View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9601_low_1 (Length: 364)
Name: NF9601_low_1
Description: NF9601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9601_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 16 - 329
Target Start/End: Original strand, 19137521 - 19137834
Alignment:
| Q |
16 |
acttttgccatgttggaaagatgaagaaacaaagaggatataggtgtatgtgagaaagtgtaaggaaggttcggttttggtttgtataaaaaggtaggga |
115 |
Q |
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| T |
19137521 |
acttttgccatgttggaaagttgaagaaacaaagaggatataggtgtatgtgagaaagtgtagggaaggttcggttttggtttgtataaaaaggtaggga |
19137620 |
T |
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| Q |
116 |
gaagggtgaaatggtaataagcacctaattaagaaaaagatagtggcctaaacgatagttgtgtttttgtggcatttggactttagtgggtatgaatttt |
215 |
Q |
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| T |
19137621 |
gaagggtgaaatggtaataagcacctaattaagaaaaagatagtggcctaaacgatagttgtgtttttgtggcctttggactttagtgggtgtgaatttt |
19137720 |
T |
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| Q |
216 |
gaaccgttgtttggtttgtctttgtcaacctttatatatttttctctctattattattaggtgtctctagagctctttaggaagttcttttctataatta |
315 |
Q |
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| T |
19137721 |
gaaccgttgtttggtttgtctttgtcaacctttatatatttttctctctattattattaggtgtctctcgagctctttaggaagttcttttctataatta |
19137820 |
T |
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| Q |
316 |
atgaataaatagta |
329 |
Q |
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| T |
19137821 |
atgaataaatagta |
19137834 |
T |
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