttgtatgctattaacttgggtgctactgtgagtttgttcgcagattcaccctttatgtttttagcgatgttgatcattttattgtatcta 6155046  T
Q  172 atgtattatatcaatttgaataaatgaagat-attttgtttt 212  Q
    ||||||| ||||||||||||| |||||| || ||||||||||    
T  6155045 atgtattctatcaatttgaatgaatgaatatcattttgtttt 6155004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 76 - 199
Target Start/End: Complemental strand, 42032451 - 42032327
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatg 174  Q
    ||||||||||||||||| ||||||| ||| |||  |||||||||||||| ||||  | ||||| |||||| |||||||||| ||||||||  ||  ||||    
T  42032451 cattttgccgttgtatgctattaacttgaatgttgtgagtttgtttgcaaatttcacctttatgtttttaacgatgttgattatgttattacatatgatg 42032352  T
Q  175 tattatatcaatttgaataaatgaa 199  Q
    |||| ||||||||||||| ||||||    
T  42032351 tattctatcaatttgaatgaatgaa 42032327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 18935969 - 18936106
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatg 174  Q
    ||||||||  ||||| ||||||||| || ||||  |||||||||||||| ||| ||| | ||| ||||||||||| ||||||||| |||| | || ||||    
T  18935969 cattttgctattgtacgttattaacttgggtgttgtgagtttgtttgcagattcaccctatatgtttttagcgatattgatcatgctattgtctctgatg 18936068  T
Q  175 tattatatcaatttgaataaatgaagatattttgtttt 212  Q
    |||| ||||||||||||| |||||| || |||| ||||    
T  18936069 tattctatcaatttgaatgaatgaatatcttttatttt 18936106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 27652130 - 27652254
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatg 174  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||| ||| ||| | | | ||  ||||||||||| | |||||||||||| | |  ||||    
T  27652130 cattttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcctatacgtttttagcgatatcgatcatgttattgtctttgatg 27652229  T
Q  175 tattatatcaatttgaataaatgaa 199  Q
    |||| ||||||||||||| ||||||    
T  27652230 tattctatcaatttgaatgaatgaa 27652254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 36161851 - 36162022
Alignment:
Q  38 aaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatt 127  Q
    |||||||||||||   ||||||||||||||||||||||         ||||| | |||| |||||||||||| || ||||  ||||||||||  || |||    
T  36161851 aaacatgagtattttcgtgatttagattttatcatattatttgtaggcatttggtcgttatatgttattaacttgggtgttgtgagtttgttcacagatt 36161950  T
Q  128 taccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
     ||  ||||  |||||| ||||||||||||||||||| |||  |||||||| ||||||||||||| ||||||    
T  36161951 cactctttacgtttttaacgatgttgatcatgttattgtatttgatgtattctatcaatttgaatgaatgaa 36162022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 9643532 - 9643643
Alignment:
Q  42 atgagtattccggtgatttagattttatcatattcattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatatt 140  Q
    |||||||||| ||||||||| ||||||||||    ||||||||||| |||| ||||||| || ||||  |||||||||||||| ||||||  |||| | |    
T  9643532 atgagtattctggtgatttaaattttatcatt---attttgccgttatatgctattaacttgggtgttgtgagtttgtttgcaaatttactctttacact 9643628  T
Q  141 tttagcgatgttgat 155  Q
    |||| ||||||||||    
T  9643629 tttatcgatgttgat 9643643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 37465724 - 37465784
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||| ||||||||||||||||||| |||| |||||||| ||||||||| ||| ||||||    
T  37465724 tttttaacgatgttgatcatgttattgtatctgatgtattctatcaatttaaatgaatgaa 37465784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 33332477 - 33332390
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatg 197  Q
    |||||||||| ||| ||| ||| ||||  ||||||||||| |||||||| ||||| | || |||||||| ||||||||||||| ||||    
T  33332477 tgagtttgttcgcaaattcaccctttacgtttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaatg 33332390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 7393424 - 7393502
Alignment:
Q  114 tttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||| ||||||| ||| |||| |||||||||||| ||||||||  |||| |||| ||| |||| |||||||||||||    
T  7393424 tttgttcgcatattcaccctttacatttttagcgatattgatcataatattgtatctgatatattctatcaatttgaat 7393502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 48351049 - 48350999
Alignment:
Q  142 ttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    ||||||||||||||||||| ||| |||| |||||||| |||||||||||||    
T  48351049 ttagcgatgttgatcatgtcattgtatctgatgtattctatcaatttgaat 48350999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 22038793 - 22038736
Alignment:
Q  16 gacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcata 73  Q
    ||||||||||||||| || ||||| |||| ||||| |||||||||| |||||||||||    
T  22038793 gacatcaatgttgcagatccagaagcatgtgtatttcggtgatttaaattttatcata 22038736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 31891274 - 31891088
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| |||||| || ||||| ||||||||||| |||||||||||||| || |||||         ||||||||||||||||| ||||||| || ||| |     
T  31891274 tcaacgttgcaaatccagaagcatgagtattctggtgatttagatttcattatattatttgtaggcattttgccgttgtatgctattaacttgggtgttg 31891175  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgtt----gatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||||||| ||| ||| ||| | ||  ||||||||||| ||    ||||||||| || | || |||||||| |||||||||||||    
T  31891174 tgagtttgttcgcaaattcaccctatacgtttttagcgatattgatcgatcatgtttttgtctctgatgtattctatcaatttgaat 31891088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 2520895 - 2521043
Alignment:
Q  14 tggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatga 104  Q
    ||||| |||| |||||| || | ||| |||| ||||| ||||||||||||||||||| ||||         ||||||||||||||||| ||||||| ||     
T  2520895 tggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagattttatcgtattatttgtaggcattttgccgttgtatgctattaacttgg 2520994  T
Q  105 gtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||| | |||||||||| ||| ||| ||| ||||  ||||||||||||||    
T  2520995 gtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 2521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 21686235 - 21686087
Alignment:
Q  14 tggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatga 104  Q
    ||||| |||| |||||| || | ||| ||||||||||  |||||||||| ||||||||||||         |||||||||| |||||||||||||| ||     
T  21686235 tggacgtcaacgttgcagatccggaagcatgagtattttggtgatttaggttttatcatattatttgtaggcattttgccgctgtatgttattaacttgg 21686136  T
Q  105 gtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||| | |||||||||| ||||||| ||| ||||  ||| ||||||||||    
T  21686135 gtgctgtgagtttgttcgcatattcaccctttacgtttgtagcgatgtt 21686087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 22038696 - 22038618
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaattt 188  Q
