View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9596_low_5 (Length: 346)
Name: NF9596_low_5
Description: NF9596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9596_low_5 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0288 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 336
Target Start/End: Complemental strand, 3744 - 3427
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
3744 |
gcctcatcttctttcctttctctcccaccgtcaattcattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaatctccca |
3645 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3644 |
ttcgttgcaaataaatctacagtttgttggctgatcaccaaagaatggccaacaaagcattggtactccagcgcatatgctttcagtggttgaattccat |
3545 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3544 |
ccacaatgagtcaagaatccaccaattgaagggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttcattctcaa |
3445 |
T |
|
| Q |
319 |
attctaatgacagaataa |
336 |
Q |
| |
|
||||| |||||| ||||| |
|
|
| T |
3444 |
attctgatgacaaaataa |
3427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 19 - 336
Target Start/End: Original strand, 4461230 - 4461547
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||| ||||| | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4461230 |
gcctcatcttctttccaatctctccaaccatcaattcgttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaatctccca |
4461329 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
|| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4461330 |
tttgttgcaaataaatctacagtttgctggctgatcaccaaagaatggccaacacaacatcggcactccagcacatatgctttcagtggttgaattccat |
4461429 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
4461430 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattcacaa |
4461529 |
T |
|
| Q |
319 |
attctaatgacagaataa |
336 |
Q |
| |
|
| || |||||| ||||| |
|
|
| T |
4461530 |
actcagatgacaaaataa |
4461547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 4469911 - 4470204
Alignment:
| Q |
20 |
cctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccat |
119 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4469911 |
cctcatcttctttccattctctccaaccatcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatctcccat |
4470010 |
T |
|
| Q |
120 |
tcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatc |
219 |
Q |
| |
|
|| |||||||||| |||||| |||| | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4470011 |
tcattgcaaataaatctacaatttgctagctgatcaccaaagaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatc |
4470110 |
T |
|
| Q |
220 |
cacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcatt |
313 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||| |||| |
|
|
| T |
4470111 |
cgcaatgagtcaagaatccaccgattgaagggtggttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaattccatt |
4470204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 30 - 310
Target Start/End: Complemental strand, 4267180 - 4266900
Alignment:
| Q |
30 |
tttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattcgttgcaaa |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||| | ||| |||||| ||||||||||||||||| | ||||| |
|
|
| T |
4267180 |
tttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatctcccattcatagcaaa |
4267081 |
T |
|
| Q |
130 |
taattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatccacaatgagt |
229 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4267080 |
taaatctacagtttgttggctgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgaattccatccgcaatgagt |
4266981 |
T |
|
| Q |
230 |
caagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttc |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||| |||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
4266980 |
caagaatccaccaatcgaagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaatttc |
4266900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 319
Target Start/End: Complemental strand, 4515145 - 4514846
Alignment:
| Q |
20 |
cctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccat |
119 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||| |||||||||| | |||||||||||| |
|
|
| T |
4515145 |
cctcattttatttcctttctctcccaccatcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaatctcccat |
4515046 |
T |
|
| Q |
120 |
tcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatc |
219 |
Q |
| |
|
|| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
4515045 |
tcattgcaaataaatctacagtttgttggttgatcaccaaagaattgccaacaaagcattggcactccagcgcatatgctctcagtggttgagttccatc |
4514946 |
T |
|
| Q |
220 |
cacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaaa |
319 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||| |||||||||| |||| |
|
|
| T |
4514945 |
cgcaatgagtcaagaatccgccaattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaatttcattcacaaa |
4514846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 315
Target Start/End: Original strand, 4585743 - 4586039
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||| | || | ||| | ||||||||||| |
|
|
| T |
4585743 |
gcctcatcttctttccattctctcccaccatcaattcattgaccaacttctccacctcctctctcttcacattggtgtcaacttccatcccaatctccca |
