View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9595A_low_37 (Length: 387)

Name: NF9595A_low_37
Description: NF9595A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9595A_low_37
NF9595A_low_37
[»] chr7 (49 HSPs)
chr7 (5-283)||(22564231-22564508)
chr7 (315-362)||(3948051-3948098)
chr7 (307-361)||(44106617-44106671)
chr7 (312-366)||(15913545-15913599)
chr7 (313-358)||(22267576-22267621)
chr7 (314-362)||(25246767-25246815)
chr7 (321-365)||(45425456-45425500)
chr7 (324-379)||(44941413-44941468)
chr7 (316-362)||(1285086-1285132)
chr7 (315-365)||(8879761-8879811)
chr7 (313-366)||(34807213-34807267)
chr7 (316-374)||(43680995-43681053)
chr7 (317-366)||(38911298-38911347)
chr7 (313-362)||(42829251-42829300)
chr7 (324-364)||(27908735-27908775)
chr7 (313-361)||(29734808-29734856)
chr7 (313-361)||(32062018-32062066)
chr7 (313-373)||(35142155-35142215)
chr7 (313-365)||(44454507-44454559)
chr7 (313-364)||(1399157-1399208)
chr7 (313-364)||(19599140-19599191)
chr7 (323-366)||(19684225-19684268)
chr7 (313-364)||(20085774-20085824)
chr7 (318-365)||(23221392-23221439)
chr7 (317-360)||(29461840-29461883)
chr7 (313-364)||(35222919-35222970)
chr7 (312-362)||(9819566-9819616)
chr7 (312-362)||(10721491-10721541)
chr7 (316-374)||(22564147-22564205)
chr7 (316-374)||(30622970-30623028)
chr7 (316-374)||(42435403-42435461)
chr7 (314-364)||(44558789-44558839)
chr7 (328-373)||(1311808-1311853)
chr7 (316-365)||(5317302-5317351)
chr7 (313-362)||(8683065-8683114)
chr7 (316-365)||(30463385-30463434)
chr7 (313-366)||(30857243-30857296)
chr7 (313-365)||(4047781-4047832)
chr7 (313-365)||(7388053-7388105)
chr7 (313-365)||(16355508-16355560)
chr7 (324-364)||(33781496-33781536)
chr7 (317-373)||(35165532-35165588)
chr7 (313-365)||(36032927-36032979)
chr7 (313-365)||(36755010-36755061)
chr7 (313-365)||(36760807-36760858)
chr7 (313-357)||(36803833-36803877)
chr7 (312-356)||(46551869-46551913)
chr7 (313-365)||(48103688-48103740)
chr7 (312-364)||(49172301-49172352)
[»] chr8 (49 HSPs)
chr8 (313-374)||(7553674-7553735)
chr8 (312-365)||(28084276-28084329)
chr8 (315-364)||(1877677-1877726)
chr8 (313-374)||(3672621-3672682)
chr8 (313-364)||(6447184-6447235)
chr8 (313-364)||(17062354-17062405)
chr8 (313-364)||(17585953-17586004)
chr8 (313-364)||(29376896-29376947)
chr8 (313-364)||(37015851-37015902)
chr8 (315-374)||(42700502-42700561)
chr8 (317-367)||(15079164-15079214)
chr8 (313-374)||(1230666-1230727)
chr8 (309-357)||(7404768-7404817)
chr8 (312-365)||(8717489-8717542)
chr8 (312-365)||(12714384-12714437)
chr8 (313-361)||(5325525-5325573)
chr8 (317-365)||(14279585-14279633)
chr8 (312-364)||(22948096-22948148)
chr8 (313-361)||(32223897-32223945)
chr8 (313-364)||(11708981-11709032)
chr8 (313-364)||(11771702-11771753)
chr8 (313-364)||(13357456-13357507)
chr8 (313-364)||(27718909-27718960)
chr8 (313-364)||(33987752-33987803)
chr8 (313-364)||(39821879-39821930)
chr8 (312-366)||(26991770-26991824)
chr8 (316-374)||(29186500-29186558)
chr8 (309-374)||(6833825-6833889)
chr8 (312-373)||(10152450-10152511)
chr8 (318-363)||(13105094-13105139)
chr8 (313-362)||(13286126-13286175)
chr8 (313-362)||(13575284-13575333)
chr8 (313-358)||(17694436-17694481)
chr8 (315-364)||(19701359-19701408)
chr8 (315-364)||(33482164-33482213)
chr8 (313-374)||(42200667-42200728)
chr8 (321-374)||(43778022-43778075)
chr8 (313-361)||(6471506-6471554)
chr8 (313-373)||(12910812-12910872)
chr8 (313-364)||(15310317-15310369)
chr8 (313-364)||(15490686-15490738)
chr8 (313-373)||(17002345-17002405)
chr8 (312-364)||(17704007-17704059)
chr8 (316-364)||(28439957-28440005)
chr8 (312-364)||(29652212-29652264)
chr8 (315-363)||(31511968-31512016)
chr8 (313-373)||(32555249-32555309)
chr8 (313-364)||(34997453-34997505)
chr8 (313-373)||(37999426-37999486)
[»] chr6 (33 HSPs)
chr6 (313-366)||(331899-331952)
chr6 (313-364)||(24373725-24373776)
chr6 (315-364)||(1918473-1918522)
chr6 (313-372)||(7081661-7081720)
chr6 (313-364)||(12412272-12412323)
chr6 (314-365)||(14552333-14552384)
chr6 (312-361)||(12028-12077)
chr6 (319-364)||(21941474-21941519)
chr6 (317-364)||(4450261-4450308)
chr6 (313-364)||(13496111-13496162)
chr6 (313-364)||(18256878-18256929)
chr6 (329-372)||(28046185-28046228)
chr6 (315-374)||(29283812-29283871)
chr6 (318-372)||(2617212-2617266)
chr6 (316-362)||(3373398-3373444)
chr6 (328-374)||(14049889-14049935)
chr6 (310-360)||(15046935-15046985)
chr6 (313-374)||(866290-866351)
chr6 (313-374)||(1989048-1989108)
chr6 (317-358)||(6470637-6470678)
chr6 (313-358)||(7281419-7281464)
chr6 (313-366)||(12735256-12735309)
chr6 (313-346)||(27928142-27928175)
chr6 (312-365)||(28951393-28951446)
chr6 (328-364)||(334150-334186)
chr6 (313-365)||(788861-788913)
chr6 (315-363)||(10780123-10780171)
chr6 (313-357)||(12336348-12336392)
chr6 (313-373)||(15291696-15291756)
chr6 (328-364)||(28231440-28231476)
chr6 (313-365)||(31140826-31140878)
chr6 (313-365)||(32053783-32053835)
chr6 (309-361)||(32524438-32524490)
[»] chr5 (41 HSPs)
chr5 (313-374)||(40445978-40446039)
chr5 (317-365)||(34206226-34206274)
chr5 (313-364)||(18538603-18538654)
chr5 (315-364)||(8545004-8545053)
chr5 (313-374)||(15889406-15889467)
chr5 (313-374)||(17861974-17862035)
chr5 (313-362)||(20175822-20175871)
chr5 (313-374)||(30893928-30893989)
chr5 (313-373)||(1512850-1512910)
chr5 (316-364)||(33654746-33654794)
chr5 (313-364)||(4432111-4432162)
chr5 (313-364)||(6489002-6489053)
chr5 (317-364)||(8639344-8639391)
chr5 (313-364)||(11720889-11720940)
chr5 (313-364)||(18489091-18489142)
chr5 (315-366)||(23118064-23118115)
chr5 (313-364)||(32200462-32200513)
chr5 (316-366)||(7713530-7713580)
chr5 (313-363)||(34436846-34436896)
chr5 (316-374)||(37614432-37614490)
chr5 (310-364)||(39938751-39938804)
chr5 (312-373)||(11017170-11017231)
chr5 (313-366)||(19248474-19248527)
chr5 (312-365)||(20125021-20125073)
chr5 (313-358)||(28447488-28447533)
chr5 (315-348)||(31802257-31802290)
chr5 (313-366)||(36321507-36321560)
chr5 (324-365)||(41630126-41630167)
chr5 (313-365)||(5015276-5015327)
chr5 (313-361)||(5485181-5485229)
chr5 (315-347)||(7671228-7671260)
chr5 (312-364)||(7861016-7861068)
chr5 (313-361)||(8350665-8350713)
chr5 (313-365)||(11637586-11637638)
chr5 (318-374)||(16076431-16076487)
chr5 (312-364)||(16701596-16701648)
chr5 (313-365)||(17708069-17708121)
chr5 (313-365)||(18789031-18789083)
chr5 (313-365)||(29695010-29695062)
chr5 (317-369)||(35610002-35610054)
chr5 (316-364)||(41650954-41651002)
[»] chr2 (52 HSPs)
chr2 (313-366)||(29896307-29896360)
chr2 (316-374)||(40967376-40967434)
chr2 (313-366)||(17779005-17779058)
chr2 (313-374)||(27244652-27244713)
chr2 (313-365)||(3197093-3197145)
chr2 (312-364)||(7537104-7537156)
chr2 (313-364)||(6723092-6723143)
chr2 (313-364)||(7206120-7206171)
chr2 (316-374)||(22608525-22608583)
chr2 (314-364)||(27412851-27412901)
chr2 (313-363)||(44694683-44694733)
chr2 (316-361)||(13490723-13490768)
chr2 (312-373)||(20239337-20239398)
chr2 (313-366)||(22267508-22267561)
chr2 (311-364)||(25186257-25186310)
chr2 (315-364)||(31815902-31815951)
chr2 (318-374)||(4897543-4897599)
chr2 (318-374)||(4944937-4944993)
chr2 (313-364)||(16082127-16082179)
chr2 (313-373)||(24548112-24548172)
chr2 (316-364)||(27935054-27935102)
chr2 (312-364)||(35287679-35287731)
chr2 (317-365)||(37320531-37320579)
chr2 (313-364)||(2256966-2257017)
chr2 (313-364)||(29734686-29734737)
chr2 (313-364)||(33063981-33064032)
chr2 (313-364)||(34977199-34977250)
chr2 (317-364)||(39761437-39761484)
chr2 (315-374)||(43117195-43117254)
chr2 (319-365)||(5168593-5168639)
chr2 (313-363)||(5676734-5676784)
chr2 (312-374)||(9064594-9064656)
chr2 (324-366)||(9547422-9547464)
chr2 (316-362)||(9964489-9964535)
chr2 (318-364)||(16204832-16204878)
chr2 (310-364)||(20565090-20565144)
chr2 (324-374)||(25395447-25395497)
chr2 (312-374)||(38904055-38904117)
chr2 (324-365)||(4640660-4640701)
chr2 (313-366)||(9383222-9383275)
chr2 (313-366)||(9842215-9842268)
chr2 (313-342)||(34388629-34388658)
chr2 (318-363)||(37119274-37119319)
chr2 (313-362)||(45032688-45032737)
chr2 (312-364)||(10332290-10332342)
chr2 (318-374)||(12413493-12413549)
chr2 (318-374)||(12425553-12425609)
chr2 (313-361)||(22571883-22571931)
chr2 (313-365)||(30243245-30243297)
chr2 (314-362)||(34464426-34464474)
chr2 (324-364)||(39256250-39256290)
chr2 (313-373)||(42475116-42475176)
[»] chr3 (40 HSPs)
chr3 (313-364)||(7824802-7824853)
chr3 (317-364)||(12976617-12976664)
chr3 (316-374)||(29791774-29791832)
chr3 (315-366)||(2078237-2078288)
chr3 (313-364)||(7827503-7827554)
chr3 (313-364)||(7829891-7829942)
chr3 (313-364)||(46226092-46226143)
chr3 (313-374)||(8075780-8075841)
chr3 (312-373)||(20370287-20370348)
chr3 (313-362)||(31138412-31138461)
chr3 (312-361)||(37921016-37921065)
chr3 (313-362)||(38387967-38388016)
chr3 (316-365)||(48517669-48517718)
chr3 (316-364)||(13829092-13829140)
chr3 (317-373)||(27397618-27397674)
chr3 (313-365)||(33223863-33223915)
chr3 (316-364)||(42401430-42401478)
chr3 (313-364)||(5186828-5186879)
chr3 (313-364)||(7464506-7464557)
chr3 (313-364)||(7738664-7738715)
chr3 (313-364)||(18870740-18870791)
chr3 (313-363)||(32753823-32753873)
chr3 (323-364)||(1111856-1111897)
chr3 (315-364)||(3755336-3755385)
chr3 (313-366)||(8127458-8127511)
chr3 (317-362)||(10922325-10922370)
chr3 (313-374)||(16980359-16980420)
chr3 (313-374)||(29687077-29687138)
chr3 (317-362)||(35126286-35126331)
chr3 (313-366)||(48234466-48234519)
chr3 (312-365)||(49097266-49097319)
chr3 (313-374)||(53162193-53162254)
chr3 (313-373)||(1149075-1149135)
chr3 (313-361)||(1757687-1757735)
chr3 (321-365)||(2662095-2662139)
chr3 (312-364)||(5428451-5428503)
chr3 (317-373)||(5702184-5702239)
chr3 (313-365)||(17507713-17507765)
chr3 (313-365)||(21331431-21331483)
chr3 (313-364)||(46088814-46088866)
[»] chr4 (66 HSPs)
chr4 (324-374)||(41520960-41521010)
chr4 (324-373)||(38934884-38934933)
chr4 (323-363)||(24540848-24540888)
chr4 (313-373)||(51002282-51002342)
chr4 (313-364)||(20096285-20096336)
chr4 (315-374)||(22448590-22448649)
chr4 (316-374)||(7248334-7248392)
chr4 (324-362)||(24063225-24063263)
chr4 (312-374)||(39842017-39842079)
chr4 (312-362)||(45970724-45970774)
chr4 (317-374)||(3299099-3299156)
chr4 (312-357)||(6460100-6460145)
chr4 (313-362)||(12712035-12712084)
chr4 (319-364)||(17423192-17423237)
chr4 (313-374)||(21318258-21318319)
chr4 (313-374)||(22630365-22630426)
chr4 (313-374)||(43034347-43034408)
chr4 (316-361)||(44918231-44918276)
chr4 (321-358)||(49233816-49233853)
chr4 (317-373)||(19124628-19124684)
chr4 (296-364)||(20799409-20799477)
chr4 (316-364)||(21317353-21317401)
chr4 (312-364)||(35378202-35378254)
chr4 (328-372)||(43183000-43183044)
chr4 (318-374)||(52936641-52936697)
chr4 (313-364)||(7030908-7030959)
chr4 (313-364)||(13276124-13276175)
chr4 (313-364)||(21935007-21935058)
chr4 (315-366)||(30380527-30380578)
chr4 (311-342)||(34019490-34019521)
chr4 (313-364)||(36203231-36203282)
chr4 (313-364)||(36662384-36662435)
chr4 (318-361)||(40847085-40847128)
chr4 (313-364)||(43722760-43722811)
chr4 (319-374)||(48171882-48171937)
chr4 (313-364)||(50362154-50362205)
chr4 (317-360)||(50376674-50376717)
chr4 (315-365)||(5520130-5520179)
chr4 (324-374)||(35823382-35823432)
chr4 (318-364)||(56204947-56204993)
chr4 (315-364)||(2434473-2434522)
chr4 (315-364)||(6459939-6459988)
chr4 (324-373)||(6520077-6520126)
chr4 (313-362)||(12671765-12671814)
chr4 (311-364)||(16304113-16304166)
chr4 (313-362)||(16733536-16733585)
chr4 (313-366)||(21465606-21465659)
chr4 (320-365)||(22040652-22040697)
chr4 (312-357)||(23626375-23626420)
chr4 (315-364)||(27550749-27550798)
chr4 (313-374)||(39171375-39171436)
chr4 (316-365)||(41536920-41536969)
chr4 (316-361)||(45289275-45289320)
chr4 (316-365)||(47490721-47490770)
chr4 (315-364)||(54500566-54500615)
chr4 (313-354)||(55962603-55962644)
chr4 (328-364)||(11144680-11144716)
chr4 (313-357)||(14136086-14136130)
chr4 (313-361)||(14577525-14577573)
chr4 (313-365)||(28435262-28435314)
chr4 (316-364)||(29908054-29908102)
chr4 (313-364)||(41144406-41144458)
chr4 (313-365)||(43374286-43374338)
chr4 (315-363)||(48067130-48067178)
chr4 (313-361)||(48955287-48955335)
chr4 (313-365)||(51436620-51436672)
[»] chr1 (56 HSPs)
chr1 (317-366)||(11241998-11242047)
chr1 (315-367)||(1864231-1864283)
chr1 (315-363)||(34877668-34877716)
chr1 (313-364)||(16033465-16033516)
chr1 (313-364)||(36672729-36672780)
chr1 (315-374)||(41974758-41974817)
chr1 (313-363)||(44641522-44641572)
chr1 (313-362)||(11014227-11014276)
chr1 (313-358)||(15729425-15729470)
chr1 (317-366)||(19396204-19396253)
chr1 (313-374)||(30678818-30678879)
chr1 (327-364)||(41142701-41142738)
chr1 (313-358)||(41573290-41573335)
chr1 (313-365)||(1091174-1091226)
chr1 (316-364)||(2889941-2889989)
chr1 (312-364)||(5280625-5280677)
chr1 (312-364)||(44220981-44221033)
chr1 (313-364)||(3528484-3528535)
chr1 (315-358)||(8153132-8153175)
chr1 (313-364)||(21400038-21400089)
chr1 (313-364)||(29233989-29234040)
chr1 (317-364)||(31401668-31401715)
chr1 (313-364)||(36371055-36371106)
chr1 (313-364)||(48131243-48131294)
chr1 (313-364)||(52441526-52441577)
chr1 (316-358)||(9116893-9116935)
chr1 (317-363)||(10292935-10292981)
chr1 (316-374)||(24978242-24978300)
chr1 (316-362)||(40618908-40618954)
chr1 (311-361)||(40922735-40922785)
chr1 (318-364)||(47961304-47961350)
chr1 (318-364)||(49868011-49868057)
chr1 (314-364)||(49875614-49875664)
chr1 (331-365)||(51241503-51241537)
chr1 (320-365)||(1824662-1824707)
chr1 (313-374)||(3693801-3693862)
chr1 (313-358)||(7925359-7925404)
chr1 (313-374)||(8266191-8266252)
chr1 (313-358)||(14905437-14905482)
chr1 (316-361)||(28006740-28006785)
chr1 (313-374)||(36467030-36467091)
chr1 (313-374)||(40818602-40818663)
chr1 (321-366)||(41063093-41063138)
chr1 (313-358)||(43840346-43840391)
chr1 (313-361)||(3431325-3431373)
chr1 (313-361)||(5279388-5279436)
chr1 (316-364)||(7574133-7574181)
chr1 (329-365)||(13401608-13401644)
chr1 (313-365)||(17669640-17669692)
chr1 (317-365)||(24124844-24124892)
chr1 (313-365)||(26010217-26010269)
chr1 (313-365)||(27533238-27533290)
chr1 (313-361)||(29935978-29936026)
chr1 (318-374)||(34848476-34848532)
chr1 (321-357)||(39916957-39916993)
chr1 (313-357)||(41998346-41998390)
[»] scaffold0016 (1 HSPs)
scaffold0016 (313-364)||(99032-99083)
[»] scaffold0143 (1 HSPs)
scaffold0143 (315-364)||(4463-4512)
[»] scaffold0122 (1 HSPs)
scaffold0122 (315-364)||(14201-14250)
[»] scaffold0088 (1 HSPs)
scaffold0088 (315-364)||(48018-48067)
[»] scaffold0045 (2 HSPs)
scaffold0045 (313-374)||(63857-63918)
scaffold0045 (313-374)||(71189-71250)
[»] scaffold1160 (1 HSPs)
