View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9603_low_1 (Length: 387)
Name: NF9603_low_1
Description: NF9603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9603_low_1 |
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Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 26610987 - 26610710
Alignment:
| Q |
1 |
acatgtgcttgagtaattaactcaaccaatcatattactctttttattgctttatgatgggaccagagtatatcccaccacatgaccccaaacccattaa |
100 |
Q |
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| T |
26610987 |
acatgtgcttgagtaattaactcaaccaatcatattactctttttattgctttatgatgggaccatagtatatcccaccacatgaccccaaatccattaa |
26610888 |
T |
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| Q |
101 |
tcataagctattacagaacaaatccaccaaaataacacagggcagttacagttaggtttgaaattaaggatatactttaatatttttataggaatctacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26610887 |
tcataagctattacagaacaaatccaccaaaataacacagggcagttacagttaggtttgaaattaaggatatactttaatatttttataggaatctacc |
26610788 |
T |
|
| Q |
201 |
gtagttattatgtctttagctccctagtagatcaatggaatatctcttcaagcttaaaacatttttattgacaaataa |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26610787 |
gtagttattatgtctttagctccctagtagatcaatggaatatctcttcaagcttaaaacatttttattgacaaataa |
26610710 |
T |
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