4585842 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
4585843 |
ttcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccat |
4585942 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattct |
315 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| |||||| ||||| || ||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
4585943 |
ccacagtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttcattct |
4586039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 20 - 319
Target Start/End: Original strand, 4592339 - 4592638
Alignment:
| Q |
20 |
cctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccat |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |||| |||| ||||| | |||||||||||| |
|
|
| T |
4592339 |
cctcatcttctttcctttctctcccaccatcaattcattgataagtttctccacctcctctctctttacattcgtatcaatttccatcccaatctcccat |
4592438 |
T |
|
| Q |
120 |
tcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatc |
219 |
Q |
| |
|
|| ||| |||||| ||||||||||||||||||||||| ||||||||||||||| | |||||| | |||||| ||||| |||||||||||||| ||||||| |
|
|
| T |
4592439 |
tcattgtaaataagtctacagtttgttggctgatcactaaagaatggccaacacaacattggaattccagcacatatactttcagtggttgagttccatc |
4592538 |
T |
|
| Q |
220 |
cacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaaa |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | |||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||| |||| |
|
|
| T |
4592539 |
cacaatgagtcaagaatccaccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattcacaaa |
4592638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 23 - 319
Target Start/End: Original strand, 4563822 - 4564118
Alignment:
| Q |
23 |
catcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattcg |
122 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| || ||||||||||| |||||||| |||| |||||||||| | |||||||||||||| |
|
|
| T |
4563822 |
catcttctttcctttctctcctgacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattca |
4563921 |
T |
|
| Q |
123 |
ttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatccac |
222 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| |||||||||||||||||||| |||||||| | |
|
|
| T |
4563922 |
ttgtaaataagtctacagtttgttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgc |
4564021 |
T |
|
| Q |
223 |
aatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaaa |
319 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||| ||||| |||| |||||||||||||||||||||| |||| |
|
|
| T |
4564022 |
aatgagtcaagaatccgccaattgaagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaa |
4564118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 330
Target Start/End: Complemental strand, 4613743 - 4613432
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| | || ||||| | ||||| ||||| |
|
|
| T |
4613743 |
gcctcattttctttcctttctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttccca |
4613644 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| ||||| ||| ||| ||||||| ||||||||| | || ||||||||||| | ||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
4613643 |
ttcattgcatatatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccat |
4613544 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| | |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
4613543 |
ccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattcacaa |
4613444 |
T |
|
| Q |
319 |
attctaatgaca |
330 |
Q |
| |
|
| ||| |||||| |
|
|
| T |
4613443 |
actctgatgaca |
4613432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 33 - 319
Target Start/End: Original strand, 4457715 - 4458001
Alignment:
| Q |
33 |
cctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattcgttgcaaataa |
132 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||| | |||||||| ||||| |||||||||| |
|
|
| T |
4457715 |
cctttttctcccaccatcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaataa |
4457814 |
T |
|
| Q |
133 |
ttctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaa |
232 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
4457815 |
atctacaacttgttggcttatcaccaaagaatggccaacgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaa |
4457914 |
T |
|
| Q |
233 |
gaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaaa |
319 |
Q |
| |
|
|||||| || |||||||||||||||| |||| |||||||||||||| ||||| |||| ||||||||| ||| |||||||| |||| |
|
|
| T |
4457915 |
gaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatcagaagtttcattcacaaa |
4458001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 22 - 310
Target Start/End: Original strand, 4480803 - 4481091
Alignment:
| Q |
22 |
tcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattc |
121 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| || | ||||||| || ||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
4480803 |
tcatcttctttcctttctctcccaccaacaattcattgattaacctctccacatcttctctcttcacattggtatcgatttcgagtccaatctcccattc |
4480902 |
T |
|
| Q |
122 |
gttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatcca |
221 |
Q |
| |
|
|||||||||||||||| ||| | ||||||||| |||||||||||||||| | ||||||||||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
4480903 |