scaffold1160 (321-365)||(1726-1770)
[»] scaffold0238 (1 HSPs)
scaffold0238 (312-364)||(25383-25435)
[»] scaffold0043 (1 HSPs)
scaffold0043 (313-365)||(90471-90523)
[»] scaffold0038 (1 HSPs)
scaffold0038 (328-364)||(31937-31973)
[»] scaffold0008 (1 HSPs)
scaffold0008 (313-361)||(119564-119612)
[»] scaffold0005 (1 HSPs)
scaffold0005 (313-361)||(239802-239850)


Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 283
Target Start/End: Complemental strand, 22564508 - 22564231
Alignment:
Q  5 caatcttttccccccacatcaacatgtacttaggtnnnnnnngagtcctacacgttaaagggta---aatgcccttttcattgatatgaaannnnnnnag 101  Q
    ||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||   ||||||||||||||||||||||||       ||    
T  22564508 caatctttttcccccacatcaacatgtacttaggtaaaaaaagagtcctacacgttaaagggtagtaaatgcccttttcattgatatgaaatatttttag 22564409  T
Q  102 agatttgattttgaccaagtgttattttggtgtatttaagctagaaaatttgtggacaaaagttgagatcgatgatgcaacattattattttgtggttta 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22564408 agatttgattttgaccaagtgttattttggtgtatttaagctagaaaatttgtggacaaaagttgagatcgatgatgcaacattattattttgtggttta 22564309  T
Q  202 cattttacaatgatagatagatagatgatgcaacattattaacaagaatatgtttttccttgctttattgcatttgatattg 283  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22564308 cattttacaatgatagat----agatgatgcaacattattaacaagaatatgtttttccttgctttattgcatttgatattg 22564231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 3948051 - 3948098
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  3948051 ctcgtgagtttaactcagttgatagagacaatgcataatatatgcaag 3948098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 44106617 - 44106671
Alignment:
Q  307 aattaatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  44106617 aattaatcctcctgagtttaactcagttgatagagacaatacataatatatgcaa 44106671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 15913545 - 15913599
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    ||||| ||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  15913545 atcctagtgagattaactcagttgctagagacaatgcataatatatgcaaggttt 15913599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 22267576 - 22267621
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  22267576 tcctcgtgagtttaactcagttggtagagacaatgcataatatatg 22267621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 25246767 - 25246815
Alignment:
Q  314 cctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  25246767 cctcgtgagtttagctcagttgataaagacaatgcataatatatgcaag 25246815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 45425456 - 45425500
Alignment:
Q  321 agtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||    
T  45425456 agtttaactcagttgataaagacaatgcataatatatgcaaggtt 45425500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 44941468 - 44941413
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttcatatca 379  Q
    |||||||||||| ||| || ||||| ||||||||||||||||||||||||| ||||    
T  44941468 ttaactcagttggtagggataatgcataatatatgcaaggtttaaggttcaaatca 44941413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 1285132 - 1285086
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||    
T  1285132 tcgtgagtttaactcagttgataggaacaatgcataatatatgcaag 1285086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 8879811 - 8879761
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||||||||    
T  8879811 ctcgtgagcttaactcagttggtatagacaatgcataatatatgcaaggtt 8879761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 34807213 - 34807267
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagag-acaatgcgtaatatatgcaaggttt 366  Q
    |||||||||||||| ||||||||||| || ||||||| |||||||||||||||||    
T  34807213 tcctcgtgagtttagctcagttgataaagaacaatgcataatatatgcaaggttt 34807267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 43681053 - 43680995
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||||||||||| | |||||||| ||| ||||||||||| || ||||||    
T  43681053 tcgtgagtttaactcagttgattgggacaatgcataaaatatgcaaggtctagggttca 43680995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 38911298 - 38911347
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||| ||||||||||||||| ||||||||  |||||||||||||||||    
T  38911298 cgtgagcttaactcagttgataaagacaatgtataatatatgcaaggttt 38911347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 42829300 - 42829251
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||| || ||||||||||||| |||||||| |||||||||||||    
T  42829300 tcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaag 42829251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 27908775 - 27908735
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  27908775 ttaactcagttgatagaaacaatgcttaatatatgcaaggt 27908735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 29734856 - 29734808
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  29734856 tcctcgtgagtttagctcagtcgatagaaacaatgcataatatatgcaa 29734808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 32062018 - 32062066
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||| |||||||||||| |||||||||||  ||||||||||||    
T  32062018 tcctcgtgagattaactcagttggtagagacaatgtataatatatgcaa 32062066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 35142215 - 35142155
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||| ||| |||||||||||  |||||||| |||||||||||| |||| ||||||    
T  35142215 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaagtttgaggttc 35142155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 44454507 - 44454559
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||||||| ||| |||||||| ||| ||||||||||||    
T  44454507 tcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaaggtt 44454559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 1399157 - 1399208
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||| ||  |||||||| | |||||||||||||    
T  1399157 tcctcgtgagtttaactcagttggtatggacaatgcatgatatatgcaaggt 1399208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 19599140 - 19599191
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| |||||||||||||||||| ||  |||||||| |||||||||||||||    
T  19599140 tcctggtgagtttaactcagttggtatggacaatgcataatatatgcaaggt 19599191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 366
Target Start/End: Complemental strand, 19684268 - 19684225
Alignment:
Q  323 tttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||    
T  19684268 tttaactcagttgatatagacaatgcataatatatgtaaggttt 19684225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 20085824 - 20085774
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||| | || ||||||||| |||||||||||||||    
T  20085824 tcctcgtgagtttaactcagtcggta-agacaatgcataatatatgcaaggt 20085774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 23221392 - 23221439
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||| |||||||||||| |||||||||||| ||||||||| ||||||    
T  23221392 gtgagcttaactcagttggtagagacaatgcataatatatgtaaggtt 23221439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 360
Target Start/End: Complemental strand, 29461883 - 29461840
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgca 360  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||    
T  29461883 cgtgagtttaactcagttggtagggacaatgcataatatatgca 29461840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 35222919 - 35222970
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||  ||||||||||| |||||||| | |||||||||||||    
T  35222919 tcctcgtgagtttaggtcagttgatagggacaatgcatgatatatgcaaggt 35222970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 9819616 - 9819566
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||||||||||| |||||||| |||  ||||||| |||||||||||||    
T  9819616 atcctcgtgagtttatctcagttggtaggaacaatgcataatatatgcaag 9819566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 10721541 - 10721491
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||||||||||| |||||||| |||  ||||||| |||||||||||||    
T  10721541 atcctcgtgagtttatctcagttggtaggaacaatgcataatatatgcaag 10721491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 22564205 - 22564147
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||||||||| |||  | ||| |||||||||||||| ||| ||||||||    
T  22564205 tcgtgagtttaactcagttggtaggaataatacgtaatatatgcaaagttcaaggttca 22564147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 30622970 - 30623028
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||||| ||||| | |||||| | ||||||||||||||| || ||||||    
T  30622970 tcgtgagtttaactcaattgattgggacaatacataatatatgcaaggtctatggttca 30623028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 42435461 - 42435403
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||| ||| |||||||| ||||||| |||| ||||||||||||||| ||| |||||    
T  42435461 tcgtgagcttagctcagttggtagagactatgcataatatatgcaaggtctaatgttca 42435403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 44558839 - 44558789
Alignment:
Q  314 cctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||| |||||||| ||  |||||||| |||||||||||||||    
T  44558839 cctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggt 44558789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 1311853 - 1311808
Alignment:
Q  328 ctcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||||  |||||||| ||| ||||||||||||||||||||    
T  1311853 ctcagttgatatggacaatgcataaaatatgcaaggtttaaggttc 1311808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 5317351 - 5317302
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||| |||||||||||||||  || ||||| ||||||||||||||||    
T  5317351 tcgtgagcttaactcagttgatatggaaaatgcataatatatgcaaggtt 5317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 8683065 - 8683114
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||| ||| |||||||| || ||||||||| |||||||||||||    
T  8683065 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 8683114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 30463434 - 30463385
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||| |||||||||||  || ||||||||| ||||||||||||||||    
T  30463434 tcgtgaggttaactcagttagtatagacaatgcataatatatgcaaggtt 30463385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 30857243 - 30857296
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||||||| || ||||| ||  |||||||| |||||||||||||||||    
T  30857243 tcctcgtgagtttagcttagttggtatggacaatgcataatatatgcaaggttt 30857296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 4047781 - 4047832
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| ||| |||||||||||| || ||||| ||||||||||||||||    
T  4047781 tcctcgtgagcttagctcagttgatag-gataatgcataatatatgcaaggtt 4047832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 7388105 - 7388053
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||||||| | | |||||||| ||||||||| ||||||    
T  7388105 tcctcgtgagcttaactcagttggttgggacaatgcataatatatgtaaggtt 7388053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 16355508 - 16355560
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||||||| |||||||| ||  ||||||||| ||||||    
T  16355508 tcctcgtgagcttaactcagttggtagagacattgtataatatatgtaaggtt 16355560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 33781536 - 33781496
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||| |||||||| |||| ||||||||||    
T  33781536 ttaactcagttgatagggacaatgcataatttatgcaaggt 33781496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 35165532 - 35165588
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    ||||||||||||||||||||||  |||||| | ||||||||| ||||| | ||||||    
T  35165532 cgtgagtttaactcagttgataacgacaatacataatatatgtaaggtctgaggttc 35165588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 36032927 - 36032979
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||||||| |||| |||  ||||||  ||||||||||||||||    
T  36032927 tcctcgtgagtttaactcggttggtagtaacaatgtataatatatgcaaggtt 36032979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 36755010 - 36755061
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||||||| ||| |||||||| ||||||||| ||||||    
T  36755010 tcctcgtgagcttaactcagttggtag-gacaatgcataatatatgtaaggtt 36755061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 36760807 - 36760858
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||||||| ||| |||||||| ||||||||| ||||||    
T  36760807 tcctcgtgagcttaactcagttggtag-gacaatgcataatatatgtaaggtt 36760858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 36803833 - 36803877
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatat 357  Q
    |||||||||| ||| |||||||| |||||||||||| ||||||||    
T  36803833 tcctcgtgagcttagctcagttggtagagacaatgcataatatat 36803877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 46551913 - 46551869
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatata 356  Q
    |||| ||||||||||||||||||||||  |||||||| |||||||    
T  46551913 atccccgtgagtttaactcagttgataaggacaatgcataatata 46551869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 48103740 - 48103688
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||||||| | | |||||||| ||| ||||||||||||    
T  48103740 tcctcgtgagcttaactcagttggttgggacaatgcataaaatatgcaaggtt 48103688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 49172352 - 49172301
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| ||| |||||||||||| |||||||| ||||||||| |||||    
T  49172352 atcctcgtgagcttagctcagttgatagggacaatgc-taatatatgtaaggt 49172301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 7553674 - 7553735
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||  ||||||||    
T  7553674 tcctcgtgagtttaactcagttggtagggacaatgcataatatatgcaaggtccaaggttca 7553735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 28084276 - 28084329
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  28084276 atcctcgtgagcttaactcagttgatagagacaatgaataatatatgcaaggtt 28084329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 1877726 - 1877677
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  1877726 ctcgtgagcttaactcagttgatatagacaatgcataatatatgcaaggt 1877677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 3672682 - 3672621
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||| |||||||||||||||||| | |||||||||| ||| |||||||||||||| ||||||    
T  3672682 tccttgtgagtttaactcagttggttgagacaatgcataaaatatgcaaggtttagggttca 3672621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 6447184 - 6447235
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||||||||    
T  6447184 tcctcgtgagtttaactcagttggtatggacaatgcataatatatgcaaggt 6447235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 17062405 - 17062354
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||||||||||||||| ||||||| | |||||||||||||||    
