View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9596_low_16 (Length: 217)
Name: NF9596_low_16
Description: NF9596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9596_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 41367233 - 41367088
Alignment:
| Q |
17 |
aaggtccctaagaacacaataattattgcaaaaattaccaagataggattggggcaaaaatttacccctttcatatccaccaactcttctaccttaacca |
116 |
Q |
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| T |
41367233 |
aaggtccctaagaacacaataattattgcaaaaattaccaagataggattggtgcaaaaatttacccctttcatatccaccaactcttctaccttaacca |
41367134 |
T |
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| Q |
117 |
tgtccctcaggattaatatcctcatcaaatttctcttattccttaa |
162 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
41367133 |
tgtccctcaggattaatatcctcatcaaattactcttattccttaa |
41367088 |
T |
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