attgcaaataattctacggttaggtggctgatcggcaaagaatggccaacacaacattggcactccagcacatacactttcagtggttgagttccatccg |
4481002 |
T |
|
| Q |
222 |
caatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttc |
310 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||| ||||||||| |
|
|
| T |
4481003 |
caatgagtcaagaatccgccgattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatttgaaatttc |
4481091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 4626058 - 4626358
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||||||||| || ||||| |||||||| |||||| || ||||| ||| | || |||||||||| ||||||||| | |||||||||||| |
|
|
| T |
4626058 |
gcctcatcttctttccgttatctcctgccatcaatgcattgatcagtttctctaccccctccctcttcacattagcatcgatttccattccaatctccca |
4626157 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| ||||||||| |||||| ||||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
4626158 |
ttcattgcaaatatatctacaatttgttggctgatcagcaaaatttggccaacacagcattggaactccagcgcatatgctttcaatggttgagttccat |
4626257 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4626258 |
ccacaatgagttaagaatccaccaattgaaggatggttcagtactttctcttgcggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
4626357 |
T |
|
| Q |
319 |
a |
319 |
Q |
| |
|
| |
|
|
| T |
4626358 |
a |
4626358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 4505965 - 4506258
Alignment:
| Q |
20 |
cctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccat |
119 |
Q |
| |
|
||||||||| |||||||||||||| ||||| | ||||| ||| |||||||| || | ||||| ||||||| |||| ||||| | |||||||||| || |
|
|
| T |
4505965 |
cctcatcttgtttcctttctctccaaccataatttcatcgaccagcttctctacattttctctattcacattagtatcaatttcgattccaatctccaat |
4506064 |
T |
|
| Q |
120 |
tcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatc |
219 |
Q |
| |
|
|| |||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4506065 |
tcattgcaaataaatctacagtttgttggttgatcaccaaagaacggccaacacagcattggcactccagcgcatatgctttcagtggttgagttccatc |
4506164 |
T |
|
| Q |
220 |
cacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcatt |
313 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| || | |||| ||||||| |||||||||||| || |||| |||||||||||||||||| |
|
|
| T |
4506165 |
cgcaatgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgctataaggcttctatctgaaatttcatt |
4506258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 21 - 336
Target Start/End: Original strand, 4622251 - 4622566
Alignment:
| Q |
21 |
ctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccatt |
120 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||| || ||| |||||| ||||| ||||||| ||| |||||| | ||||||||||||| |
|
|
| T |
4622251 |
ctcatcttctttcctttatctcccgacatcaattcattgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatg |
4622350 |
T |
|
| Q |
121 |
cgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatcc |
220 |
Q |
| |
|
||||| ||| |||||||||||||||||||||| | || ||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
4622351 |
aattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatcc |
4622450 |
T |
|
| Q |
221 |
acaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaaat |
320 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| | |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4622451 |
acaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaac |
4622550 |
T |
|
| Q |
321 |
tctaatgacagaataa |
336 |
Q |
| |
|
|| |||||| ||||| |
|
|
| T |
4622551 |
tcagatgacaaaataa |
4622566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 4601896 - 4602190
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||||||||| ||||| ||||| | |||| |||||||| |||||| ||| ||| ||||||||||||| | |||||||||| | ||||||||||| |
|
|
| T |
4601896 |
gcctcatcttcttgcctttatctccggctatcacttcattgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaatctccca |
4601995 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| || ||||||| ||||||||||||||||||||| |||| || |||||||| | ||| ||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
4601996 |
ttcattacaaataaatctacagtttgttggctgatcggcaaaaaaaggccaacacaacatcggcactccagcacatatgctttcagtggttgagttccat |
4602095 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcatt |
313 |
Q |
| |
|
|||||||||||||||||||| || || ||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
4602096 |
ccacaatgagtcaagaatccgccgatcgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcatt |
4602190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 19 - 336
Target Start/End: Complemental strand, 4260179 - 4259862
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||||||||||| ||||| ||| | |||||||| |||||| ||||||||||||| ||||||| ||| ||||||| |||||||||||| |
|
|
| T |
4260179 |
gcctcatcttctttccttcttctcctgacataatttcattgatcagcttcgccacctcatctcttttcacattagtattaatttcaattccaatctccca |
4260080 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||| |||| ||||||||||| | |||||| ||| | || || ||||||||| ||||||| |||||| |
|
|
| T |
4260079 |
ttcgttacaaataaatctacagtttgttggctgatcagcaaaaaatggccaacacaacattggaacttcggcacaaatgctttcaatggttgagttccat |
4259980 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
|| |||||||| ||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||| |||||| |
