View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9597_4 (Length: 418)
Name: NF9597_4
Description: NF9597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9597_4 |
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Alignment Details
Target: chr1 (Bit Score: 295; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 30 - 393
Target Start/End: Original strand, 34327625 - 34327988
Alignment:
| Q |
30 |
ggtttttgtggataggaacaagggtccattattgctgctgttgaacctttcaagttgtttgagaaacccaactgaatgaacagcacttgtcacttccatt |
129 |
Q |
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| T |
34327625 |
ggtttttgtggataggaacaagggtccattattggtgctgttgaacctttcaagttgtttgagaaacccaactgaatgaacagcacttgtcacttccatt |
34327724 |
T |
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| Q |
130 |
tctttctacgatgtctgtgtcttgtcttccctgtttagtttttcttatacaatagtaatagtaactcttagaaatttcctattgtgttttttcttaaaac |
229 |
Q |
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| T |
34327725 |
tctttctacgatgtctgtgtcttgtcttccctgtttagtttttcttatacaatagtaatagtaactcttagaaatttcctattgtgttttttcttaaaaa |
34327824 |
T |
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| Q |
230 |
cacatgaaaaatacgtaaataccacggcaatggttaactaccattgnnnnnnntaacggttgtagttaactatcattgtgtagttaactaccgtagtgat |
329 |
Q |
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| T |
34327825 |
cacatgaaaaatatataaataccacggcgatggttaactaccattgaaagaaataccggtggtagttaactatcattgtgtagttaattaccgtagcgat |
34327924 |
T |
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| Q |
330 |
agatcttaacggtagttaactaccgttgaaatatttccataaaccattaaagacccacacccct |
393 |
Q |
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| T |
34327925 |
agatcttaacggtagttaactaccgttgagatatttccctaaaccattacagacccacacccct |
34327988 |
T |
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