T  17062405 tcctcgtgagcttaactcagttgatatagacaatacataatatatgcaaggt 17062354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 17585953 - 17586004
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||||||||||||||| ||||||| | |||||||||||||||    
T  17585953 tcctcgtgagcttaactcagttgatatagacaatacataatatatgcaaggt 17586004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 29376896 - 29376947
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||| ||  ||||||||||||||||||||||||    
T  29376896 tcctcgtgagcttaactcagttggtatggacaatgcgtaatatatgcaaggt 29376947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 37015902 - 37015851
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| |||||||||||| |||||||||||||||    
T  37015902 tcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggt 37015851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 42700502 - 42700561
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||| ||||||| |||| |||||||||||| ||||||||||||||| | |||||||    
T  42700502 ctcgtgagcttaactcggttggtagagacaatgcataatatatgcaaggtatgaggttca 42700561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 15079214 - 15079164
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttta 367  Q
    |||||| |||||||||||| ||| |||||||| ||||||||||||||||||    
T  15079214 cgtgagcttaactcagttggtagggacaatgcataatatatgcaaggttta 15079164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 1230727 - 1230666
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||| |||||||||||||||| |||  ||||||| ||||||||| ||||||| |||||||    
T  1230727 tcctcgcgagtttaactcagttggtaggaacaatgcataatatatgtaaggtttgaggttca 1230666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 7404768 - 7404817
Alignment:
Q  309 ttaatcctcgtgagtttaactcagttgatagagac-aatgcgtaatatat 357  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  7404768 ttaatcctcgtgagtttaactcagttggtagagacaaatgcataatatat 7404817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 8717542 - 8717489
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||||||| |||||||| ||  |||||||| ||||||||||||||||    
T  8717542 atcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggtt 8717489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 12714437 - 12714384
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||||||| ||||||||  || |||||||| ||||||||||||||||    
T  12714437 atcctcgtgagtttagctcagttggaagggacaatgcataatatatgcaaggtt 12714384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 5325573 - 5325525
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||||||| |||||||||| |||||||||| ||| ||||||||    
T  5325573 tcctcgtgagtttagctcagttgattgagacaatgcataaaatatgcaa 5325525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 14279633 - 14279585
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||||||||    
T  14279633 cgtgagtttaactcagttggtatagacaatgcataaaatatgcaaggtt 14279585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 22948148 - 22948096
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||  | |||||||||| |||||||| |||||||||||||||    
T  22948148 atcctcgtgagtttggcccagttgatagggacaatgcataatatatgcaaggt 22948096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 32223945 - 32223897
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||| |||  |||||||||||||||||||| ||||||||||||    
T  32223945 tcctcgtgagcttagttcagttgatagagacaatgcataatatatgcaa 32223897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 11708981 - 11709032
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| ||| |||||||| |||||||||||||||    
T  11708981 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 11709032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 11771702 - 11771753
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||| || ||| ||||||||||||||||||| | |||||||||||||||    
T  11771702 tcctcgtaagcttagctcagttgatagagacaatacataatatatgcaaggt 11771753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 13357507 - 13357456
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||| ||  |||||||| |||||||||||||||    
T  13357507 tcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 13357456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 27718960 - 27718909
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||||||  |||||||| |||||||||||||||    
T  27718960 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggt 27718909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 33987752 - 33987803
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| |||||||||||||||||| |||||||| ||  |||||||||||||||    
T  33987752 tccttgtgagtttaactcagttggtagagacagtgtataatatatgcaaggt 33987803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 39821879 - 39821930
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| ||| |||||||| |||||||||||||||    
T  39821879 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 39821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 26991824 - 26991770
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||| |||||||  |||||||||||  |||||||| |||||||||||||||||    
T  26991824 atcctcatgagtttggctcagttgatatggacaatgcataatatatgcaaggttt 26991770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 29186500 - 29186558
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||| | |||||||||| ||  |||||||||||||||||||||||| | |||||||    
T  29186500 tcgtgagctcaactcagttggtaaggacaatgcgtaatatatgcaaggtatgaggttca 29186558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 6833889 - 6833825
Alignment:
Q  309 ttaatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||| |||||||| ||| ||| |||||| | |||||||||||||||  ||||||||    
T  6833889 ttaatcctcgtgagattaactcaattggtagggacaat-cataatatatgcaaggtccaaggttca 6833825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 10152450 - 10152511
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    ||||||||||| ||| |||||||| || ||||||||  ||| ||||||||||||| ||||||    
T  10152450 atcctcgtgagcttagctcagttggtatagacaatgtataaaatatgcaaggtttgaggttc 10152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 13105094 - 13105139
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    ||||| |||||||||||| ||| |||||||| ||||||||||||||    
T  13105094 gtgagattaactcagttggtagggacaatgcataatatatgcaagg 13105139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 13286126 - 13286175
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||| ||| |||||||| || ||||||||| |||||||||||||    
T  13286126 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 13286175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 13575284 - 13575333
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||||||| |||||||| ||| |||||||| ||| |||||||||    
T  13575284 tcctcgtgagtttagctcagttggtagggacaatgcataacatatgcaag 13575333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 17694481 - 17694436
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    ||||||||||||||||||||||| || ||||||||| |||| ||||    
T  17694481 tcctcgtgagtttaactcagttgttaaagacaatgcataatgtatg 17694436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 19701408 - 19701359
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||||  || ||||| ||||||||| |||||    
T  19701408 ctcgtgagtttaactcagttgataaggataatgcataatatatgtaaggt 19701359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 33482213 - 33482164
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||| || ||||||||| |||||||| |||| ||||||||||    
T  33482213 ctcgtgagtttagcttagttgatagggacaatgcataatttatgcaaggt 33482164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 42200728 - 42200667
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| |||||||||||| |||||||  ||||||||||| ||| | |||||||    
T  42200728 tcctcgtgagcttagctcagttgatagggacaatgtataatatatgcatggtctgaggttca 42200667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 43778022 - 43778075
Alignment:
Q  321 agtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||||||| || ||||||||| ||| ||||||||||| | |||||||    
T  43778022 agtttaactcagttggtatagacaatgcataaaatatgcaaggtctgaggttca 43778075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 6471506 - 6471554
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||||||||||||||||||  |||||  ||||||| ||||||||||||    
T  6471506 tcctcgtgagtttaactcagccgataggaacaatgcataatatatgcaa 6471554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 12910872 - 12910812
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||| ||||| ||| |||||||| ||  |||||||| ||||||||||||||| ||||||||    
T  12910872 tccttgtgagattagctcagttggtatggacaatgcataatatatgcaaggtctaaggttc 12910812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 15310317 - 15310369
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgt-aatatatgcaaggt 364  Q
    |||||||||| ||| ||||||||||| ||||||||| | ||||||||||||||    
T  15310317 tcctcgtgagcttagctcagttgatatagacaatgcataaatatatgcaaggt 15310369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 15490686 - 15490738
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgt-aatatatgcaaggt 364  Q
    |||||||||| ||| ||||||||||| ||||||||| | ||||||||||||||    
T  15490686 tcctcgtgagcttagctcagttgatatagacaatgcataaatatatgcaaggt 15490738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 17002405 - 17002345
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    ||||| |||| ||| ||||||||||| ||||||||| ||| ||||||||| |||| |||||    
T  17002405 tcctcctgagattagctcagttgatatagacaatgcataaaatatgcaagatttatggttc 17002345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 17704007 - 17704059
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| ||| |||||||| ||  |||||||| |||||||||||||||    
T  17704007 atcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 17704059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 28439957 - 28440005
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||| |||||||||| ||| ||||| ||||||||| |||||    
T  28439957 tcgtgagtttaattcagttgataaagataatgcataatatatgtaaggt 28440005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 29652212 - 29652264
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||| |||||||| |||||||||||   ||||||| |||||||||||||||    
T  29652212 atcctcatgagtttagctcagttgataagaacaatgcataatatatgcaaggt 29652264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 31511968 - 31512016
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||||| ||||    
T  31511968 ctcgtgagtctaactcagttggtagggacaatgcataatatatgtaagg 31512016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 32555249 - 32555309
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||||||| || ||||| ||  |||||||| ||| |||||||||||| |||||||    
T  32555249 tcctcgtgagtttagcttagttggtatggacaatgcataaaatatgcaaggttcaaggttc 32555309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 34997453 - 34997505
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgt-aatatatgcaaggt 364  Q
    |||||||||| ||| ||||||||||| ||||||||| | ||||||||||||||    
T  34997453 tcctcgtgagcttagctcagttgatatagacaatgcataaatatatgcaaggt 34997505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 37999486 - 37999426
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||| |||||||||||| ||  || ||||| ||||||||||||||| || |||||    
T  37999486 tcctcgtgagcttaactcagttggtatggataatgcataatatatgcaaggtatagggttc 37999426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 331952 - 331899
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  331952 tcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaaggttt 331899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 24373776 - 24373725
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  24373776 tcctcgtgagtttaactcaattggtagagacaatgcataatatatgcaaggt 24373725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 1918522 - 1918473
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  1918522 ctcgtgagtttaactcagttggtatagacaatgcataatatatgcaaggt 1918473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 7081720 - 7081661
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggtt 372  Q
    |||||||||| ||| ||||||||||| ||||||| | ||||||||||||||| |||||||    
T  7081720 tcctcgtgagcttagctcagttgataaagacaatacataatatatgcaaggtctaaggtt 7081661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 12412272 - 12412323
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||| ||||| |||||||||||| |||||||||||||||    
T  12412272 tcctcgtgagcttaacttagttggtagagacaatgcataatatatgcaaggt 12412323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 14552333 - 14552384
Alignment:
Q  314 cctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||| |||||||    
T  14552333 cctcgtgagcttaactcagttgatagagataatgcataatatatacaaggtt 14552384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 12077 - 12028
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||| |||||||||| ||||||||||||||| ||||| ||||||||||||    
T  12077 atccccgtgagtttagctcagttgatagagataatgcataatatatgcaa 12028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 21941519 - 21941474
Alignment:
Q  319 tgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||    
T  21941519 tgagcttaactcagttgatagggacaatgcgtaatatatgtaaggt 21941474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 4450261 - 4450308
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||| ||| ||||||||||| ||||||||| |||||||||||||||    
T  4450261 cgtgagcttagctcagttgataaagacaatgcataatatatgcaaggt 4450308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 13496111 - 13496162
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||||||   ||||||| |||||||||||||||    
T  13496111 tcctcgtgagcttaactcagttgatatgaacaatgcataatatatgcaaggt 13496162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 18256878 - 18256929
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||||||  |||||||| |||||||||||||||    
T  18256878 tcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaaggt 18256929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 28046228 - 28046185
Alignment:
Q  329 tcagttgatagagacaatgcgtaatatatgcaaggtttaaggtt 372  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||    
T  28046228 tcagttgataaagacaatgcataatatatgcaaggtttgaggtt 28046185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 29283812 - 29283871
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||| || |||||||||||| |||||||||||  ||||||||||||||| || ||||||    
T  29283812 ctcgtaagcttaactcagttggtagagacaatgtataatatatgcaaggtctagggttca 29283871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 372
Target Start/End: Complemental strand, 2617266 - 2617212
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggtt 372  Q
    ||||| |||||| ||||| |||||||||||| ||||||||| ||||||| |||||    