|
|
| T |
4259979 |
ccgcaatgagttaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaa |
4259880 |
T |
|
| Q |
319 |
attctaatgacagaataa |
336 |
Q |
| |
|
| || |||||| ||||| |
|
|
| T |
4259879 |
actcagatgacaaaataa |
4259862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 19 - 306
Target Start/End: Complemental strand, 4256637 - 4256349
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||||| || ||||||||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
4256637 |
gcctcatcttctttcctttttctcccgacatcaattcattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatctccca |
4256538 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttgg-ctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattcca |
217 |
Q |
| |
|
|||| | ||||||| ||||||||||||||| ||||||| |||| ||||||||||| | |||||| ||||| || || ||||||||| ||||||| ||||| |
|
|
| T |
4256537 |
ttcgctacaaataaatctacagtttgttggtctgatcagcaaaaaatggccaacacaacattggaactccggcacaaatgctttcaatggttgagttcca |
4256438 |
T |
|
| Q |
218 |
tccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaa |
306 |
Q |
| |
|
||| |||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||| || ||||||| |||||||| |||| |
|
|
| T |
4256437 |
tcctcaatgagtcaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccaactctcgattagtcctctatccgaaa |
4256349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 23 - 313
Target Start/End: Original strand, 4557236 - 4557526
Alignment:
| Q |
23 |
catcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattcg |
122 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||| | ||||| ||||||||||||||||||| | || ||||| | |||||||||||| |
|
|
| T |
4557236 |
catcttctttcctttctccccctccatcaattcattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatctcccatgta |
4557335 |
T |
|
| Q |
123 |
ttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatccac |
222 |
Q |
| |
|
||||||||| ||| ||||||| |||||||||| |||| ||||||||||| | |||||| |||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
4557336 |
ttgcaaatatatctgcagtttgctggctgatcagcaaaaaatggccaacacaacattggaactccagcagatatgctttcagtggttgagttccatccac |
4557435 |
T |
|
| Q |
223 |
aatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcatt |
313 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| | |||||| ||||| || ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4557436 |
aatgagtcaagaatccaccaattgaaggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttcatt |
4557526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 4579539 - 4579839
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||||||||||| | |||||||||| |||||| | ||| |
|
|
| T |
4579539 |
gcctcatcttctttgctttctctcccaccatcaattcattaaccagcttctccacctcctctctcttcacattagtgtcgatttcaattccaattttcca |
4579638 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
| ||||| | | ||| ||| || ||| |||||| | || ||||||||||| | |||||| |||||||| |||||||||||||| |||| |||||| |
|
|
| T |
4579639 |
tgtattgcataaatatctgcagcttactgggtgatcagcgaaaaatggccaacacaacattggaactccagcagatatgctttcagtgattgagttccat |
4579738 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||| ||| |
|
|
| T |
4579739 |
ccgcaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattcacaa |
4579838 |
T |
|
| Q |
319 |
a |
319 |
Q |
| |
|
| |
|
|
| T |
4579839 |
a |
4579839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 19 - 310
Target Start/End: Original strand, 4574415 - 4574706
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||| || ||||| |||| |||||||||| |||||||||||| |
|
|
| T |
4574415 |
gcctcatcttctttcctttatctccggacatcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctccca |
4574514 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| ||||||||| ||| ||||||| ||||||||| ||| ||||||||||| | |||||| |||||||| |||||||||||||||||||| |||||| |
|
|
| T |
4574515 |
ttcattgcaaatatatctgcagtttgctggctgatccgaaaaaaatggccaacataacattggaactccagcacatatgctttcagtggttgagttccat |
4574614 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttc |
310 |
Q |
| |
|
|| |||||||||||||||||||| | |||| ||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
4574615 |
ccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttc |
4574706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 22 - 313
Target Start/End: Original strand, 4617132 - 4617423
Alignment:
| Q |
22 |
tcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattc |
121 |
Q |
| |
|
|||| ||||||||||| ||||| | |||| |||||||| ||||| ||| ||| ||||||||||||| |||||||||| | |||||||||||||| |
|
|
| T |
4617132 |
tcattttctttcctttatctccggctatcacttcattgatcagctttgccaactcctctctcttcacattcgtatcgatttccataccaatctcccattc |
4617231 |
T |
|
| Q |
122 |
gttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatcca |
221 |
Q |
| |
|
|| ||||||| |||||||| ||||||||| || |||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4617232 |
attacaaataaatctacagtctgttggctggtcggcaaaaaatggccaacacaacattggcactccagcgcatatactttcagtggttgaattccatccg |
4617331 |
T |
|
| Q |
222 |
caatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcatt |
313 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
4617332 |
caatgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtggacaccaacttgctattaggcctctatctgcaatttcatt |
4617423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 19 - 310
Target Start/End: Complemental strand, 4490380 - 4490089
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||| |||| |||| |||| | ||||||||||| |
|
|
| T |
4490380 |
gcctcatcttctttcctttctctcccaccatcaattcattgatcagtttctctacctcttctctctttacattggtatcaattttcatcccaatctccca |
4490281 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| | |||||||||||||| | | ||| |||||| |||| ||||||||||| | ||||||||||||||| ||||| || || || |||| |||||| |
|
|
| T |
4490280 |
ttcttcgcaaataattctactgctaagtggttgatcagcaaaaaatggccaacacaacattggcactccagcacatatactctccatgattgagttccat |
4490181 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||| | |||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
4490180 |
ccacaatgagtcaagaatccaccaattgaagggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttc |
4490089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 19 - 310
Target Start/End: Original strand, 4560613 - 4560904
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||| || |||||||| || || ||||| |||| | |||| ||||| |||||||| ||| |
|
|
| T |
4560613 |
gcctcatcttctttcctttatctcaggacatcaattcattgaccagtttctccacgtcctccctctttacatttgtatcaatttcgtttccaatcttcca |
4560712 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| ||||||||| ||| ||||||| ||||||||| |||| ||||||||||| | |||||| |||||||| |||||||||||||||||||| |||||| |
|
|
| T |
4560713 |
ttcattgcaaatatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccat |
4560812 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttc |
310 |
Q |
| |
|
|| |||||||||||||||||||| | ||| |||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
4560813 |
ccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttc |
4560904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 319
Target Start/End: Original strand, 4571080 - 4571379
Alignment:
| Q |
20 |
cctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccat |
119 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||| | ||||||||||||| |
|
|
| T |
4571080 |
cctcatcttctttcctttatctcccaccatcaattcattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatctcccat |
4571179 |
T |
|
| Q |
120 |
tcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatc |
219 |
Q |
| |
|
||||| ||| ||||||||||| |||||||||| |||| |||||| |||| | |||||| ||||||| |||||||||| || ||||| ||||||| |
|
|
| T |
4571180 |
gtattgcagatatatctacagtttgctggctgatcagcaaaaaatggctaacacaacattggaactccagtagatatgctttcggtcgttgagttccatc |
4571279 |
T |
|
| Q |
220 |
cacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaaa |
319 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| ||||||| ||||| ||||| | ||||| | || ||||||||||||||||||||||||||| |||| |
|
|
| T |
4571280 |
cacagtgagtcaagaaaccaccaattgaaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattcacaaa |
4571379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 20 - 303
Target Start/End: Original strand, 4493063 - 4493346
Alignment:
| Q |
20 |
cctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccat |
119 |
Q |
| |
|
||||||||| |||||||||||||| ||||| | |||||||| || |||||||| | ||||| || |||| ||||||||||| | |||||||||| || |
|
|
| T |
4493063 |
cctcatcttgtttcctttctctccaaccataatctcattgaccagattctccacattttctctattaacattcctatcgatttctactccaatctccaat |
4493162 |
T |
|
| Q |
120 |
tcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatc |
219 |
Q |
| |
|
|| |||||||| | ||||||||||||||||||||||| |||||| |||||||| | |||||||||||| || |||||| ||| || ||||| ||||||| |
|
|
| T |
4493163 |
tcattgcaaatcaatctacagtttgttggctgatcactaaagaaaggccaacacaacattggcactccggcacatatgtttttggtagttgagttccatc |
4493262 |
T |
|
| Q |
220 |
cacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctg |
303 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||| | || |||||||||||||| || || |||||||||||||||| |
|
|
| T |
4493263 |
cacaatgagtcaagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 336
Target Start/End: Original strand, 4516428 - 4516745
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||| ||||| |||||||||||| |
|
|
| T |
4516428 |
gcctcatcttctttcctttatctcccaccattaattcattgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaatctccca |
4516527 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| ||||||||| ||| || ||||||||||| ||| |||| || |||||||| | |||||| ||||| || || |||||||| | || || |||||| |
|
|
| T |
4516528 |
ttcattgcaaatatatctgcaatttgttggctgctcagcaaaaaaaggccaacacaacattggtactccggcacagatgctttccattgtggagttccat |
4516627 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
|||||||||||||||||||| |||| |||||| ||||||| |||| ||||| |||||||||||||| |||| ||||||||| ||| |||||||| ||| |
|
|
| T |
4516628 |
ccacaatgagtcaagaatcctccaactgaaggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagtttcattcacaa |
4516727 |
T |
|
| Q |
319 |
attctaatgacagaataa |
336 |
Q |
| |
|
| || |||||| ||||| |
|
|
| T |
4516728 |
aatcggatgacaaaataa |
4516745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 3171848 - 3172148
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||| ||||||| |||| |||| ||||| | ||||||| ||| |
