View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9595A_low_248 (Length: 237)
Name: NF9595A_low_248
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9595A_low_248 |
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Alignment Details
Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 38093121 - 38092931
Alignment:
| Q |
21 |
tattcaaggaaattttgcaacaagaacaaatattcctggatcccacaatttgaatgaagatcttgttctcatagacgtatcaaattgtccgaaggaatcc |
120 |
Q |
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| T |
38093121 |
tattcaaggaaattttgcaactagaacaaatattcgtggatcccacaatttgaatgaagatcttgttctcatagacgtatcgaattgtccgaaggaatcc |
38093022 |
T |
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| Q |
121 |
cattgtttccttttt-ccaatatttctcattcaagaaaacaacatatagggtttctttccttctgcaccctttgagtcaattctgcatgctttgtt |
215 |
Q |
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| T |
38093021 |
cattgtttccttttttccaatatttctcattcaagaaaacaacatatagggtttcttg-----tgcaccctttgagtcaattctgcatgctttgtt |
38092931 |
T |
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