T  2617266 gtgagcttaacttagttggtagagacaatgcataatatatgtaaggtttgaggtt 2617212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 3373444 - 3373398
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||| ||||||||||||||||  |||||||| |||||||||||||    
T  3373444 tcgtgaatttaactcagttgatatggacaatgcataatatatgcaag 3373398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 14049935 - 14049889
Alignment:
Q  328 ctcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| |||||||||| ||||||||||||||| | |||||||    
T  14049935 ctcagttgattgagacaatgcataatatatgcaaggtctgaggttca 14049889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 15046985 - 15046935
Alignment:
Q  310 taatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgca 360  Q
    ||||||||||||||||| || | |||||| ||||||||| |||||||||||    
T  15046985 taatcctcgtgagtttagcttaattgatatagacaatgcataatatatgca 15046935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 866351 - 866290
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||| |||||||| |||  || |||| |||||||||||||||| | ||||||    
T  866351 tcctcgtgagtttagctcagttggtaggcacgatgcataatatatgcaaggttcatggttca 866290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 1989108 - 1989048
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| |||||||||||| ||  |||||||| ||||||||| ||||||| |||||||    
T  1989108 tcctcgtgagcttaactcagttggta-tgacaatgcataatatatgtaaggtttgaggttca 1989048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 6470678 - 6470637
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    |||||| ||||||||||||||| ||||||||| |||||||||    
T  6470678 cgtgagcttaactcagttgataaagacaatgcataatatatg 6470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 7281464 - 7281419
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    |||||||||||||||||| |||| |||||||||||  |||||||||    
T  7281464 tcctcgtgagtttaactcggttggtagagacaatgtataatatatg 7281419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 12735309 - 12735256
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||| |||||||||||| | | |||||||| ||| |||||||||||||    
T  12735309 tcctcgtgagcttaactcagttggttgggacaatgcataaaatatgcaaggttt 12735256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 27928175 - 27928142
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaat 346  Q
    ||||||||||||||||||||||| ||||||||||    
T  27928175 tcctcgtgagtttaactcagttggtagagacaat 27928142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 28951393 - 28951446
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||| |||||||||||| ||   ||||||| ||||||||||||||||    
T  28951393 atcctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtt 28951446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 334150 - 334186
Alignment:
Q  328 ctcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  334150 ctcagttgataaagacaatgcataatatatgcaaggt 334186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 788861 - 788913
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| ||| |||||||| ||  |||||||| ||||||||||||||||    
T  788861 tcctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaaggtt 788913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 10780171 - 10780123
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||| ||| |||||||| ||| |||||||| ||||||||||||||    
T  10780171 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaagg 10780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 12336392 - 12336348
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatat 357  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||    
T  12336392 tcctcgtgagtttaactcagttaatatggacaatgcataatatat 12336348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 15291756 - 15291696
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||| |||||| ||||| ||  |||||||  ||||||||||||||||| ||||||    
T  15291756 tcctcgtgagcttaacttagttggtaaggacaatgaataatatatgcaaggtttgaggttc 15291696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 28231476 - 28231440
Alignment:
Q  328 ctcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||| |||||||| |||||||||||||||    
T  28231476 ctcagttgatagggacaatgcataatatatgcaaggt 28231440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 31140878 - 31140826
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| ||||||||| ||||| ||| ||||  ||||||||||||||||    
T  31140878 tcctcgtgagcttaactcagctgataaagataatgtataatatatgcaaggtt 31140826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 32053783 - 32053835
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| ||| |||||||| ||  |||||||| ||||||||||||||||    
T  32053783 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtt 32053835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 32524490 - 32524438
Alignment:
Q  309 ttaatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||| |||||||| |||||||| ||| ||| |||||||| ||||||||||||    
T  32524490 ttaattctcgtgagcttaactcaattggtagggacaatgcataatatatgcaa 32524438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 40445978 - 40446039
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||| | |||||||    
T  40445978 tcctcgtgagtttaactcagttgataaggacaatgcataatatatgcaaggtctgaggttca 40446039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 34206226 - 34206274
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  34206226 cgtgagtttaactcagttggtaaagacaatgcataatatatgcaaggtt 34206274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 18538603 - 18538654
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||| || ||||| |||||||||||| |||||||||||||||    
T  18538603 tcctcgtgagtttagctaagttggtagagacaatgcataatatatgcaaggt 18538654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 8545053 - 8545004
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||| |||||||||||||||  |||||||| |||||||||||||||    
T  8545053 ctcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggt 8545004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 15889406 - 15889467
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| |||||||| ||| |||||||| ||||||||||||||| || ||||||    
T  15889406 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctagggttca 15889467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 17861974 - 17862035
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||| |||||||| ||| |||||||| |||||||||||| ||| | ||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaaagttcagggttca 17862035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 20175822 - 20175871
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||| |||||||||||| |||||||||||| ||| |||||||||    
T  20175822 tcctcgtgagcttaactcagttgttagagacaatgcataaaatatgcaag 20175871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 30893928 - 30893989
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| |||||||||||  || ||||||||| ||||||||||||||| | |||||||    
T  30893928 tcctcgtgagcttaactcagtttgtaaagacaatgcataatatatgcaaggtatgaggttca 30893989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 1512850 - 1512910
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||| |||||||||||  ||| |||||||| ||||||||| ||||| ||||||||    
T  1512850 tcctcgtgagcttaactcagttagtagggacaatgcataatatatgtaaggtctaaggttc 1512910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 33654746 - 33654794
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  33654746 tcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt 33654794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 4432111 - 4432162
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||| ||||||||||||||||||  |||||||| ||||||||| |||||    
T  4432111 tcctcgtaagtttaactcagttgataaggacaatgcataatatatgtaaggt 4432162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 6489002 - 6489053
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| ||| |||||||| |||||||||||||||    
T  6489002 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 6489053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 8639391 - 8639344
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||| |||||||||||||||  ||||||| ||||||||||||||||    
T  8639391 cgtgagcttaactcagttgataaggacaatgtgtaatatatgcaaggt 8639344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 11720889 - 11720940
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| ||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  11720889 tccttgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt 11720940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 18489142 - 18489091
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| ||||||||| |||||||| || ||||||||| |||||||||||||||    
T  18489142 tccttgtgagtttagctcagttggtatagacaatgcataatatatgcaaggt 18489091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 23118115 - 23118064
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||| |||||||||||||||  |||||||| ||||||||| |||||||    
T  23118115 ctcgtgagcttaactcagttgataaggacaatgcataatatatgtaaggttt 23118064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 32200513 - 32200462
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| ||||||||| || |||||||| |||||||||||||||    
T  32200513 tcctcgtgagcttagctcagttgacagggacaatgcataatatatgcaaggt 32200462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 7713530 - 7713580
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||||||||||||||||   | ||||| |||||||||||||||||    
T  7713530 tcgtgagtttaactcagttgatatgaataatgcataatatatgcaaggttt 7713580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 34436846 - 34436896
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||||| ||| |||||||| ||| |||||||| ||||||||||||||    
T  34436846 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaagg 34436896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 37614490 - 37614432
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||| ||| |||||||| ||||||||| || ||||||||||||||||  |||||||    
T  37614490 tcgtgagcttagctcagttggtagagacaacgcataatatatgcaaggttcgaggttca 37614432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 39938751 - 39938804
Alignment:
Q  310 taatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||| ||||||||||||||||| |||||| |||||| | |||||||||||||||    
T  39938751 taatcttcgtgagtttaactcagctgatag-gacaatacataatatatgcaaggt 39938804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 11017170 - 11017231
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||| |||||||||| |||||||| ||| || ||||| ||||||||||||||| | ||||||    
T  11017170 atccgcgtgagtttagctcagttggtagggataatgcataatatatgcaaggtctgaggttc 11017231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 19248474 - 19248527
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||| ||| |||||||| || ||||||||| |||||||||||| ||||    
T  19248474 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaatgttt 19248527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 20125021 - 20125073
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||| || |||||||| ||||||| |||||||| ||||||||||||||||    
T  20125021 atcctcgtaagcttaactcaattgatag-gacaatgcataatatatgcaaggtt 20125073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 28447488 - 28447533
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    ||||||||||||||||||||||  ||| |||||||| |||||||||    
T  28447488 tcctcgtgagtttaactcagttagtagggacaatgcataatatatg 28447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 31802290 - 31802257
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgc 348  Q
    ||||||||||||||||||||||||||||| ||||    
T  31802290 ctcgtgagtttaactcagttgatagagacgatgc 31802257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 36321560 - 36321507
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||| ||| |||||||| ||  |||||||| |||||||||||||||||    
T  36321560 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttt 36321507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 41630167 - 41630126
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  41630167 ttaactcaattgatagggacaatgcataatatatgcaaggtt 41630126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 5015276 - 5015327
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||| |||||||| ||| |||||||  ||||||||||||||||    
T  5015276 tcctcgtgagtttagctcagttggtag-gacaatgaataatatatgcaaggtt 5015327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 5485181 - 5485229
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||| ||| |||||||| ||| |||||||| ||||||||||||    
T  5485181 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 5485229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 7671228 - 7671260
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatg 347  Q
    |||||||||||||||||||||||||| ||||||    
T  7671228 ctcgtgagtttaactcagttgatagaaacaatg 7671260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 7861068 - 7861016
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||| ||| |||| || ||||||||| |||||||| |||||||||||||||    
T  7861068 atcctcttgaatttatcttagttgatagggacaatgcataatatatgcaaggt 7861016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 8350665 - 8350713
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||||||||||||||||  |  |||||||| ||||||||||||    
T  8350665 tcctcgtgagtttaactcagttggcatggacaatgcataatatatgcaa 8350713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 11637638 - 11637586
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||||||| ||  |||||||| ||| ||||||||||||    
T  11637638 tcctcgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggtt 11637586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 16076431 - 16076487
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||| ||||||||| |||||  |||||||| |||||||||||||||| | ||||||    
T  16076431 gtgagcttaactcagctgatatggacaatgcataatatatgcaaggttcagggttca 16076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 16701648 - 16701596
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| ||| |||||||| ||| |||||||  |||||||||||||||    
T  16701648 atcctcgtgagcttagctcagttggtagggacaatgaataatatatgcaaggt 16701596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 17708069 - 17708121
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||  ||||||||||||||  |||||||| ||| ||||||||||||    
T  17708069 tcctcgtgagcataactcagttgatatggacaatgcataaaatatgcaaggtt 17708121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 18789031 - 18789083
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||  ||| |||||||| |||||||||||| ||| ||||||||||||    
T  18789031 tcctcgtgatattagctcagttggtagagacaatgcataaaatatgcaaggtt 18789083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 29695010 - 29695062
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||  |||||||||||||||  |||||||| ||||||||| ||||||    