|
|
| T |
3171848 |
gcctcatcttctttcctttctctcccaccatcaattcgttgatcagtttctctacctcccctctctttacattggtatcaatttccatcccaatcttcca |
3171947 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| | |||||||||||||| ||| | ||| |||||| |||| ||||||| ||| | |||||||| |||||| |||| ||||| |||||||| |||||| |
|
|
| T |
3171948 |
ttcttggcaaataattctactgttaggtggttgatcagcaaaaaatggcctacacaacattggcattccagcacatacactttccgtggttgagttccat |
3172047 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
|| || |||||||||||||| ||||||||||| ||||||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
3172048 |
ccgcagtgagtcaagaatccgccaattgaaggatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattcacaa |
3172147 |
T |
|
| Q |
319 |
a |
319 |
Q |
| |
|
| |
|
|
| T |
3172148 |
a |
3172148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 4598278 - 4598578
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||| ||||||||||| |||||| ||||||||| ||||| |||||||||||||| ||||||||||||| | || |||| | |||||||||||| |
|
|
| T |
4598278 |
gcctcattttctttcctttatctcccgacatcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattttgattccaatctccca |
4598377 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| ||||||||| ||| ||||| | | ||||||| | || || || ||||| | |||||||||||| || ||||| |||||||||||||| |||||| |
|
|
| T |
4598378 |
ttcattgcaaatatatctgcagttggcttgctgatccgcgaaaaagggacaacacaacattggcactccggcacatatactttcagtggttgagttccat |
4598477 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
|| |||||||| |||||||||||||||||||| ||||| | |||||| ||||| ||||||||||||| | || |||||||||||||||||||||| ||| |
|
|
| T |
4598478 |
ccgcaatgagttaagaatccaccaattgaaggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaatttcattcacaa |
4598577 |
T |
|
| Q |
319 |
a |
319 |
Q |
| |
|
| |
|
|
| T |
4598578 |
a |
4598578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 4299673 - 4299529
Alignment:
| Q |
192 |
catatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgatta |
291 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggtta |
4299574 |
T |
|
| Q |
292 |
ggcctctatctgaaatttcattctcaaattctaatgacagaataa |
336 |
Q |
| |
|
||||||||| |||||||||||||||||| || |||||| ||||| |
|
|
| T |
4299573 |
ggcctctatttgaaatttcattctcaaactcagatgacaaaataa |
4299529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 336
Target Start/End: Original strand, 4568163 - 4568480
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||| | |||||||||||||| ||||||||||||| | |||| ||||| | ||| |||||| | |
|
|
| T |
4568163 |
gcctcatcttttttcctttctgtcccaccattaattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttcgattccgatctccaa |
4568262 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
| || |||||| ||| |||| ||||||||| ||| ||| || |||||||| | |||||| |||| || || |||||||| || || |||||| |
|
|
| T |
4568263 |
cttattacaaatatatctgcagtatgttggctgctcagaaaaaaaaggccaacataacattggtactctggcacaaatgctttccaatgtggagttccat |
4568362 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||| ||||| ||||| |||||||||||||| ||| |||||||||| ||| || ||||| ||| |
|
|
| T |
4568363 |
ccacaatgagtcaagaatcgtccaactgaagggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttccattcacaa |
4568462 |
T |
|
| Q |
319 |
attctaatgacagaataa |
336 |
Q |
| |
|
| || |||||| ||||| |
|
|
| T |
4568463 |
actcggatgacaaaataa |
4568480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 319
Target Start/End: Complemental strand, 4504422 - 4504122
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | || ||||| ||||| ||||||| |||| ||| || | | ||||||||||| |
|
|
| T |
4504422 |
gcctcatcttctttcctttctctcccaccatcaattcattaataagtttctctacctcttctctctgtacattggcatcaatcttcatcccaatctccca |
4504323 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| | ||||||||| | | || |||||||||| ||| ||||||||||| | ||||||||||||||| || | |||||||||||||| |||||| |
|
|
| T |
4504322 |
ttcttcgcaaataatgttgctattaagtggctgatcagaaaaaaatggccaacacaacattggcactccagcacaaacactttcagtggttgagttccat |
4504223 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||| ||||| | || ||||||| ||| |||||||| ||| |
|
|
| T |
4504222 |
ccacaatgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattcacaa |
4504123 |
T |
|
| Q |
319 |
a |
319 |
Q |
| |
|
| |
|
|
| T |
4504122 |
a |
4504122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 4299769 - 4299671
Alignment:
| Q |
21 |
ctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccat |
119 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||| ||||| |||||||| |||||| |||||| | |||||||||| | ||||||||||||| |
|
|
| T |
4299769 |
ctcatcttatctcctttctctcccaccatcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatctcccat |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 317
Target Start/End: Complemental strand, 4391976 - 4391850
Alignment:
| Q |
195 |
atgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcga----tt |
290 |
Q |
| |
|
||||||||| ||| ||| || ||||||||||| || |||||||||| |||| |||||||||||| |||||| |||| |||||||| ||||||| | |
|
|
| T |
4391976 |
atgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcggacaccatcttgcgactagat |
4391877 |
T |
|
| Q |
291 |
aggcctctatctgaaatttcattctca |
