View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9598_low_7 (Length: 269)
Name: NF9598_low_7
Description: NF9598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9598_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 32487794 - 32488043
Alignment:
| Q |
1 |
tcttaattaggctgcaatttttcataacatgatgattatgtcacaatatgaacaagaaataatactctgtagtgtactaagacatcaaaatatgaacaag |
100 |
Q |
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| T |
32487794 |
tcttaattaggctgcaatttttcataacatgatgattatgtcacaatatgaacaagaaataatactctgtagtgtactaagacatcaaaatatgaacaag |
32487893 |
T |
|
| Q |
101 |
aaattaaagaactgtttaggaaaatgcagtaaccaatgttggatctattgactgaggcacattaacaccaacnnnnnnnncttgatagtgacaatttata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
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| T |
32487894 |
aaattaaagaactgtttaggaaaatgcagtaaccaatgttggatctattgactgaggcacattaacaccca-aaaaaaaacttgatagtgacaatttata |
32487992 |
T |
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| Q |
201 |
gtagttggcatgaactgacctagatatatattgcacattatatgatacatg |
251 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
32487993 |
gtagttggcatgaactgacttagatatatattgcacattatatgatacatg |
32488043 |
T |
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