T  29695010 tcctcgtgaccttaactcagttgatatggacaatgcataatatatgtaaggtt 29695062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 35610054 - 35610002
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaag 369  Q
    ||||||||||||||| |||||| ||||||| | ||||||||||| || |||||    
T  35610054 cgtgagtttaactcaattgatatagacaatacataatatatgcaggggttaag 35610002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 41651002 - 41650954
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||| |||||||||||| ||  |||||||| |||||||||||||||    
T  41651002 tcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 41650954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 29896360 - 29896307
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  29896360 tcctcgtgagtttaattcagttgatagaaacaatgcataatatatgcaaggttt 29896307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 40967434 - 40967376
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||| |||||||||||||||  |||||||| ||||||||||||||||| |||||||    
T  40967434 tcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttca 40967376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 17779058 - 17779005
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    ||||||||||||||||||||||| |||||||||||| ||| || ||||||||||    
T  17779058 tcctcgtgagtttaactcagttggtagagacaatgcataaaatttgcaaggttt 17779005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 27244652 - 27244713
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| |||||||||||| |||||||| ||||||||||||||| || ||||||    
T  27244652 tcctcgtgagcttagctcagttgatagggacaatgcataatatatgcaaggtctagggttca 27244713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 3197145 - 3197093
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||| |||||||| ||| |||||||| ||||||||||||||||    
T  3197145 tcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaaggtt 3197093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 7537104 - 7537156
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| ||||||||||||||||  ||||||| |||||||||||||||    
T  7537104 atcctcgtgagattaactcagttgataggaacaatgcataatatatgcaaggt 7537156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 6723143 - 6723092
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||||||  |||||||  |||||||||||||||    
T  6723143 tcctcgtgagtttaactcagttgatatggacaatgtataatatatgcaaggt 6723092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 7206120 - 7206171
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| |||||||||||| |||||||||||||||    
T  7206120 tcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggt 7206171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 22608525 - 22608583
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||| ||| |||||||| |||||||||||| ||||||||||||||| | |||||||    
T  22608525 tcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtatgaggttca 22608583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 27412901 - 27412851
Alignment:
Q  314 cctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||| |||||    
T  27412901 cctcgtgagcttaactcagttggtagagacaatgcataatatatgtaaggt 27412851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 44694683 - 44694733
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||||||    
T  44694683 tcctcgtgaacttaactcagttgatatagacaatgcataatatatgcaagg 44694733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 13490723 - 13490768
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  13490723 tcgtgagtttagctcagttgatagagacaatgtataatatatgcaa 13490768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 20239337 - 20239398
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||| |||||| |||||||| ||||||| || ||||| ||||||||||||||| ||||||||    
T  20239337 atccgcgtgagcttaactcaattgatagggataatgcataatatatgcaaggtctaaggttc 20239398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 22267508 - 22267561
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    ||||||| ||||||||||||||| ||  |||||||| |||||||||||||||||    
T  22267508 tcctcgtaagtttaactcagttggtacggacaatgcataatatatgcaaggttt 22267561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 25186310 - 25186257
Alignment:
Q  311 aatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| ||||||||||| |||||||||||  |||||||| |||||||||||||||    
T  25186310 aatcatcgtgagtttagctcagttgatatggacaatgcataatatatgcaaggt 25186257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 31815951 - 31815902
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  31815951 ctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt 31815902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 4897543 - 4897599
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||| |||||||||||| ||  |||||||| |||||||||||||||||| ||||||    
T  4897543 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtttatggttca 4897599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 4944937 - 4944993
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||| |||||||||||| ||  |||||||| |||||||||||||||||| ||||||    
T  4944937 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtttatggttca 4944993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 16082127 - 16082179
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagac-aatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||| |||||| |||| ||||| |||||||||||||||    
T  16082127 tcctcgtgagtttaactcaattgataaagacaaatgcataatatatgcaaggt 16082179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 24548112 - 24548172
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    ||||||||||||||||||| ||| || ||||||||| ||||||||| ||||| || |||||    
T  24548112 tcctcgtgagtttaactcaattggtatagacaatgcataatatatgtaaggtatagggttc 24548172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 27935054 - 27935102
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||| ||| ||||||||  ||||||||||||||    
T  27935054 tcgtgagtttaactcagttggtagggacaatgcagaatatatgcaaggt 27935102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 35287731 - 35287679
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||  |||||||||||| |||||||| ||||| |||||||||    
T  35287731 atcctcgtgagtttggctcagttgatagggacaatgcataatagatgcaaggt 35287679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 37320579 - 37320531
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||| |||||||||||| || ||||||||| ||||||||||||||||    
T  37320579 cgtgagcttaactcagttggtaaagacaatgcataatatatgcaaggtt 37320531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 2256966 - 2257017
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||| ||  |||||||| |||||||||||||||    
T  2256966 tcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 2257017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 29734686 - 29734737
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| ||||||||| |||||||||||  |||||||| |||||||||||||||    
T  29734686 tccttgtgagtttagctcagttgatatggacaatgcataatatatgcaaggt 29734737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 33063981 - 33064032
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||||||  |||||||| |||||||||||||||    
T  33063981 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggt 33064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 34977199 - 34977250
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||| ||  |||||||| |||||||||||||||    
T  34977199 tcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 34977250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 39761437 - 39761484
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||  |||||||| |||||||||||||||    
T  39761437 cgtgagtttagctcagttgataaggacaatgcataatatatgcaaggt 39761484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 374
Target Start/End: Complemental strand, 43117254 - 43117195
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||| |||||||| ||  |||||||| ||||||||||||||| | |||||||    
T  43117254 ctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaaggtctgaggttca 43117195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 5168639 - 5168593
Alignment:
Q  319 tgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||| |||||||||||||||| || ||||| ||||||||||||||||    
T  5168639 tgagcttaactcagttgatagggataatgcataatatatgcaaggtt 5168593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 5676734 - 5676784
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||||| |||||||||||| ||  |||||||| ||||||||||||||    
T  5676734 tcctcgtgagcttaactcagttggtaatgacaatgcataatatatgcaagg 5676784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 374
Target Start/End: Complemental strand, 9064656 - 9064594
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||| |||||||||||| ||| |||||||||||   ||||||||||| | ||||||    
T  9064656 atcctcgtgagcttaactcagttggtagggacaatgcgtaccttatgcaaggttcagggttca 9064594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 366
Target Start/End: Complemental strand, 9547464 - 9547422
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||||||||  |||||||| |||||||||||||||||    
T  9547464 ttaactcagttgatatggacaatgcataatatatgcaaggttt 9547422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 9964489 - 9964535
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||||||||||||||||   ||||| |||||||||||||||    
T  9964489 tcgtgagtttaactcagttgatatgaacaatacgtaatatatgcaag 9964535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 16204878 - 16204832
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||| |||||||||||||||  |||||||| |||||||||||||||    
T  16204878 gtgagcttaactcagttgataaggacaatgcataatatatgcaaggt 16204832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 20565144 - 20565090
Alignment:
Q  310 taatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| |||||||| ||| |||||||| ||| |||||||| |||||||||||||||    
T  20565144 taattctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 20565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 374
Target Start/End: Complemental strand, 25395497 - 25395447
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||| |||  ||||||| |||||||||||||||| ||||||||    
T  25395497 ttaactcagttggtaggaacaatgcataatatatgcaaggttcaaggttca 25395447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 374
Target Start/End: Original strand, 38904055 - 38904117
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||| ||| |||  |||||||| ||||||| |||||||||||||||| | ||||||    
T  38904055 atcctcgtgagcttagctcgattgatagatacaatgcataatatatgcaaggttcagggttca 38904117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 4640701 - 4640660
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||    
T  4640701 ttaacccagttgatagagacagtgcataatatatgcaaggtt 4640660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 9383275 - 9383222
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||| ||| |||||||| ||  |||||||| |||||||||||||||||    
T  9383275 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggttt 9383222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 9842268 - 9842215
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||| ||| |||||||| ||| |||||||| ||| |||||||||||||    
T  9842268 tcctcgtgagcttagctcagttggtagggacaatgcataaaatatgcaaggttt 9842215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 342
Target Start/End: Original strand, 34388629 - 34388658
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagaga 342  Q
    ||||||||||||||||||||||||||||||    
T  34388629 tcctcgtgagtttaactcagttgatagaga 34388658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 37119319 - 37119274
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||||||||||||||||   ||||||| ||||||||||||||    
T  37119319 gtgagtttaactcagttgatatgaacaatgcataatatatgcaagg 37119274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 45032688 - 45032737
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||| ||| |||||||| ||| |||||||| |||||||||||||    
T  45032688 tcctcgtgagcttacctcagttggtagggacaatgcataatatatgcaag 45032737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 10332342 - 10332290
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| ||| |||||||||||  |||||||| ||||||||| |||||    
T  10332342 atcctcgtgagcttagctcagttgataaggacaatgcataatatatggaaggt 10332290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 12413493 - 12413549
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||| ||| |||||||  |||||||| ||||||||||||||| | |||||||    
T  12413493 gtgagtttatctcggttgataaggacaatgcataatatatgcaaggtctgaggttca 12413549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 12425553 - 12425609
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||| ||| |||||||  |||||||| ||||||||||||||| | |||||||    
T  12425553 gtgagtttatctcggttgataaggacaatgcataatatatgcaaggtctgaggttca 12425609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 22571931 - 22571883
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||  ||| ||||||||||| ||||||||| ||||||||||||    
T  22571931 tcctcgtgaacttagctcagttgatatagacaatgcataatatatgcaa 22571883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 30243245 - 30243297
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||  ||| |||||||| |||||||||||| |||||||| |||||||    
T  30243245 tcctcgtgaacttagctcagttggtagagacaatgcataatatatacaaggtt 30243297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 34464474 - 34464426
Alignment:
Q  314 cctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||||||||| |||||||| ||  |||||||| |||||||||||||    
T  34464474 cctcgtgagtttagctcagttggtatggacaatgcataatatatgcaag 34464426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 39256290 - 39256250
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||| |||||||||||| ||||||| |||||||    
T  39256290 ttaactcagttggtagagacaatgcataatataagcaaggt 39256250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 42475176 - 42475116
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||| |||||||||||| || | ||||||| ||| ||||||||||| | ||||||    
T  42475176 tcctcgtgagcttaactcagttggtataaacaatgcataaaatatgcaaggtctgaggttc 42475116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 7824802 - 7824853
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  7824802 tcctcgtgagtttaactcagttgatatagacaatacataatatatgcaaggt 7824853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 12976664 - 12976617
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  12976664 cgtgagtttaactcagttgatagggacaatgcataatatatgcaaggt 12976617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 29791774 - 29791832
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||||||||||||||||| ||||| | ||||||||| ||||||| |||||||    
T  29791774 tcgtgagtttaactcagttgatagaaacaatacataatatatgtaaggtttgaggttca 29791832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 2078237 - 2078288