317 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
4391876 |
agacctctatctgaaatttcattctca |
4391850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 181; Significance: 9e-98; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 22 - 306
Target Start/End: Original strand, 24103109 - 24103393
Alignment:
| Q |
22 |
tcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattc |
121 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||| |||||| || |||||||||||||||| | |||||||||| ||||||||||||||||| |
|
|
| T |
24103109 |
tcatcgtctttccgttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaatctcccattc |
24103208 |
T |
|
| Q |
122 |
gttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatcca |
221 |
Q |
| |
|
| |||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
24103209 |
atagcaaataaatctacagtttgttggttgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccg |
24103308 |
T |
|
| Q |
222 |
caatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaa |
306 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
24103309 |
caatgagtcaagaatccaccaatcgaagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaa |
24103393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 19 - 310
Target Start/End: Complemental strand, 28000124 - 27999833
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||| |||||||||| || ||| ||||||||| |||| ||||| | ||||||| ||| |
|
|
| T |
28000124 |
gcctcatcttttttccattctctcccaccatcaattcattgataagcttctccaaatcctctatcttcacattcatatcaatttccataccaatcttcca |
28000025 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| || ||||||| |||||||||||||||||||||| |||| |||| |||||| | ||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
28000024 |
ttcattacaaataaatctacagtttgttggctgatcagcaaaaaatgaccaacacaacattggcactccagcgcatatgctttcggtggttgagttccat |
27999925 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttc |
310 |
Q |
| |
|
|| || ||||||||||| || | |||||||||||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
27999924 |
ccgcagtgagtcaagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatctgaaatttc |
27999833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 20155290 - 20155247
Alignment:
| Q |
207 |
gttgaattccatccacaatgagtcaagaatccaccaattgaagg |
250 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
20155290 |
gttgaattccatccacaatgtgtcaagaatcctccaattgaagg |
20155247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 158; Significance: 5e-84; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 19 - 336
Target Start/End: Original strand, 3086527 - 3086844
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
3086527 |
gcctcatcttctttcctttatctcccaccatcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctccca |
3086626 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
| ||||| ||| |||||||||| |||| ||||| ||| | ||||||||||| | ||||||||||||||| || ||||||| ||||| |||||| |
|
|
| T |
3086627 |
tatattgcagatatatctacagtttattggttgatctccataaaatggccaacacaacattggcactccagcaagtacgctttcaaccgttgagttccat |
3086726 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
3086727 |
ccacaatgagtcaagaatccaccaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttctcaa |
3086826 |
T |
|
| Q |
319 |
attctaatgacagaataa |
336 |
Q |
| |
|
| || |||||| ||||| |
|
|
| T |
3086827 |
actcagatgacataataa |
3086844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 41511484 - 41511442
Alignment:
| Q |
207 |
gttgaattccatccacaatgagtcaagaatccaccaattgaag |
249 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
41511484 |
gttgaattccaaccacaatgagtcaaaaatccaccaattgaag |
41511442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 48532826 - 48532780
Alignment:
| Q |
207 |
gttgaattccatccacaatgagtcaagaatccaccaattgaagggtg |
253 |
Q |
| |
|
|||||||||||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
48532826 |
gttgaattccatccacaatgtgttaagaatcctccaattgaagggtg |
48532780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 148; Significance: 5e-78; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 16686291 - 16685996
Alignment:
| Q |
20 |
cctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccat |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | || ||||| | |||||||||||| |
|
|
| T |
16686291 |
cctcatcttctttcctttctctcccaccatcaattcattgaccaatttctccacctcatctctcttcacattggtgtcaatttccatgccaatctcccat |
16686192 |
T |
|
| Q |
120 |
tcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatc |
219 |
Q |
| |
|
|| ||||||||| ||| || |||| |||||||||| |||| ||||||||||| | |||||| |||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
16686191 |
tcattgcaaatatatctgcattttgctggctgatcagcaaaaaatggccaacacaacattggaactccagcatatatactttcagtggttgagttccatc |
16686092 |
T |
|
| Q |
220 |
cacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattct |
315 |
Q |
| |
|
|||||||||| ||||||||||| |||||||| ||||| | |||||| ||||| || |||||||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
16686091 |
cacaatgagttaagaatccaccgattgaaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatctgagatttcattct |
16685996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 19 - 310