    |||||||||| | | ||||||| ||||  |||||||||||||  ||||||||||| |||  |||||||| |||||||||    
T  22038696 tgagtttgttcgtagatttaccctttacgtttttagcgatgtatatcatgttattgtatttgatgtattctatcaattt 22038618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 29960871 - 29960797
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgat 149  Q
    ||||||||||||||||| | ||||| || ||| | |||||||||| ||| ||| ||||||||| |||||||||||    
T  29960871 cattttgccgttgtatgcttttaacttgggtgctgtgagtttgttcgcagattcaccttttatgtttttagcgat 29960797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 47320414 - 47320344
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  ||||| |||| |||||| || ||||| || |||||||| ||||||||||||| |||||||||    
T  47320414 tcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatatt 47320344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 51888177 - 51888143
Alignment:
Q  41 catgagtattccggtgatttagattttatcatatt 75  Q
    ||||||||||| |||||||||||||||||||||||    
T  51888177 catgagtattctggtgatttagattttatcatatt 51888143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 1621398 - 1621309
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| | ||  |||||||| || |||||||||||||| | || |||||||| ||| ||||||||| ||||||    
T  1621398 tgagtttgttcgcagattcaccctatacgtttttagcaatattgatcatgttattgtctctgatgtattctataaatttgaatgaatgaa 1621309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 4142745 - 4142684
Alignment:
Q  14 tggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    ||||| |||| |||||| || |||||||||||||||| |||||| |||  ||||||||||||    
T  4142745 tggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatatt 4142684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 52060812 - 52060751
Alignment:
Q  108 tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatc 169  Q
    |||||||||||||||| ||| || ||||| |||||||| | |||||| ||||||||| ||||    
T  52060812 tatgagtttgtttgcagattcacattttacatttttagtgttgttgaacatgttattgtatc 52060751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 22806788 - 22806848
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||| ||||||||| | ||||||| |||| ||| || | ||||||||||||||||||||    
T  22806788 tttttaacgatgttgaacgtgttattgtatctgatatactttatcaatttgaataaatgaa 22806848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 8914813 - 8915002
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| |||||| || |||||  ||| |||||| |||||||||||||| ||||||||         ||||||||||||||||| ||||||| |||||| |     
T  8914813 tcaacgttgcagatccagaagaatgtgtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatg 8914912  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||||| ||  ||||||||||| ||||| |||||||| | || |||||||| ||||||||||||| ||||||    
T  8914913 tgagtttgttcgcagattcaccttatacgtttttagcgatattgatgatgttattgtctctgatgtattctatcaatttgaatgaatgaa 8915002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 51923813 - 51924030
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgtta 95  Q
    |||||||  ||||| |||| |||||| || ||||| |||| |||||| |||||||||||||| ||||||||         ||||||||||||||||| ||    
T  51923813 tcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgcta 51923912  T
Q  96 ttaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataa 194  Q
    ||||| || ||||  |||||||||| ||||||  | | | ||  ||||||||||| |||||||||||||| | || |||| ||| ||||||||||||| |    
T  51923913 ttaacttgggtgttgtgagtttgttcgcatatccatcctatacgtttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatga 51924012  T
Q  195 atgaagatattttgtttt 212  Q
    ||||| ||  ||||||||    
T  51924013 atgaatatcctttgtttt 51924030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 7546781 - 7546906
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttt-tatatttttagcgatgttgatcatgttattttatccgat 173  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||||||| ||| ||| || ||  ||||||||||| |||||||||| ||| | |  |||    
T  7546781 cattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcacccttatacgtttttagcgatattgatcatgtcattgtctttgat 7546880  T
Q  174 gtattatatcaatttgaataaatgaa 199  Q
    ||||| ||||||||||||||||||||    
T  7546881 gtattttatcaatttgaataaatgaa 7546906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 199
Target Start/End: Complemental strand, 21289736 - 21289612
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatg 174  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||| ||| ||| ||| | ||  ||||||||||| |||||||||||||| | || ||||    
T  21289736 cattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgtttttagcgatattgatcatgttattgtctctgatg 21289637  T
Q  175 tattatatcaatttgaataaatgaa 199  Q
     ||| ||||||||||||| ||||||    
T  21289636 cattctatcaatttgaatgaatgaa 21289612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 42460850 - 42461039
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| |||||| || ||||| |||||  |||| |||||||||||||||||||||||         |||||||  |||||||| ||||||| || ||  |     
T  42460850 tcaacgttgcagatacagaagcatgaacattctggtgatttagattttatcatattatttgtaggcattttgttgttgtatgctattaacttgggtactg 42460949  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| |||| |||| ||||||| |||||||||||||| | || |||||||| | ||||||||||| ||||||    
T  42460950 tgagtttgttcgcagattcaccctttacatttatagcgatattgatcatgttattgtctctgatgtattctgtcaatttgaatgaatgaa 42461039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 192
Target Start/End: Original strand, 16235543 - 16235709
Alignment:
Q  36 agaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcata 125  Q
    |||| |||| |||||| |||||||||||||| ||||||||         ||||||| ||||||||| ||||||| ||  || | |||||||||| ||| |    
T  16235543 agaagcatgggtattctggtgatttagatttcatcatattacttgtaggcattttgtcgttgtatgctattaacttggatggtgtgagtttgttcgcaga 16235642  T
Q  126 tttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||| | ||  ||||||||||| |||||||| ||||| | || |||||||| |||||||||||||    
T  16235643 tttaccctatacgtttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaat 16235709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 21533731 - 21533654
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||| ||| ||||||||||||  ||||||||||||||    
T  21533731 cattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagatttaccttttacgtttttagcgatgtt 21533654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 53508427 - 53508512
Alignment:
Q  114 tttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||| ||| ||| ||| ||||| ||||||||||| |||||||||||||| |||| |||||||| |||||| || ||| ||||||    
