View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9597_3 (Length: 435)
Name: NF9597_3
Description: NF9597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9597_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 8 - 435
Target Start/End: Original strand, 34432785 - 34433212
Alignment:
| Q |
8 |
cacagaattgattatatcggcatgagatattcataaggttcactaaacacggcacgcatccttttaatattttcttttttcatttcggtgcagtgatatt |
107 |
Q |
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| T |
34432785 |
cacagaattgattatatcggcatgagatattcataaggttcactaagcacggcacgcatccttttaatattttcttttttcatttcggtgcagtgatatt |
34432884 |
T |
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| Q |
108 |
gtccatatggcgagctacgctccactttttgtaaatgccaatgataggaggtaatttcttctgattttacttggaaatttctattaagttctaagtaaac |
207 |
Q |
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| T |
34432885 |
gtccatatggcgagttacgctccactttttgtaaatgccaatgataggaggtaatttcttctgattttacttggaaatttctattaagttctaagtaaac |
34432984 |
T |
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| Q |
208 |
tgtaccttgatttagtaccctctcgtttaaataggtaaataaatcatggaagaattgcaccttctcgacggccaaattaattaatattttgtcaatttat |
307 |
Q |
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| T |
34432985 |
tgtaccttgatttagtaccctctcgtttaaataggtaagtaaatcatggaagaattgtaccttctcgatggccaaattaattaatattttgtcaatttat |
34433084 |
T |
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| Q |
308 |
ttcttaaggtggaacccggatgcaattgtattcaactcttttcagctctatggaactcctagctactggatgcaattatttttctcagagtcaaatggag |
407 |
Q |
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| T |
34433085 |
ttcttaaggtggaacccggatgcaattgtattcaactcttttcagctctatggaactcctagctactggatgcaattatttttctcagagtcaaatggag |
34433184 |
T |
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| Q |
408 |
caacacttctgaattcatcactacaaac |
435 |
Q |
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| T |
34433185 |
caacacttctgaattcatcactacaaac |
34433212 |
T |
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