View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9596_low_8 (Length: 329)
Name: NF9596_low_8
Description: NF9596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9596_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 35632695 - 35632386
Alignment:
| Q |
1 |
aaatccaacaaacgtcaacaaaagaattaatataatataggggtggtgggcagtgtttgacttttgtatattactgacttaatgtgatgttccattccac |
100 |
Q |
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| T |
35632695 |
aaatccaacaaacgtcaacaaaagaattaatataatataggggtggtgggcagtgtttgacttttgtatattagtgacttaatgtgatgttccattccac |
35632596 |
T |
|
| Q |
101 |
ctcccgtacggtcaaaagactcaaaacagaaaattccatcggtataaccttttgagaaggacagtcggtgattttgcaatatttgtgttgtgccctatct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35632595 |
ctcccgtacggtcaaaagactcaaaacagaaaattccgtaggtataaccttttgagaaggacagtcggtgattttgcaatatttgtgttgtgccctatct |
35632496 |
T |
|
| Q |
201 |
ttgctttgcgcgttgggttttttcttaccatgcttgctgtctttgattgctctttttggtttcatttcagtgttcacattagcctctgactaaactagta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35632495 |
ttgctttgcgcgttgggttttttcttaccatgcttgctgtctttgattgctctttttggtttcatttcagtgttcacattagcctctgactaaactagta |
35632396 |
T |
|
| Q |
301 |
attaagcagt |
310 |
Q |
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| |||||||| |
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| T |
35632395 |
agtaagcagt |
35632386 |
T |
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