T  53508427 tttgttcgcagattcaccctttatgtttttagcgatattgatcatgttattgtatctgatgtattctatcaaattaaatgaatgaa 53508512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 51487211 - 51487251
Alignment:
Q  35 cagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  51487211 cagaaacatgagtattctggtgatttagattttatcatatt 51487251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 52115875 - 52115815
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||||||| |  ||||||||||| | ||||||||||| ||||||||||||||||||||    
T  52115875 tttttagcgatatcaatcatgttattgtctccgatgtattctatcaatttgaataaatgaa 52115815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 53807860 - 53807700
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgtta 95  Q
    |||||||  ||||| |||| ||||||||| ||||| || |||||||| ||||||||||||| |||||||||         ||||||||||||||||| ||    
T  53807860 tcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgcta 53807761  T
Q  96 ttaacatgagt-gtatgagtttgtttgcatatttaccttttatatttttagcgatgttgat 155  Q
    ||||| || || || |||||||||| ||| ||| | | ||||  ||||||||||| |||||    
T  53807760 ttaacttgggtggtgtgagtttgttcgcagattcatcctttacgtttttagcgatcttgat 53807700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 24176018 - 24175959
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatc 169  Q
    |||||||||||||| ||| ||| |||| ||||||||||||||||| ||||||||| ||||    
T  24176018 tgagtttgtttgcaaattcaccctttacatttttagcgatgttgaacatgttattgtatc 24175959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 192
Target Start/End: Original strand, 27856293 - 27856448
Alignment:
Q  47 tattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttacctttta 136  Q
    ||||| |||||||||||||||||||||||         |||||| |||||| ||| ||||||| ||  || | |||||||||| ||| ||| | ||||||    
T  27856293 tattctggtgatttagattttatcatattatttgtaggcatttttccgttgcatgctattaacttggatgatgtgagtttgttcgcagattcatctttta 27856392  T
Q  137 tatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
      ||||||||||| |||||||||||||| | || ||||| || |||||||||||||    
T  27856393 cgtttttagcgatattgatcatgttattgtgtctgatgtgttttatcaatttgaat 27856448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 29922143 - 29922213
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  ||||| |||| |||||| || ||||||||||| | ||| |||||||||||||||||||||||    
T  29922143 tcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcatatt 29922213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 29971296 - 29971366
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  ||||| |||| |||||| || ||||||||||| | ||| |||||||||||||||||||||||    
T  29971296 tcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcatatt 29971366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 41818439 - 41818505
Alignment:
Q  133 tttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||||||||||||| || || |||||||| | || |||||||| ||||||||||||| ||||||    
T  41818439 tttatatttttagcgatattaatgatgttattatctctgatgtattctatcaatttgaatgaatgaa 41818505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 6954618 - 6954541
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||||||| ||| ||| ||||  ||||||||||||||    
T  6954618 cattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 6954541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 27706084 - 27706011
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagatattttgtttt 212  Q
    ||||||||||| | |||||||||||| | || |||||||| ||||||||||||| |||||| ||  ||||||||    
T  27706084 tttttagcgatatcgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatcctttgtttt 27706011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 32701657 - 32701734
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||| ||| ||  || | |||||||||| ||| ||| ||||||||||||||||||||||||    
T  32701657 cattttgccgttgtatgctatgaacttggatgctgtgagtttgttcgcagattcaccttttatatttttagcgatgtt 32701734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 38142726 - 38142810
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcg--atgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||||||||||||||| ||| |||| ||||||||||  ||| ||||||| ||| | ||||  ||||||| |||||||||||||    
T  38142726 tgagtttgtttgcatattcaccctttacatttttagcgatatgctgatcattttactgtatctaatgtattctatcaatttgaat 38142810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 35175490 - 35175650
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgtta 95  Q
    |||||||  |||||||||| |||||| || |  |||||||||||||| | ||||||| |||| ||||||||         ||||||| | ||||||| ||    
T  35175490 tcaatgatttggacatcaacgttgcagatccgaaaacatgagtattctgatgatttatatttcatcatattgtttgtaggcattttgtcattgtatgcta 35175589  T
Q  96 ttaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgat 155  Q
    ||||| |||||||  |||||||||| ||| ||| | ||||||  |||||||||||||||||    
T  35175590 ttaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcgatgttgat 35175650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 628925 - 628855
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  |||||||||| |||| | || ||||| || |||||||| ||||||||||||| |||||||||    
T  628925 tcaatgatttggacatcaacgttgtagatccagaagcaagagtattctggtgatttagattatatcatatt 628855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 3085160 - 3085086
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagat-attttgtttt 212  Q
    |||||||| ||| ||| ||||||||| |||| || ||||| ||||||||||||| |||||| || ||||||||||    
T  3085160 tttttagcaatgatgaccatgttattgtatctgaagtattctatcaatttgaatgaatgaatatcattttgtttt 3085086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 12050635 - 12050493
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagt-gta 109  Q
    |||| |||||| || | |||||||||||||| ||| || |||| ||||||||||||         ||||||| ||||||||||||||||| ||| | ||     
T  12050635 tcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagcattttgtcgttgtatgttattaacttgaatagtg 12050536  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    |||||||||| ||| ||| ||| |||| |||||||| ||||||    
T  12050535 tgagtttgttcgcaaattcaccctttacatttttagagatgtt 12050493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 32460805 - 32460855
Alignment:
Q  114 tttgtttgcatatttaccttttatatttttagcgatgttgatcatgttatt 164  Q
    |||||| ||| |||||||||||| |||||||| ||| ||||||||||||||    
T  32460805 tttgttcgcaaatttaccttttacatttttagtgatattgatcatgttatt 32460855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 48650656 - 48650582
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgat 149  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||| ||| ||| ||| |||| ||||||||||||    
T  48650656 cattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttagcgat 48650582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 4711648 - 4711725
