View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9600_8 (Length: 345)
Name: NF9600_8
Description: NF9600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9600_8 |
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Alignment Details
Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 101 - 259
Target Start/End: Complemental strand, 28191080 - 28190922
Alignment:
| Q |
101 |
aaaaatgaagaagtcatattggctataagagttaggtgtcatcttattaaaatgtagatatcacatcaatgtaaattcgtggaaaactgaattgggacta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
28191080 |
aaaaatgaagaagtcatattggctataagagttaggtgtcatcttattattaaaatgatatcacatcaatgtaaattcgtgcaaaactgaattgggacta |
28190981 |
T |
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| Q |
201 |
ccaaattgtaaagaggaaaactataagcacccaagattgctaaaaagatatgtggaacc |
259 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28190980 |
ccaaatcgtaaagaggaaaactataagcacccaagattgctaaaaagatatgtggaacc |
28190922 |
T |
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