View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9595A_low_209 (Length: 245)
Name: NF9595A_low_209
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9595A_low_209 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 41 - 245
Target Start/End: Original strand, 32024572 - 32024776
Alignment:
| Q |
41 |
gatatggttgttatgtagaagtagttcttttactgtctagttaatgatttgtgccttaggtagctaagcttatttgctgttgtgtaagaatgatccttta |
140 |
Q |
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| T |
32024572 |
gatatggttgttatgtagaagtagttcttttactgtctagttaatgatttgtgccttaggtagctaagcttatttgctgttgtgtaagaatgatccttta |
32024671 |
T |
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| Q |
141 |
caatgcatataatacttagtgcttgtttggtttggcttcgtggtgtacaaaaacccacattaacgcggaagctccacttggtagcttctaattttcactt |
240 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
32024672 |
caatgcatataatacttagtgcttgtttggtttggcttcgtggtgtacaaaaacccacattaacgcggacgctccacttggtagcttctaattttcactt |
32024771 |
T |
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| Q |
241 |
caaaa |
245 |
Q |
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||||| |
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| T |
32024772 |
caaaa |
32024776 |
T |
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