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||||||| ||| | | ||||| ||||||| ||||||    
T  4711648 cattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatcctttatgtttttagtgatgtt 4711725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 40487491 - 40487568
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    |||||||||||| |||||||||||| || ||| | |||||||||| ||| ||| ||  ||||| ||||||||||||||    
T  40487491 cattttgccgttatatgttattaacttgggtgttgtgagtttgttcgcaaattcactctttatgtttttagcgatgtt 40487568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 8e-22; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 48750290 - 48750479
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta- 109  Q
    |||| |||||| || || || |||| |||||| |||||||||||||| ||||||||         ||||||||||||||||| ||||||| || ||||      
T  48750290 tcaacgttgcagatccataagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttg 48750389  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||||||| ||| | ||  ||||||||||| |||||||||||||| | || |||||||| ||||||||||||| ||||||    
T  48750390 tgagtttgttcgcatattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaa 48750479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 199
Target Start/End: Complemental strand, 36775697 - 36775508
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta- 109  Q
    |||| |||||| || |||||||||| |||| |||||||||||||||| ||||||||         ||||||||||||||||| ||||||| ||  |||      
T  36775697 tcaacgttgcagatccagaaacatgggtatcccggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttg 36775598  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| | ||  ||||||||||| |||||||||||||| | || ||||||||  |||||||||||| ||||||    
T  36775597 tgagtttgttcgcagattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattcaatcaatttgaatgaatgaa 36775508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 25564177 - 25564281
Alignment:
Q  85 gttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatc 183  Q
    |||||||||||||||| || ||  |||||||||||| ||  ||||||  |||||||||||| | ||||||||||||| ||| |||| |||||||||||||    
T  25564177 gttgtatgttattaacttgggtcctatgagtttgttcgcggatttactctttatatttttaacaatgttgatcatgtcattgtatcagatgtattatatc 25564276  T
Q  184 aattt 188  Q
    |||||    
T  25564277 aattt 25564281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 31692354 - 31692265
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| || |||||||  || | ||||||| |||||||||||||||||||  ||  |||||||| ||||||||||||||||||||    
T  31692354 tgagtttgttcgcgtatttactcttaacatttttaacgatgttgatcatgttattacatatgatgtattctatcaatttgaataaatgaa 31692265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 41994669 - 41994755
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaat 196  Q
    |||||||||| ||||||| | | |||| |||||||| ||| |||||||||||||| |||| ||| | || |||||||||||||||||    
T  41994669 tgagtttgttcgcatattcatcctttaaatttttagtgattttgatcatgttattgtatctgatattttctatcaatttgaataaat 41994755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 34413086 - 34412925
Alignment:
Q  13 atggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatg 103  Q
    |||||| |||| |||| | || ||||| |||| |||||| |||||||||||||| ||||||||         |||||||| |||||||||||||||| ||    
T  34413086 atggacgtcaacgttgtagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgcggttgtatgttattaacttg 34412987  T
Q  104 agtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttatt 164  Q
     ||||  |||||||||| ||| ||| ||| | ||  ||||||||||| ||||||||||||||    
T  34412986 ggtgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattgatcatgttatt 34412925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 19061008 - 19061159
Alignment:
Q  14 tggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatga 104  Q
    ||||||||||||||| | || |||||  | |||||||| ||||||||||||| |||||||||         ||||||||||||||||| ||||||| ||     
T  19061008 tggacatcaatgttgtagatccagaaggaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttgg 19061107  T
Q  105 gtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgat 155  Q
     || | |||||||||| ||| ||| | ||||||| ||||||||||| |||||    
T  19061108 atgttgtgagtttgttcgcacattcatcttttatgtttttagcgatcttgat 19061159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 50616533 - 50616476
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaat 196  Q
    |||||||| ||||||||||||||||| ||||  ||||||| ||||||||| |||||||    
T  50616533 tttttagcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaat 50616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 50624360 - 50624303
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaat 196  Q
    |||||||| ||||||||||||||||| ||||  ||||||| ||||||||| |||||||    
T  50624360 tttttagcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaat 50624303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 40163298 - 40163239
Alignment:
Q  140 ttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||||||||| | |||||| ||||  ||||||| ||||||||||||| ||||||    
T  40163298 ttttagcgatgttgattaagttattgtatctcatgtattctatcaatttgaatgaatgaa 40163239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 21947540 - 21947466
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgat 149  Q
    |||||||||||||||| |||||||| || ||| | |||||||||| ||| ||||||| |||| ||||||| ||||    
T  21947540 cattttgccgttgtattttattaacttgggtgatgtgagtttgttcgcagatttaccctttacatttttaacgat 21947466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 16989541 - 16989618
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    |||||||||||| |||| ||||||| || ||| | |||||||||||||| ||||||| ||||  ||||||| ||||||    
T  16989541 cattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgtttttagtgatgtt 16989618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 30853658 - 30853629
Alignment:
Q  170 cgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||||||||||||||||||||||||||    
T  30853658 cgatgtattatatcaatttgaataaatgaa 30853629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 35484313 - 35484236
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||| ||| |||  || |||| |||||||||||||||    
T  35484313 cattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgccctttacatttttagcgatgtt 35484236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 24583316 - 24583396
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgat 155  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||| ||| ||| | | |||| |||||||||||| |||||    
