View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9595A_low_278 (Length: 229)
Name: NF9595A_low_278
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9595A_low_278 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 32739077 - 32738871
Alignment:
| Q |
17 |
ctcttttcaatctctcttctctccttcttcactcaactcatgggcacaagcagcgacccaacccaagacccttccgacgagcaacaaaaacgttccgaaa |
116 |
Q |
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| T |
32739077 |
ctcttttcaatctctcttttctccttcctcactcaactcatgggcacaagcagcgacccaacccaagacacttccgacgagcaacaaaaacgttccgaaa |
32738978 |
T |
|
| Q |
117 |
tctacacttacgaagcaccatggcacatctacgctatgaactggagcgtccgtcgcgacaaaaaatatcgcctctctatcgcttctctcttagaacaata |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
32738977 |
tctacacttacgaagcaccatggcacatctacgctatgaactggagcgtccgtcgcgacaaaaaatatcgcctcgctatcgcttctctcttagaacaata |
32738878 |
T |
|
| Q |
217 |
ccctaac |
223 |
Q |
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||||||| |
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| T |
32738877 |
ccctaac |
32738871 |
T |
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