Target Start/End: Original strand, 1674333 - 1674624
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||| ||||| | ||||||| ||| |
|
|
| T |
1674333 |
gcctcatcttttttccattctctcccaccatcaattcattgataagcttctccaaaccctctctcttcacattcgtatcaatttccataccaatcttcca |
1674432 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
||| || ||||||| |||||||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1674433 |
ttcattacaaataaatctacagtttgttggctgatcagcaaaaaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccat |
1674532 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttc |
310 |
Q |
| |
|
|| || || ||||||||||| || |||||||||||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
1674533 |
ccgcagtgtgtcaagaatccgccgattgaagggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatctgaaatttc |
1674624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 19 - 319
Target Start/End: Complemental strand, 20863868 - 20863568
Alignment:
| Q |
19 |
gcctcatcttctttcctttctctcccaccatcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctccca |
118 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||| || ||| |||||||||| |||||||| |||| | || ||||| | ||||||||||| |
|
|
| T |
20863868 |
gcctcatcctccttcctttctctcccaccatcaattcatttaccagcatctccacctcctctctcttgacattggtgtcaatttcgatcccaatctccca |
20863769 |
T |
|
| Q |
119 |
ttcgttgcaaataattctacagtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccat |
218 |
Q |
| |
|
|| ||||||||| ||| |||||||| ||||||||| |||| |||||||| || | ||||||||||||||| |||||||| ||| ||||||| |||||| |
|
|
| T |
20863768 |
tttgttgcaaatgtatctgcagtttgtcggctgatcagcaaaaaatggccagcacaacattggcactccagcacatatgctctcaatggttgagttccat |
20863669 |
T |
|
| Q |
219 |
ccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaa |
318 |
Q |
| |
|
||||||||||| | ||||||||||||||||| ||||||| || | |||||||||||||| || |||||||||||||||||||||||||||||| ||| |
|
|
| T |
20863668 |
ccacaatgagttagaaatccaccaattgaaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattcacaa |
20863569 |
T |
|
| Q |
319 |
a |
319 |
Q |
| |
|
| |
|
|
| T |
20863568 |
a |
20863568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 1969181 - 1969140
Alignment:
| Q |
206 |
ggttgaattccatccacaatgagtcaagaatccaccaattga |
247 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1969181 |
ggttgaattccagccacaatgagtcaagaatccaccaattga |
1969140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 1281250 - 1281521
Alignment:
| Q |
48 |
atcaattcattgactagcttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattcgttgcaaataattctacagtttgttg |
147 |
Q |
| |
|
||||||||||||| | ||| ||||||| ||||||||||||| | |||||||||| | ||||||| |||||| || ||||||| |||||||| ||||| |
|
|
| T |
1281250 |
atcaattcattgatcaacttagccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg |
1281349 |
T |
|
| Q |
148 |
gctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattga |
247 |
Q |
| |
|
|||||||| |||| ||||||||||| | ||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |
|
|
| T |
1281350 |
gctgatcagcaaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattga |
1281449 |
T |
|
| Q |
248 |
agggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaaa |
319 |
Q |
| |
|
||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
1281450 |
agggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcgcaaa |
1281521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 139 - 336
Target Start/End: Complemental strand, 4591 - 4394
Alignment:
| Q |
139 |
agtttgttggctgatcaccaaagaatggccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatcc |
238 |
Q |
| |
|
|||||||||||||||| | || ||||||||||| | |||||||||||| | |||||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4591 |
agtttgttggctgatcggcgaaaaatggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatcc |
4492 |
T |
|
| Q |
239 |
accaattgaagggtggttcagtacttgttcttgtggacaccagcttgcgattaggcctctatctgaaatttcattctcaaattctaatgacagaataa |
336 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| || |||||| ||||| |
|
|
| T |
4491 |
accaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatgacaaaataa |
4394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 3662 - 3428
Alignment:
| Q |
66 |
ttctccacctcatctctcttcacatctctatcgatttcaagtccaatctcccattcgttgcaaataattctacagtttgttggctgatcaccaaagaatg |
165 |
Q |
| |
|
||||||||||| ||||||||||||| ||| |||||| ||||||||||||||| || ||||| |||||||||||||| || || || |||| |
|
|
| T |
3662 |
ttctccacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaatgcatctacagtttgttgagtgttcggggaaaaatg |
3563 |
T |
|
| Q |
166 |
gccaacaaagcattggcactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggttcagtacttg |
265 |
Q |
| |
|
|||||| |||||||| ||||||| || ||||||||| ||||||| ||||||||||||||||| ||||||||||||| | |||||||||||| ||||| |
|
|
| T |
3562 |
gccaacgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaacacttg |
3464 |
T |
|
| Q |
266 |
ttcttgtggacaccagcttgcgattaggcctctatc |
301 |
Q |
| |
|
|||| |||||||| ||||||| ||||||| |||| |
|
|
| T |
3463 |
ctcttacggacaccatcttgcgactaggcctatatc |
3428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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