T  24583316 cattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttacatttttagcgatcttgat 24583396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 43833965 - 43833801
Alignment:
Q  36 agaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcata 125  Q
    |||| ||||||||||| |||||||||| ||||||||||||         ||||||||||||||||| ||||||| || ||| | |||||||||||||| |    
T  43833965 agaagcatgagtattctggtgatttagtttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcaga 43833866  T
Q  126 tttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttga 190  Q
    || ||| ||||  ||||||||||| |||||||||||||| | |  |||||||| |||||||||||    
T  43833865 ttcaccatttacttttttagcgatattgatcatgttattgtctttgatgtattctatcaatttga 43833801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 8867936 - 8868101
Alignment:
Q  47 tattccggtgatttagattttatcatatt---------cattttgccgttgtatgttatt---aacatgagtg-tatgagtttgtttgcatatttacctt 133  Q
    ||||| |||||||||||||||||||||||         ||||||| ||||||||||||||   ||| || ||| | |||||||||| ||| ||| |||||    
T  8867936 tattctggtgatttagattttatcatattatttgtaggcattttgtcgttgtatgttatttataacttgggtggtgtgagtttgttcgcaaattcacctt 8868035  T
Q  134 ttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||  |||||||| ||||||||||||||||| |||| |||||||| ||||||||||||| ||||||    
T  8868036 ttacgtttttagcaatgttgatcatgttattgtatctgatgtattctatcaatttgaatgaatgaa 8868101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 14585775 - 14585970
Alignment:
Q  14 tggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatga 104  Q
    ||||| |||| |||||| || ||||| |||| |||| | |||||||||||||| ||||||||         | ||||||||||||||| ||||||| ||     
T  14585775 tggacgtcaacgttgcagatccagaagcatgggtatcctggtgatttagatttcatcatattatttgtaggcgttttgccgttgtatgctattaacttgg 14585874  T
Q  105 gtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||| | |||||||||| ||| ||| ||| | ||  ||||||||||| |||||||||||||| | || |||||||| ||||||||||||| ||||||    
T  14585875 gtgctgtgagtttgttcgcagattcaccctatacgtttttagcgatattgatcatgttattatctctgatgtattctatcaatttgaatgaatgaa 14585970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 199
Target Start/End: Complemental strand, 18890684 - 18890495
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| |||||| || |||||||||  |||||  |||||||||||||||||||||||         ||||||| ||||||||| ||||||| || ||| |     
T  18890684 tcaacgttgcagatccagaaacataggtattatggtgatttagattttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctg 18890585  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| | |   ||||||||||| || ||||||||||| | || |||||||| ||||||||||||| ||||||    
T  18890584 tgagtttgttcgcagattcaccctatccgtttttagcgatattaatcatgttattgtctctgatgtattctatcaatttgaatgaatgaa 18890495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 41896619 - 41896822
Alignment:
Q  18 catcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgt 108  Q
    |||||| |||||| ||  |||| ||||||||||| |||||||||||||| ||||||||         ||||||| ||||||||| ||||||| || ||||    
T  41896619 catcaacgttgcagatctagaagcatgagtattctggtgatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgt 41896718  T
Q  109 a-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagatatttt 207  Q
      |||||||||| ||| ||| ||| | ||  |||||||| || ||||||||||||||   || |||||||| ||||||||||||| |||||| ||  |||    
T  41896719 tgtgagtttgttcgcagattcaccctatacgtttttagcaatattgatcatgttattgc-tctgatgtattctatcaatttgaatgaatgaatattcttt 41896817  T
Q  208 gtttt 212  Q
    |||||    
T  41896818 gtttt 41896822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 42046325 - 42046527
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    ||||||||||| || ||||| |||| |||||| |||||||||||||| ||||||||         ||||||| | | ||||| ||||||| || ||| |     
T  42046325 tcaatgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgacatcgtatgctattaacttgggtgttg 42046424  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagatattttgt 209  Q
    |||||||||| ||| ||| ||| | ||  ||||||||||| |||||||||||||| |  | |||||||| |||| |||||||| |||||| ||  |||||    
T  42046425 tgagtttgttcgcagattcaccctatacgtttttagcgatattgatcatgttattgtcactgatgtattctatcgatttgaatgaatgaatatcctttgt 42046524  T
Q  210 ttt 212  Q
    |||    
T  42046525 ttt 42046527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 26469035 - 26468946
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||| ||| || ||| ||| ||||  |||||||| ||||| ||||||||||| |||  ||||||||| || ||||||||||||||||    
T  26469035 tgagtttatttacagattcaccatttacgtttttagcaatgttaatcatgttattatatatgatgtattacattaatttgaataaatgaa 26468946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 18846325 - 18846265
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||| ||||||||||| |||||| |||| ||||||||||||||| || ||| ||||||    
T  18846325 tttttagtgatgttgatcaagttattgtatctgatgtattatatcaaattaaatgaatgaa 18846265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 34609959 - 34609995
Alignment:
Q  39 aacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||||||||||||||||||| ||||||||||||    
T  34609959 aacatgagtattccggtgatttaggttttatcatatt 34609995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 471082 - 470995
Alignment:
Q  78 ttttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttatt 164  Q
    ||||| || |||||||||||||| || ||| | ||| |||||| | | ||| || |||||| ||||||||||||||||||||||||||    
T  471082 ttttgtcgatgtatgttattaacttgggtgatgtgattttgttcgtagattcacattttatgtttttagcgatgttgatcatgttatt 470995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 19443919 - 19443860
Alignment:
Q  140 ttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||| ||||||||| ||||||||| |||| |||||| | ||||||||||||| ||||||    
T  19443919 ttttaacgatgttgaacatgttattatatctgatgtactctatcaatttgaatgaatgaa 19443860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15344397 - 15344467
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  ||||| |||| |||||| || ||||| || |||||||| ||||||||||||| |||||||||    
T  15344397 tcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatatt 15344467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15433462 - 15433532
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  ||||| |||| |||||| || ||||| || |||||||| ||||||||||||| |||||||||    
T  15433462 tcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatatt 15433532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15524766 - 15524836
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  ||||| |||| |||||| || ||||| || |||||||| ||||||||||||| |||||||||    
T  15524766 tcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatatt 15524836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 39657543 - 39657613