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||  |||||||||||| |||||||||||| |||||||||||||||||    
T  2078237 ctcgtgaacttaactcagttggtagagacaatgcataatatatgcaaggttt 2078288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 7827503 - 7827554
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||| |||||    
T  7827503 tcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggt 7827554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 7829891 - 7829942
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||| |||||    
T  7829891 tcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggt 7829942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 46226143 - 46226092
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||| ||| ||| |||||||| |||||||||||||||    
T  46226143 tcctcgtgagtttaactcaattggtagggacaatgcataatatatgcaaggt 46226092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 8075780 - 8075841
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||| || ||| ||||||| ||||||||||||| ||||||||||||||| | |||||||    
T  8075780 tcctcgtaagcttacctcagttaatagagacaatgcataatatatgcaaggtctgaggttca 8075841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 20370348 - 20370287
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    ||||||||||| ||| |||||||||||  |||||||| ||| |||||||||||||| |||||    
T  20370348 atcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggtttagggttc 20370287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 31138412 - 31138461
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||| || ||| ||||||||||||||||||||| |||||||||||||    
T  31138412 tcctcgtaagcttatctcagttgatagagacaatgcataatatatgcaag 31138461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 37921065 - 37921016
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||||||||||||| |||||||||||| || ||||| ||||||||||||    
T  37921065 atcctcgtgagtttagctcagttgatagggataatgcataatatatgcaa 37921016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 38387967 - 38388016
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||| ||| |||||||||||| |||||||| |||||||||||||    
T  38387967 tcctcgtgagcttagctcagttgatagtgacaatgcataatatatgcaag 38388016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 48517669 - 48517718
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||||||||||||||||  ||||||| |||||||| |||||||    
T  48517669 tcgtgagtttaactcagttgataggaacaatgcataatatatacaaggtt 48517718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 13829140 - 13829092
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||  ||| |||||||| |||||||||||||||    
T  13829140 tcgtgagtttaactcagtttttagggacaatgcataatatatgcaaggt 13829092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 27397674 - 27397618
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    ||||||||||||||||||| ||  |||||||  ||||||||||||||| ||||||||    
T  27397674 cgtgagtttaactcagttggtatggacaatgtataatatatgcaaggtctaaggttc 27397618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 33223863 - 33223915
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| ||| |||||||| |||| ||||||| ||||||||||||||||    
T  33223863 tcctcgtgagcttagctcagttggtagaaacaatgcataatatatgcaaggtt 33223915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 42401430 - 42401478
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||||||    
T  42401430 tcgtgagtttaactcagttggtagggacaatgcatagtatatgcaaggt 42401478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 5186828 - 5186879
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||||||||| || ||| |||||||| |||||||||||||||    
T  5186828 tcctcgtgagcttaactcagctggtagggacaatgcttaatatatgcaaggt 5186879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 7464557 - 7464506
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||| ||| |||||||| ||||||||| |||||    
T  7464557 tcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggt 7464506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 7738664 - 7738715
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||| ||| |||||||| ||| |||||||||||    
T  7738664 tcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaaggt 7738715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 18870791 - 18870740
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| ||| |||||||| |||||||||||||||    
T  18870791 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 18870740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 32753823 - 32753873
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||||| || ||||||||||||| |||||||| |||||||| |||||    
T  32753823 tcctcgtgagcttgactcagttgatagggacaatgcataatatatacaagg 32753873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 1111897 - 1111856
Alignment:
Q  323 tttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||| |||||| | |||||||||||||||    
T  1111897 tttaactcagttgatagggacaatacataatatatgcaaggt 1111856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 3755336 - 3755385
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||| ||| |||| ||| |||||||| |||||||||||||||    
T  3755336 ctcgtgagtttagctcggttggtagggacaatgcataatatatgcaaggt 3755385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 8127458 - 8127511
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||| |||||||||||| ||  |||||||| ||| |||||||||||||    
T  8127458 tcctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggttt 8127511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 10922370 - 10922325
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||| |||||||||||| ||| |||||||| |||||||||||||    
T  10922370 cgtgagcttaactcagttggtagggacaatgcataatatatgcaag 10922325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 16980420 - 16980359
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| |||||||| ||  |||||||| |||||||||||||||| | ||||||    
T  16980420 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcatggttca 16980359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 29687077 - 29687138
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| |||||||||||  ||||||   || ||||||||||||||||||||||    
T  29687077 tcctcgtgagcttagctcagttgatatggacaatatatattatatgcaaggtttaaggttca 29687138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 35126331 - 35126286
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||||||||||||||| ||| || ||||| |||||||||||||    
T  35126331 cgtgagtttaactcagttggtagggataatgcataatatatgcaag 35126286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 48234519 - 48234466
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||| |||||||||||||||| | | |||||||| ||||||||||| |||||    
T  48234519 tcctcgagagtttaactcagttggtggggacaatgcataatatatgcatggttt 48234466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 49097266 - 49097319
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||| ||| |||||||| ||||| |||||| ||| ||||||||||||    
T  49097266 atcctcgtgagcttatctcagttggtagagccaatgcataaaatatgcaaggtt 49097319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 53162193 - 53162254
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| |||| ||||||  |||||||| ||| ||||||||||||| |||||||    
T  53162193 tcctcgtgagcttagctcaattgatatggacaatgcataaaatatgcaaggtttgaggttca 53162254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 1149135 - 1149075
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||| ||| |||||||| ||  |||||||| ||||||||||||||| || |||||    
T  1149135 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctagggttc 1149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 1757735 - 1757687
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||| |||||||||||| |||  ||||||| ||||||||||||    
T  1757735 tcctcgtgagcttaactcagttggtaggaacaatgcataatatatgcaa 1757687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 2662095 - 2662139
Alignment:
Q  321 agtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||| |||||||| || ||||||||| ||||||||||||||||    
T  2662095 agtttagctcagttggtaaagacaatgcataatatatgcaaggtt 2662139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 5428503 - 5428451
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||| ||||||||| |||| |||||| | ||||||| |||||||||||||||    
T  5428503 atccttgtgagtttagctcaattgataaaaacaatgcataatatatgcaaggt 5428451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 5702239 - 5702184
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||| ||| |||||||| || ||||||||| ||||||||||||||||| ||||||    
T  5702239 cgtgagcttagctcagttggta-agacaatgcataatatatgcaaggtttgaggttc 5702184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 17507765 - 17507713
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||  ||| |||||||||||  |||||||| ||||||||||||||||    
T  17507765 tcctcgtgaaattagctcagttgatattgacaatgcataatatatgcaaggtt 17507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 21331483 - 21331431
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| ||| |||||||| ||  |||||||| ||||||||||||||||    
T  21331483 tcctcgtgagcttagctcagttgttatggacaatgcataatatatgcaaggtt 21331431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 46088866 - 46088814
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgt-aatatatgcaaggt 364  Q
    |||||||||| || |||||||||||| ||||||||| | ||||||||||||||    
T  46088866 tcctcgtgagcttgactcagttgatatagacaatgcataaatatatgcaaggt 46088814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 41520960 - 41521010
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||| |||||||||||| |||||||||||||||| ||||||||    
T  41520960 ttaactcagttggtagagacaatgcataatatatgcaaggttcaaggttca 41521010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 38934884 - 38934933
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  38934884 ttaactcagttattagagacaatgcataatatatgcaaggtttaaggttc 38934933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 363
Target Start/End: Original strand, 24540848 - 24540888
Alignment:
Q  323 tttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  24540848 tttaactcagttgatagagacaatgcataatatatgcaagg 24540888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 51002282 - 51002342
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||| |||||||||||| || ||||||||| ||| ||||||||||||| ||||||    
T  51002282 tcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaaggtttgaggttc 51002342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 20096336 - 20096285
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||||||||||    
T  20096336 tcctcgtgagtttaactcagttggtagggataatgcataatatatgcaaggt 20096285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 22448590 - 22448649
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||||||||| ||||||   ||||||||||||||||||||| || ||||||||    
T  22448590 ctcgtgagtttaactcaattgataagaacaatgcgtaatatatgcaagattcaaggttca 22448649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 7248334 - 7248392
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||||||||||| | |||||||| ||| ||||||||||| || ||||||    
T  7248334 tcgtgagtttaactcagttgattgggacaatgcataaaatatgcaaggtctagggttca 7248392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 24063263 - 24063225
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  24063263 ttaactcagttgatagagacaatgcataatatatgcaag 24063225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 374
Target Start/End: Complemental strand, 39842079 - 39842017
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||  |||||||||||||||  |||||||| ||||||||| ||||||| |||||||    
T  39842079 atcctcgtgatcttaactcagttgataaggacaatgcataatatatgtaaggtttgaggttca 39842017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 45970774 - 45970724
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    ||||||||||| |||||||||||| |||| ||||||| |||||||||||||    
T  45970774 atcctcgtgagcttaactcagttggtagaaacaatgcataatatatgcaag 45970724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 3299156 - 3299099
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||||||||||| |  | ||||||| ||||||||||||||||| |||||||    
T  3299156 cgtgagtttaactcagttggttaaaacaatgcataatatatgcaaggtttgaggttca 3299099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 6460145 - 6460100
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatat 357  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||    
T  6460145 atccccgtgagtttaactcagttaatagagacaatgcataatatat 6460100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 12712084 - 12712035
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||  |||||||| |||||||||||||||| |||||||||||||    
T  12712084 tcctcgtgaacttaactcatttgatagagacaatgcataatatatgcaag 12712035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 17423237 - 17423192
Alignment:
Q  319 tgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||    
T  17423237 tgaggttaactcagttggtagagacaatgcataatatatgcaaggt 17423192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 21318319 - 21318258
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||| ||| |||||||||||| ||| |||||||| ||||||||||||||| || ||||||    
T  21318319 tcctcgcgagcttaactcagttggtagggacaatgcataatatatgcaaggtctagggttca 21318258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 22630426 - 22630365
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| |||||||| ||| |||||||| ||||||||||||||| | |||||||    
T  22630426 tcctcgtgagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttca 22630365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 43034408 - 43034347
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| |||||||||||| ||  |||||||| ||||||||||||||| | |||||||    
T  43034408 tcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttca 43034347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 44918276 - 44918231
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||||||||||||||||||||||||   ||||||||||||    
T  44918276 tcgtgagtttaactcagttgatagagacaatatataatatatgcaa 44918231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 49233853 - 49233816
Alignment:
Q  321 agtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    |||||||||||||||||||||||||||| |||||||||    
T  49233853 agtttaactcagttgatagagacaatgcataatatatg 49233816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 19124684 - 19124628
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||| ||||||||||||||| ||||||| | ||||||||||||||| | ||||||    
T  19124684 cgtgagcttaactcagttgataaagacaatacataatatatgcaaggtctgaggttc 19124628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 20799477 - 20799409
Alignment:
Q  296 taaactgagaaaattaatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||| || |||||  |||||||||| ||| |||||||| ||| |||||||| |||||||||||||||    
