View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9595A_low_32 (Length: 396)
Name: NF9595A_low_32
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9595A_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 3 - 377
Target Start/End: Complemental strand, 45675740 - 45675366
Alignment:
| Q |
3 |
ctgagaacaatgacaatgacacaccaaatattcagattcaaaaaacctctgtgggatccaatgaagtgaagaatctatttgatgatacaccaaatccaaa |
102 |
Q |
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| T |
45675740 |
ctgagaacaatgacaatgacacaccaaatattcagattcaaaaaacctctgtgggatccaatgaagtgaagaatctatttgatgatacaccaaatccaaa |
45675641 |
T |
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| Q |
103 |
ttctattccaatggataattgtaattatccccttgaaattaattcaaaaatcaacaactcagttaattgcttcacaccttgtgataatatggttggatta |
202 |
Q |
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| T |
45675640 |
ttctattccaatggataattgtaattatccccttgaaattaattcaaaaatcaacaactcggttaattgcttcataccttgtgataatatggttggatta |
45675541 |
T |
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| Q |
203 |
ggaggaggatcatatctcaattttcaacaacttaactatggaatcaataacatgactctatctcctccaaattccaacagcaacaattcactttgcttca |
302 |
Q |
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| T |
45675540 |
ggaggaggatcatatctcaattttcaacaacttaactatggaatcaataacatgactctatctcctccaaattccaacagcaacacttcactttgcttca |
45675441 |
T |
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| Q |
303 |
taccaagtactagtggttccacttctacttgctctcaaatgatgtcagaattaaattcttccaccatgttccatt |
377 |
Q |
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| T |
45675440 |
taccaagtactagtggttccacttctacttgctctcaaatgatgtcagaattaaattcttccaccatgttccatt |
45675366 |
T |
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