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||  ||||| |||| |||||| || ||||| |||| |||||| |||||||||||||| ||||||||    
T  39657543 tcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatatt 39657613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 5046930 - 5047011
Alignment:
Q  84 cgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttatt 164  Q
    ||||||||||||||||| || ||| | |||||||||| | | ||||| | |||||||||||||  ||||||| |||||||||    
T  5046930 cgttgtatgttattaacttgggtgatgtgagtttgttcgaagatttatcatttatatttttagtaatgttgaacatgttatt 5047011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 34610069 - 34610122
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||||| || || || |||||||| |||| ||||||||||||||||||||||    
T  34610069 tttttagcaatattaatgatgttattgtatctgatgtattatatcaatttgaat 34610122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 1236697 - 1236629
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcata 73  Q
    |||||||  ||||| |||| |||||| || ||||| || |||||||| ||||||||||||| |||||||    
T  1236697 tcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcata 1236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 1239397 - 1239329
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcata 73  Q
    |||||||  ||||| |||| |||||| || ||||| || |||||||| ||||||||||||| |||||||    
T  1239397 tcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcata 1239329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 34493171 - 34493287
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatg 174  Q
    ||||||| ||||| ||||||||||| ||||| |  |||||||||| | | ||| ||| ||| | |||||||||||||| |||||||| || |||  |||     
T  34493171 cattttgtcgttgcatgttattaacttgagttttgtgagtttgttcgtagattcaccctttttgtttttagcgatgttaatcatgttgttgtatgtgata 34493270  T
Q  175 tattatatcaatttgaa 191  Q
     ||| ||||||||||||    
T  34493271 cattttatcaatttgaa 34493287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 2979293 - 2979091
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta- 109  Q
    |||| |||||| || ||||| || | |||||| |||||||||||||| ||||||||         |||| |||||||||||| ||||||| ||  |||      
T  2979293 tcaacgttgcagatccagaagcacgggtattctggtgatttagatttcatcatattatttgtaggcattgtgccgttgtatgctattaacttggatgttg 2979194  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagatattttgt 209  Q
    |||||||||| ||| ||| ||| | || |||||||||||| |||||||||||||| | || |||||||| |||||||||||||||||||| || |||| |    
T  2979193 tgagtttgttcgcagattcaccctatacatttttagcgatattgatcatgttattgtttctgatgtattctatcaatttgaataaatgaatatcttttat 2979094  T
Q  210 ttt 212  Q
    |||    
T  2979093 ttt 2979091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 19103454 - 19103272
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    ||||| ||||| || ||||| |||||||||||||||||||||||||| ||||||||         |||||| |||||||||| ||||||| |  ||| ||    
T  19103454 tcaatattgcagatccagaagcatgagtattccggtgatttagatttcatcatattatttataggcatttttccgttgtatgctattaactttggtgcta 19103355  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||||||| ||| ||| | | | ||  ||||||||||| |||||||||||||| | || |||||||| |||||||||||||    
T  19103354 tgagtttgttcgcagattcatcctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaat 19103272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 14211313 - 14211517
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgtta 95  Q
    |||||||  ||||| |||| |||||| || ||||| |||| |||||| |||||||||||||| ||||||||         |||||| | |||||||| ||    
T  14211313 tcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttttctgttgtatgcta 14211412  T
Q  96 ttaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataa 194  Q
    ||||| || ||||  |||||||||| ||| ||| ||| | ||  ||||||||||| ||||||||| |||| | |  |||||||||||||||||||||| |    
T  14211413 ttaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattgatcatgctattgtctatgatgtattatatcaatttgaatga 14211512  T
Q  195 atgaa 199  Q
    |||||    
T  14211513 atgaa 14211517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 39567356 - 39567560
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgtta 95  Q
    |||||||  ||||| ||||  ||||| || |||||||||| |||||| |||||||||||||| ||||||||         ||||||| ||||||||||||    
T  39567356 tcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttagatttcatcatattatttgtagacattttgtcgttgtatgtta 39567455  T
Q  96 ttaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataa 194  Q
    ||| | || ||||  |||||||||| | | ||| ||| | ||  ||||||| ||| |||||||||||||| | |  |||||||||||||||||||||| |    
T  39567456 ttaccttgggtgttgtgagtttgttcgtagattcaccatatacgtttttagtgatattgatcatgttattgtctttgatgtattatatcaatttgaatga 39567555  T
Q  195 atgaa 199  Q
    |||||    
T  39567556 atgaa 39567560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 199
Target Start/End: Complemental strand, 28540893 - 28540704
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtg-ta 109  Q
    |||| |||||| || ||||| |||| |||||  |||||||||||||| ||||||||         |||||| |||||||||| ||||||| || ||| |     
T  28540893 tcaacgttgcagatccagaagcatgggtattttggtgatttagatttcatcatattatttgtagacatttttccgttgtatgctattaacttgggtgctg 28540794  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| | ||  ||||||||||| |||||||||||||| | |  |||||||| ||||||||| ||| ||||||    
T  28540793 tgagtttgttcgcagattcaccctatacgtttttagcgatattgatcatgttattgtctttgatgtattttatcaatttaaatgaatgaa 28540704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 35920879 - 35920794
Alignment:
Q  114 tttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||  ||||| ||||||||||  |||||||||| ||| |||| |||||||||||||||||||| | ||||||    
T  35920879 tttgtttgcagattcacactttatgtttttagcgacattgatcatgtgattgtatctgatgtattatatcaatttgattgaatgaa 35920794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 13007395 - 13007472
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||||||| ||| ||| ||||  ||||||||||||||    
T  13007395 cattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 13007472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 8088214 - 8088063
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgtta 95  Q
    |||||||  ||||| |||| |||||| || || ||||| |||||||| ||||||||||||| |||||||||         ||||||||| ||||||| ||    
T  8088214 tcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagattatatcatattatttgtaggcattttgcctttgtatgcta 8088115  T
Q  96 ttaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagc 146  Q
    ||||| || ||| |||||||||||| ||| ||| | ||||||  ||||||||    