T  20799477 taaacttagcaaattggtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 20799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 21317401 - 21317353
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||| ||| |||||||| |||||||||||| |||||||||||||||    
T  21317401 tcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggt 21317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 35378254 - 35378202
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| |||||||| ||||||  ||||||| ||||||||||||||||    
T  35378254 atcctcgtgagcttaactcaattgataaggacaatgtgtaatatatgcaaggt 35378202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 43183044 - 43183000
Alignment:
Q  328 ctcagttgatagagacaatgcgtaatatatgcaaggtttaaggtt 372  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||    
T  43183044 ctcagttgataaagacaatgcataatatatgcaaggtctaaggtt 43183000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 52936641 - 52936697
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||| ||||||||||||||||| ||||||  ||||||||| ||||||| |||||||    
T  52936641 gtgagcttaactcagttgatagaaacaatgtataatatatgtaaggtttgaggttca 52936697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 7030959 - 7030908
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||||||| || ||||||||| ||| |||||||||||    
T  7030959 tcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaaggt 7030908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 13276124 - 13276175
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| |||||||| ||| ||| |||||||| |||||||||||||||    
T  13276124 tcctcgtgagcttaactcaattggtagggacaatgcataatatatgcaaggt 13276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 21935007 - 21935058
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||| || ||||||||| |||| |||| |||||    
T  21935007 tcctcgtgagtttaactcagttggtatagacaatgcataatgtatgtaaggt 21935058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 30380527 - 30380578
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    ||||||||||||||||||||| ||  |||||||  |||||||||||||||||    
T  30380527 ctcgtgagtttaactcagttggtaaggacaatgtataatatatgcaaggttt 30380578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 342
Target Start/End: Complemental strand, 34019521 - 34019490
Alignment:
Q  311 aatcctcgtgagtttaactcagttgatagaga 342  Q
    ||||||||||||||||||||||||||||||||    
T  34019521 aatcctcgtgagtttaactcagttgatagaga 34019490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 36203231 - 36203282
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||||||  |||||||| |||||||||||||||    
T  36203231 tcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaaggt 36203282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 36662435 - 36662384
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||| || ||||||||| ||| |||| ||||||    
T  36662435 tcctcgtgagtttaactcagttggtatagacaatgcataaaatatacaaggt 36662384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 40847128 - 40847085
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||    
T  40847128 gtgagcttaactcagttgatagagacaatacataatatatgcaa 40847085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 43722760 - 43722811
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||| |||||    
T  43722760 tcctcgtgagtttaactcagttggtatggacaatgcataatatatgtaaggt 43722811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 374
Target Start/End: Original strand, 48171882 - 48171937
Alignment:
Q  319 tgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||| |||||||||||| |||||||||||  ||||||||||||||||  |||||||    
T  48171882 tgagcttaactcagttggtagagacaatgtataatatatgcaaggttctaggttca 48171937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 50362205 - 50362154
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| ||| |||||||| |||||||||||||||    
T  50362205 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 50362154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 360
Target Start/End: Complemental strand, 50376717 - 50376674
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgca 360  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||    
T  50376717 cgtgagtttaactcagttggtagagacattgcataatatatgca 50376674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 365
Target Start/End: Original strand, 5520130 - 5520179
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||||||||||  || |||||||| ||||||||||||||||    
T  5520130 ctcgtgagtttaactcagttgcaag-gacaatgcataatatatgcaaggtt 5520179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 35823382 - 35823432
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||| ||||||  ||||| || |||||||||||||||||||||||||    
T  35823382 ttaactcaattgatatggacaaggcataatatatgcaaggtttaaggttca 35823432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 56204947 - 56204993
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||| ||  |||||||| |||||||||||||||    
T  56204947 gtgagtttaactcagttggtaaggacaatgcataatatatgcaaggt 56204993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 2434522 - 2434473
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||| |||||||||||| ||||||| |||| || ||||||||||||    
T  2434522 ctcgtgagcttaactcagttggtagagacgatgcatactatatgcaaggt 2434473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 6459988 - 6459939
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||| |||||||||||||||  |||||||| ||||||||| |||||    
T  6459988 ctcgtgagcttaactcagttgatatggacaatgcataatatatgtaaggt 6459939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 6520077 - 6520126
Alignment:
Q  324 ttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttc 373  Q
    |||||||||||  || ||||||||| ||||||||||||||||| ||||||    
T  6520077 ttaactcagttagtaaagacaatgcataatatatgcaaggtttgaggttc 6520126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 12671814 - 12671765
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||||||| |||||||| || ||||||||| ||| |||||||||    
T  12671814 tcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaag 12671765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 16304166 - 16304113
Alignment:
Q  311 aatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||| |||||| |||||||| ||  |||||||| |||||||||||||||    
T  16304166 aatcctcgtaagtttagctcagttggtatggacaatgcataatatatgcaaggt 16304113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 16733585 - 16733536
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||| ||||||||||||||| ||| ||||  |||||||||||||    
T  16733585 tcctcgtgagcttaactcagttgataaagataatgtataatatatgcaag 16733536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 21465606 - 21465659
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    ||||||||||||||||||||||  ||  |||||||| ||||||||| |||||||    
T  21465606 tcctcgtgagtttaactcagttagtaaggacaatgcataatatatgtaaggttt 21465659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 22040652 - 22040697
Alignment:
Q  320 gagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||| |||||||||||  |||||||| ||||||||||||||||    
T  22040652 gagtttagctcagttgatatggacaatgcataatatatgcaaggtt 22040697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 23626375 - 23626420
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatat 357  Q
    |||||||||||||||||||||||| || ||||||||  ||||||||    
T  23626375 atcctcgtgagtttaactcagttggtatagacaatgtataatatat 23626420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 27550798 - 27550749
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||| ||||||||||||| ||| | ||||| |||||||||||||||    
T  27550798 ctcgtgagcttaactcagttgaaagaaataatgcataatatatgcaaggt 27550749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 39171436 - 39171375
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| |||||||||||  |||||||| ||| |||||||||||| | ||||||    
T  39171436 tcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcagggttca 39171375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 41536920 - 41536969
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||||| ||||||  |||||| | ||||||||||||||||    
T  41536920 tcgtgagtttaactcaattgataaggacaatacataatatatgcaaggtt 41536969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 45289320 - 45289275
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||| |||||||||||||||||| ||| ||||| ||||||||||||    
T  45289320 tcgtaagtttaactcagttgatacagataatgcataatatatgcaa 45289275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 47490770 - 47490721
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||||||||| ||  || ||||||||| ||||||||||||    
T  47490770 tcgtgagtttaactcagttggtatggataatgcgtaaaatatgcaaggtt 47490721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 54500566 - 54500615
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||| ||| |||||||| |||||||||||| ||||||||| |||||    
T  54500566 ctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggt 54500615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 55962644 - 55962603
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaata 354  Q
    ||||||| |||||||||||||||||| ||||||||| |||||    
T  55962644 tcctcgtaagtttaactcagttgatatagacaatgcataata 55962603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 11144716 - 11144680
Alignment:
Q  328 ctcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  11144716 ctcagttgataaagacaatgcataatatatgcaaggt 11144680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 14136086 - 14136130
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatat 357  Q
    |||||||||| ||| ||||||||||| ||||||||| ||||||||    
T  14136086 tcctcgtgagcttagctcagttgataaagacaatgcataatatat 14136130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 14577573 - 14577525
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||||||| |||||||| ||  |||||||| ||||||||||||    
T  14577573 tcctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaa 14577525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 28435314 - 28435262
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||| ||||||||| |||||||| ||  |||||||| ||||||||||||||||    
T  28435314 tccttgtgagtttagctcagttggtatggacaatgcataatatatgcaaggtt 28435262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 29908054 - 29908102
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||| |||||||||||| ||  |||||||| |||||||||||||||    
T  29908054 tcgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 29908102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 41144458 - 41144406
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgt-aatatatgcaaggt 364  Q
    |||||||||| ||||||||||||||| ||||||| | | ||||||||||||||    
T  41144458 tcctcgtgagcttaactcagttgatatagacaattcataaatatatgcaaggt 41144406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 43374338 - 43374286
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| ||| |||||||||||  |||||||| ||| ||||||||||||    
T  43374338 tcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggtt 43374286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 48067130 - 48067178
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||||| |||||||||| ||| |||||||  ||||||||||||||    
T  48067130 ctcgtgagttaaactcagttggtagggacaatgtataatatatgcaagg 48067178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 48955287 - 48955335
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||| ||| |||||||| ||  |||||||||||||||||||||    
T  48955287 tcctcgtgagcttatctcagttggtaaggacaatgcgtaatatatgcaa 48955335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 51436672 - 51436620
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||  |||||||||||||||   ||||||| ||||||||||||||||    
T  51436672 tcctcgtgaacttaactcagttgatacgaacaatgcataatatatgcaaggtt 51436620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 11242047 - 11241998
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  11242047 cgtgagtttaactcagttgacagagacaatgcataatatatgtaaggttt 11241998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 1864283 - 1864231
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttta 367  Q
    ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  1864283 ctcgtaagtttaacttagttggtagagacaatgcataatatatgcaaggttta 1864231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 34877668 - 34877716
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  34877668 ctcgtgagtttaactcaattgatagagacaatgcataaaatatgcaagg 34877716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 16033516 - 16033465
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| || ||||||||||||| |||||||| |||||||||||||||    
T  16033516 tcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaaggt 16033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 36672780 - 36672729
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||| |||||    
T  36672780 tcctcatgagtttaactcagttgatagagacaatccataatatatgtaaggt 36672729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 41974758 - 41974817
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||||||||  ||||||||||| || ||||| ||||||||||||||||| |||||||    
T  41974758 ctcgtgagtttagttcagttgatagggataatgcataatatatgcaaggtttgaggttca 41974817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 44641522 - 44641572
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||||||||||| |||||||||||  |||||||| ||||||||||||||    
T  44641522 tcctcgtgagtttagctcagttgatatggacaatgcataatatatgcaagg 44641572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 11014227 - 11014276
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  11014227 tcctcgtgagtttagctcagttggtagagacagtgcataatatatgcaag 11014276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 15729425 - 15729470
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||    
T  15729425 tcctcgtgagcttaactcagttggtagagacaatgcataatatatg 15729470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 19396253 - 19396204
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    ||||||||||||||||||| ||| || ||||| |||||||||||||||||    
T  19396253 cgtgagtttaactcagttggtagggataatgcataatatatgcaaggttt 19396204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 30678879 - 30678818
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| |||||||||||| ||| |||||||| ||||||||| |||||| | ||||||    
T  30678879 tcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggttcatggttca 30678818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 41142738 - 41142701
Alignment:
Q  327 actcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||||| |||||||||||||||    
T  41142738 actcagttgatagagacaatgcataatatatgcaaggt 41142701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 41573335 - 41573290
