View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9601_low_18 (Length: 204)
Name: NF9601_low_18
Description: NF9601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9601_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 35254370 - 35254560
Alignment:
| Q |
2 |
atttatcacctaggaaactttttctcaattacaactattcatcattctatggcagggaactaaataaaaagtttggatacactcagttcaaactccccgg |
101 |
Q |
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| T |
35254370 |
atttatcacctaggaaactttttctcaattacaacttttcatcattctatggcagggaactaaataaaaagtttggatacactcagttcaaactccccgg |
35254469 |
T |
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| Q |
102 |
aacgaaggaacttgagaaggcatacaatgtatgtgcacatatgcttatctcattagggc----taaaaaacttgatattactgactcttca |
188 |
Q |
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| T |
35254470 |
aacgaaggaacttgagaaggcatacaatgtatgtgcacatatgcttatctcattagggctaattaaaaaacttgatattactgactcttca |
35254560 |
T |
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