T  8088114 ttaacttgggtgttatgagtttgttcgcagattcatcttttacctttttagc 8088063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 19121113 - 19121202
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| ||||  |||| || |||||||  ||||||||| |||| |||||| | ||||||||||||| ||||||    
T  19121113 tgagtttgttcgcagattcaccctttacgttttcagagatgttggacatgttattgtatctgatgtagtttatcaatttgaatgaatgaa 19121202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 25980323 - 25980400
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    |||||||||||| |||| ||||||| || ||| | |||||||||||||| ||| ||| ||||  ||||||||||||||    
T  25980323 cattttgccgttatatgctattaacttgggtgatgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 25980400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 38597963 - 38598040
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||| ||| ||| ||| ||||  ||||||||||||||    
T  38597963 cattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttagcgatgtt 38598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 10237219 - 10237002
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgtta 95  Q
    |||||||  ||||| |||| |||||| || ||||| |||| |||||| | |||||||||||| ||||||||         ||||||| ||||||||| ||    
T  10237219 tcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatgatttagatttcatcatattatttgtaggcattttgtcgttgtatgcta 10237120  T
Q  96 ttaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataa 194  Q
    ||||| || ||||  |||||||||| ||| ||| ||| | ||  ||||||||||| |||||||||||||| | || |||||||| ||||||||||||| |    
T  10237119 ttaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatga 10237020  T
Q  195 atgaagatattttgtttt 212  Q
    ||||| ||  ||||||||    
T  10237019 atgaatatcctttgtttt 10237002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 14955641 - 14955844
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgta- 109  Q
    |||| |||||| || |||||||||| |||||| | |||||||||||||||||||||         ||||||  | ||||||||||||||| |  ||||      
T  14955641 tcaacgttgcagatccagaaacatgtgtattctgatgatttagattttatcatattatttgtagacattttatcattgtatgttattaacttaggtgttg 14955740  T
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagat-attttg 208  Q
    |||||||||| ||| ||| | | ||||||||||||||||| |||||||||||||| | ||  ||||||| ||||||||| ||| |||||| || ||||||    
T  14955741 tgagtttgttcgcagattcatcctttatatttttagcgatattgatcatgttattgtctcttatgtattctatcaatttaaatgaatgaatatcattttg 14955840  T
Q  209 tttt 212  Q
    ||||    
T  14955841 tttt 14955844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 3309121 - 3309246
Alignment:
Q  75 tcattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgat 173  Q
    |||||||||||||||||| ||||||| || ||| | ||||||| || ||| ||| ||| | ||  ||||||||||| |||||||||||||| | || |||    
T  3309121 tcattttgccgttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctatacgtttttagcgatattgatcatgttattgtctctgat 3309220  T
Q  174 gtattatatcaatttgaataaatgaa 199  Q
    ||||| ||||||||||||| ||||||    
T  3309221 gtattctatcaatttgaatgaatgaa 3309246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 28533876 - 28533764
Alignment:
Q  77 attttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgt 175  Q
    |||||| ||||||||| ||||||| |||||||  |||||||||| ||| ||  ||||||||  |||||| |||||||||||||||||||  ||| |||||    
T  28533876 attttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgcagatccaccttttacgtttttaacgatgttgatcatgttattgaatctgatgt 28533777  T
Q  176 attatatcaattt 188  Q
    ||| |||||||||    
T  28533776 attctatcaattt 28533764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 19595788 - 19595705
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatattttt-agcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    |||||||||||||| ||||| | ||| | ||||| |||||| |||||||||||||| |||| ||| ||||||||||||||||||    
T  19595788 tgagtttgtttgcagatttatcatttttcttttttagcgatcttgatcatgttattgtatctgatatattatatcaatttgaat 19595705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 37416887 - 37417010
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgt-atgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatg 174  Q
    ||||||||||||||||||| ||||| || |||| || |||||||| ||| ||| |||||| || |||| | | |||||||||||||||||  |||  |||    
T  37416887 cattttgccgttgtatgttgttaacttgggtgttataagtttgttcgcacattcaccttt-atgttttaaacaatgttgatcatgttattggatctaatg 37416985  T
Q  175 tattatatcaatttgaataaatgaa 199  Q
    ||||  |||||||||||| ||||||    
T  37416986 tattccatcaatttgaatgaatgaa 37417010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 14416399 - 14416470
Alignment:
Q  142 ttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaagat-attttgtttt 212  Q
    ||||||||||||| ||||||||| |||| |||||||| ||||||||||||| ||| || || ||||||||||    
T  14416399 ttagcgatgttgaacatgttattgtatctgatgtattctatcaatttgaatgaataaatatcattttgtttt 14416470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 7677796 - 7677719
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||| ||||||| || ||| | ||||||||||||||  || ||||||||  ||||||||||||||    
T  7677796 cattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcaagttcaccttttacgtttttagcgatgtt 7677719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 10929762 - 10929922
Alignment:
Q  5 tcaatgagatggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgtta 95  Q
    |||||||  |||||||||| |||||| || | ||| |||| |||||| ||||||||| |||||||||||||         |||||||  |||| ||| ||    
T  10929762 tcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgatttaaattttatcatattatttataggcattttgttgttgaatgcta 10929861  T
Q  96 ttaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgttgat 155  Q
    ||||| ||  || | |||||||||||||||||| ||| ||||| ||||||||||| |||||    
T  10929862 ttaacttggatgctgtgagtttgtttgcatattcaccctttatgtttttagcgatcttgat 10929922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 19598016 - 19598138
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatg 174  Q
    |||||| |||||||||| ||||||| |||||||  ||| |||||| |||||||   | ||||  ||||| || ||||||||||||||||| ||||  ||     
T  19598016 cattttaccgttgtatgctattaacttgagtgttgtgaatttgttcgcatattnttcatttacgttttttgcaatgttgatcatgttattatatcttata 19598115  T
Q  175 tattatatcaatttgaataaatg 197  Q
    |||| ||||||||| ||| ||||    
T  19598116 tattctatcaattttaatgaatg 19598138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 7646655 - 7646729
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgat 149  Q
    ||||||||||||||||| ||||||| || ||| | |||||||||| ||| ||| ||||||||  |||||||||||    
T  7646655 cattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttacgtttttagcgat 7646729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 3460527 - 3460580