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||    
T  41573335 tcctcgtgagtttaactcagttggtagggacaatgcataatatatg 41573290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 1091174 - 1091226
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  1091174 tcctcgtgagcttaactcagttggtatagacaatgcataatgtatgcaaggtt 1091226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 2889989 - 2889941
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  2889989 tcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt 2889941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 5280625 - 5280677
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| ||||||||||||  ||||||| ||| |||||||||||||||    
T  5280625 atcctcgtgagcttaactcagttggaagagacagtgcataatatatgcaaggt 5280677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 44220981 - 44221033
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||| |||||| ||||||||||||||||||  ||||||| ||||||    
T  44220981 atcctcgtgagcttaacttagttgatagagacaatgcacaatatatacaaggt 44221033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 3528535 - 3528484
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||| ||||||||||||| ||||||  ||||||||| |||||    
T  3528535 tcctcgtgagtttagctcagttgatagaaacaatgtataatatatgtaaggt 3528484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 358
Target Start/End: Original strand, 8153132 - 8153175
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    ||||||||||||||||||||| || ||||||||| |||||||||    
T  8153132 ctcgtgagtttaactcagttggtatagacaatgcataatatatg 8153175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 21400089 - 21400038
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| ||| |||||||| |||||||||||||||    
T  21400089 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 21400038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 29234040 - 29233989
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||| |||||||| || ||||||||| ||| |||||||||||    
T  29234040 tcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaaggt 29233989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 31401715 - 31401668
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||| | | ||||||| |||||||||||||||    
T  31401715 cgtgagtttaactcagttgacaaaaacaatgcataatatatgcaaggt 31401668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 36371106 - 36371055
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| |||||||||||| ||||||||| |||||    
T  36371106 tcctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggt 36371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 48131294 - 48131243
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||||||  ||||| ||||| ||||||||| |||||    
T  48131294 tcctcgtgagtttaactcagttggcagagataatgcataatatatgtaaggt 48131243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 52441577 - 52441526
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| ||| |||||||| || ||||||||| |||||||||||||||    
T  52441577 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaaggt 52441526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 9116935 - 9116893
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    |||||||||||||||||||||||  |||||||| |||||||||    
T  9116935 tcgtgagtttaactcagttgatatggacaatgcataatatatg 9116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 10292935 - 10292981
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaagg 363  Q
    |||||| |||||||||||||||| |||||||| ||||||||| ||||    
T  10292935 cgtgagcttaactcagttgatagggacaatgcataatatatgtaagg 10292981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 24978242 - 24978300
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    ||||||| |||||||||||| || ||| ||| | |||||||||||||||||| ||||||    
T  24978242 tcgtgagcttaactcagttggtatagataatacataatatatgcaaggtttagggttca 24978300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 40618908 - 40618954
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaag 362  Q
    |||||||||||||||||||| || ||| ||||| |||||||||||||    
T  40618908 tcgtgagtttaactcagttggtaaagataatgcataatatatgcaag 40618954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 40922785 - 40922735
Alignment:
Q  311 aatcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||||||||| ||||||||||||||||  |||||||| || |||||||||    
T  40922785 aatcctcgtgaatttaactcagttgataatgacaatgcatagtatatgcaa 40922735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 47961350 - 47961304
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||| ||||||||  ||||||||||| |||||||||||||||    
T  47961350 gtgagtttagctcagttggcagagacaatgcataatatatgcaaggt 47961304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 49868011 - 49868057
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||||  || ||||| |||||||||||||||    
T  49868011 gtgagtttaactcagttgatatggataatgcataatatatgcaaggt 49868057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 49875664 - 49875614
Alignment:
Q  314 cctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||| |||||||||||| ||  |||||||| |||||||||||||||    
T  49875664 cctcgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 49875614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 51241503 - 51241537
Alignment:
Q  331 agttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||||||| ||||||||||||||||    
T  51241503 agttgatagagacaatgcataatatatgcaaggtt 51241537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 1824662 - 1824707
Alignment:
Q  320 gagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||||||||| ||| ||||| | ||||||||||||||||    
T  1824662 gagtttaactcagttgacagaaacaatacataatatatgcaaggtt 1824707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 3693862 - 3693801
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| ||| ||||||||||| |||||| || ||||||||| ||||| | |||||||    
T  3693862 tcctcgtgagcttagctcagttgatatagacaaagcataatatatgtaaggtctgaggttca 3693801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 7925359 - 7925404
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    |||||||||| ||| |||||||| |||||||||||| |||||||||    
T  7925359 tcctcgtgagcttagctcagttggtagagacaatgcataatatatg 7925404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 8266252 - 8266191
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||  |||||||||||| ||  |||||||| |||| |||||||||||| |||||||    
T  8266252 tcctcgtgatcttaactcagttggtatggacaatgcataatgtatgcaaggtttgaggttca 8266191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 14905482 - 14905437
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    ||||||||||||||||||||||| |||| ||||| | |||||||||    
T  14905482 tcctcgtgagtttaactcagttggtagaaacaatacttaatatatg 14905437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 28006740 - 28006785
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||| |||||||||||||| ||| ||||||||| ||||||||||||    
T  28006740 tcgtaagtttaactcagttaatatagacaatgcataatatatgcaa 28006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 36467091 - 36467030
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||| ||||| |||| ||| ||||||  |||||||| ||||||||||||||| |||||||||    
T  36467091 tccttgtgagcttaattcaattgatatggacaatgcataatatatgcaaggtataaggttca 36467030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 40818602 - 40818663
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||| |||||||||||  |||||||||||| |||  |||||||||| | |||||||    
T  40818602 tcctcgtgagcttaactcagttagtagagacaatgcataagttatgcaaggtctgaggttca 40818663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 366
Target Start/End: Complemental strand, 41063138 - 41063093
Alignment:
Q  321 agtttaactcagttgatagagacaatgcgtaatatatgcaaggttt 366  Q
    ||||||||||| ||| |||||||||||| |||||||| ||||||||    
T  41063138 agtttaactcaattggtagagacaatgcataatatattcaaggttt 41063093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 43840391 - 43840346
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatg 358  Q
    ||||||||||||||||||||||||||  |||||||| ||| |||||    
T  43840391 tcctcgtgagtttaactcagttgatatggacaatgcataaaatatg 43840346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 3431325 - 3431373
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||||||||||||||||||||| |||  | ||||| ||||||||||||    
T  3431325 tcctcgtgagtttaactcagttggtaggaagaatgcataatatatgcaa 3431373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 5279436 - 5279388
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    ||||||||||||||||||||| | ||  |||||||| ||||||||||||    
T  5279436 tcctcgtgagtttaactcagtcggtatggacaatgcataatatatgcaa 5279388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 7574181 - 7574133
Alignment:
Q  316 tcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||||||||||| ||  |||||||| || ||||||||||||    
T  7574181 tcgtgagtttaactcagttggtaaggacaatgcatagtatatgcaaggt 7574133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 13401608 - 13401644
Alignment:
Q  329 tcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  13401608 tcagttgatagagacaatgcataatatatgtaaggtt 13401644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 17669640 - 17669692
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||| ||||| || ||||||||||||| |||||||  ||||||||||||||||    
T  17669640 tccttgtgagcttgactcagttgatagggacaatgtataatatatgcaaggtt 17669692  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 24124892 - 24124844
Alignment:
Q  317 cgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||||||| ||  |||||||| ||||||||||||||||    
T  24124892 cgtgagtttagctcagttgttaaggacaatgcataatatatgcaaggtt 24124844  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 26010217 - 26010269
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||||||| |||| ||||||| |||||||  ||||| ||||||||||    
T  26010217 tcctcgtgagtttagctcaattgatagtgacaatgtataatacatgcaaggtt 26010269  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 27533238 - 27533290
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| |||  ||||||| ||| |||||||| ||||||||||||||||    
T  27533238 tcctcgtgagcttagatcagttggtagggacaatgcataatatatgcaaggtt 27533290  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 29935978 - 29936026
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||| |||||||||||||||||| ||  |||||||| ||||||||||||    
T  29935978 tccttgtgagtttaactcagttggtatggacaatgcataatatatgcaa 29936026  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 34848476 - 34848532
Alignment:
Q  318 gtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||| |||||| | ||||||| | ||||||||||||||| | |||||||    
T  34848476 gtgagtttaacttagttgacaaagacaattcataatatatgcaaggtctgaggttca 34848532  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 39916957 - 39916993
Alignment:
Q  321 agtttaactcagttgatagagacaatgcgtaatatat 357  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  39916957 agtttaactcagttggtagagacaatgcataatatat 39916993  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 41998346 - 41998390
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatat 357  Q
    |||||||||| |||||||||||||||| |||||| | ||||||||    
T  41998346 tcctcgtgagattaactcagttgatagggacaattcataatatat 41998390  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 99032 - 99083
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||| || ||||||||||||| |||||||| |||||||||||||||    
T  99032 tcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaaggt 99083  T

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Target: scaffold0143 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 4463 - 4512
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||| || ||||||||| |||||||| |||| ||||||||||    
T  4463 ctcgtgagtttagcttagttgatagggacaatgcataatttatgcaaggt 4512  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 14250 - 14201
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||| ||   ||||||| |||||||||||||||    
T  14250 ctcgtgagtttaactcagttggtatgaacaatgcataatatatgcaaggt 14201  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 48018 - 48067
Alignment:
Q  315 ctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    ||||||||||||||||||||||||   | ||||| |||||||||||||||    
T  48018 ctcgtgagtttaactcagttgataagcataatgcataatatatgcaaggt 48067  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 63857 - 63918
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||| |||||||| ||| |||||||  |||||||| ||| |||| |||||||    
T  63857 tcctcgtgagtttagctcagttggtagggacaatgtataatatatacaaagtttgaggttca 63918  T

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Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 71189 - 71250
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtttaaggttca 374  Q
    |||||||||||||| |||||||| ||| |||||||  |||||||| ||| |||| |||||||    
T  71189 tcctcgtgagtttagctcagttggtagggacaatgtataatatatacaaagtttgaggttca 71250  T

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Target: scaffold1160 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 1770 - 1726
Alignment:
Q  321 agtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    ||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  1770 agtttaactcagttggtagggacaatgcataaaatatgcaaggtt 1726  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 25383 - 25435
Alignment:
Q  312 atcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||| |||||| |||||||||||| ||  |||||||| |||||||||||||||    
T  25383 atccccgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 25435  T

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Target: scaffold0043 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 90471 - 90523
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaaggtt 365  Q
    |||||||||| ||| || ||||| || ||||||||||||||||||| ||||||    
T  90471 tcctcgtgagcttagcttagttggtatagacaatgcgtaatatatgtaaggtt 90523  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 31973 - 31937
Alignment:
Q  328 ctcagttgatagagacaatgcgtaatatatgcaaggt 364  Q
    |||||||||||| |||||||| |||||||||||||||    
T  31973 ctcagttgatagggacaatgcataatatatgcaaggt 31937  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 119564 - 119612
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||| |||||||||||||||| |||||||  |||||| |||||    
T  119564 tcctcgtgagcttaactcagttgatagggacaatgtataatatttgcaa 119612  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 239802 - 239850
Alignment:
Q  313 tcctcgtgagtttaactcagttgatagagacaatgcgtaatatatgcaa 361  Q
    |||||||||||||| |||||||| ||  |||||||| ||||||||||||    
T  239802 tcctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaa 239850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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