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaat 192  Q
    ||||||||||| |||||||||||||| | || ||| |||| |||||||||||||    
T  3460527 tttttagcgatattgatcatgttattgtctctgatatattctatcaatttgaat 3460580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 4778930 - 4779007
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||||||||||  || ||| | |||||||||| ||| ||| ||| ||||  ||||||||||||||    
T  4778930 cattttgccgttgtatgttattaatttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 4779007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 199
Target Start/End: Complemental strand, 12554104 - 12553979
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttttatattttt-agcgatgttgatcatgttattttatccgat 173  Q
    ||||||| ||||||||| ||||||| || ||||  |||||||||| ||| ||| ||| ||||  ||||| ||| |||||||  |||||||| |||| |||    
T  12554104 cattttgtcgttgtatgatattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttttagcaatgttgaatatgttattgtatctgat 12554005  T
Q  174 gtattatatcaatttgaataaatgaa 199  Q
     || | ||||||||||||| ||||||    
T  12554004 atactctatcaatttgaatgaatgaa 12553979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 25508991 - 25508914
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtg-tatgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||||||||||||||||||||| || ||| | |||||||||| ||| ||| | | ||||| |||||| |||||||    
T  25508991 cattttgccgttgtatgttattaacttgggtgatgtgagtttgttcgcagattcatcgtttatgtttttaccgatgtt 25508914  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 37994423 - 37994451
Alignment:
Q  47 tattccggtgatttagattttatcatatt 75  Q
    |||||||||||||||||||||||||||||    
T  37994423 tattccggtgatttagattttatcatatt 37994451  T

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Target: scaffold0039 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 93338 - 93397
Alignment:
Q  140 ttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||||| ||||||    
T  93338 ttttagcgatgtttatcatgttattttatctgatgtattttatcaatttgaatgaatgaa 93397  T

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Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 93204 - 93264
Alignment:
Q  15 ggacatcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||| |||| |||||| || |||||| ||| |||||| ||||||||| |||||||||||||    
T  93204 ggacgtcaacgttgcagatccagaaatatgggtattctggtgatttaaattttatcatatt 93264  T

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Target: scaffold0884 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 1942 - 1818
Alignment:
Q  38 aaacatgagtattccggtgatttagattttatcatatt---------cattttgccgttgtatgttattaacatgagtgt-atgagtttgtttgcatatt 127  Q
    |||||| |||||| ||||||||||| ||||||||||||         |||||||| |||||||||||||||| || |||| ||||||||||| ||| |||    
T  1942 aaacataagtatttcggtgatttaggttttatcatattatttgtaggcattttgctgttgtatgttattaacttgggtgttatgagtttgttcgcagatt 1843  T
Q  128 taccttttatatttttagcgatgtt 152  Q
     ||| ||||  ||||||||||||||    
T  1842 caccctttacgtttttagcgatgtt 1818  T

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Target: scaffold0021 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 4377 - 4437
Alignment:
Q  139 tttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||||||| ||||| |||||||| |||| |||||||| ||||||||||||| ||||||    
T  4377 tttttagcgatattgatgatgttattgtatctgatgtattttatcaatttgaatgaatgaa 4437  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 65964 - 65887
Alignment:
Q  76 cattttgccgttgtatgttattaacatgagtgt-atgagtttgtttgcatatttaccttttatatttttagcgatgtt 152  Q
    ||||||| ||||||||| ||||||| ||||||| ||||||||||| ||| ||| ||| |||| ||||||| |||||||    
T  65964 cattttgtcgttgtatgctattaacttgagtgttatgagtttgttcgcagattcaccctttacatttttaccgatgtt 65887  T

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Target: scaffold0888 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 1650 - 1610
Alignment:
Q  35 cagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  1650 cagaaacatgggtattctggtgatttagattttatcatatt 1610  T

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Target: scaffold0888; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 1565 - 1476
Alignment:
Q  110 tgagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    |||||||||| ||| ||| ||| | ||  |||| || ||| |||||||||||||| | || |||||||| ||||||||||||| ||||||    
T  1565 tgagtttgttcgcagattcaccctatacgttttaagggatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaa 1476  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 199
Target Start/End: Complemental strand, 3931 - 3843
Alignment:
Q  111 gagtttgtttgcatatttaccttttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttgaataaatgaa 199  Q
    ||||||| | ||| ||||||| |||| |||||||||||||| |||||  ||||| |||| |||| | | ||||||||||||| ||||||    
T  3931 gagtttgatcgcagatttaccctttacatttttagcgatgtcgatcactttattgtatcagatgaactctatcaatttgaatgaatgaa 3843  T

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Target: scaffold0347 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 6132 - 6187
Alignment:
Q  20 tcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    ||||||||||| || | ||| |||| |||||| |||||||||||||||||||||||    
T  6132 tcaatgttgcagatccggaagcatgtgtattctggtgatttagattttatcatatt 6187  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 31263 - 31206
Alignment:
Q  18 catcaatgttgcatattcagaaacatgagtattccggtgatttagattttatcatatt 75  Q
    ||||||||||||| || | ||| |||| ||||| |||||| |||||||||||||||||    
T  31263 catcaatgttgcagatccggaagcatgggtatttcggtgacttagattttatcatatt 31206  T

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Target: scaffold0603 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 7883 - 8007
Alignment:
Q  77 attttgccgttgtatgttattaacatgagtgta-tgagtttgtttgcatatttaccttt-tatatttttagcgatgttgatcatgttattttatccgatg 174  Q
    |||||||  ||||||||||||||| || ||||  |||||||||| ||||||| ||| || ||  |||||||| ||||| | || |||||| |||  ||||    
T  7883 attttgctattgtatgttattaacttgggtgttgtgagtttgttcgcatattcacccttgtacgtttttagcaatgttaaacaagttattgtatttgatg 7982  T
Q  175 tattatatcaatttgaataaatgaa 199  Q
    || | ||||||||||||| ||||||    
T  7983 tactctatcaatttgaatgaatgaa 8007  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 18947 - 18891
Alignment:
Q  133 tttatatttttagcgatgttgatcatgttattttatccgatgtattatatcaatttg 189  Q
    |||| ||||| || |||||||||||||||||| |||| |||||||| |||| |||||    
T  18947 tttagattttcagggatgttgatcatgttattgtatctgatgtattctatcgatttg 18891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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